@rotifer/playground 0.5.0-alpha.2 → 0.7.1

package/dist/cloud/auth.js

@@ -1,6 +1,7 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.loadCredentials = loadCredentials;
+exports.refreshTokenIfNeeded = refreshTokenIfNeeded;
 exports.saveCredentials = saveCredentials;
 exports.clearCredentials = clearCredentials;
 exports.isLoggedIn = isLoggedIn;
@@ -22,6 +23,21 @@ function ensureRotiferHome() {
 function credentialsPath() {
     return (0, node_path_1.join)(ROTIFER_HOME, types_js_1.CREDENTIALS_FILE);
 }
+function loadCloudConfigForAuth() {
+    const configPath = (0, node_path_1.join)(ROTIFER_HOME, types_js_1.CLOUD_CONFIG_FILE);
+    if ((0, node_fs_1.existsSync)(configPath)) {
+        try {
+            return JSON.parse((0, node_fs_1.readFileSync)(configPath, "utf-8"));
+        }
+        catch {
+            /* fall through */
+        }
+    }
+    return {
+        endpoint: types_js_1.DEFAULT_CLOUD_ENDPOINT,
+        anonKey: process.env.ROTIFER_CLOUD_ANON_KEY || "",
+    };
+}
 function loadCredentials() {
     const path = credentialsPath();
     if (!(0, node_fs_1.existsSync)(path))
@@ -37,6 +53,53 @@ function loadCredentials() {
         return null;
     }
 }
+/**
+ * Attempt to refresh an expired token using the stored refresh_token.
+ * On success, saves new credentials to disk so subsequent sync reads
+ * pick up the fresh token automatically.
+ */
+async function refreshTokenIfNeeded() {
+    const path = credentialsPath();
+    if (!(0, node_fs_1.existsSync)(path))
+        return;
+    let data;
+    try {
+        data = JSON.parse((0, node_fs_1.readFileSync)(path, "utf-8"));
+    }
+    catch {
+        return;
+    }
+    if (!data.expires_at || Date.now() <= data.expires_at)
+        return;
+    if (!data.refresh_token)
+        return;
+    const config = loadCloudConfigForAuth();
+    const endpoint = config.endpoint.replace(/\/+$/, "");
+    try {
+        const res = await fetch(`${endpoint}/auth/v1/token?grant_type=refresh_token`, {
+            method: "POST",
+            headers: {
+                "Content-Type": "application/json",
+                apikey: config.anonKey,
+            },
+            body: JSON.stringify({ refresh_token: data.refresh_token }),
+        });
+        if (!res.ok)
+            return;
+        const result = (await res.json());
+        const newCreds = {
