@sayknow-cli/coding-agent 0.3.5 → 0.3.6

package/dist/types/autoresearch/state.d.ts

@@ -1,17 +0,0 @@
-import type { SessionEntry } from "../session/session-manager";
-import type { RunRow, SessionRow } from "./storage";
-import type { AutoresearchRuntime, ExperimentResult, ExperimentState, MetricDef, MetricDirection, NumericMetricMap, ReconstructedControlState, RuntimeStore } from "./types";
-export declare function createExperimentState(): ExperimentState;
-export declare function createSessionRuntime(): AutoresearchRuntime;
-export declare function cloneExperimentState(state: ExperimentState): ExperimentState;
-export declare function currentResults(results: ExperimentResult[], segment: number): ExperimentResult[];
-export declare function findBaselineResult(results: ExperimentResult[], segment: number): ExperimentResult | null;
-export declare function findBaselineMetric(results: ExperimentResult[], segment: number): number | null;
-export declare function findBestKeptMetric(results: ExperimentResult[], segment: number, direction: MetricDirection): number | null;
-export declare function findBaselineRunNumber(results: ExperimentResult[], segment: number): number | null;
-export declare function findBaselineSecondary(results: ExperimentResult[], segment: number, knownMetrics: MetricDef[]): NumericMetricMap;
-export declare function sortedMedian(values: number[]): number;
-export declare function computeConfidence(results: ExperimentResult[], segment: number, direction: MetricDirection): number | null;
-export declare function buildExperimentState(session: SessionRow, loggedRuns: RunRow[]): ExperimentState;
-export declare function reconstructControlState(entries: SessionEntry[]): ReconstructedControlState;
-export declare function createRuntimeStore(): RuntimeStore;

