@sebastienrousseau/dotfiles 0.2.481 → 0.2.499

package/docs/ROADMAP_legacy.md

@@ -0,0 +1,556 @@
+# Dotfiles Enhancement Roadmap
+
+## 1. Universal Configuration (Chezmoi) [COMPLETED]
+- [x] **Core Setup**: Initialize `chezmoi` and migrate `.zshrc`.
+- [x] **Templates**: Create template logic for macOS/Linux/Windows.
+- [x] **Modularization**: Break down monolithic config into `.chezmoitemplates`.
+
+## 2. Shell Environment [COMPLETED]
+- [x] **Oh-My-Zsh**: Replace with lightweight, custom modules.
+- [x] **Prompt**: Implement `starship` for cross-shell consistency.
+- [x] **Plugins**: Set up `zsh-syntax-highlighting` and `zsh-autosuggestions`.
+
+## 3. Tool Modernization [COMPLETED]
+- [x] **Replacements**:
+  - `ls` -> `eza`
+  - `cat` -> `bat`
+  - `grep` -> `ripgrep`
+  - `cd` -> `zoxide`
+- [x] **Aliases**: Create comprehensive alias sets for these new tools.
+
+## 4. Performance Optimization [COMPLETED]
+- [x] **Startup Speed**: Implement `zcompile` and lazy-loading.
+- [x] **Benchmarks**: Verify startup time is <20ms (Target achieved: <10ms).
+
+## 5. Security & Validation [COMPLETED]
+- [x] **CI/CD**: Add GitHub Actions for cross-platform testing.
+- [x] **Linting**: Ensure all scripts pass `shellcheck` and Codacy checks.
+
+## 6. Package Management [COMPLETED]
+- [x] **Manifests**: Create `run_onchange` scripts for `Brewfile` (Mac) and `apt` (Linux).
+- [x] **Automation**: Ensure packages are installed automatically on `chezmoi apply`.
+
+## 7. Cleanup & Optimization [COMPLETED]
+- [x] **Home Directory**: Archive legacy files (`.bashrc`, `Makefile`, etc.).
+- [x] **Vim Migration**: Move `.vimrc` to `chezmoi`.
+- [x] **Vim Performance**: Optimize plugin loading logic.
+
+## 8. Documentation [COMPLETED]
+- [x] **Audit**: Review README for accuracy.
+- [x] **Updates**: Add installation, update, and migration guides.
+
+## 9. Future Adaptations (from PR #60 Analysis)
+- [x] **Security Policy**: Adapt security concepts from PR #60 (e.g., `SECURITY.md`) to the new system.
+  - *Note*: Use standard `chezmoi` features (GPG) instead of custom scripts.
+- [x] **Performance Benchmarking**: Port the "startup metrics" idea from PR #60.
+  - *Plan*: Use `hyperfine` to benchmark shell startup and document results.
+- [x] **Operational Docs**: Review `OPERATIONS.md` from PR #60 and simplify for `chezmoi` workflows.
+
+## 10. Future Adaptations (from PR #59 Analysis)
+- [x] **Audit Logging**: PR #59 implemented custom file-based auditing.
+  - *Adaptation*: Evaluate `chezmoi`'s native logging or git history as a replacement. Consider a lightweight wrapper if strict compliance logging is required.
+- [x] **Input Validation**: PR #59 added strict validation for config variables.
+  - *Adaptation*: Use `chezmoi` template assertions (`{{ if not .email }}{{ fail "email required" }}{{ end }}`) to validate configuration at apply-time.
+- [x] **Robust Error Handling**: PR #59 focused on strict error traps.
+  - *Adaptation*: Ensure all `run_onchange` scripts use `set -e` and provide clear, actionable error messages on failure.
+
+## 11. Structural Optimizations (v0.2.471) [COMPLETED]
+- [x] **Semantic Organization**: Rename `dot_config/dotfiles` to `dot_config/shell` to better reflect its contents.
+- [x] **Script Installation**: Move `bin/` to `dot_local/bin/` for automatic PATH integration.
+- [x] **Cleanup**: Remove legacy `Makefile` and `package.json`.
+- [x] **Segregation**: Split `run_onchange_install_packages.sh.tmpl` into OS-specific files.
+
+
+## 13. Phase 19: Toolchain Expansion (Recommended)
+- [x] **Kubernetes**: Add `kubectl`, `helm`, `k9s` aliases and autocomplete.
+- [x] **Infrastructure as Code**: Add `terraform`/`opentofu` and `ansible` aliases.
+- [x] **Languages**: Add `go` (Go), `yarn` (JS), and `uv` (Python) support.
+- [x] **Diagnostics**: Add `nc` (netcat), `ss` (socket stats), and `jq`/`yq` (JSON/YAML) helpers.
+
+## 14. Phase 20: Intelligent Assistance
+- [x] **AI Integration**: Add CLI wrappers for LLMs (e.g., `fabric` or `gh copilot`).
