@rryando/arcs 3.9.2 → 3.11.0

package/dist/utils/json-schemas.d.ts

@@ -732,6 +732,75 @@ export declare const proposalsFileSchema: z.ZodObject<{
         }[];
     }[];
 }>;
+export declare const agentTierSchema: z.ZodEnum<["heavy", "standard", "light"]>;
+export declare const agentStatusSchema: z.ZodEnum<["active", "retired"]>;
+export declare const agentKindSchema: z.ZodEnum<["primary", "subagent"]>;
+export declare const agentModeSchema: z.ZodEnum<["opencode", "claudecode"]>;
+export declare const agentRegistryRecordSchema: z.ZodObject<{
+    id: z.ZodString;
+    status: z.ZodEnum<["active", "retired"]>;
+    kind: z.ZodEnum<["primary", "subagent"]>;
+    tier: z.ZodEnum<["heavy", "standard", "light"]>;
+    modes: z.ZodArray<z.ZodEnum<["opencode", "claudecode"]>, "many">;
+    source: z.ZodEffects<z.ZodString, string, string>;
+    destination: z.ZodEffects<z.ZodString, string, string>;
+    description: z.ZodString;
+    permissions: z.ZodObject<{
+        edit: z.ZodEnum<["allow", "deny"]>;
+        bash: z.ZodEnum<["allow", "deny"]>;
+        webfetch: z.ZodEnum<["allow", "deny"]>;
+        mcp: z.ZodEnum<["allow", "deny"]>;
+        task: z.ZodEnum<["allow", "deny"]>;
+    }, "strip", z.ZodTypeAny, {
+        task: "allow" | "deny";
+        edit: "allow" | "deny";
+        bash: "allow" | "deny";
+        webfetch: "allow" | "deny";
+        mcp: "allow" | "deny";
+    }, {
+        task: "allow" | "deny";
+        edit: "allow" | "deny";
+        bash: "allow" | "deny";
+        webfetch: "allow" | "deny";
+        mcp: "allow" | "deny";
+    }>;
+    replacementId: z.ZodOptional<z.ZodString>;
+}, "strip", z.ZodTypeAny, {
+    status: "active" | "retired";
+    id: string;
+    description: string;
+    kind: "primary" | "subagent";
+    tier: "heavy" | "standard" | "light";
+    modes: ("opencode" | "claudecode")[];
+    source: string;
+    destination: string;
+    permissions: {
+        task: "allow" | "deny";
+        edit: "allow" | "deny";
+        bash: "allow" | "deny";
+        webfetch: "allow" | "deny";
+        mcp: "allow" | "deny";
+    };
+    replacementId?: string | undefined;
+}, {
+    status: "active" | "retired";
+    id: string;
+    description: string;
+    kind: "primary" | "subagent";
+    tier: "heavy" | "standard" | "light";
+    modes: ("opencode" | "claudecode")[];
+    source: string;
+    destination: string;
+    permissions: {
+        task: "allow" | "deny";
+        edit: "allow" | "deny";
+        bash: "allow" | "deny";
+        webfetch: "allow" | "deny";
+        mcp: "allow" | "deny";
+    };
+    replacementId?: string | undefined;
+}>;
+export type AgentRegistryRecord = z.infer<typeof agentRegistryRecordSchema>;
 export declare const opencodeSourceManifestSchema: z.ZodObject<{
     bundleId: z.ZodString;
     installMode: z.ZodString;
@@ -748,14 +817,68 @@ export declare const opencodeSourceManifestSchema: z.ZodObject<{
         destination: string;
     }>;
     agents: z.ZodArray<z.ZodObject<{
-        source: z.ZodString;
-        destination: z.ZodString;
+        id: z.ZodString;
+        status: z.ZodEnum<["active", "retired"]>;
+        kind: z.ZodEnum<["primary", "subagent"]>;
+        tier: z.ZodEnum<["heavy", "standard", "light"]>;
+        modes: z.ZodArray<z.ZodEnum<["opencode", "claudecode"]>, "many">;
+        source: z.ZodEffects<z.ZodString, string, string>;
+        destination: z.ZodEffects<z.ZodString, string, string>;
+        description: z.ZodString;
+        permissions: z.ZodObject<{
+            edit: z.ZodEnum<["allow", "deny"]>;
