@rotifer/playground 0.7.1 → 0.7.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/CHANGELOG.md +16 -1
- package/dist/cloud/client.d.ts +1 -0
- package/dist/cloud/client.d.ts.map +1 -1
- package/dist/cloud/client.js +15 -0
- package/dist/cloud/client.js.map +1 -1
- package/dist/commands/install.d.ts.map +1 -1
- package/dist/commands/install.js +2 -0
- package/dist/commands/install.js.map +1 -1
- package/dist/commands/publish.d.ts.map +1 -1
- package/dist/commands/publish.js +21 -2
- package/dist/commands/publish.js.map +1 -1
- package/dist/commands/wrap.d.ts.map +1 -1
- package/dist/commands/wrap.js +37 -1
- package/dist/commands/wrap.js.map +1 -1
- package/dist/utils/domain-suggest.d.ts +18 -0
- package/dist/utils/domain-suggest.d.ts.map +1 -0
- package/dist/utils/domain-suggest.js +121 -0
- package/dist/utils/domain-suggest.js.map +1 -0
- package/package.json +1 -1
package/CHANGELOG.md
CHANGED
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@@ -7,9 +7,24 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
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## [Unreleased]
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10
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+
## [0.7.5] - 2026-02-17
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11
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+
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12
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### Added
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13
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+
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14
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- **Gene Domain Registry** — new `domain_registry` table reduces domain fragmentation across the ecosystem
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15
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- `rotifer wrap` now suggests domains from local cache when `--domain` is omitted (interactive TTY selection, non-TTY auto-pick)
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16
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- Domain format validation on `rotifer publish` (`a-z0-9` + dots only)
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- Local domain cache (`~/.rotifer/domain_registry.json`) auto-refreshed after `publish` and `install`
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18
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- **Gene Version Chain** (Spec §4.6) — `previous_version_id` and `changelog` fields on `genes` table
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- `rotifer publish --changelog "..."` stores version notes (max 500 chars)
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20
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- `previous_version_id` auto-linked on publish (queries latest same-name gene by owner)
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- Trigger-based RLS: `previous_version_id` must reference same-owner gene
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- Backfill migration links existing multi-version genes chronologically
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- **Domain suggest RPC** — `suggest_domain(description)` full-text search on `domain_registry`
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+
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### Fixed
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12
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-
- **Windows login compatibility** — `rotifer login` now opens the browser correctly on Windows; previously `start` treated the URL as a window title instead of a URI
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27
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- **Windows login compatibility** — `rotifer login` now opens the browser correctly on Windows; previously `start` treated the URL as a window title instead of a URI
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- Extract `openBrowser()` utility to `src/utils/open-browser.ts` for cross-platform browser launching (win32/darwin/linux)
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## [0.7.0] - 2026-03-01
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package/dist/cloud/client.d.ts
CHANGED
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"client.d.ts","sourceRoot":"","sources":["../../src/cloud/client.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EACV,WAAW,EACX,SAAS,EACT,qBAAqB,EACrB,kBAAkB,EAClB,eAAe,EACf,aAAa,EACd,MAAM,YAAY,CAAC;AASpB,wBAAgB,eAAe,IAAI,WAAW,CAa7C;AAgDD,wBAAsB,SAAS,CAAC,OAAO,EAAE;IACvC,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB,GAAG,OAAO,CAAC,qBAAqB,CAAC,CA4CjC;AAED,wBAAsB,OAAO,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,CAAC,CAkC5D;AAED,wBAAsB,WAAW,CAAC,IAAI,EAAE;IACtC,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,MAAM,CAAC;IACf,OAAO,EAAE,MAAM,CAAC;IAChB,QAAQ,EAAE,MAAM,CAAC;IACjB,WAAW,EAAE,MAAM,CAAC;IACpB,SAAS,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACnC,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;
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1