+- [x] **Smart Help**: Create a `dothelp` command that indexes and searches all custom aliases/functions.
+
+## 15. Phase 21: Hardened Security [COMPLETED]
+- [x] **Secrets**: (Removed) 1Password integration removed in favor of native tooling.
+- [x] **Signing**: Automated SSH signing configuration for Git (Native).
+- [x] **YubiKey**: Zero-conf SSH Agent forwarding enabled.
+
+## 16. Phase 22: Automated Testing [COMPLETED]
+- [x] **Container CI**: Run the full dotfiles installation in a Docker container (Ubuntu/Fedora/Arch) on every PR.
+- [x] **Integration Tests**: Verify alias functionality in a live shell environment.
+
+
+## 17. Phase 23: Enterprise Core & Security (The Trust Layer) [COMPLETED]
+- [x] **SLSA Compliance**: Achieve SLSA Level 2/3 compliance for the build/release process.
+- [x] **SBOM Generation**: Automatically generate Software Bill of Materials (SPDX/CycloneDX) for every release.
+- [x] **Signed Releases**: Implement GPG/Sigstore signing for all commits, tags, and release artifacts.
+- [x] **Immutable Infrastructure**: Ensure critical configuration files are immutable in production environments.
+
+## 18. Phase 24: The Universal Installer (Zero-Dependency) [COMPLETED]
+- [x] **TUI Installer**: Create a rich Terminal User Interface installer (Bubbletea/Go) for interactive setup.
+- [x] **Zero-Dep Bootstrap**: Ensure the installer runs on a raw system with *only* `curl` and `sh` (no Python/Git required initially).
+- [x] **Teleportation**: Capability to "teleport" the entire config to a remote session (SSH) ephemerally.
+
+## 19. Phase 25: The "Gold Standard" Documentation [COMPLETED]
+- [x] **DocSite**: Update `dotfiles.github.io` (v0.2.471) with dependency cleanup and UI refresh.
+- [ ] **Man Pages**: proper `man dotfiles` integration for every custom function and alias.
+- [x] **Interactive Tour**: `dot learn` to launch an interactive guided tour of the shell environment.
+- [ ] **Localization**: i18n support structure for error messages and help text.
+
+## 20. Phase 26: OS Bundling & Compliance [COMPLETED]
+- [x] **XDG Compliance**: Strict adherence to XDG Base Directory specification for *all* config files.
+- [x] **Vendor Hooks**: Directory structure for OS vendors to drop in 'site-local' overrides (`/etc/dotfiles/defaults.d`).
+- [x] **POSIX Compliance**: Hardened shell scripts compatible with strict POSIX `sh` where performance counts.
+- [x] **Package Formats**: Generate `.deb`, `.rpm`, and `.pkg` (macOS) installers for system-wide provision.
+
+## 21. Phase 27: Self-Healing & Diagnostics [COMPLETED]
+- [x] **Health Checks**: `dot doctor` command to verify environment integrity (PATH, deps, permissions).
+- [x] **Auto-Repair**: Intelligent suggestions and auto-fixes for common divergence issues.
+- [x] **Drift Detection**: Alert user if local config has drifted from the managed state.
+
+## 22. Phase 28: Cloud-Native Bootstrapping
+- [ ] **Cloud-Init**: Generate `user-data` scripts for AWS/GCP/Azure instance bootstrapping.
+- [ ] **Container Native**: Provide a base Docker image (`sebastienrousseau/dotfiles:latest`) for devcontainers.
+- [ ] **Terraform Provider**: A custom Terraform provider to provision dotfiles state.
+- [ ] **Ephemeral Environments**: Hooks for GitHub Codespaces and GitPod.
+
+## 23. Phase 29: The "Secret Zero" Architecture
+- [ ] **Vault Integration**: Native HashiCorp Vault support for dynamic secret fetching.
+- [ ] **Secret Scanning**: Pre-commit hooks with TruffleHog/Gitleaks for high-entropy detection.
+- [ ] **Hardware Enclaves**: Support for Secure Enclave (macOS) and TPM (Linux/Windows) for key storage.
+- [ ] **OIDC Auth**: Keyless authentication for cloud services via GitHub OIDC.
+
+## 24. Phase 30: Enterprise Fleet Management
+- [ ] **MDM Profiles**: Generate `.mobileconfig` (macOS) and ADMX (Windows) for managed devices.
+- [ ] **Policy as Code**: Integrate OPA (Open Policy Agent) to enforce config constraints (e.g., "Must have MFA enabled").
+- [ ] **Remote Telemetry**: Optional, privacy-preserving telemetry to a central dashboard (Grafana/Prometheus).
+- [ ] **Role-Based Configs**: Distinct profiles for `SRE`, `Backend`, `Frontend`, `DataSci` via standard capability sets.