package/dist/types/autoresearch/storage.d.ts

@@ -1,142 +0,0 @@
-import type { ASIData, ExperimentStatus, MetricDirection, NumericMetricMap } from "./types";
-export interface SessionRow {
-    id: number;
-    name: string;
-    goal: string | null;
-    primaryMetric: string;
-    metricUnit: string;
-    direction: MetricDirection;
-    preferredCommand: string | null;
-    branch: string | null;
-    baselineCommit: string | null;
-    currentSegment: number;
-    maxIterations: number | null;
-    scopePaths: string[];
-    offLimits: string[];
-    constraints: string[];
-    secondaryMetrics: string[];
-    notes: string;
-    createdAt: number;
-    closedAt: number | null;
-}
-export interface RunRow {
-    id: number;
-    sessionId: number;
-    segment: number;
-    command: string;
-    startedAt: number;
-    completedAt: number | null;
-    durationMs: number | null;
-    exitCode: number | null;
-    timedOut: boolean;
-    parsedPrimary: number | null;
-    parsedMetrics: NumericMetricMap | null;
-    parsedAsi: ASIData | null;
-    preRunDirtyPaths: string[];
-    logPath: string;
-    status: ExperimentStatus | null;
-    description: string | null;
-    metric: number | null;
-    metrics: NumericMetricMap | null;
-    asi: ASIData | null;
-    commitHash: string | null;
-    confidence: number | null;
-    modifiedPaths: string[] | null;
-    scopeDeviations: string[] | null;
-    justification: string | null;
-    flagged: boolean;
-    flaggedReason: string | null;
-    loggedAt: number | null;
-    abandonedAt: number | null;
-}
-export interface OpenSessionParams {
-    name: string;
-    goal: string | null;
-    primaryMetric: string;
-    metricUnit: string;
-    direction: MetricDirection;
-    preferredCommand: string | null;
-    branch: string | null;
-    baselineCommit: string | null;
-    maxIterations: number | null;
-    scopePaths: string[];
-    offLimits: string[];
-    constraints: string[];
-    secondaryMetrics: string[];
-}
-export interface UpdateSessionParams {
-    goal?: string | null;
-    preferredCommand?: string | null;
-    maxIterations?: number | null;
-    scopePaths?: string[];
-    offLimits?: string[];
-    constraints?: string[];
-    secondaryMetrics?: string[];
-    primaryMetric?: string;
-    metricUnit?: string;
-    direction?: MetricDirection;
-    branch?: string | null;
-    baselineCommit?: string | null;
-    notes?: string;
-}
-export interface InsertRunParams {
-    sessionId: number;
-    segment: number;
-    command: string;
-    logPath: string;
-    preRunDirtyPaths: string[];
-    startedAt: number;
-}
-export interface MarkRunCompletedParams {
-    runId: number;
-    completedAt: number;
-    durationMs: number;
-    exitCode: number | null;
-    timedOut: boolean;
-    parsedPrimary: number | null;
-    parsedMetrics: NumericMetricMap | null;
-    parsedAsi: ASIData | null;
-}
-export interface MarkRunLoggedParams {
-    runId: number;
-    status: ExperimentStatus;
-    description: string;
-    metric: number;
-    metrics: NumericMetricMap;
-    asi: ASIData | null;
-    commitHash: string | null;
-    confidence: number | null;
-    modifiedPaths: string[];
-    scopeDeviations: string[];
-    justification: string | null;
-    loggedAt: number;
-}
-export declare class AutoresearchStorage {
-    #private;
-    constructor(dbPath: string, projectDir: string);
-    get dbPath(): string;
-    get projectDir(): string;
-    close(): void;
-    getActiveSession(): SessionRow | null;
-    getActiveSessionForBranch(branch: string | null): SessionRow | null;
-    getSessionById(sessionId: number): SessionRow | null;
-    openSession(params: OpenSessionParams): SessionRow;
-    updateSession(sessionId: number, updates: UpdateSessionParams): SessionRow;
-    bumpSegment(sessionId: number): SessionRow;
-    closeSession(sessionId: number): void;
-    insertRun(params: InsertRunParams): RunRow;
-    updateRunLogPath(runId: number, logPath: string): RunRow;
-    updateRunConfidence(runId: number, confidence: number | null): RunRow;
-    markRunCompleted(params: MarkRunCompletedParams): RunRow;
-    markRunLogged(params: MarkRunLoggedParams): RunRow;
-    flagRun(runId: number, reason: string): RunRow;
-    abandonPendingRuns(sessionId: number): number;
-    getPendingRun(sessionId: number): RunRow | null;
-    getRunById(runId: number): RunRow | null;
-    getRunByIdRequired(runId: number): RunRow;
-    listRuns(sessionId: number): RunRow[];
-    listLoggedRuns(sessionId: number): RunRow[];
-}
-export declare function openAutoresearchStorage(cwd: string): Promise<AutoresearchStorage>;
-export declare function openAutoresearchStorageIfExists(cwd: string): Promise<AutoresearchStorage | null>;
-export declare function closeAllAutoresearchStorages(): void;

package/dist/types/autoresearch/tools/init-experiment.d.ts

@@ -1,31 +0,0 @@
-import * as z from "zod/v4";
-import type { ToolDefinition } from "../../extensibility/extensions";
-import type { AutoresearchToolFactoryOptions, ExperimentState } from "../types";
-export declare const HARNESS_FILENAME = "autoresearch.sh";
-export declare const DEFAULT_HARNESS_COMMAND = "bash autoresearch.sh";
-declare const initExperimentSchema: z.ZodObject<{
-    name: z.ZodString;
-    goal: z.ZodOptional<z.ZodString>;
-    primary_metric: z.ZodString;
-    metric_unit: z.ZodOptional<z.ZodString>;
-    direction: z.ZodOptional<z.ZodEnum<{
-        higher: "higher";
-        lower: "lower";
-    }>>;
-    secondary_metrics: z.ZodOptional<z.ZodArray<z.ZodString>>;
-    scope_paths: z.ZodOptional<z.ZodArray<z.ZodString>>;
-    off_limits: z.ZodOptional<z.ZodArray<z.ZodString>>;
-    constraints: z.ZodOptional<z.ZodArray<z.ZodString>>;
-    max_iterations: z.ZodOptional<z.ZodNumber>;
-    new_segment: z.ZodOptional<z.ZodBoolean>;
-}, z.core.$strip>;
-interface InitExperimentDetails {
-    state: ExperimentState;
-    createdSession: boolean;
-    bumpedSegment: boolean;
-    abandonedRuns: number;
-    harnessCommitted: boolean;
-    baselineCommit: string | null;
-}
-export declare function createInitExperimentTool(options: AutoresearchToolFactoryOptions): ToolDefinition<typeof initExperimentSchema, InitExperimentDetails>;
-export {};