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{"version":3,"file":"client.d.ts","sourceRoot":"","sources":["../../src/cloud/client.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EACV,WAAW,EACX,SAAS,EACT,qBAAqB,EACrB,kBAAkB,EAClB,eAAe,EACf,aAAa,EACd,MAAM,YAAY,CAAC;AASpB,wBAAgB,eAAe,IAAI,WAAW,CAa7C;AAgDD,wBAAsB,SAAS,CAAC,OAAO,EAAE;IACvC,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB,GAAG,OAAO,CAAC,qBAAqB,CAAC,CA4CjC;AAED,wBAAsB,OAAO,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,CAAC,CAkC5D;AAED,wBAAsB,WAAW,CAAC,IAAI,EAAE;IACtC,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,MAAM,CAAC;IACf,OAAO,EAAE,MAAM,CAAC;IAChB,QAAQ,EAAE,MAAM,CAAC;IACjB,WAAW,EAAE,MAAM,CAAC;IACpB,SAAS,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACnC,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,SAAS,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;CAC3B,GAAG,OAAO,CAAC,SAAS,GAAG;IAAE,QAAQ,EAAE,OAAO,CAAA;CAAE,CAAC,CAuG7C;AAED,wBAAsB,aAAa,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CAa7D;AAED,wBAAsB,gBAAgB,CAAC,OAAO,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAKvE;AAID,wBAAsB,WAAW,CAC/B,MAAM,EAAE,MAAM,EACd,OAAO,EAAE,aAAa,GACrB,OAAO,CAAC,eAAe,CAAC,CA0C1B;AAED,wBAAsB,aAAa,CAAC,OAAO,EAAE;IAC3C,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB,GAAG,OAAO,CAAC,kBAAkB,CAAC,CA8C9B;AAID,MAAM,WAAW,sBAAsB;IACrC,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,EAAE,MAAM,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,eAAe,EAAE,MAAM,CAAC;IACxB,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,EAAE,MAAM,CAAC;CACrB;AAED,MAAM,WAAW,2BAA2B;IAC1C,KAAK,EAAE,MAAM,CAAC;IACd,eAAe,EAAE,MAAM,CAAC;IACxB,eAAe,EAAE,MAAM,CAAC;IACxB,UAAU,EAAE,MAAM,CAAC;IACnB,eAAe,EAAE,MAAM,CAAC;CACzB;AAED,MAAM,WAAW,gBAAgB;IAC/B,QAAQ,EAAE,MAAM,CAAC;IACjB,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B,KAAK,EAAE,MAAM,CAAC;IACd,eAAe,EAAE,MAAM,CAAC;IACxB,eAAe,EAAE,MAAM,CAAC;IACxB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,wBAAsB,iBAAiB,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,sBAAsB,CAAC,CA0CvF;AAED,wBAAsB,sBAAsB,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,2BAA2B,CAAC,CAkCjG;AAED,wBAAsB,wBAAwB,CAAC,KAAK,GAAE,MAAW,GAAG,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAgB9F"}
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package/dist/cloud/client.js
CHANGED
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@@ -175,6 +175,17 @@ async function publishGene(opts) {
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const existCheck = await fetch(apiUrl(`/genes?owner_id=eq.${creds.user.id}&name=eq.${opts.name}&version=eq.${opts.version}&select=id`), { headers: authHeaders() });
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const existData = existCheck.ok ? (await existCheck.json()) : [];
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const isUpdate = existData.length > 0;
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let previousVersionId = null;
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if (!isUpdate) {
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const prevCheck = await fetch(apiUrl(`/genes?owner_id=eq.${creds.user.id}&name=eq.${opts.name}&select=id&order=created_at.desc&limit=1`), { headers: authHeaders() });
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const prevData = prevCheck.ok ? (await prevCheck.json()) : [];
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if (prevData.length > 0) {
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previousVersionId = prevData[0].id;
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}
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}
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const changelog = opts.changelog
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? opts.changelog.slice(0, 500)
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: null;
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const body = {
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owner_id: creds.user.id,
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name: opts.name,
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@@ -189,6 +200,10 @@ async function publishGene(opts) {
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};
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if (opts.readme)
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body.readme = opts.readme;
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if (changelog)
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body.changelog = changelog;
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if (previousVersionId)
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body.previous_version_id = previousVersionId;
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const res = await fetch(apiUrl("/genes?on_conflict=owner_id,name,version"), {
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method: "POST",
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headers: {
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package/dist/cloud/client.js.map
CHANGED
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@@ -1 +1 @@
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|
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1
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+
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|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"install.d.ts","sourceRoot":"","sources":["../../src/commands/install.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;
|
|
1
|
+