+
+## 25. Phase 31: Advanced Networking Plane
+- [ ] **VPN Automator**: Scripts to auto-manage WireGuard/Tailscale meshes.
+- [ ] **DNS Shield**: Local DNS-over-HTTPS (DoH) proxy setup (dnscrypt-proxy).
+- [ ] **Firewall Manager**: Abstraction layer for `ufw`, `pf`, and `nftables`.
+- [ ] **Proxy Aware**: Intelligent proxy switching based on network location.
+
+## 26. Phase 32: The "Predictive Shell" (AI v2) [COMPLETED]
+- [x] **Context Autosuggest**: Autosuggestions driven by project context (e.g., suggest `npm start` in JS repos).
+- [x] **Local LLM**: Integrate `llamafile` for offline, private "Ask my Shell" capabilities.
+- [x] **VoiceOps**: Experimental voice command integration via Whisper.
+- [x] **Error Analysis**: When a command fails, auto-query LLM for root cause and fix.
+
+## 27. Phase 33: The "Memory Layer" (History v2) [COMPLETED]
+- [x] **Atuin**: Replace Zsh history with SQLite-backed, syncable shell history.
+  - *Benefit*: End-to-end encrypted sync, search by exit code/duration.
+- [ ] **McFly**: Neural network-powered history search (alternative to fzf).
+
+## 28. Phase 34: The "Visual Layer" (TUI v2) [COMPLETED]
+- [x] **Yazi**: Rust-based terminal file manager (replaces Ranger).
+  - *Benefit*: Instant startup, image previews (Sixel/Kitty), async I/O.
+- [x] **Zellij**: Modern terminal multiplexer (replaces Tmux for new users).
+  - *Benefit*: Layout engine, floating panes, intuitive keybindings.
+- [x] **Ghostty**: Configuration for the new GPU-accelerated terminal.
+
+## 29. Phase 35: Immutable Workstations
+
+## 28. Phase 34: Cross-Compiler Toolchain
+- [ ] **Multi-Arch**: Auto-setup `qemu-user-static` for ARM64/AMD64 cross-compilation.
+- [ ] **Wasm Target**: Standardize WebAssembly toolchain (Rust/Go to Wasm) setup.
+- [ ] **Embedded Dev**: Presets for Arduino/ESP32/STM32 development.
+- [ ] **Android/iOS**: Mobile development environment presets (Flutter/React Native).
+
+## 29. Phase 35: The Plugin Ecosystem
+- [ ] **Module Registry**: A public registry/index of community-contributed dotfiles modules.
+- [ ] **Dependency Solving**: Semantic versioning and resolution for modules.
+- [ ] **Theme Exchange**: Marketplace for shell themes (Starship prompts, terminal colors).
+- [ ] **Verified Publishers**: Cryptographic signing for "Official" modules.
+
+## 30. Phase 36: Accessibility & Localization (A11y)
+- [ ] **Screen Reader**: Optimize TUI and shell outputs for screen readers.
+- [ ] **High Contrast**: Dedicated accessible themes.
+- [ ] **i18n**: Translations for all installer and help messages (ES, FR, DE, JP, CN).
+- [ ] **Dyslexie Font**: One-click setup for dyslexia-friendly fonts.
+
+## 31. Phase 37: Performance Engineering Deep-Dive
+- [ ] **Kernel Tuning**: Sysctl optimization profiles for high-throughput networks.
+- [ ] **Storage Tuning**: Filesystem mount option optimizations for SSD/NVMe.
+- [ ] **Compile Cache**: Global setup for `ccache` and `sccache`.
+- [ ] **Ramdisk**: Scripts to mount build directories to RAM for speed.
+
+## 32. Phase 38: Data Science & Engineering
+- [ ] **Conda/Mamba**: Optimized Python environment management.
+- [ ] **GPU Config**: CUDA/ROCm setup and verification scripts.
+- [ ] **Notebooks**: Jupyter/Zeppelin configuration presets.
+- [ ] **Big Data**: Local Spark/Hadoop/Kafka dev clusters via Docker Compose.
+
+## 33. Phase 39: The "Global Dashboard"
+- [ ] **Web UI**: A local web server (`localhost:8080`) to manage config visually.
+- [ ] **System Status**: Real-time resource usage, battery, and network stats.
+- [ ] **Git Overview**: Dashboard of status across all local git repositories.
+- [ ] **Update Manager**: Visual interface for tool updates and migration.
+
+## 34. Phase 40: Identity & Access
+- [ ] **SSH Certs**: Move from SSH keys to short-lived SSH Certificates.
+- [ ] **YubiKey Bio**: Biometric enforcement for `sudo`.
+- [ ] **PAM Modules**: Custom Pluggable Authentication Modules for strict auth.
+- [ ] **Auditd Rules**: Pre-configured audit rules for security compliance.
+
+## 35. Phase 41: Chaos Engineering (Resilience)
+- [ ] **Config Chaos**: Tool to randomly delete/corrupt config files to test recovery.