+            bash: z.ZodEnum<["allow", "deny"]>;
+            webfetch: z.ZodEnum<["allow", "deny"]>;
+            mcp: z.ZodEnum<["allow", "deny"]>;
+            task: z.ZodEnum<["allow", "deny"]>;
+        }, "strip", z.ZodTypeAny, {
+            task: "allow" | "deny";
+            edit: "allow" | "deny";
+            bash: "allow" | "deny";
+            webfetch: "allow" | "deny";
+            mcp: "allow" | "deny";
+        }, {
+            task: "allow" | "deny";
+            edit: "allow" | "deny";
+            bash: "allow" | "deny";
+            webfetch: "allow" | "deny";
+            mcp: "allow" | "deny";
+        }>;
+        replacementId: z.ZodOptional<z.ZodString>;
     }, "strip", z.ZodTypeAny, {
+        status: "active" | "retired";
+        id: string;
+        description: string;
+        kind: "primary" | "subagent";
+        tier: "heavy" | "standard" | "light";
+        modes: ("opencode" | "claudecode")[];
         source: string;
         destination: string;
+        permissions: {
+            task: "allow" | "deny";
+            edit: "allow" | "deny";
+            bash: "allow" | "deny";
+            webfetch: "allow" | "deny";
+            mcp: "allow" | "deny";
+        };
+        replacementId?: string | undefined;
     }, {
+        status: "active" | "retired";
+        id: string;
+        description: string;
+        kind: "primary" | "subagent";
+        tier: "heavy" | "standard" | "light";
+        modes: ("opencode" | "claudecode")[];
         source: string;
         destination: string;
+        permissions: {
+            task: "allow" | "deny";
+            edit: "allow" | "deny";
+            bash: "allow" | "deny";
+            webfetch: "allow" | "deny";
+            mcp: "allow" | "deny";
+        };
+        replacementId?: string | undefined;
     }>, "many">;
     ownedPaths: z.ZodArray<z.ZodString, "many">;
     plugin: z.ZodObject<{
@@ -808,8 +931,22 @@ export declare const opencodeSourceManifestSchema: z.ZodObject<{
         destination: string;
     };
     agents: {
+        status: "active" | "retired";
+        id: string;
+        description: string;
+        kind: "primary" | "subagent";
+        tier: "heavy" | "standard" | "light";
+        modes: ("opencode" | "claudecode")[];
         source: string;
         destination: string;
+        permissions: {
+            task: "allow" | "deny";
+            edit: "allow" | "deny";
+            bash: "allow" | "deny";
+            webfetch: "allow" | "deny";
+            mcp: "allow" | "deny";
+        };
+        replacementId?: string | undefined;
     }[];
     ownedPaths: string[];
     plugin: {
@@ -834,8 +971,22 @@ export declare const opencodeSourceManifestSchema: z.ZodObject<{
         destination: string;
     };
     agents: {
+        status: "active" | "retired";
+        id: string;
+        description: string;
+        kind: "primary" | "subagent";
+        tier: "heavy" | "standard" | "light";
+        modes: ("opencode" | "claudecode")[];
         source: string;
         destination: string;
+        permissions: {
+            task: "allow" | "deny";
+            edit: "allow" | "deny";
+            bash: "allow" | "deny";
+            webfetch: "allow" | "deny";
+            mcp: "allow" | "deny";
+        };
+        replacementId?: string | undefined;
     }[];
     ownedPaths: string[];
     plugin: {
@@ -858,9 +1009,35 @@ export declare const opencodeInstalledManifestSchema: z.ZodObject<{
     sourceBundleHash: z.ZodString;
     installedAt: z.ZodString;
     ownedPaths: z.ZodArray<z.ZodString, "many">;