{"version":3,"file":"install.d.ts","sourceRoot":"","sources":["../../src/commands/install.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAYpC,eAAO,MAAM,cAAc,SA2EvB,CAAC"}
|
package/dist/commands/install.js
CHANGED
|
@@ -40,6 +40,7 @@ const node_path_1 = require("node:path");
|
|
|
40
40
|
const display = __importStar(require("../utils/display.js"));
|
|
41
41
|
const config_js_1 = require("../utils/config.js");
|
|
42
42
|
const client_js_1 = require("../cloud/client.js");
|
|
43
|
+
const domain_suggest_js_1 = require("../utils/domain-suggest.js");
|
|
43
44
|
exports.installCommand = new commander_1.Command("install")
|
|
44
45
|
.description("Install a gene from Rotifer Cloud")
|
|
45
46
|
.argument("<gene-id>", "cloud gene ID to install")
|
|
@@ -85,6 +86,7 @@ exports.installCommand = new commander_1.Command("install")
|
|
|
85
86
|
console.log();
|
|
86
87
|
display.info("Test it: rotifer test " + gene.name);
|
|
87
88
|
display.info("Submit to local Arena: rotifer arena submit " + gene.name);
|
|
89
|
+
(0, domain_suggest_js_1.refreshDomainCacheFromCloud)().catch(() => { });
|
|
88
90
|
}
|
|
89
91
|
catch (err) {
|
|
90
92
|
display.error(err.message || "Install failed");
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"install.js","sourceRoot":"","sources":["../../src/commands/install.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,yCAAoC;AACpC,qCAIiB;AACjB,yCAAiC;AACjC,6DAA+C;AAC/C,kDAAgE;AAChE,kDAA+D;
|
|
1
|
+
{"version":3,"file":"install.js","sourceRoot":"","sources":["../../src/commands/install.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,yCAAoC;AACpC,qCAIiB;AACjB,yCAAiC;AACjC,6DAA+C;AAC/C,kDAAgE;AAChE,kDAA+D;AAC/D,kEAAyE;AAE5D,QAAA,cAAc,GAAG,IAAI,mBAAO,CAAC,SAAS,CAAC;KACjD,WAAW,CAAC,mCAAmC,CAAC;KAChD,QAAQ,CAAC,WAAW,EAAE,0BAA0B,CAAC;KACjD,MAAM,CAAC,SAAS,EAAE,0CAA0C,EAAE,KAAK,CAAC;KACpE,MAAM,CAAC,KAAK,EAAE,MAAc,EAAE,OAA2B,EAAE,EAAE;IAC5D,OAAO,CAAC,MAAM,CAAC,oBAAoB,CAAC,CAAC;IAErC,MAAM,IAAI,GAAG,IAAA,0BAAc,GAAE,CAAC;IAC9B,MAAM,MAAM,GAAG,IAAA,sBAAU,EAAC,IAAI,CAAC,CAAC;IAEhC,IAAI,CAAC;QACH,OAAO,CAAC,IAAI,CAAC,2BAA2B,CAAC,CAAC;QAC1C,MAAM,IAAI,GAAG,MAAM,IAAA,mBAAO,EAAC,MAAM,CAAC,CAAC;QAEnC,MAAM,OAAO,GAAG,IAAA,gBAAI,EAAC,IAAI,EAAE,MAAM,CAAC,SAAS,EAAE,IAAI,CAAC,IAAI,CAAC,CAAC;QAExD,IAAI,IAAA,oBAAU,EAAC,OAAO,CAAC,IAAI,CAAC,OAAO,CAAC,KAAK,EAAE,CAAC;YAC1C,OAAO,CAAC,cAAc,CAAC;gBACrB,IAAI,EAAE,OAAO;gBACb,OAAO,EAAE,SAAS,IAAI,CAAC,IAAI,0BAA0B;gBACrD,IAAI,EAAE,OAAO;gBACb,UAAU,EAAE,uDAAuD;aACpE,CAAC,CAAC;YACH,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAClB,CAAC;QAED,IAAA,mBAAS,EAAC,OAAO,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;QAExC,IAAA,uBAAa,EACX,IAAA,gBAAI,EAAC,OAAO,EAAE,gBAAgB,CAAC,EAC/B,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC,GAAG,IAAI,CAC/C,CAAC;QAEF,OAAO,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAC;QAEnC,IAAI,IAAI,CAAC,QAAQ,EAAE,CAAC;YAClB,OAAO,CAAC,IAAI,CAAC,4BAA4B,CAAC,CAAC;YAC3C,MAAM,SAAS,GAAG,MAAM,IAAA,4BAAgB,EAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;YACxD,IAAA,uBAAa,EAAC,IAAA,gBAAI,EAAC,OAAO,EAAE,cAAc,CAAC,EAAE,SAAS,CAAC,CAAC;YACxD,OAAO,CAAC,OAAO,CACb,oBAAoB,CAAC,SAAS,CAAC,MAAM,GAAG,IAAI,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,KAAK,CAC9D,CAAC;QACJ,CAAC;QAED,IAAA,uBAAa,EACX,IAAA,gBAAI,EAAC,OAAO,EAAE,sBAAsB,CAAC,EACrC,IAAI,CAAC,SAAS,CACZ;YACE,QAAQ,EAAE,IAAI,CAAC,EAAE;YACjB,KAAK,EAAE,IAAI,CAAC,KAAK;YACjB,OAAO,EAAE,IAAI,CAAC,OAAO;YACrB,YAAY,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;SACvC,EACD,IAAI,EACJ,CAAC,CACF,GAAG,IAAI,CACT,CAAC;QAEF,OAAO,CAAC,GAAG,EAAE,CAAC;QACd,OAAO,CAAC,OAAO,CAAC,SAAS,IAAI,CAAC,IAAI,cAAc,CAAC,CAAC;QAClD,OAAO,CAAC,QAAQ,CAAC,MAAM,EAAE,GAAG,IAAI,CAAC,KAAK,IAAI,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,OAAO,EAAE,CAAC,CAAC;QACvE,OAAO,CAAC,QAAQ,CAAC,QAAQ,EAAE,IAAI,CAAC,MAAM,CAAC,CAAC;QACxC,OAAO,CAAC,QAAQ,CAAC,UAAU,EAAE,IAAI,CAAC,QAAQ,CAAC,CAAC;QAC5C,OAAO,CAAC,QAAQ,CAAC,UAAU,EAAE,OAAO,CAAC,CAAC;QACtC,OAAO,CAAC,GAAG,EAAE,CAAC;QACd,OAAO,CAAC,IAAI,CAAC,wBAAwB,GAAG,IAAI,CAAC,IAAI,CAAC,CAAC;QACnD,OAAO,CAAC,IAAI,CACV,8CAA8C,GAAG,IAAI,CAAC,IAAI,CAC3D,CAAC;QAEF,IAAA,+CAA2B,GAAE,CAAC,KAAK,CAAC,GAAG,EAAE,GAAE,CAAC,CAAC,CAAC;IAChD,CAAC;IAAC,OAAO,GAAQ,EAAE,CAAC;QAClB,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC,OAAO,IAAI,gBAAgB,CAAC,CAAC;QAC/C,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;AACH,CAAC,CAAC,CAAC"}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"publish.d.ts","sourceRoot":"","sources":["../../src/commands/publish.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;
|
|
1
|
+
{"version":3,"file":"publish.d.ts","sourceRoot":"","sources":["../../src/commands/publish.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAyIpC,eAAO,MAAM,cAAc,SAgMvB,CAAC"}
|
package/dist/commands/publish.js
CHANGED
|
@@ -41,6 +41,7 @@ const display = __importStar(require("../utils/display.js"));
|
|
|
41
41
|
const config_js_1 = require("../utils/config.js");
|
|
42
42
|
const auth_js_1 = require("../cloud/auth.js");
|
|
43
43
|
const client_js_1 = require("../cloud/client.js");
|
|
44
|
+
const domain_suggest_js_1 = require("../utils/domain-suggest.js");
|
|
44
45
|
async function publishSingleGene(name, geneDir, creds, options, quiet = false) {
|
|
45
46
|
const phenotypePath = (0, node_path_1.join)(geneDir, "phenotype.json");
|
|
46
47
|
if (!(0, node_fs_1.existsSync)(phenotypePath)) {
|
|
@@ -66,9 +67,18 @@ async function publishSingleGene(name, geneDir, creds, options, quiet = false) {