+- [ ] **Network Simulation**: Simulate high latency/packet loss for integration testing.
+- [ ] **Permission Fuzzing**: Verify system behaves correctly under strict umask/permissions.
+- [ ] **Dependency Breakage**: Simulate missing dependencies to verify error handling.
+
+## 36. Phase 42: Legacy Modernization
+- [ ] **Mainframe/Unix**: Support for AIX/Solaris/HP-UX (Legacy Unix).
+- [ ] **PowerShell Core**: First-class support for PowerShell scripts on Linux/Mac.
+- [ ] **DosBox/Wine**: Configs for running legacy Windows apps.
+- [ ] **Terminal Emulators**: Config generation for Alacritty, Kitty, WezTerm, iTerm2.
+
+## 37. Phase 43: Documentation Hub (Enterprise)
+- [ ] **Video Guides**: Auto-generated Asciinema casts for every command.
+- [ ] **Knowledge Graph**: Interactive graph visualization of alias dependencies.
+- [ ] **Glossary**: Searchable term dictionary.
+- [ ] **Architecture Records**: ADRs for every major decision.
+
+## 38. Phase 44: Hardware Specifics
+- [ ] **Keyboard Firmware**: QMK/ZMK config and flashing tools.
+- [ ] **Monitor Control**: `ddcutil` scripts for brightness/input switching.
+- [ ] **RGB Sync**: OpenRGB profiles for setup matching.
+- [ ] **Fan Control**: Fan curve optimization scripts.
+
+## 39. Phase 45: Collaboration Tools
+- [ ] **Pair Programming**: Setup for `tmate` or `ssh` pairing sessions.
+- [ ] **Team Sync**: Synchronize non-secret aliases across a team via git.
+- [ ] **GPG Web of Trust**: Tools to manage key signing parties.
+- [ ] **ChatOps**: Integrations for Slack/Discord notifications on completion of long tasks.
+
+## 40. Phase 46: Database DevOps
+- [ ] **DB Clients**: Pre-config for `psql`, `mycli`, `sqlite3`.
+- [ ] **Local DBs**: One-command ephemereal DBs (Redis, Postgres, Mongo) via Docker.
+- [ ] **Migration Tools**: Flyway/Liquibase alias integration.
+- [ ] **Data Anonymization**: Tools to sanitize prod data for local dev.
+
+## 41. Phase 47: Serverless Workflows
+- [ ] **Lambda/Functions**: Local dev environments for AWS Lambda/Azure Functions.
+- [ ] **Edge Workers**: User agents/configs for Cloudflare Workers.
+- [ ] **Wasm Edge**: Setup for running Wasm on the edge.
+- [ ] **SAM/Serverless**: Framework aliases.
+
+## 42. Phase 48: Blockchain & Web3
+- [ ] **Node Operation**: Configs for running Eth/BTC light nodes.
+- [ ] **Smart Contracts**: Hardhat/Foundry toolchain setup.
+- [ ] **Check Wallets**: CLI tools for checking balances (read-only).
+- [ ] **IPFS**: Local IPFS node configuration.
+
+## 43. Phase 49: Media & Creative
+- [ ] **FFmpeg**: The "Swiss Army Knife" alias set for video.
+- [ ] **ImageMagick**: Batch processing scripts for images.
+- [ ] **Streaming**: OBS Studio configuration and plugins.
+- [ ] **Audio**: JACK/PipeWire low-latency audio config.
+
+## 44. Phase 50: The "Meta" Phase (Self-Optimization)
+- [ ] **Analytics**: Analyze shell history to suggest new aliases for frequent commands.
+- [ ] **Cleanup**: Auto-archive unused dotfiles/repos.
+- [ ] **Speedrun**: Gamification of Setup Time (Leaderboards).
+- [ ] **Feedback Loop**: Auto-file GitHub issues on crash.
+
+## 45. Phase 51: Regulatory Compliance [COMPLETED]
+- [x] **SOC2 Mappings**: Document how configs satisfy SOC2 controls (Access/Change Mgmt).
+- [x] **HIPAA/GDPR**: Privacy mode enforcing strict data hygiene.
+- [x] **FedRAMP**: Templates for FedRAMP-compliant workstation baselines.
+- [x] **ISO 27001**: Audit trails to satisfy ISO requirements.
+
+## 46. Phase 52: Virtualization Mastery
+- [ ] **KVM/QEMU**: Optimized VM templates and launch scripts.
+- [ ] **Vagrant**: Standard Vagrantfiles for reproducing dev envs.
+- [ ] **Proxmox**: CLI tools for managing Proxmox clusters.
+- [ ] **MicroVMs**: Firecracker/Kata containers integration.
+
+## 47. Phase 53: Windows Deep Integration (WSL2+)
+- [ ] **PowerShell Profile**: Mirror Zsh functionality in pwsh.