+    agents: z.ZodDefault<z.ZodOptional<z.ZodArray<z.ZodObject<{
+        id: z.ZodString;
+        promptDestination: z.ZodEffects<z.ZodString, string, string>;
+        sourceHash: z.ZodString;
+        configKey: z.ZodOptional<z.ZodString>;
+        configHash: z.ZodOptional<z.ZodString>;
+    }, "strip", z.ZodTypeAny, {
+        id: string;
+        promptDestination: string;
+        sourceHash: string;
+        configKey?: string | undefined;
+        configHash?: string | undefined;
+    }, {
+        id: string;
+        promptDestination: string;
+        sourceHash: string;
+        configKey?: string | undefined;
+        configHash?: string | undefined;
+    }>, "many">>>;
 }, "strip", z.ZodTypeAny, {
     bundleId: string;
     installMode: string;
+    agents: {
+        id: string;
+        promptDestination: string;
+        sourceHash: string;
+        configKey?: string | undefined;
+        configHash?: string | undefined;
+    }[];
     ownedPaths: string[];
     sourceBundleVersion: string;
     sourceBundleHash: string;
@@ -872,5 +1049,12 @@ export declare const opencodeInstalledManifestSchema: z.ZodObject<{
     sourceBundleVersion: string;
     sourceBundleHash: string;
     installedAt: string;
+    agents?: {
+        id: string;
+        promptDestination: string;
+        sourceHash: string;
+        configKey?: string | undefined;
+        configHash?: string | undefined;
+    }[] | undefined;
 }>;
 //# sourceMappingURL=json-schemas.d.ts.map

package/dist/utils/json-schemas.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"json-schemas.d.ts","sourceRoot":"","sources":["../../src/utils/json-schemas.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AAMxB,eAAO,MAAM,iBAAiB;;;;;;;;;EAG5B,CAAC;AAEH,MAAM,MAAM,WAAW,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,iBAAiB,CAAC,CAAC;AAM5D,eAAO,MAAM,eAAe;;;;;;;;;EAG1B,CAAC;AAEH,MAAM,MAAM,SAAS,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,eAAe,CAAC,CAAC;AAMxD,eAAO,MAAM,aAAa;;;;;;;;;;;;;;;EAKxB,CAAC;AAEH,eAAO,MAAM,cAAc;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAGzB,CAAC;AAEH,MAAM,MAAM,YAAY,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,cAAc,CAAC,CAAC;AAM1D,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;gCASZ,CAAC;AAEjB,MAAM,MAAM,SAAS,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,eAAe,CAAC,CAAC;AAExD,eAAO,MAAM,iBAAiB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;gCAad,CAAC;AAEjB,MAAM,MAAM,eAAe,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,iBAAiB,CAAC,CAAC;AAWhE,eAAO,MAAM,cAAc;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAWzB,CAAC;AAEH,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAE1B,CAAC;AAEH,eAAO,MAAM,mBAAmB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAY9B,CAAC;AAEH,eAAO,MAAM,oBAAoB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAE/B,CAAC;AAEH,eAAO,MAAM,cAAc;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EASzB,CAAC;AAEH,eAAO,MAAM,eAAe;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAE1B,CAAC;AAMH,eAAO,MAAM,kBAAkB,4DAA0D,CAAC;AAE1F,eAAO,MAAM,cAAc;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAazB,CAAC;AAEH,eAAO,MAAM,mBAAmB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAK9B,CAAC;AAYH,eAAO,MAAM,eAAe,2CAAyC,CAAC;AACtE,eAAO,MAAM,iBAAiB,kCAAgC,CAAC;AAC/D,eAAO,MAAM,eAAe,oCAAkC,CAAC;AAC/D,eAAO,MAAM,eAAe,uCAAqC,CAAC;AAkBlE,eAAO,MAAM,yBAAyB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAoBpC,CAAC;AAEH,MAAM,MAAM,mBAAmB,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,yBAAyB,CAAC,CAAC;AAE5E,eAAO,MAAM,4BAA4B;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAmBvC,CAAC;AAEH,eAAO,MAAM,+BAA+B;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAmB1C,CAAC"}