|
|
|
66
67
|
const wasmBytes = (0, node_fs_1.existsSync)(irWasmPath)
|
|
67
68
|
? (0, node_fs_1.readFileSync)(irWasmPath)
|
|
68
69
|
: null;
|
|
70
|
+
const domain = phenotype.domain || "unknown";
|
|
71
|
+
if (!/^[a-z0-9]+(\.[a-z0-9]+)*$/.test(domain)) {
|
|
72
|
+
return {
|
|
73
|
+
name,
|
|
74
|
+
status: "failed",
|
|
75
|
+
error: `Invalid domain format '${domain}'. Use lowercase letters, numbers, and dots (e.g. 'media.video').`,
|
|
76
|
+
};
|
|
77
|
+
}
|
|
69
78
|
const description = options.description ||
|
|
70
79
|
phenotype.description ||
|
|
71
|
-
`${name} gene (${
|
|
80
|
+
`${name} gene (${domain})`;
|
|
81
|
+
const changelog = options.changelog || null;
|
|
72
82
|
let readme = null;
|
|
73
83
|
const readmePath = (0, node_path_1.join)(geneDir, "README.md");
|
|
74
84
|
if ((0, node_fs_1.existsSync)(readmePath)) {
|
|
@@ -77,13 +87,14 @@ async function publishSingleGene(name, geneDir, creds, options, quiet = false) {
|
|
|
77
87
|
try {
|
|
78
88
|
const result = await (0, client_js_1.publishGene)({
|
|
79
89
|
name,
|
|
80
|
-
domain
|
|
90
|
+
domain,
|
|
81
91
|
version: phenotype.version || "0.1.0",
|
|
82
92
|
fidelity: phenotype.fidelity || "Wrapped",
|
|
83
93
|
description,
|
|
84
94
|
phenotype,
|
|
85
95
|
wasmBytes,
|
|
86
96
|
readme,
|
|
97
|
+
changelog,
|
|
87
98
|
});
|
|
88
99
|
(0, node_fs_1.writeFileSync)((0, node_path_1.join)(geneDir, ".cloud-manifest.json"), JSON.stringify({
|
|
89
100
|
cloud_id: result.id,
|
|
@@ -118,6 +129,7 @@ exports.publishCommand = new commander_1.Command("publish")
|
|
|
118
129
|
.description("Publish gene(s) to Rotifer Cloud")
|
|
119
130
|
.argument("[name]", "gene name to publish (omit when using --all)")
|
|
120
131
|
.option("--description <text>", "gene description")
|
|
132
|
+
.option("--changelog <text>", "changelog entry for this version (max 500 chars)")
|
|
121
133
|
.option("--skip-arena", "skip automatic Arena submission and reputation computation")
|
|
122
134
|
.option("--all", "publish all valid genes in the genes directory")
|
|
123
135
|
.action(async (name, options) => {
|
|
@@ -224,6 +236,9 @@ exports.publishCommand = new commander_1.Command("publish")
|
|
|
224
236
|
}
|
|
225
237
|
}
|
|
226
238
|
display.success(`${created + updated} published, ${skipped} skipped, ${failed} failed`);
|
|
239
|
+
if (created + updated > 0) {
|
|
240
|
+
(0, domain_suggest_js_1.refreshDomainCacheFromCloud)().catch(() => { });
|
|
241
|
+
}
|
|
227
242
|
}
|
|
228
243
|
else {
|
|
229
244
|
display.header("Publish to Cloud");
|
|
@@ -258,6 +273,9 @@ exports.publishCommand = new commander_1.Command("publish")
|
|
|
258
273
|
display.keyValue("Owner", manifest.owner);
|
|
259
274
|
display.keyValue("Version", manifest.version);
|
|
260
275
|
display.keyValue("Status", result.status === "updated" ? "Updated existing" : "Newly created");
|
|
276
|
+
if (options.changelog) {
|
|
277
|
+
display.keyValue("Changelog", options.changelog.slice(0, 80) + (options.changelog.length > 80 ? "..." : ""));
|
|
278
|
+
}
|
|
261
279
|
}
|
|
262
280
|
if (!options.skipArena) {
|
|
263
281
|
try {
|
|
@@ -272,6 +290,7 @@ exports.publishCommand = new commander_1.Command("publish")
|
|
|
272
290
|
else {
|
|
273
291
|
display.info("Skipped Arena (--skip-arena). Run manually: rotifer arena submit --cloud " + name);
|
|
274
292
|
}
|
|
293
|
+
(0, domain_suggest_js_1.refreshDomainCacheFromCloud)().catch(() => { });
|
|
275
294
|
}
|
|
276
295
|
});
|
|
277
296
|
//# sourceMappingURL=publish.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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+
{"version":3,"file":"publish.js","sourceRoot":"","sources":["../../src/commands/publish.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,yCAAoC;AACpC,qCAA+E;AAC/E,yCAAiC;AACjC,6DAA+C;AAC/C,kDAAgE;AAChE,8CAA+C;AAE/C,kDAK4B;AAC5B,kEAAyE;AAezE,KAAK,UAAU,iBAAiB,CAC9B,IAAY,EACZ,OAAe,EACf,KAAuB,EACvB,OAAuB,EACvB,QAAiB,KAAK;IAEtB,MAAM,aAAa,GAAG,IAAA,gBAAI,EAAC,OAAO,EAAE,gBAAgB,CAAC,CAAC;IAEtD,IAAI,CAAC,IAAA,oBAAU,EAAC,aAAa,CAAC,EAAE,CAAC;QAC/B,IAAI,CAAC,KAAK,EAAE,CAAC;YACX,OAAO,CAAC,IAAI,CAAC,aAAa,IAAI,uBAAuB,CAAC,CAAC;QACzD,CAAC;QACD,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,SAAS,EAAE,KAAK,EAAE,mBAAmB,EAAE,CAAC;IACjE,CAAC;IAED,MAAM,SAAS,GAAG,IAAI,CAAC,KAAK,CAAC,IAAA,sBAAY,EAAC,aAAa,EAAE,OAAO,CAAC,CAAC,CAAC;IAEnE,IAAI,SAAS,CAAC,QAAQ,KAAK,QAAQ,EAAE,CAAC;QACpC,MAAM,GAAG,GAAG,SAAS,CAAC,OAAO,CAAC;QAC9B,IAAI,CAAC,GAAG,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,IAAI,GAAG,CAAC,cAAc,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;YAClF,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,KAAK,EAAE,oCAAoC,EAAE,CAAC;QACjF,CAAC;QACD,MAAM,SAAS,GAAG,8HAA8H,CAAC;QACjJ,KAAK,MAAM,MAAM,IAAI,GAAG,CAAC,cAAc,EAAE,CAAC;YACxC,IAAI,SAAS,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC;gBAC3B,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,KAAK,EAAE,qBAAqB,MAAM,EAAE,EAAE,CAAC;YAC1E,CAAC;QACH,CAAC;IACH,CAAC;IAED,MAAM,UAAU,GAAG,IAAA,gBAAI,EAAC,OAAO,EAAE,cAAc,CAAC,CAAC;IACjD,MAAM,SAAS,GAAG,IAAA,oBAAU,EAAC,UAAU,CAAC;QACtC,CAAC,CAAE,IAAA,sBAAY,EAAC,UAAU,CAAY;QACtC,CAAC,CAAC,IAAI,CAAC;IAET,MAAM,MAAM,GAAG,SAAS,CAAC,MAAM,IAAI,SAAS,CAAC;IAC7C,IAAI,CAAC,2BAA2B,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC;QAC9C,OAAO;YACL,IAAI;YACJ,MAAM,EAAE,QAAQ;YAChB,KAAK,EAAE,0BAA0B,MAAM,