+- [ ] **WinGet**: Declarative package management for Windows apps.
+- [ ] **Registry Hacks**: Scripts for performance/privacy registry tweaks.
+- [ ] **WSL Bridge**: Seamless interop (pbcopy/open) between Linux/Windows.
+
+## 48. Phase 54: macOS Deep Integration [COMPLETED]
+- [x] **Defaults Write**: Exhaustive macOS `defaults` configuration (Dock, Finder, Inputs).
+- [x] **LaunchAgents**: Management of user background services.
+- [x] **Homebrew Bundle**: Strict `Brewfile.lock` enforcement.
+- [x] **TouchBar**: Custom TouchBar widgets (if applicable).
+
+## 49. Phase 55: Linux Deep Integration
+- [ ] **Systemd User Units**: Management of user services via systemd.
+- [ ] **Desktop Envs**: Configs for GNOME, KDE, Sway, Hyprland.
+- [ ] **Udev Rules**: Custom hardware rules (FIDO keys, programmers).
+- [ ] **Kernel Modules**: Auto-loading of required modules (v4l2loopback, etc).
+
+## 50. Phase 56: Network Topologies
+- [ ] **Mesh Networks**: Yggdrasil/IPFS setup.
+- [ ] **Onion Routing**: Tor proxy integration aliases.
+- [ ] **Private Cloud**: Scripts to bootstrap a personal VPN server.
+- [ ] **AdBlocking**: Host file / DNS blackholing updates.
+
+## 51. Phase 57: Build Systems
+- [ ] **Bazel**: User-level Bazel cache and rc setup.
+- [ ] **Maven/Gradle**: Global init scripts and properties.
+- [ ] **CMake/Meson**: Toolchain files for cross-compilation.
+- [ ] **Make**: A library of reusable Makefile includes.
+
+## 52. Phase 58: Editor Unification (The Grand Vim)
+- [ ] **NeoVim Lua**: Full migration to a Lua-based NeoVim config.
+- [ ] **Emacs Doom**: Support for Doom Emacs profile (Evil mode).
+- [ ] **Helix/Kakoune**: Configs for modal editor alternatives.
+- [ ] **LSP Universal**: Global LSP server management (Mason/null-ls).
+
+## 53. Phase 59: Font Typography [COMPLETED]
+- [x] **Nerd Fonts**: Auto-patcher and installer for Nerd Fonts.
+- [x] **Fontconfig**: Precision font rendering configuration (Next-gen).
+- [x] **Ligatures**: Code-specific ligature settings.
+- [x] **Emoji**: Custom emoji pickers and fonts.
+
+## 54. Phase 60: Terminal Emulators
+- [ ] **Alacritty**: GPU-accelerated config.
+- [ ] **Kitty**: Advanced kitten plugins and graphics protocol.
+- [ ] **WezTerm**: Lua-based configuration.
+- [ ] **Tmuxp/Zellij**: Layout managers for terminal workspaces.
+
+## 55. Phase 61: Browser Automation
+- [ ] **Playwright/Selenium**: Dev tools for browser automation.
+- [ ] **UserScripts**: Repository of Tampermonkey/Greasemonkey scripts.
+- [ ] **Chrome/Firefox Policies**: Managed browser policies (bookmarks, extensions).
+- [ ] **Harden**: Privacy-hardening user.js profiles.
+
+## 56. Phase 62: Email & Communication
+- [ ] **Mutt/NeoMutt**: CLI email client configuration.
+- [ ] **IRC/Matrix**: WeeChat/Irissi setup for chat protocols.
+- [ ] **Contacts**: VCard management tools (`khard`).
+- [ ] **Calendars**: CLI calendar tools (`khal`).
+
+## 57. Phase 63: Financial Operations (FinOps)
+- [ ] **Cost CLI**: Tools to check AWS/Cloud costs (`infracost`).
+- [ ] **Ledger**: Plain text accounting (`ledger-cli`/`hledger`) config.
+- [ ] **Stock Ticker**: Terminal stock tickers (`mop`).
+- [ ] **Crypto**: CLI tools for portfolio tracking.
+
+## 58. Phase 64: Game Development
+- [ ] **Unity/Unreal**: CLI tools for engine management.
+- [ ] **Godot**: GDScript and export templates.
+- [ ] **Asset Pipeline**: Texture compression/audio conversion scripts.
+- [ ] **Blender**: Headless rendering scripts.
+
+## 59. Phase 65: Mobile Device Management (Personal)
+- [ ] **Adb/Fastboot**: Android debugging presets.
+- [ ] **Scrcpy**: Screen mirroring optimization.
+- [ ] **iOS Deploy**: Tools for side-loading apps.
+- [ ] **Backup**: Signal/WhatsApp backup scripts.
+
+## 60. Phase 66: Home Automation
+- [ ] **Home Assistant**: CLI tools (`hass-cli`) for smart home control.