package/dist/utils/json-schemas.js

@@ -138,6 +138,43 @@ const configMergeSchema = z.object({
     value: z.unknown().transform((v) => v),
     mode: z.enum(["overwrite", "if-absent", "merge"]).optional(),
 });
+export const agentTierSchema = z.enum(["heavy", "standard", "light"]);
+export const agentStatusSchema = z.enum(["active", "retired"]);
+export const agentKindSchema = z.enum(["primary", "subagent"]);
+export const agentModeSchema = z.enum(["opencode", "claudecode"]);
+const agentPermissionSchema = z.enum(["allow", "deny"]);
+function isPromptPath(value) {
+    const segments = value.split("/");
+    return (segments.length >= 2 &&
+        segments[0] === "prompts" &&
+        segments.slice(1).every((segment) => segment !== "" && segment !== "." && segment !== "..") &&
+        !value.includes("\\") &&
+        (segments.at(-1)?.endsWith(".txt") ?? false));
+}
+const agentPromptPathSchema = z
+    .string()
+    .refine(isPromptPath, "must be a safe relative .txt path under prompts/");
+export const agentRegistryRecordSchema = z.object({
+    id: z.string().regex(/^[a-z0-9]+(?:-[a-z0-9]+)*$/),
+    status: agentStatusSchema,
+    kind: agentKindSchema,
+    tier: agentTierSchema,
+    modes: z.array(agentModeSchema).min(1),
+    source: agentPromptPathSchema,
+    destination: agentPromptPathSchema,
+    description: z.string().min(1),
+    permissions: z.object({
+        edit: agentPermissionSchema,
+        bash: agentPermissionSchema,
+        webfetch: agentPermissionSchema,
+        mcp: agentPermissionSchema,
+        task: agentPermissionSchema,
+    }),
+    replacementId: z
+        .string()
+        .regex(/^[a-z0-9]+(?:-[a-z0-9]+)*$/)
+        .optional(),
+});
 export const opencodeSourceManifestSchema = z.object({
     bundleId: z.string(),
     installMode: z.string(),
@@ -147,10 +184,7 @@ export const opencodeSourceManifestSchema = z.object({
         source: z.string(),
         destination: z.string(),
     }),
-    agents: z.array(z.object({
-        source: z.string(),
-        destination: z.string(),
-    })),
+    agents: z.array(agentRegistryRecordSchema),
     ownedPaths: z.array(z.string()),
     plugin: z.object({
         required: z.boolean(),
@@ -168,5 +202,15 @@ export const opencodeInstalledManifestSchema = z.object({
     sourceBundleHash: z.string(),
     installedAt: z.string(),
     ownedPaths: z.array(z.string()),
+    agents: z
+        .array(z.object({
+        id: z.string(),
+        promptDestination: agentPromptPathSchema,
+        sourceHash: z.string(),
+        configKey: z.string().optional(),
+        configHash: z.string().optional(),
+    }))
+        .optional()
+        .default([]),
 });
 //# sourceMappingURL=json-schemas.js.map

package/dist/utils/json-schemas.js.map

@@ -1 +1 @@
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package/dist/utils/knowledge-store.d.ts

@@ -34,14 +34,20 @@ export interface UpdateKnowledgeInput {
     id: string;
     title?: string;
     kind?: import("./storage-utils.js").KnowledgeKind;
-    audience?: import("./storage-utils.js").KnowledgeAudience;
+    audience?: import("./storage-utils.js").KnowledgeAudience | null;
     summary?: string;
     keywords?: string[];
     sourceFiles?: import("./storage-utils.js").FileRef[];
+    content?: string;
     now?: string;
 }
+export interface KnowledgeDocument {
+    meta: KnowledgeMeta;
+    body: string;
+}