mEAAmE;SAC3G,CAAC;IACJ,CAAC;IAED,MAAM,WAAW,GACf,OAAO,CAAC,WAAW;QACnB,SAAS,CAAC,WAAW;QACrB,GAAG,IAAI,UAAU,MAAM,GAAG,CAAC;IAE7B,MAAM,SAAS,GAAG,OAAO,CAAC,SAAS,IAAI,IAAI,CAAC;IAE5C,IAAI,MAAM,GAAkB,IAAI,CAAC;IACjC,MAAM,UAAU,GAAG,IAAA,gBAAI,EAAC,OAAO,EAAE,WAAW,CAAC,CAAC;IAC9C,IAAI,IAAA,oBAAU,EAAC,UAAU,CAAC,EAAE,CAAC;QAC3B,MAAM,GAAG,IAAA,sBAAY,EAAC,UAAU,EAAE,OAAO,CAAC,CAAC;IAC7C,CAAC;IAED,IAAI,CAAC;QACH,MAAM,MAAM,GAAG,MAAM,IAAA,uBAAW,EAAC;YAC/B,IAAI;YACJ,MAAM;YACN,OAAO,EAAE,SAAS,CAAC,OAAO,IAAI,OAAO;YACrC,QAAQ,EAAE,SAAS,CAAC,QAAQ,IAAI,SAAS;YACzC,WAAW;YACX,SAAS;YACT,SAAS;YACT,MAAM;YACN,SAAS;SACV,CAAC,CAAC;QAEH,IAAA,uBAAa,EACX,IAAA,gBAAI,EAAC,OAAO,EAAE,sBAAsB,CAAC,EACrC,IAAI,CAAC,SAAS,CACZ;YACE,QAAQ,EAAE,MAAM,CAAC,EAAE;YACnB,KAAK,EAAE,MAAM,CAAC,KAAK;YACnB,OAAO,EAAE,MAAM,CAAC,OAAO;YACvB,YAAY,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE;SACvC,EACD,IAAI,EACJ,CAAC,CACF,GAAG,IAAI,CACT,CAAC;QAEF,MAAM,MAAM,GAAG,MAAM,CAAC,QAAQ,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,SAAS,CAAC;QAEvD,IAAI,CAAC,OAAO,CAAC,SAAS,EAAE,CAAC;YACvB,IAAI,CAAC;gBACH,MAAM,cAAc,GAAG;oBACrB,KAAK,EAAE,GAAG;oBACV,YAAY,EAAE,GAAG;oBACjB,YAAY,EAAE,GAAG;oBACjB,aAAa,EAAE,GAAG;oBAClB,mBAAmB,EAAE,GAAG;iBACzB,CAAC;gBACF,MAAM,IAAA,uBAAW,EAAC,MAAM,CAAC,EAAE,EAAE,cAAc,CAAC,CAAC;gBAC7C,MAAM,IAAA,6BAAiB,EAAC,MAAM,CAAC,EAAE,CAAC,CAAC;YACrC,CAAC;YAAC,MAAM,CAAC;gBACP,mCAAmC;YACrC,CAAC;QACH,CAAC;QAED,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,CAAC;IAC1B,CAAC;IAAC,OAAO,GAAQ,EAAE,CAAC;QAClB,OAAO,EAAE,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,KAAK,EAAE,GAAG,CAAC,OAAO,EAAE,CAAC;IACxD,CAAC;AACH,CAAC;AAEY,QAAA,cAAc,GAAG,IAAI,mBAAO,CAAC,SAAS,CAAC;KACjD,WAAW,CAAC,kCAAkC,CAAC;KAC/C,QAAQ,CAAC,QAAQ,EAAE,8CAA8C,CAAC;KAClE,MAAM,CAAC,sBAAsB,EAAE,kBAAkB,CAAC;KAClD,MAAM,CAAC,oBAAoB,EAAE,kDAAkD,CAAC;KAChF,MAAM,CAAC,cAAc,EAAE,4DAA4D,CAAC;KACpF,MAAM,CAAC,OAAO,EAAE,gDAAgD,CAAC;KACjE,MAAM,CAAC,KAAK,EAAE,IAAwB,EAAE,OAAuB,EAAE,EAAE;IAClE,IAAI,CAAC,IAAI,IAAI,CAAC,OAAO,CAAC,GAAG,EAAE,CAAC;QAC1B,OAAO,CAAC,KAAK,CAAC,wDAAwD,CAAC,CAAC;QACxE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,MAAM,IAAI,GAAG,IAAA,0BAAc,GAAE,CAAC;IAC9B,MAAM,MAAM,GAAG,IAAA,sBAAU,EAAC,IAAI,CAAC,CAAC;IAEhC,IAAI,CAAC,OAAO,CAAC,GAAG,IAAI,IAAI,EAAE,CAAC;QACzB,MAAM,OAAO,GAAG,IAAA,gBAAI,EAAC,IAAI,EAAE,MAAM,CAAC,SAAS,EAAE,IAAI,CAAC,CAAC;QACnD,MAAM,aAAa,GAAG,IAAA,gBAAI,EAAC,OAAO,EAAE,gBAAgB,CAAC,CAAC;QAEtD,IAAI,CAAC,IAAA,oBAAU,EAAC,aAAa,CAAC,EAAE,CAAC;YAC/B,OAAO,CAAC,cAAc,CAAC;gBACrB,IAAI,EAAE,OAAO;gBACb,OAAO,EAAE,SAAS,IAAI,aAAa;gBACnC,IAAI,EAAE,aAAa;gBACnB,UAAU,EAAE,oBAAoB,GAAG,IAAI,GAAG,2BAA2B;aACtE,CAAC,CAAC;YACH,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAClB,CAAC;QAED,MAAM,SAAS,GAAG,IAAI,CAAC,KAAK,CAAC,IAAA,sBAAY,EAAC,aAAa,EAAE,OAAO,CAAC,CAAC,CAAC;QACnE,IAAI,SAAS,CAAC,QAAQ,KAAK,QAAQ,EAAE,CAAC;YACpC,MAAM,GAAG,GAAG,SAAS,CAAC,OAAO,CAAC;YAC9B,IAAI,CAAC,GAAG,IAAI,CAAC,KAAK,CAAC,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,IAAI,GAAG,CAAC,cAAc,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;gBAClF,OAAO,CAAC,cAAc,CAAC;oBACrB,IAAI,EAAE,OAAO;oBACb,OAAO,EAAE,gBAAgB,IAAI,4CAA4C;oBACzE,IAAI,EAAE,aAAa;oBACnB,UAAU,EAAE,8CAA8C;iBAC3D,CAAC,CAAC;gBACH,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;YAClB,CAAC;YACD,MAAM,SAAS,GAAG,8HAA8H,CAAC;YACjJ,KAAK,MAAM,MAAM,IAAI,GAAG,CAAC,cAAc,EAAE,CAAC;gBACxC,IAAI,SAAS,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC;oBAC3B,OAAO,CAAC,cAAc,CAAC;wBACrB,IAAI,EAAE,OAAO;wBACb,OAAO,EAAE,gBAAgB,IAAI,2BAA2B,MAAM,EAAE;wBAChE,IAAI,EAAE,aAAa;wBACnB,UAAU,EAAE,oDAAoD;qBACjE,CAAC,CAAC;oBACH,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;gBAClB,CAAC;YACH,CAAC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AAM,MAAM,GAAG,MAAM,IAAA,kCAAsB,EAAC,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;gBAC3D,OAAO,CAAC,QAAQ,CAAC,sBAAsB,EAAE,MAAM,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC;gBAClE,OAAO,CAAC,QAAQ,CAAC,iBAAiB,EAAE,MAAM,CAAC,MAAM,CAAC,eAAe,CAAC,CAAC,CAAC;YACtE,CAAC;YAAC,MAAM,CAAC;gBACP,YAAY;YACd,CAAC;QACH,CAAC;aAAM,CAAC;YACN,OAAO,CAAC,IAAI,CACV,2EAA2E,GAAG,IAAI,CACnF,CAAC;QACJ,CAAC;QAED,IAAA,+CAA2B,GAAE,CAAC,KAAK,CAAC,GAAG,EAAE,GAAE,CAAC,CAAC,CAAC;IAChD,CAAC;AACH,CAAC,CAAC,CAAC"}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"wrap.d.ts","sourceRoot":"","sources":["../../src/commands/wrap.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;
|
|
1
|
+
{"version":3,"file":"wrap.d.ts","sourceRoot":"","sources":["../../src/commands/wrap.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAqDpC,eAAO,MAAM,WAAW,SAiJpB,CAAC"}
|
package/dist/commands/wrap.js
CHANGED
|
@@ -38,9 +38,45 @@ const commander_1 = require("commander");
|
|
|
38
38
|
const node_fs_1 = require("node:fs");
|
|
39
39
|
const node_path_1 = require("node:path");
|
|
40
40
|
const node_crypto_1 = require("node:crypto");
|
|
41
|
+
const node_readline_1 = require("node:readline");
|
|
41
42
|
const display = __importStar(require("../utils/display.js"));
|
|
42
43
|
const config_js_1 = require("../utils/config.js");
|
|
43
44
|
const scan_js_1 = require("./scan.js");
|
|
45
|
+
const domain_suggest_js_1 = require("../utils/domain-suggest.js");
|
|
46
|
+
async function resolveDomain(name, explicitDomain, defaultDomain, description) {
|
|
47
|
+
if (explicitDomain)
|
|
48
|
+
return explicitDomain;
|
|
49
|
+
const suggestions = (0, domain_suggest_js_1.suggestDomains)(name, description);
|
|
50
|
+
if (suggestions.length === 0)