+- [ ] **MQTT**: Mosquitto pub/sub aliases.
+- [ ] **ESPHome**: Flashing and logs management.
+- [ ] **Zigbee2MQTT**: Network management tools.
+
+## 61. Phase 67: 3D Printing & CNC
+- [ ] **G-Code**: G-code viewers and manipulators in terminal.
+- [ ] **OctoPrint**: CLI control for 3D printers.
+- [ ] **Firmware**: Marlin/Klipper build environments.
+- [ ] **Slicing**: CLI slicing automation.
+
+## 62. Phase 68: Scientific Computing
+- [ ] **Latex**: Tectonic/TexLive configuration.
+- [ ] **R / Julie**: Statistical computing environments.
+- [ ] **Pandoc**: Universal document converter templates.
+- [ ] **Gnuplot**: Graphing scripts and styles.
+
+## 63. Phase 69: Quantum Computing (Future Proof)
+- [ ] **Qiskit/Cirq**: Quantum SDK setup.
+- [ ] **Simulators**: CLI quantum circuit simulators.
+- [ ] **Algorithms**: Library of basic quantum algorithms.
+- [ ] **Docs**: Quantum primer documentation.
+
+## 64. Phase 70: Bio-Informatics
+- [ ] **Genomics**: Tools for SAM/BAM file processing (`samtools`).
+- [ ] **PDB**: Protein structure viewer (CLI).
+- [ ] **FASTA**: Sequence manipulation scripts.
+- [ ] **Pipelines**: Nextflow/Snakemake configs.
+
+## 65. Phase 71: Geographic Information (GIS)
+- [ ] **GDAL/OGR**: Geospatial data conversion tools.
+- [ ] **PostGIS**: Database extensions setup.
+- [ ] **Mapnik**: CLI map rendering.
+- [ ] **OpenStreetMap**: Editors and data fetchers.
+
+## 66. Phase 72: Retro Computing
+- [ ] **Emulation**: MAME/RetroArch configs.
+- [ ] **Floppy**: Tools for writing IMG files to media.
+- [ ] **Serial**: RS-232 communication scripts (`minicom`).
+- [ ] **Cross-Asm**: 6502/Z80 assemblers.
+
+## 67. Phase 73: Radio & SDR
+- [ ] **RTL-SDR**: Drivers and frequency scanning scripts.
+- [ ] **Ham Radio**: Logbook and propagation tools.
+- [ ] **Decode**: POCSAG/APRS decoding pipelines.
+- [ ] **GnuRadio**: Headless flowgraph execution.
+
+## 68. Phase 74: Photography & Video
+- [ ] **Exif**: Batch metadata editing (`exiftool`).
+- [ ] **RAW**: Darktable/RawTherapee CLI export sidecars.
+- [ ] **Timelapse**: Assembly scripts using `ffmpeg`.
+- [ ] **YouTube-DL**: Archival scripts (`yt-dlp`).
+
+## 69. Phase 75: Music Production
+- [ ] **MIDI**: CLI MIDI routing and monitoring.
+- [ ] **Csound/SuperCollider**: Live coding environments.
+- [ ] **Sheet Music**: LilyPond engraving templates.
+- [ ] **Tagging**: MusicBrainz Picard CLI integration.
+
+## 70. Phase 76: Education & Learning
+- [ ] **Flashcards**: CLI spaced repetition system (`anki-cli`).
+- [ ] **Typing**: Typing tutors (`typespeed`).
+- [ ] **Coding Katas**: Exercism/LeetCode CLI integration.
+- [ ] **Man Pages**: Enhanced manuals (`tldr`, `cheat`).
+
+## 71. Phase 77: Weather & Environment
+- [ ] **Weather**: Terminal weather reports (`wttr.in`).
+- [ ] **Tides/Moon**: Astronomy data.
+- [ ] **Sensors**: Local hardware sensor logging (temps, fans).
+- [ ] **Sun**: Blue light filter scheduling (`redshift`).
+
+## 72. Phase 78: Productivity & Time
+- [ ] **Pomodoro**: CLI timer and status bar integration.
+- [ ] **Time Tracking**: `timewarrior` configuration.
+- [ ] **Tasks**: `taskwarrior` ecosystem setup.
+- [ ] **Journal**: CLI journaling workflow.
+
+## 73. Phase 79: System Forensics
+- [ ] **Recovery**: Disk recovery tools (`testdisk`, `ddrescue`).
+- [ ] **Analysis**: Log analysis pipelines.
+- [ ] **Metadata**: Scrubbing tools (`mat2`) for privacy.
+- [ ] **Integrity**: Tripwire-like file integrity monitoring.
+
+## 74. Phase 80: High-Performance Computing (HPC)
+- [ ] **MPI**: Message Passing Interface setup.
+- [ ] **Slurm**: Job scheduler submission templates.
+- [ ] **Singularity**: HPC container runtime config.
+- [ ] **Profiling**: Perf/eBPF profiling scripts.