package/dist/types/autoresearch/tools/log-experiment.d.ts

@@ -1,23 +0,0 @@
-import * as z from "zod/v4";
-import type { ToolDefinition } from "../../extensibility/extensions";
-import type { AutoresearchToolFactoryOptions, LogDetails } from "../types";
-declare const logExperimentSchema: z.ZodObject<{
-    metric: z.ZodNumber;
-    status: z.ZodEnum<{
-        checks_failed: "checks_failed";
-        crash: "crash";
-        discard: "discard";
-        keep: "keep";
-    }>;
-    description: z.ZodString;
-    metrics: z.ZodOptional<z.ZodRecord<z.ZodString, z.ZodNumber>>;
-    asi: z.ZodOptional<z.ZodObject<{}, z.core.$loose>>;
-    commit: z.ZodOptional<z.ZodString>;
-    justification: z.ZodOptional<z.ZodString>;
-    flag_runs: z.ZodOptional<z.ZodArray<z.ZodObject<{
-        run_id: z.ZodNumber;
-        reason: z.ZodString;
-    }, z.core.$strip>>>;
-}, z.core.$strip>;
-export declare function createLogExperimentTool(options: AutoresearchToolFactoryOptions): ToolDefinition<typeof logExperimentSchema, LogDetails>;
-export {};

package/dist/types/autoresearch/tools/run-experiment.d.ts

@@ -1,8 +0,0 @@
-import * as z from "zod/v4";
-import type { ToolDefinition } from "../../extensibility/extensions";
-import type { AutoresearchToolFactoryOptions, RunDetails, RunExperimentProgressDetails } from "../types";
-declare const runExperimentSchema: z.ZodObject<{
-    timeout_seconds: z.ZodOptional<z.ZodNumber>;
-}, z.core.$strip>;
-export declare function createRunExperimentTool(options: AutoresearchToolFactoryOptions): ToolDefinition<typeof runExperimentSchema, RunDetails | RunExperimentProgressDetails>;
-export {};

package/dist/types/autoresearch/tools/update-notes.d.ts

@@ -1,12 +0,0 @@
-import * as z from "zod/v4";
-import type { ToolDefinition } from "../../extensibility/extensions";
-import type { AutoresearchToolFactoryOptions } from "../types";
-declare const updateNotesSchema: z.ZodObject<{
-    body: z.ZodString;
-    append_idea: z.ZodOptional<z.ZodString>;
-}, z.core.$strip>;
-interface UpdateNotesDetails {
-    notes: string;
-}
-export declare function createUpdateNotesTool(options: AutoresearchToolFactoryOptions): ToolDefinition<typeof updateNotesSchema, UpdateNotesDetails>;
-export {};