 export declare function createKnowledgeEntry(projectDir: string, input: CreateKnowledgeInput): Promise<KnowledgeMeta>;
 export declare function updateKnowledgeEntry(projectDir: string, input: UpdateKnowledgeInput): Promise<KnowledgeMeta>;
+export declare function updateKnowledgeDocument(projectDir: string, input: UpdateKnowledgeInput): Promise<KnowledgeDocument>;
 export declare function deleteKnowledgeEntry(projectDir: string, id: string): Promise<void>;
 export declare function readKnowledgeIndex(projectDir: string): Promise<{
     entries: KnowledgeMeta[];

package/dist/utils/knowledge-store.d.ts.map

@@ -1 +1 @@
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package/dist/utils/knowledge-store.js

@@ -4,7 +4,7 @@
  * Provides create, update, delete, and index-read operations for knowledge
  * entries, with automatic index maintenance and rebuild-on-read resilience.
  */
-import { readdir, unlink, writeFile } from "node:fs/promises";
+import { readdir, readFile } from "node:fs/promises";
 import { basename, join } from "node:path";
 import { invalidateGraphCache } from "../retrieval/graph-invalidate.js";
 import { indexRebuildFailed, invalidFileFormat, itemNotFound, normalizedIdCollision, } from "./errors.js";
@@ -12,7 +12,7 @@ import { withLock } from "./file-lock.js";
 import { readJsonSafe } from "./json.js";
 import { knowledgeMetaSchema } from "./json-schemas.js";
 import { normalizeIdentifier } from "./slug.js";
-import { buildBody, ensureDir, fileExists, nowISO, rewriteH1, sanitizeFileRefs, sanitizeKeywords, validateKnowledgeKind, writeJson, } from "./storage-utils.js";
+import { buildBody, ensureDir, fileExists, nowISO, sanitizeFileRefs, sanitizeKeywords, validateKnowledgeKind, writeFilesTransaction, writeJson, } from "./storage-utils.js";
 export { KNOWLEDGE_AUDIENCES, KNOWLEDGE_KINDS } from "./storage-utils.js";
 // ---------------------------------------------------------------------------
 // Index helpers
@@ -61,15 +61,19 @@ async function isKnowledgeIndexStale(knowledgeDir, index) {
     }
     return false;
 }
-async function writeKnowledgeIndex(knowledgeDir, index) {
-    const indexPath = join(knowledgeDir, "index.json");
-    await withLock(indexPath, async () => {
-        await writeJson(indexPath, index);
-    });
-}
 // ---------------------------------------------------------------------------
 // Public API
 // ---------------------------------------------------------------------------
+function rewriteBodyTitle(body, title) {
+    if (body.startsWith("# ")) {
+        const newline = body.indexOf("\n");
+        return newline === -1 ? `# ${title}\n` : `# ${title}${body.slice(newline)}`;
+    }
+    return `# ${title}\n\n${body}`;
+}
+function knowledgeStoreLockPath(knowledgeDir) {
+    return join(knowledgeDir, ".store");
+}
 export async function createKnowledgeEntry(projectDir, input) {
     validateKnowledgeKind(input.kind);
     const keywords = sanitizeKeywords(input.keywords);
@@ -77,39 +81,40 @@ export async function createKnowledgeEntry(projectDir, input) {
     const normalizedId = normalizeIdentifier(input.id);
     const knowledgeDir = join(projectDir, "knowledge");
     await ensureDir(knowledgeDir);
-    const metaPath = join(knowledgeDir, `${normalizedId}.meta.json`);
-    if (await fileExists(metaPath)) {
-        throw normalizedIdCollision("knowledge entry", input.id, normalizedId);
-    }
-    const ts = nowISO(input.now);
-    const bodyFile = join("knowledge", `${normalizedId}.md`);
-    const meta = {
-        id: normalizedId,
-        normalizedId,
-        title: input.title,