+
+## 75. Phase 81: Kernel Development
+- [ ] **Kbuild**: Kernel build optimization aliases.
+- [ ] **QEMU Kernel**: Quick-boot kernels for testing.
+- [ ] **Bisect**: Automated git bisect scripts for kernel bugs.
+- [ ] **Coccinelle**: Semantic patch scripts.
+
+## 76. Phase 82: Embedded Linux (Yocto/Buildroot)
+- [ ] **BitBake**: Optimization and convenience aliases.
+- [ ] **Repo**: Google `repo` tool management.
+- [ ] **TFTP/NFS**: Boot server setup for embedded boards.
+- [ ] **DeviceTree**: Compilers and decompilers (`dtc`).
+
+## 77. Phase 83: Robotics (ROS)
+- [ ] **ROS1/ROS2**: Environment sourcing and switching.
+- [ ] **Gazebo**: Simulation launch shortcuts.
+- [ ] **Colcon**: Build tool aliases.
+- [ ] **Visualization**: Rviz config templates.
+
+## 78. Phase 84: Machine Learning Ops (MLOps)
+- [ ] **DVC**: Data Version Control setup.
+- [ ] **MLflow**: Local tracking server.
+- [ ] **TensorBoard**: Dashboard launch aliases.
+- [ ] **Model Serving**: TorchServe/TFServing local checks.
+
+## 79. Phase 85: Distributed Systems
+- [ ] **Consul/Etcd**: Local cluster for kv storage testing.
+- [ ] **Nomad**: Orchestration job templates.
+- [ ] **Chaos Mesh**: Kubernetes chaos experiments.
+- [ ] **Raft**: Consensus algorithm visualizers.
+
+## 80. Phase 86: Graph Theory
+- [ ] **Graphviz**: DOT language visualization styles.
+- [ ] **NetworkX**: Python analysis snippets.
+- [ ] **Neo4j**: Cypher query CLI tools.
+- [ ] **Gephi**: Data preparation scripts.
+
+## 81. Phase 87: Compilers & Interpreters
+- [ ] **LLVM**: Clang-format and clang-tidy global styles.
+- [ ] **GCC**: Warning level presets.
+- [ ] **Bison/Flex**: Parser generator templates.
+- [ ] **JIT**: Explorer tools for V8/HotSpot optimizations.
+
+## 82. Phase 88: Virtual Reality (VR/AR)
+- [ ] **OpenXR**: SDK setup and verification.
+- [ ] **WebXR**: Server configs for local testing.
+- [ ] **Unity XR**: Project templates.
+- [ ] **A-Frame**: Boilerplate generation.
+
+## 83. Phase 89: Pen-Testing (Red Team)
+- [ ] **Metasploit**: Database init and config.
+- [ ] **Nmap**: Scanning profile aliases.
+- [ ] **Burp Suite**: Proxy config scripts.
+- [ ] **Wordlists**: Management of dictionary files (`Seclists`).
+
+## 84. Phase 90: Blue Team (Defense)
+- [ ] **Snort/Suricata**: IDS rule management.
+- [ ] **Wazuh**: Agent configuration.
+- [ ] **Honeypots**: Local decoys for detection.
+- [ ] **SIEM**: Log forwarding to ELK/Splunk.
+
+## 85. Phase 91: Accessibility Testing
+- [ ] **Pa11y**: Automated WCAG testing.
+- [ ] **Lighthouse**: CI performance/a11y audits.
+- [ ] **Screen Reader**: Simulation tools.
+- [ ] **Contrast**: Color blindness simulators.
+
+## 86. Phase 92: Legal & Licensing [COMPLETED]
+- [x] **FOSSology**: License scanning containers.
+- [x] **Headers**: Auto-insertion of copyright headers.
+- [x] **CLA**: Contributor License Agreement checks.
+- [x] **Notice**: Attribution generation tools.
+
+## 87. Phase 93: Procurement & Vendor
+- [ ] **RFP**: Request for Proposal templates (markdown).
+- [ ] **Vendor**: Management of vendor contacts/keys.
+- [ ] **Inventory**: Asset tracking CSV tools.
+- [ ] **Invoicing**: CLI generation of PDF invoices.
+
+## 88. Phase 94: Recruiting & HR
+- [ ] **Resume**: Markdown-to-PDF resume generator.
+- [ ] **Interview**: Coding interview problem sets.
+- [ ] **Onboarding**: Scripts to setup new hire machines.
+- [ ] **Reviews**: Performance review templates.
+
+## 89. Phase 95: Event Management
+- [ ] **Schedule**: Conference schedule CLI viewers.
+- [ ] **Slides**: Reveal.js / Marp slide generators.
+- [ ] **Badges**: Badge printing scripts.
+- [ ] **Wifi**: Guest network generation QR codes.
+
+## 90. Phase 96: Travel & Logistics
+- [ ] **Timezones**: Multi-timezone clocks.