package/dist/types/autoresearch/types.d.ts

@@ -1,154 +0,0 @@
-import type { AgentToolResult } from "@sayknow-cli/agent-core";
-import type { ExtensionAPI, ExtensionContext } from "../extensibility/extensions";
-import type { SessionEntry } from "../session/session-manager";
-import type { TruncationResult } from "../session/streaming-output";
-export type MetricDirection = "lower" | "higher";
-export type ExperimentStatus = "keep" | "discard" | "crash" | "checks_failed";
-export type ASIValue = string | number | boolean | null | ASIValue[] | {
-    [key: string]: ASIValue;
-};
-export interface ASIData {
-    [key: string]: ASIValue;
-}
-export interface NumericMetricMap {
-    [key: string]: number;
-}
-export interface MetricDef {
-    name: string;
-    unit: string;
-}
-export interface ExperimentResult {
-    runNumber: number | null;
-    commit: string;
-    metric: number;
-    metrics: NumericMetricMap;
-    status: ExperimentStatus;
-    description: string;
-    timestamp: number;
-    segment: number;
-    confidence: number | null;
-    asi?: ASIData;
-    modifiedPaths: string[];
-    scopeDeviations: string[];
-    justification: string | null;
-    flagged: boolean;
-    flaggedReason: string | null;
-}
-export interface ExperimentState {
-    results: ExperimentResult[];
-    bestMetric: number | null;
-    bestDirection: MetricDirection;
-    metricName: string;
-    metricUnit: string;
-    secondaryMetrics: MetricDef[];
-    name: string | null;
-    goal: string | null;
-    currentSegment: number;
-    maxExperiments: number | null;
-    confidence: number | null;
-    scopePaths: string[];
-    offLimits: string[];
-    constraints: string[];
-    notes: string;
-    branch: string | null;
-    baselineCommit: string | null;
-    sessionId: number | null;
-}
-export interface RunExperimentProgressDetails {
-    phase: "running";
-    elapsed: string;
-    truncation?: TruncationResult;
-    fullOutputPath?: string;
-    runDirectory?: string;
-}
-export interface RunDetails {
-    runNumber: number;
-    runDirectory: string;
-    benchmarkLogPath: string;
-    command: string;
-    exitCode: number | null;
-    durationSeconds: number;
-    passed: boolean;
-    crashed: boolean;
-    timedOut: boolean;
-    tailOutput: string;
-    parsedMetrics: NumericMetricMap | null;
-    parsedPrimary: number | null;
-    parsedAsi: ASIData | null;
-    metricName: string;
-    metricUnit: string;
-    preRunDirtyPaths: string[];
-    abandonedPriorRun: number | null;
-    truncation?: TruncationResult;
-    fullOutputPath?: string;
-}
-export interface LogDetails {
-    experiment: ExperimentResult;
-    state: ExperimentState;
-    wallClockSeconds: number | null;
-    scopeDeviations: string[];
-    justification: string | null;
-    flaggedRuns: Array<{
-        runId: number;
-        reason: string;
-    }>;
-}
-export interface PendingRunSummary {
-    command: string;
-    durationSeconds: number | null;
-    parsedAsi: ASIData | null;
-    parsedMetrics: NumericMetricMap | null;
-    parsedPrimary: number | null;
-    passed: boolean;
-    preRunDirtyPaths: string[];
-    runDirectory: string;
-    runNumber: number;
-    exitCode: number | null;
-    timedOut: boolean;
-}
-export interface RunningExperiment {
-    startedAt: number;
-    command: string;
-    runDirectory: string;
-    runNumber: number;
-}
-export interface AutoresearchRuntime {
-    autoresearchMode: boolean;
-    autoResumeArmed: boolean;
-    dashboardExpanded: boolean;
-    lastAutoResumePendingRunNumber: number | null;
-    lastRunDuration: number | null;
-    lastRunAsi: ASIData | null;
-    lastRunArtifactDir: string | null;
-    lastRunNumber: number | null;
-    lastRunSummary: PendingRunSummary | null;
-    runningExperiment: RunningExperiment | null;
-    state: ExperimentState;
-    goal: string | null;
-}
-export interface AutoresearchControlEntryData {
-    mode: "on" | "off" | "clear";
-    goal?: string;
-}
-export interface ReconstructedControlState {
-    autoresearchMode: boolean;
-    goal: string | null;
-    lastMode: AutoresearchControlEntryData["mode"] | null;
-}
-export interface RuntimeStore {
-    clear(sessionKey: string): void;
-    ensure(sessionKey: string): AutoresearchRuntime;
-}
-export interface DashboardController {
-    clear(ctx: ExtensionContext): void;
-    requestRender(): void;
-    showOverlay(ctx: ExtensionContext, runtime: AutoresearchRuntime): Promise<void>;
-    updateWidget(ctx: ExtensionContext, runtime: AutoresearchRuntime): void;
-}
-export interface AutoresearchToolFactoryOptions {
-    dashboard: DashboardController;
-    getRuntime(ctx: ExtensionContext): AutoresearchRuntime;
-    pi: ExtensionAPI;
-}
-export type AutoresearchToolResult<TDetails> = AgentToolResult<TDetails>;
-export type SessionEntries = SessionEntry[];

package/dist/types/capability/context-file.d.ts

@@ -1,17 +0,0 @@
-import type { SourceMeta } from "./types";
-/**
- * A context file that provides persistent instructions to the agent.
- */
-export interface ContextFile {
-    /** Absolute path to the file */
-    path: string;
-    /** File content */
-    content: string;
-    /** Which level this came from */
-    level: "user" | "project";
-    /** Distance from cwd (0 = in cwd, 1 = parent, etc.) for project files */
-    depth?: number;
-    /** Source metadata */
-    _source: SourceMeta;
-}
-export declare const contextFileCapability: import("./types").Capability<ContextFile>;