|
|
51
|
+
return defaultDomain;
|
|
52
|
+
if (!process.stdin.isTTY) {
|
|
53
|
+
const best = suggestions[0].domain;
|
|
54
|
+
return best;
|
|
55
|
+
}
|
|
56
|
+
console.log();
|
|
57
|
+
display.info("Suggested domains based on gene name:");
|
|
58
|
+
suggestions.forEach((s, i) => {
|
|
59
|
+
const count = s.gene_count > 0 ? ` (${s.gene_count} genes)` : "";
|
|
60
|
+
console.log(` ${i + 1}. ${s.domain}${count}`);
|
|
61
|
+
});
|
|
62
|
+
console.log(` ${suggestions.length + 1}. [enter a new domain]`);
|
|
63
|
+
console.log();
|
|
64
|
+
const rl = (0, node_readline_1.createInterface)({ input: process.stdin, output: process.stdout });
|
|
65
|
+
const answer = await new Promise((resolve) => {
|
|
66
|
+
rl.question(`Select [1-${suggestions.length + 1}] or type domain: `, (ans) => {
|
|
67
|
+
rl.close();
|
|
68
|
+
resolve(ans.trim());
|
|
69
|
+
});
|
|
70
|
+
});
|
|
71
|
+
const idx = parseInt(answer, 10);
|
|
72
|
+
if (idx >= 1 && idx <= suggestions.length) {
|
|
73
|
+
return suggestions[idx - 1].domain;
|
|
74
|
+
}
|
|
75
|
+
if (answer && /^[a-z0-9]+(\.[a-z0-9]+)*$/.test(answer)) {
|
|
76
|
+
return answer;
|
|
77
|
+
}
|
|
78
|
+
return suggestions[0].domain;
|
|
79
|
+
}
|
|
44
80
|
exports.wrapCommand = new commander_1.Command("wrap")
|
|
45
81
|
.description("Wrap a function as a Rotifer gene (generates Phenotype), or a SKILL.md as a gene")
|
|
46
82
|
.argument("<name>", "function/gene directory name, or gene name when using --from-skill")
|
|
@@ -50,7 +86,7 @@ exports.wrapCommand = new commander_1.Command("wrap")
|
|
|
50
86
|
.action(async (name, options) => {
|
|
51
87
|
const root = (0, config_js_1.getProjectRoot)();
|
|
52
88
|
const config = (0, config_js_1.loadConfig)(root);
|
|
53
|
-
const domain = options.domain
|
|
89
|
+
const domain = await resolveDomain(name, options.domain, config.default_domain || "general");
|
|
54
90
|
display.header("Gene Wrapper");
|
|
55
91
|
const geneDir = (0, node_path_1.join)(root, config.genes_dir, name);
|
|
56
92
|
if (options.fromSkill) {
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"wrap.js","sourceRoot":"","sources":["../../src/commands/wrap.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,yCAAoC;AACpC,qCAA2F;AAC3F,yCAAoD;AACpD,6CAAyC;AACzC,6DAA+C;AAC/C,kDAAgE;AAChE,uCAAkD;
|
|
1
|
+
{"version":3,"file":"wrap.js","sourceRoot":"","sources":["../../src/commands/wrap.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,yCAAoC;AACpC,qCAA2F;AAC3F,yCAAoD;AACpD,6CAAyC;AACzC,iDAAgD;AAChD,6DAA+C;AAC/C,kDAAgE;AAChE,uCAAkD;AAClD,kEAA4D;AAE5D,KAAK,UAAU,aAAa,CAC1B,IAAY,EACZ,cAAkC,EAClC,aAAqB,EACrB,WAAoB;IAEpB,IAAI,cAAc;QAAE,OAAO,cAAc,CAAC;IAE1C,MAAM,WAAW,GAAG,IAAA,kCAAc,EAAC,IAAI,EAAE,WAAW,CAAC,CAAC;IACtD,IAAI,WAAW,CAAC,MAAM,KAAK,CAAC;QAAE,OAAO,aAAa,CAAC;IAEnD,IAAI,CAAC,OAAO,CAAC,KAAK,CAAC,KAAK,EAAE,CAAC;QACzB,MAAM,IAAI,GAAG,WAAW,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;QACnC,OAAO,IAAI,CAAC;IACd,CAAC;IAED,OAAO,CAAC,GAAG,EAAE,CAAC;IACd,OAAO,CAAC,IAAI,CAAC,uCAAuC,CAAC,CAAC;IACtD,WAAW,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE;QAC3B,MAAM,KAAK,GAAG,CAAC,CAAC,UAAU,GAAG,CAAC,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,UAAU,SAAS,CAAC,CAAC,CAAC,EAAE,CAAC;QACjE,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC,MAAM,GAAG,KAAK,EAAE,CAAC,CAAC;IACjD,CAAC,CAAC,CAAC;IACH,OAAO,CAAC,GAAG,CAAC,KAAK,WAAW,CAAC,MAAM,GAAG,CAAC,wBAAwB,CAAC,CAAC;IACjE,OAAO,CAAC,GAAG,EAAE,CAAC;IAEd,MAAM,EAAE,GAAG,IAAA,+BAAe,EAAC,EAAE,KAAK,EAAE,OAAO,CAAC,KAAK,EAAE,MAAM,EAAE,OAAO,CAAC,MAAM,EAAE,CAAC,CAAC;IAC7E,MAAM,MAAM,GAAG,MAAM,IAAI,OAAO,CAAS,CAAC,OAAO,EAAE,EAAE;QACnD,EAAE,CAAC,QAAQ,CAAC,aAAa,WAAW,CAAC,MAAM,GAAG,CAAC,oBAAoB,EAAE,CAAC,GAAG,EAAE,EAAE;YAC3E,EAAE,CAAC,KAAK,EAAE,CAAC;YACX,OAAO,CAAC,GAAG,CAAC,IAAI,EAAE,CAAC,CAAC;QACtB,CAAC,CAAC,CAAC;IACL,CAAC,CAAC,CAAC;IAEH,MAAM,GAAG,GAAG,QAAQ,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC;IACjC,IAAI,GAAG,IAAI,CAAC,IAAI,GAAG,IAAI,WAAW,CAAC,MAAM,EAAE,CAAC;QAC1C,OAAO,WAAW,CAAC,GAAG,GAAG,CAAC,CAAC,CAAC,MAAM,CAAC;IACrC,CAAC;IACD,IAAI,MAAM,IAAI,2BAA2B,CAAC,IAAI,CAAC,MAAM,CAAC,EAAE,CAAC;QACvD,OAAO,MAAM,CAAC;IAChB,CAAC;IACD,OAAO,WAAW,CAAC,CAAC,CAAC,CAAC,MAAM,CAAC;AAC/B,CAAC;AAEY,QAAA,WAAW,GAAG,IAAI,mBAAO,CAAC,MAAM,CAAC;KAC3C,WAAW,CAAC,kFAAkF,CAAC;KAC/F,QAAQ,CAAC,QAAQ,EAAE,oEAAoE,CAAC;KACxF,MAAM,CAAC,uBAAuB,EAAE,wBAAwB,CAAC;KACzD,MAAM,CAAC,oBAAoB,EAAE,gBAAgB,EAAE,SAAS,CAAC;KACzD,MAAM,CAAC,qBAAqB,EAAE,sEAAsE,CAAC;KACrG,MAAM,CAAC,KAAK,EAAE,IAAY,EAAE,OAAkE,EAAE,EAAE;IACjG,MAAM,IAAI,GAAG,IAAA,0BAAc,GAAE,CAAC;IAC9B,MAAM,MAAM,GAAG,IAAA,sBAAU,EAAC,IAAI,CAAC,CAAC;IAChC,MAAM,MAAM,GAAG,MAAM,aAAa,CAAC,IAAI,EAAE,OAAO,CAAC,MAAM,EAAE,MAAM,CAAC,cAAc,IAAI,SAAS,CAAC,CAAC;IAE7F,OAAO,CAAC,MAAM,CAAC,cAAc,CAAC,CAAC;IAE/B,MAAM,OAAO,GAAG,IAAA,gBAAI,EAAC,IAAI,EAAE,MAAM,CAAC,SAAS,EAAE,IAAI,CAAC,CAAC;IAEnD,IAAI,OAAO,CAAC,SAAS,EAAE,CAAC;QACtB,MAAM,SAAS,GAAG,IAAA,mBAAO,EAAC,IAAI,EAAE,OAAO,CAAC,SAAS,CAAC,CAAC;QACnD,MAAM,SAAS,GAAG,SAAS,CAAC,QAAQ,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,IAAA,gBAAI,EAAC,SAAS,EAAE,UAAU,CAAC,CAAC;QAC3F,IAAI,CAAC,IAAA,oBAAU,EAAC,SAAS,CAAC,EAAE,CAAC;YAC3B,OAAO,CAAC,cAAc,CAAC;gBACrB,IAAI,EAAE,OAAO;gBACb,OAAO,EAAE,oBAAoB;gBAC7B,IAAI,EAAE,SAAS;gBACf,UAAU,EAAE,oEAAoE;gBAChF,OAAO,EAAE,gCAAgC;aAC1C,CAAC,CAAC;YACH,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAClB,CAAC;QACD,MAAM,OAAO,GAAG,IAAA,sBAAY,EAAC,SAAS,EAAE,OAAO,CAAC,CAAC;QACjD,MAAM,MAAM,GAAG