+- [ ] **Currency**: Terminal conversion tools.
+- [ ] **Maps**: ASCII map viewers.
+- [ ] **Packing**: Checklist generators.
+
+## 91. Phase 97: Health & Fitness
+- [ ] **Workouts**: Logging scripts (plain text).
+- [ ] **Diet**: Calorie tracking CLI.
+- [ ] **Quantified Self**: Data aggregation scripts.
+- [ ] **Ergonomics**: Break timers (`workrave`).
+
+## 92. Phase 98: Spirituality & Mindfulness
+- [ ] **Meditation**: Timer and gong sounds.
+- [ ] **Quotes**: Daily stoic/philosophical quotes.
+- [ ] **Journal**: Gratitude journaling prompts.
+- [ ] **Focus**: Distraction blocking hosts files.
+
+## 93. Phase 99: The Legacy (Succession)
+- [ ] **Digital Heirloom**: Archival grade storage (M-DISC compatibility).
+- [ ] **Instruction**: "Break Glass" access documentation.
+- [ ] **Legacy**: Clean handover scripts.
+- [ ] **Memorial**: Contribution history visualization.
+
+## 94. Phase 100: The Singularity (Auto-Generation)
+- [ ] **Self-Coding**: The dotfiles can rewrite themselves based on Intent.
+- [ ] **Universal Adaptor**: Works on any OS, past, present, or future (via WASM/Virtualization).
+- [ ] **Neural Interface**: CLI commands via thought (BCI integration).
+- [ ] **Complete**: The project is finished.

package/docs/SECURITY_CHECKLIST.md

@@ -4,7 +4,7 @@ Use this checklist before cutting any new release (e.g., `v0.x.x`) to ensure sup
 
 ## 1. Supply Chain & Installer
 - [ ] **Pinned Version**: Update `install.sh` `VERSION` variable to match the release tag.
-- [ ] **Docs Sync**: Ensure `README.md` and `.github/PULL_REQUEST_TEMPLATE.md` installer URLs point to the new tag (not `main`).
+- [ ] **Docs Sync**: Ensure `README.md` and `PR_DESCRIPTION.md` installer URLs point to the new tag (not `main`).
 - [ ] **Clean Build**: Verify `install.sh` does not curl random scripts from third parties without pinning.
 
 ## 2. Secrets & Leak Prevention

package/docs/TASK.md

@@ -42,7 +42,7 @@
 - [x] **CLA**: Add CLA check aliases (`check-cla`) <!-- id: 113 -->
 - [x] **Notice**: Add attribution generation (`gen-notice`) <!-- id: 114 -->
 
-# Pull Request (v0.2.480)
+# Pull Request (v0.2.471)
 - [x] Commit and push changes <!-- id: 17 -->
 - [x] Update Pull Request (Completed via gh CLI) <!-- id: 18 -->
 - [x] **Verify PR Content**: Confirmed title and description on GitHub <!-- id: 67 -->
@@ -53,7 +53,7 @@
 - [x] **Immutability**: Create script to lock/unlock critical files (`lock-configs`) <!-- id: 118 -->
 
 # Phase 27: Self-Healing & Diagnostics
-- [x] **Health Checks**: Create `dot doctor` script (`scripts/diagnostics/doctor.sh`) <!-- id: 121 -->
+- [x] **Health Checks**: Create `dot doctor` script (`scripts/doctor.sh`) <!-- id: 121 -->
 - [x] **Drift Detection**: Add `dot drift` alias for `chezmoi verify` <!-- id: 122 -->
 - [x] **Auto-Repair**: Add `dot heal` alias for interactive repair <!-- id: 123 -->
 
@@ -74,11 +74,11 @@
 # Phase 26: OS Bundling & Compliance
 - [x] **XDG**: Audit and enforce XDG Base Directory variables <!-- id: 132 -->
 - [x] **Vendor Hooks**: Implement `/etc/dotfiles/defaults.d` sourcing in shell init <!-- id: 133 -->
-- [x] **Bundling**: Create `scripts/core/package.sh` to generate release artifacts (.tar.gz, .deb structure) <!-- id: 134 -->
+- [x] **Bundling**: Create `scripts/package.sh` to generate release artifacts (.tar.gz, .deb structure) <!-- id: 134 -->
 
 # Phase 24: The Universal Installer (Zero-Dependency)
 - [x] **Installer**: Create `install.sh` (Zero-dep, TUI-like bootstrap) <!-- id: 135 -->
-- [x] **Teleport**: Create `scripts/ops/teleport.sh` to push config to remote hosts <!-- id: 136 -->
+- [x] **Teleport**: Create `scripts/teleport.sh` to push config to remote hosts <!-- id: 136 -->
 - [x] **Aliases**: Add `dot install` and `dot teleport` aliases <!-- id: 137 -->
 
 # Post-Release Hotfixes