package/dist/types/capability/extension-module.d.ts

@@ -1,15 +0,0 @@
-import type { SourceMeta } from "./types";
-/**
- * A loaded extension module.
- */
-export interface ExtensionModule {
-    /** Extension module name (derived from path) */
-    name: string;
-    /** Absolute path to extension entrypoint */
-    path: string;
-    /** Source level */
-    level: "user" | "project";
-    /** Source metadata */
-    _source: SourceMeta;
-}
-export declare const extensionModuleCapability: import("./types").Capability<ExtensionModule>;

package/dist/types/capability/extension.d.ts

@@ -1,28 +0,0 @@
-import type { MCPServer } from "./mcp";
-import type { SourceMeta } from "./types";
-/**
- * Extension manifest structure.
- */
-export interface ExtensionManifest {
-    name?: string;
-    description?: string;
-    mcpServers?: Record<string, Omit<MCPServer, "name" | "_source">>;
-    tools?: unknown[];
-    context?: unknown;
-}
-/**
- * A loaded extension.
- */
-export interface Extension {
-    /** Extension name (from manifest.name or directory name) */
-    name: string;
-    /** Absolute path to extension directory */
-    path: string;
-    /** Parsed manifest data */
-    manifest: ExtensionManifest;
-    /** Source level */
-    level: "user" | "project";
-    /** Source metadata */
-    _source: SourceMeta;
-}
-export declare const extensionCapability: import("./types").Capability<Extension>;

package/dist/types/capability/fs.d.ts

@@ -1,20 +0,0 @@
-import * as fs from "node:fs";
-export declare function readFile(filePath: string): Promise<string | null>;
-export declare function readDirEntries(dirPath: string): Promise<fs.Dirent[]>;
-export declare function readDir(dirPath: string): Promise<string[]>;
-export declare function walkUp(startDir: string, name: string, opts?: {
-    file?: boolean;
-    dir?: boolean;
-}): Promise<string | null>;
-/**
- * Walk up from startDir looking for a `.git` entry (file or directory).
- * Returns the directory containing `.git` (the repo root), or null if not in a git repo.
- * Results are based on the cached readDirEntries, so repeated calls are cheap.
- */
-export declare function findRepoRoot(startDir: string): Promise<string | null>;
-export declare function cacheStats(): {
-    content: number;
-    dir: number;
-};
-export declare function clearCache(): void;
-export declare function invalidate(filePath: string): void;

package/dist/types/capability/hook.d.ts

@@ -1,19 +0,0 @@
-import type { SourceMeta } from "./types";
-/**
- * A hook script.
- */
-export interface Hook {
-    /** Hook name (filename without extension) */
-    name: string;
-    /** Absolute path to hook file */
-    path: string;
-    /** Hook type (pre/post) and associated tool */
-    type: "pre" | "post";
-    /** Tool this hook applies to, or "*" for all */
-    tool: string;
-    /** Source level */
-    level: "user" | "project";
-    /** Source metadata */
-    _source: SourceMeta;
-}
-export declare const hookCapability: import("./types").Capability<Hook>;