,IAAA,+BAAqB,EAAC,OAAO,CAAC,CAAC;QAC9C,IAAI,CAAC,MAAM,EAAE,CAAC;YACZ,OAAO,CAAC,cAAc,CAAC;gBACrB,IAAI,EAAE,OAAO;gBACb,OAAO,EAAE,wDAAwD;gBACjE,IAAI,EAAE,SAAS;gBACf,UAAU,EAAE,oDAAoD;gBAChE,OAAO,EAAE,gCAAgC;aAC1C,CAAC,CAAC;YACH,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;QAClB,CAAC;QACD,IAAI,CAAC,IAAA,oBAAU,EAAC,OAAO,CAAC,EAAE,CAAC;YACzB,IAAA,mBAAS,EAAC,OAAO,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;QAC1C,CAAC;QACD,MAAM,SAAS,GAA4B;YACzC,MAAM;YACN,WAAW,EAAE,MAAM,CAAC,WAAW,IAAI,GAAG,MAAM,CAAC,IAAI,wBAAwB;YACzE,WAAW,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,UAAU,EAAE,EAAE,MAAM,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,EAAE,EAAE,QAAQ,EAAE,EAAc,EAAE;YACrG,YAAY,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,UAAU,EAAE,EAAE,MAAM,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,EAAE,EAAE;YAC5E,YAAY,EAAE,EAAc;YAC5B,OAAO,EAAE,OAAO;YAChB,MAAM,EAAE,MAAM,CAAC,MAAM;YACrB,SAAS,EAAE,IAAI,CAAC,GAAG,EAAE;YACrB,QAAQ,EAAE,OAAO,CAAC,QAAQ;YAC1B,YAAY,EAAE,MAAM;YACpB,MAAM,EAAE,OAAgB;SACzB,CAAC;QACF,IAAI,OAAO,CAAC,QAAQ,KAAK,QAAQ,EAAE,CAAC;YAClC,SAAS,CAAC,OAAO,GAAG;gBAClB,cAAc,EAAE,EAAE;gBAClB,YAAY,EAAE,KAAK;gBACnB,gBAAgB,EAAE,OAAO;gBACzB,iBAAiB,EAAE,EAAE;aACtB,CAAC;QACJ,CAAC;QACD,MAAM,YAAY,GAAG,IAAI,CAAC,SAAS,CAAC,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC;QACxD,MAAM,MAAM,GAAG,IAAA,wBAAU,EAAC,QAAQ,CAAC,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;QACvE,IAAA,uBAAa,EAAC,IAAA,gBAAI,EAAC,OAAO,EAAE,gBAAgB,CAAC,EAAE,YAAY,GAAG,IAAI,CAAC,CAAC;QACpE,IAAA,sBAAY,EAAC,SAAS,EAAE,IAAA,gBAAI,EAAC,OAAO,EAAE,UAAU,CAAC,CAAC,CAAC;QACnD,IAAA,uBAAa,EACX,IAAA,gBAAI,EAAC,OAAO,EAAE,qBAAqB,CAAC,EACpC,IAAI,CAAC,SAAS,CACZ,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,OAAO,CAAC,QAAQ,EAAE,SAAS,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,EAAE,SAAS,EAAE,IAAA,oBAAQ,EAAC,IAAI,EAAE,SAAS,CAAC,EAAE,EAC/H,IAAI,EACJ,CAAC,CACF,GAAG,IAAI,CACT,CAAC;QACF,OAAO,CAAC,OAAO,CAAC,UAAU,MAAM,CAAC,IAAI,sBAAsB,IAAI,GAAG,CAAC,CAAC;QACpE,OAAO,CAAC,QAAQ,CAAC,SAAS,EAAE,OAAO,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC;QACpD,OAAO,CAAC,QAAQ,CAAC,QAAQ,EAAE,MAAM,CAAC,CAAC;QACnC,OAAO,CAAC,QAAQ,CAAC,UAAU,EAAE,OAAO,CAAC,QAAQ,CAAC,CAAC;QAC/C,OAAO,CAAC,GAAG,EAAE,CAAC;QACd,OAAO,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;QAC5B,OAAO,CAAC,IAAI,CAAC,oBAAoB,GAAG,IAAI,GAAG,kCAAkC,CAAC,CAAC;QAC/E,OAAO,CAAC,IAAI,CAAC,oBAAoB,GAAG,IAAI,GAAG,6BAA6B,CAAC,CAAC;QAC1E,OAAO;IACT,CAAC;IAED,IAAI,CAAC,IAAA,oBAAU,EAAC,OAAO,CAAC,EAAE,CAAC;QACzB,OAAO,CAAC,cAAc,CAAC;YACrB,IAAI,EAAE,OAAO;YACb,OAAO,EAAE,mBAAmB,IAAI,aAAa;YAC7C,IAAI,EAAE,OAAO;YACb,UAAU,EAAE,wCAAwC,OAAO,EAAE;YAC7D,OAAO,EAAE,gCAAgC;SAC1C,CAAC,CAAC;QACH,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAClB,CAAC;IAED,MAAM,aAAa,GAAG,IAAA,gBAAI,EAAC,OAAO,EAAE,gBAAgB,CAAC,CAAC;IACtD,IAAI,SAAkC,CAAC;IAEvC,IAAI,IAAA,oBAAU,EAAC,aAAa,CAAC,EAAE,CAAC;QAC9B,SAAS,GAAG,IAAI,CAAC,KAAK,CAAC,IAAA,sBAAY,EAAC,aAAa,EAAE,OAAO,CAAC,CAAC,CAAC;QAC7D,SAAS,CAAC,MAAM,GAAG,MAAM,CAAC;IAC5B,CAAC;SAAM,CAAC;QACN,SAAS,GAAG;YACV,MAAM;YACN,WAAW,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,UAAU,EAAE,EAAE,EAAE,QAAQ,EAAE,EAAE,EAAE;YAC7D,YAAY,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE;YAChC,YAAY,EAAE,EAAE;YAChB,OAAO,EAAE,OAAO;YAChB,MAAM,EAAE,MAAM,CAAC,MAAM;YACrB,SAAS,EAAE,IAAI,CAAC,GAAG,EAAE;YACrB,QAAQ,EAAE,OAAO,CAAC,QAAQ;YAC1B,YAAY,EAAE,MAAM;SACrB,CAAC;QACF,IAAI,OAAO,CAAC,QAAQ,KAAK,QAAQ,EAAE,CAAC;YAClC,SAAS,CAAC,OAAO,GAAG;gBAClB,cAAc,EAAE,EAAE;gBAClB,YAAY,EAAE,KAAK;gBACnB,gBAAgB,EAAE,OAAO;gBACzB,iBAAiB,EAAE,EAAE;aACtB,CAAC;QACJ,CAAC;IACH,CAAC;IAED,MAAM,YAAY,GAAG,IAAI,CAAC,SAAS,CAAC,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC,CAAC;IACxD,MAAM,MAAM,GAAG,IAAA,wBAAU,EAAC,QAAQ,CAAC,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC;IAEvE,IAAA,uBAAa,EAAC,aAAa,EAAE,YAAY,GAAG,IAAI,CAAC,CAAC;IAClD,IAAA,uBAAa,EACX,IAAA,gBAAI,EAAC,OAAO,EAAE,qBAAqB,CAAC,EACpC,IAAI,CAAC,SAAS,CAAC,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,OAAO,CAAC,QAAQ,EAAE,SAAS,EAAE,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,EAAE,EAAE,IAAI,EAAE,CAAC,CAAC,GAAG,IAAI,CAC1H,CAAC;IAEF,OAAO,CAAC,OAAO,CAAC,SAAS,IAAI,wBAAwB,CAAC,CAAC;IACvD,OAAO,CAAC,QAAQ,CAAC,SAAS,EAAE,OAAO,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC;IACpD,OAAO,CAAC,QAAQ,CAAC,QAAQ,EAAE,MAAM,CAAC,CAAC;IACnC,OAAO,CAAC,QAAQ,CAAC,UAAU,EAAE,OAAO,CAAC,QAAQ,CAAC,CAAC;IAE/C,OAAO,CAAC,GAAG,EAAE,CAAC;IACd,OAAO,CAAC,IAAI,CAAC,aAAa,CAAC,CAAC;IAC5B,OAAO,CAAC,IAAI,CAAC,iBAAiB,GAAG,IAAI,CAAC,CAAC;IACvC,OAAO,CAAC,IAAI,CAAC,oBAAoB,GAAG,IAAI,GAAG,8BAA8B,CAAC,CAAC;IAC3E,OAAO,CAAC,IAAI,CAAC,oBAAoB,GAAG,IAAI,GAAG,+CAA+C,CAAC,CAAC;AAC9F,CAAC,CAAC,CAAC"}
|
|
@@ -0,0 +1,18 @@
|
|
|
1
|
+
export interface DomainEntry {
|
|
2
|
+
domain: string;
|
|
3
|
+
description?: string;
|
|
4
|
+
gene_count: number;
|
|
5
|
+
}
|
|
6
|
+
export declare function loadDomainCache(): DomainEntry[];
|
|
7
|
+
export declare function saveDomainCache(domains: DomainEntry[]): void;
|
|
8
|
+
/**
|
|
9
|
+
* Suggest domains from local cache based on gene name keywords.
|
|
10
|
+
* Returns top matches sorted by relevance.
|
|
11
|
+
*/
|
|
12
|
+
export declare function suggestDomains(geneName: string, description?: string, limit?: number): DomainEntry[];
|
|
13
|
+
/**
|
|
14
|
+
* Fire-and-forget: fetch domain_registry from cloud and update local cache.
|
|
15
|
+
* Swallows all errors to never disrupt the caller.