-        kind: input.kind,
-        ...(input.audience && { audience: input.audience }),
-        keywords,
-        summary: input.summary ?? "",
-        ...(sourceFiles && { sourceFiles }),
-        file: bodyFile,
-        createdAt: ts,
-        updatedAt: ts,
-    };
-    await writeJson(metaPath, meta);
-    await writeFile(join(projectDir, bodyFile), buildBody(input.title, input.content), "utf-8");
-    const index = (await readJsonSafe(join(knowledgeDir, "index.json"))) ?? {
-        entries: [],
-    };
-    index.entries.push(meta);
-    await writeKnowledgeIndex(knowledgeDir, index);
-    invalidateGraphCache(basename(projectDir));
-    return meta;
+    return withLock(knowledgeStoreLockPath(knowledgeDir), async () => {
+        const metaPath = join(knowledgeDir, `${normalizedId}.meta.json`);
+        if (await fileExists(metaPath)) {
+            throw normalizedIdCollision("knowledge entry", input.id, normalizedId);
+        }
+        const ts = nowISO(input.now);
+        const bodyFile = join("knowledge", `${normalizedId}.md`);
+        const bodyPath = join(projectDir, bodyFile);
+        const indexPath = join(knowledgeDir, "index.json");
+        const meta = {
+            id: normalizedId,
+            normalizedId,
+            title: input.title,
+            kind: input.kind,
+            ...(input.audience && { audience: input.audience }),
+            keywords,
+            summary: input.summary ?? "",
+            ...(sourceFiles && sourceFiles.length > 0 && { sourceFiles }),
+            file: bodyFile,
+            createdAt: ts,
+            updatedAt: ts,
+        };
+        const index = (await readJsonSafe(indexPath)) ?? { entries: [] };
+        index.entries.push(meta);
+        await writeFilesTransaction([
+            { path: metaPath, content: `${JSON.stringify(meta, null, 2)}\n` },
+            { path: bodyPath, content: buildBody(input.title, input.content) },
+            { path: indexPath, content: `${JSON.stringify(index, null, 2)}\n` },
+        ]);
+        invalidateGraphCache(basename(projectDir));
+        return meta;
+    });
 }
-export async function updateKnowledgeEntry(projectDir, input) {
-    if (input.kind !== undefined) {
-        validateKnowledgeKind(input.kind);
-    }
+async function updateKnowledgeEntryUnlocked(projectDir, input) {
     const normalizedId = normalizeIdentifier(input.id);
     const knowledgeDir = join(projectDir, "knowledge");
     const metaPath = join(knowledgeDir, `${normalizedId}.meta.json`);
@@ -117,13 +122,21 @@ export async function updateKnowledgeEntry(projectDir, input) {
     if (!meta) {
         throw itemNotFound("knowledge entry", input.id);
     }
+    const bodyPath = join(projectDir, meta.file);
+    let body = await readFile(bodyPath, "utf-8").catch(() => "");
     if (input.kind !== undefined)
         meta.kind = input.kind;
-    if (input.audience !== undefined)
-        meta.audience = input.audience;
+    if (input.audience !== undefined) {
+        if (input.audience === null) {
+            delete meta.audience;
+        }
+        else {
+            meta.audience = input.audience;
+        }
+    }
     if (input.title !== undefined && input.title !== meta.title) {
-        const bodyPath = join(projectDir, meta.file);
-        await rewriteH1(bodyPath, input.title);
+        if (input.content === undefined)
+            body = rewriteBodyTitle(body, input.title);
         meta.title = input.title;
     }
     if (input.summary !== undefined)
@@ -138,11 +151,11 @@ export async function updateKnowledgeEntry(projectDir, input) {