package/dist/types/capability/index.d.ts

@@ -1,80 +0,0 @@
-import type { Settings } from "../config/settings";
-import type { Capability, CapabilityInfo, CapabilityResult, LoadOptions, Provider, ProviderInfo } from "./types";
-/**
- * Define a new capability.
- */
-export declare function defineCapability<T>(def: Omit<Capability<T>, "providers">): Capability<T>;
-/**
- * Register a provider for a capability.
- */
-export declare function registerProvider<T>(capabilityId: string, provider: Provider<T>): void;
-/**
- * Load a capability by ID.
- */
-export declare function loadCapability<T>(capabilityId: string, options?: LoadOptions): Promise<CapabilityResult<T>>;
-/**
- * Initialize capability system with settings manager for persistence.
- * Call this once on startup to enable persistent provider state.
- */
-export declare function initializeWithSettings(activeSettings: Settings): void;
-/**
- * Disable a provider globally (across all capabilities).
- */
-export declare function disableProvider(providerId: string): void;
-/**
- * Enable a previously disabled provider.
- */
-export declare function enableProvider(providerId: string): void;
-/**
- * Check if a provider is enabled.
- */
-export declare function isProviderEnabled(providerId: string): boolean;
-/**
- * Get list of all disabled provider IDs.
- */
-export declare function getDisabledProviders(): string[];
-/**
- * Set disabled providers from a list (replaces current set).
- */
-export declare function setDisabledProviders(providerIds: string[]): void;
-/**
- * Get a capability definition (for introspection).
- */
-export declare function getCapability<T>(id: string): Capability<T> | undefined;
-/**
- * List all registered capability IDs.
- */
-export declare function listCapabilities(): string[];
-/**
- * Get capability info for UI display.
- */
-export declare function getCapabilityInfo(capabilityId: string): CapabilityInfo | undefined;
-/**
- * Get all capabilities info for UI display.
- */
-export declare function getAllCapabilitiesInfo(): CapabilityInfo[];
-/**
- * Get provider info for UI display.
- */
-export declare function getProviderInfo(providerId: string): ProviderInfo | undefined;
-/**
- * Get all providers info for UI display (deduplicated across capabilities).
- */
-export declare function getAllProvidersInfo(): ProviderInfo[];
-/**
- * Reset all caches. Call after chdir or filesystem changes.
- */
-export declare function reset(): void;
-/**
- * Invalidate cache for a specific path.
- * @param filePath - Absolute or relative path to invalidate
- */
-export declare function invalidate(filePath: string, cwd?: string): void;
-/**
- * Get cache stats for diagnostics.
- */
-export declare function cacheStats(): {
-    content: number;
-    dir: number;
-};
-export type * from "./types";

package/dist/types/capability/instruction.d.ts

@@ -1,17 +0,0 @@
-import type { SourceMeta } from "./types";
-/**
- * An instruction with optional file pattern matching.
- */
-export interface Instruction {
-    /** Instruction name (derived from filename) */
-    name: string;
-    /** Absolute path to instruction file */
-    path: string;
-    /** Instruction content (markdown) */
-    content: string;
-    /** Glob pattern for files this applies to */
-    applyTo?: string;
-    /** Source metadata */
-    _source: SourceMeta;
-}
-export declare const instructionCapability: import("./types").Capability<Instruction>;

package/dist/types/capability/mcp.d.ts

@@ -1,45 +0,0 @@
-import type { SourceMeta } from "./types";
-/**
- * Canonical MCP server configuration.
- */
-export interface MCPServer {
-    /** Server name (unique key) */
-    name: string;
-    /** Whether this server is enabled (default: true) */
-    enabled?: boolean;
-    /** Connection timeout in milliseconds */
-    timeout?: number;
-    /** Command to run (for stdio transport) */
-    command?: string;
-    /** Command arguments */
-    args?: string[];
-    /** Environment variables */
-    env?: Record<string, string>;
-    /** Working directory for stdio transport */
-    cwd?: string;
-    /** URL (for HTTP/SSE transport) */
-    url?: string;
-    /** HTTP headers (for HTTP transport) */
-    headers?: Record<string, string>;
-    /** Authentication configuration */
-    auth?: {
-        type: "oauth" | "apikey";
-        credentialId?: string;
-        tokenUrl?: string;
-        clientId?: string;
-        clientSecret?: string;
-    };
-    /** OAuth configuration (clientId, clientSecret, redirectUri, callbackPort, callbackPath) for servers requiring explicit client credentials */
-    oauth?: {
-        clientId?: string;
-        clientSecret?: string;
-        redirectUri?: string;
-        callbackPort?: number;
-        callbackPath?: string;
-    };
-    /** Transport type */
-    transport?: "stdio" | "sse" | "http";
-    /** Source metadata (added by loader) */
-    _source: SourceMeta;
-}
-export declare const mcpCapability: import("./types").Capability<MCPServer>;

package/dist/types/capability/prompt.d.ts

@@ -1,15 +0,0 @@
-import type { SourceMeta } from "./types";
-/**
- * A reusable prompt template.
- */
-export interface Prompt {
-    /** Prompt name (filename without extension) */
-    name: string;
-    /** Absolute path to prompt file */
-    path: string;
-    /** Prompt content (markdown) */
-    content: string;
-    /** Source metadata */
-    _source: SourceMeta;
-}
-export declare const promptCapability: import("./types").Capability<Prompt>;