|
|
16
|
+
*/
|
|
17
|
+
export declare function refreshDomainCacheFromCloud(): Promise<void>;
|
|
18
|
+
//# sourceMappingURL=domain-suggest.d.ts.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"domain-suggest.d.ts","sourceRoot":"","sources":["../../src/utils/domain-suggest.ts"],"names":[],"mappings":"AAWA,MAAM,WAAW,WAAW;IAC1B,MAAM,EAAE,MAAM,CAAC;IACf,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,wBAAgB,eAAe,IAAI,WAAW,EAAE,CAW/C;AAED,wBAAgB,eAAe,CAAC,OAAO,EAAE,WAAW,EAAE,GAAG,IAAI,CAQ5D;AAED;;;GAGG;AACH,wBAAgB,cAAc,CAC5B,QAAQ,EAAE,MAAM,EAChB,WAAW,CAAC,EAAE,MAAM,EACpB,KAAK,GAAE,MAAU,GAChB,WAAW,EAAE,CAmCf;AA0BD;;;GAGG;AACH,wBAAsB,2BAA2B,IAAI,OAAO,CAAC,IAAI,CAAC,CAsBjE"}
|
|
@@ -0,0 +1,121 @@
|
|
|
1
|
+
"use strict";
|
|
2
|
+
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
|
+
exports.loadDomainCache = loadDomainCache;
|
|
4
|
+
exports.saveDomainCache = saveDomainCache;
|
|
5
|
+
exports.suggestDomains = suggestDomains;
|
|
6
|
+
exports.refreshDomainCacheFromCloud = refreshDomainCacheFromCloud;
|
|
7
|
+
const node_fs_1 = require("node:fs");
|
|
8
|
+
const node_path_1 = require("node:path");
|
|
9
|
+
const client_js_1 = require("../cloud/client.js");
|
|
10
|
+
const ROTIFER_HOME = (0, node_path_1.join)(process.env.HOME || process.env.USERPROFILE || "/tmp", ".rotifer");
|
|
11
|
+
const CACHE_FILE = (0, node_path_1.join)(ROTIFER_HOME, "domain_registry.json");
|
|
12
|
+
const CACHE_MAX_AGE_MS = 24 * 60 * 60 * 1000; // 24h
|
|
13
|
+
function loadDomainCache() {
|
|
14
|
+
if (!(0, node_fs_1.existsSync)(CACHE_FILE))
|
|
15
|
+
return [];
|
|
16
|
+
try {
|
|
17
|
+
const raw = JSON.parse((0, node_fs_1.readFileSync)(CACHE_FILE, "utf-8"));
|
|
18
|
+
if (raw.updated_at && Date.now() - raw.updated_at > CACHE_MAX_AGE_MS) {
|
|
19
|
+
return raw.domains || [];
|
|
20
|
+
}
|
|
21
|
+
return raw.domains || [];
|
|
22
|
+
}
|
|
23
|
+
catch {
|
|
24
|
+
return [];
|
|
25
|
+
}
|
|
26
|
+
}
|
|
27
|
+
function saveDomainCache(domains) {
|
|
28
|
+
if (!(0, node_fs_1.existsSync)(ROTIFER_HOME)) {
|
|
29
|
+
(0, node_fs_1.mkdirSync)(ROTIFER_HOME, { recursive: true });
|
|
30
|
+
}
|
|
31
|
+
(0, node_fs_1.writeFileSync)(CACHE_FILE, JSON.stringify({ updated_at: Date.now(), domains }, null, 2) + "\n");
|
|
32
|
+
}
|
|
33
|
+
/**
|
|
34
|
+
* Suggest domains from local cache based on gene name keywords.
|
|
35
|
+
* Returns top matches sorted by relevance.
|
|
36
|
+
*/
|
|
37
|
+
function suggestDomains(geneName, description, limit = 3) {
|
|
38
|
+
const cache = loadDomainCache();
|
|
39
|
+
if (cache.length === 0)
|
|
40
|
+
return [];
|
|
41
|
+
const keywords = extractKeywords(geneName, description);
|
|
42
|
+
if (keywords.length === 0)
|
|
43
|
+
return [];
|
|
44
|
+
const scored = cache.map((entry) => {
|
|
45
|
+
let keywordScore = 0;
|
|
46
|
+
const domainParts = entry.domain.split(".");
|
|
47
|
+
const descWords = (entry.description || "").toLowerCase().split(/\s+/);
|
|
48
|
+
for (const kw of keywords) {
|
|
49
|
+
for (const dp of domainParts) {
|
|
50
|
+
if (dp === kw)
|
|
51
|
+
keywordScore += 10;
|
|
52
|
+
else if (dp.includes(kw) || kw.includes(dp))
|
|
53
|
+
keywordScore += 5;
|
|
54
|
+
}
|
|
55
|
+
for (const dw of descWords) {
|
|
56
|
+
if (dw === kw)
|
|
57
|
+
keywordScore += 3;
|
|
58
|
+
else if (dw.includes(kw))
|
|
59
|
+
keywordScore += 1;
|
|
60
|
+
}
|
|
61
|
+
}
|
|
62
|
+
const score = keywordScore > 0
|
|
63
|
+
? keywordScore + Math.min(entry.gene_count, 10) * 0.5
|
|
64
|
+
: 0;
|
|
65
|
+
return { entry, score };
|
|
66
|
+
});
|
|
67
|
+
return scored
|
|
68
|
+
.filter((s) => s.score > 0)
|
|
69
|
+
.sort((a, b) => b.score - a.score)
|
|
70
|
+
.slice(0, limit)
|
|
71
|
+
.map((s) => s.entry);
|
|
72
|
+
}
|
|
73
|
+
function extractKeywords(name, description) {
|
|
74
|
+
const parts = name
|
|
75
|
+
.toLowerCase()
|
|
76
|
+
.split(/[-_.]/)
|
|
77
|
+
.filter((p) => p.length > 2);
|
|
78
|
+
if (description) {
|
|
79
|
+
const descWords = description
|
|
80
|
+
.toLowerCase()
|
|
81
|
+
.split(/\s+/)
|
|
82
|
+
.filter((w) => w.length > 3 && !STOP_WORDS.has(w));
|
|
83
|
+
parts.push(...descWords.slice(0, 5));
|
|
84
|
+
}
|
|
85
|
+
return [...new Set(parts)];
|
|
86
|
+
}
|
|
87
|
+
const STOP_WORDS = new Set([
|
|
88
|
+
"the", "and", "for", "with", "that", "this", "from", "have", "will",
|
|
89
|
+
"been", "were", "being", "each", "which", "their", "about", "would",
|
|
90
|
+
"there", "could", "other", "into", "more", "some", "than", "them",
|
|
91
|
+
"gene", "rotifer", "function", "tool",
|
|
92
|
+
]);
|
|
93
|
+
/**
|
|
94
|
+
* Fire-and-forget: fetch domain_registry from cloud and update local cache.
|
|
95
|
+
* Swallows all errors to never disrupt the caller.
|
|
96
|
+
*/
|
|
97
|
+
async function refreshDomainCacheFromCloud() {
|
|
98
|
+
try {
|
|
99
|
+
const config = (0, client_js_1.loadCloudConfig)();
|
|
100
|
+
if (!config.endpoint || !config.anonKey)
|
|
101
|
+
return;
|
|
102
|
+
const base = config.endpoint.replace(/\/+$/, "");
|
|
103
|
+
const url = `${base}/rest/v1/domain_registry?select=domain,description,gene_count&order=gene_count.desc&limit=500`;
|
|
104
|
+
const res = await fetch(url, {
|
|
105
|
+
headers: {
|
|
106
|
+
apikey: config.anonKey,
|
|
107
|
+
"Content-Type": "application/json",
|
|
108
|
+
},
|
|
109
|
+
});
|
|
110
|
+
if (!res.ok)
|
|
111
|
+
return;
|
|
112
|
+
const data = (await res.json());
|
|
113
|
+
if (Array.isArray(data) && data.length > 0) {
|
|
114
|
+
saveDomainCache(data);
|
|
115
|
+
}
|
|
116
|
+
}
|
|
117
|
+
catch {
|
|
118
|
+
// intentionally swallowed
|
|
119
|
+
}
|
|
120
|
+
}
|
|
121
|
+
//# sourceMappingURL=domain-suggest.js.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
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|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@rotifer/playground",
|
|
3
|
-
"version": "0.7.
|
|
3
|
+
"version": "0.7.5",
|
|
4
4
|
"description": "Rotifer Protocol Playground — local development environment for gene development, Arena competition, and protocol simulation",
|
|
5
5
|
"license": "Apache-2.0",
|
|
6
6
|
"author": "Rotifer Protocol Contributors",
|