             meta.sourceFiles = sanitizeFileRefs(input.sourceFiles);
         }
     }
+    if (input.content !== undefined)
+        body = input.content;
     meta.updatedAt = nowISO(input.now);
-    await writeJson(metaPath, meta);
-    const index = (await readJsonSafe(join(knowledgeDir, "index.json"))) ?? {
-        entries: [],
-    };
+    const indexPath = join(knowledgeDir, "index.json");
+    const index = (await readJsonSafe(indexPath)) ?? { entries: [] };
     const idx = index.entries.findIndex((e) => e.normalizedId === normalizedId);
     if (idx >= 0) {
         index.entries[idx] = meta;
@@ -150,28 +163,47 @@ export async function updateKnowledgeEntry(projectDir, input) {
     else {
         index.entries.push(meta);
     }
-    await writeKnowledgeIndex(knowledgeDir, index);
+    await writeFilesTransaction([
+        { path: metaPath, content: `${JSON.stringify(meta, null, 2)}\n` },
+        { path: bodyPath, content: body },
+        { path: indexPath, content: `${JSON.stringify(index, null, 2)}\n` },
+    ]);
     invalidateGraphCache(basename(projectDir));
-    return meta;
+    return { meta, body };
+}
+async function updateKnowledgeDocumentLocked(projectDir, input) {
+    if (input.kind !== undefined)
+        validateKnowledgeKind(input.kind);
+    const knowledgeDir = join(projectDir, "knowledge");
+    await ensureDir(knowledgeDir);
+    return withLock(knowledgeStoreLockPath(knowledgeDir), () => updateKnowledgeEntryUnlocked(projectDir, input));
+}
+export async function updateKnowledgeEntry(projectDir, input) {
+    return (await updateKnowledgeDocumentLocked(projectDir, input)).meta;
+}
+export async function updateKnowledgeDocument(projectDir, input) {
+    return updateKnowledgeDocumentLocked(projectDir, input);
 }
 export async function deleteKnowledgeEntry(projectDir, id) {
     const normalizedId = normalizeIdentifier(id);
     const knowledgeDir = join(projectDir, "knowledge");
-    const metaPath = join(knowledgeDir, `${normalizedId}.meta.json`);
-    const meta = await readJsonSafe(metaPath);
-    if (!meta) {
-        throw itemNotFound("knowledge entry", id);
-    }
-    const bodyPath = join(projectDir, meta.file);
-    await unlink(metaPath);
-    if (await fileExists(bodyPath)) {
-        await unlink(bodyPath);
-    }
-    const index = (await readJsonSafe(join(knowledgeDir, "index.json"))) ?? {
-        entries: [],
-    };
-    index.entries = index.entries.filter((e) => e.normalizedId !== normalizedId);
-    await writeKnowledgeIndex(knowledgeDir, index);
+    await ensureDir(knowledgeDir);
+    await withLock(knowledgeStoreLockPath(knowledgeDir), async () => {
+        const metaPath = join(knowledgeDir, `${normalizedId}.meta.json`);
+        const meta = await readJsonSafe(metaPath);
+        if (!meta)
+            throw itemNotFound("knowledge entry", id);
+        const bodyPath = join(projectDir, meta.file);
+        const indexPath = join(knowledgeDir, "index.json");
+        const index = (await readJsonSafe(indexPath)) ?? { entries: [] };
+        index.entries = index.entries.filter((entry) => entry.normalizedId !== normalizedId);
+        await writeFilesTransaction([
+            { path: metaPath, content: null },
+            { path: bodyPath, content: null },
+            { path: indexPath, content: `${JSON.stringify(index, null, 2)}\n` },
+        ]);
+        invalidateGraphCache(basename(projectDir));
+    });
 }
 export async function readKnowledgeIndex(projectDir) {
     const knowledgeDir = join(projectDir, "knowledge");