+            access_token: result.access_token,
+            refresh_token: result.refresh_token || data.refresh_token,
+            expires_at: Date.now() + (result.expires_in || 3600) * 1000,
+            provider: data.provider,
+            user: data.user,
+        };
+        saveCredentials(newCreds);
+    }
+    catch {
+        // Refresh failed silently — loadCredentials will return null
+    }
+}
 function saveCredentials(creds) {
     ensureRotiferHome();
     (0, node_fs_1.writeFileSync)(credentialsPath(), JSON.stringify(creds, null, 2) + "\n", {
@@ -53,7 +116,8 @@ function clearCredentials() {
 function isLoggedIn() {
     return loadCredentials() !== null;
 }
-function requireAuth() {
+async function requireAuth() {
+    await refreshTokenIfNeeded();
     const creds = loadCredentials();
     if (!creds) {
         throw new Error("Not logged in. Run 'rotifer login' first.");

package/dist/cloud/auth.js.map

@@ -1 +1 @@
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+{"version":3,"file":"auth.js","sourceRoot":"","sources":["../../src/cloud/auth.ts"],"names":[],"mappings":";;AAyCA,0CAaC;AAOD,oDA4CC;AAED,0CAKC;AAED,4CAMC;AAED,gCAEC;AAED,kCASC;AAED,oDAEC;AAED,sDAEC;AAMD,oDA+DC;AApND,qCAA6E;AAC7E,yCAAiC;AACjC,yCAAyC;AACzC,6CAAsD;AAEtD,yCAIoB;AAEpB,MAAM,YAAY,GAAG,IAAA,gBAAI,EACvB,OAAO,CAAC,GAAG,CAAC,IAAI,IAAI,OAAO,CAAC,GAAG,CAAC,WAAW,IAAI,MAAM,EACrD,UAAU,CACX,CAAC;AAEF,SAAS,iBAAiB;IACxB,IAAI,CAAC,IAAA,oBAAU,EAAC,YAAY,CAAC,EAAE,CAAC;QAC9B,IAAA,mBAAS,EAAC,YAAY,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC,CAAC;IAC/C,CAAC;AACH,CAAC;AAED,SAAS,eAAe;IACtB,OAAO,IAAA,gBAAI,EAAC,YAAY,EAAE,2BAAgB,CAAC,CAAC;AAC9C,CAAC;AAED,SAAS,sBAAsB;IAC7B,MAAM,UAAU,GAAG,IAAA,gBAAI,EAAC,YAAY,EAAE,4BAAiB,CAAC,CAAC;IACzD,IAAI,IAAA,oBAAU,EAAC,UAAU,CAAC,EAAE,CAAC;QAC3B,IAAI,CAAC;YACH,OAAO,IAAI,CAAC,KAAK,CAAC,IAAA,sBAAY,EAAC,UAAU,EAAE,OAAO,CAAC,CAAgB,CAAC;QACtE,CAAC;QAAC,MAAM,CAAC;YACP,kBAAkB;QACpB,CAAC;IACH,CAAC;IACD,OAAO;QACL,QAAQ,EAAE,iCAAsB;QAChC,OAAO,EAAE,OAAO,CAAC,GAAG,CAAC,sBAAsB,IAAI,EAAE;KAClD,CAAC;AACJ,CAAC;AAED,SAAgB,eAAe;IAC7B,MAAM,IAAI,GAAG,eAAe,EAAE,CAAC;IAC/B,IAAI,CAAC,IAAA,oBAAU,EAAC,IAAI,CAAC;QAAE,OAAO,IAAI,CAAC;IAEnC,IAAI,CAAC;QACH,MAAM,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,IAAA,sBAAY,EAAC,IAAI,EAAE,OAAO,CAAC,CAAqB,CAAC;QACzE,IAAI,IAAI,CAAC,UAAU,IAAI,IAAI,CAAC,GAAG,EAAE,GAAG,IAAI,CAAC,UAAU,EAAE,CAAC;YACpD,OAAO,IAAI,CAAC;QACd,CAAC;QACD,OAAO,IAAI,CAAC;IACd,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,IAAI,CAAC;IACd,CAAC;AACH,CAAC;AAED;;;;GAIG;AACI,KAAK,UAAU,oBAAoB;IACxC,MAAM,IAAI,GAAG,eAAe,EAAE,CAAC;IAC/B,IAAI,CAAC,IAAA,oBAAU,EAAC,IAAI,CAAC;QAAE,OAAO;IAE9B,IAAI,IAAsB,CAAC;IAC3B,IAAI,CAAC;QACH,IAAI,GAAG,IAAI,CAAC,KAAK,CAAC,IAAA,sBAAY,EAAC,IAAI,EAAE,OAAO,CAAC,CAAqB,CAAC;IACrE,CAAC;IAAC,MAAM,CAAC;QACP,OAAO;IACT,CAAC;IAED,IAAI,CAAC,IAAI,CAAC,UAAU,IAAI,IAAI,CAAC,GAAG,EAAE,IAAI,IAAI,CAAC,UAAU;QAAE,OAAO;IAC9D,IAAI,CAAC,IAAI,CAAC,aAAa;QAAE,OAAO;IAEhC,MAAM,MAAM,GAAG,sBAAsB,EAAE,CAAC;IACxC,MAAM,QAAQ,GAAG,MAAM,CAAC,QAAQ,CAAC,OAAO,CAAC,MAAM,EAAE,EAAE,CAAC,CAAC;IAErD,IAAI,CAAC;QACH,MAAM,GAAG,GAAG,MAAM,KAAK,CACrB,GAAG,QAAQ,yCAAyC,EACpD;YACE,MAAM,EAAE,MAAM;YACd,OAAO,EAAE;gBACP,cAAc,EAAE,kBAAkB;gBAClC,MAAM,EAAE,MAAM,CAAC,OAAO;aACvB;YACD,IAAI,EAAE,IAAI,CAAC,SAAS,CAAC,EAAE,aAAa,EAAE,IAAI,CAAC,aAAa,EAAE,CAAC;SAC5D,CACF,CAAC;QAEF,IAAI,CAAC,GAAG,CAAC,EAAE;YAAE,OAAO;QAEpB,MAAM,MAAM,GAAG,CAAC,MAAM,GAAG,CAAC,IAAI,EAAE,CAAwB,CAAC;QACzD,MAAM,QAAQ,GAAqB;YACjC,YAAY,EAAE,MAAM,CAAC,YAAY;YACjC,aAAa,EAAE,MAAM,CAAC,aAAa,IAAI,IAAI,CAAC,aAAa;YACzD,UAAU,EAAE,IAAI,CAAC,GAAG,EAAE,GAAG,CAAE,MAAM,CAAC,UAAqB,IAAI,IAAI,CAAC,GAAG,IAAI;YACvE,QAAQ,EAAE,IAAI,CAAC,QAAQ;YACvB,IAAI,EAAE,IAAI,CAAC,IAAI;SAChB,CAAC;QACF,eAAe,CAAC,QAAQ,CAAC,CAAC;IAC5B,CAAC;IAAC,MAAM,CAAC;QACP,6DAA6D;IAC/D,CAAC;AACH,CAAC;AAED,SAAgB,eAAe,CAAC,KAAuB;IACrD,iBAAiB,EAAE,CAAC;IACpB,IAAA,uBAAa,EAAC,eAAe,EAAE,EAAE,IAAI,CAAC,SAAS,CAAC,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC,GAAG,IAAI,EAAE;QACtE,IAAI,EAAE,KAAK;KACZ,CAAC,CAAC;AACL,CAAC;AAED,SAAgB,gBAAgB;IAC9B,MAAM,IAAI,GAAG,eAAe,EAAE,CAAC;IAC/B,IAAI,IAAA,oBAAU,EAAC,IAAI,CAAC,EAAE,CAAC;QACrB,IAAA,uBAAa,EAAC,IAAI,EAAE,EAAE,EAAE,EAAE,IAAI,EAAE,KAAK,EAAE,CAAC,CAAC;QACzC,OAAO,CAAC,SAAS,CAAC,CAAC,UAAU,CAAC,IAAI,CAAC,CAAC;IACtC,CAAC;AACH,CAAC;AAED,SAAgB,UAAU;IACxB,OAAO,eAAe,EAAE,KAAK,IAAI,CAAC;AACpC,CAAC;AAEM,KAAK,UAAU,WAAW;IAC/B,MAAM,oBAAoB,EAAE,CAAC;IAC7B,MAAM,KAAK,GAAG,eAAe,EAAE,CAAC;IAChC,IAAI,CAAC,KAAK,EAAE,CAAC;QACX,MAAM,IAAI,KAAK,CACb,2CAA2C,CAC5C,CAAC;IACJ,CAAC;IACD,OAAO,KAAK,CAAC;AACf,CAAC;AAED,SAAgB,oBAAoB;IAClC,OAAO,IAAA,yBAAW,EAAC,EAAE,CAAC,CAAC,QAAQ,CAAC,WAAW,CAAC,CAAC;AAC/C,CAAC;AAED,SAAgB,qBAAqB,CAAC,QAAgB;IACpD,OAAO,IAAA,wBAAU,EAAC,QAAQ,CAAC,CAAC,MAAM,CAAC,QAAQ,CAAC,CAAC,MAAM,CAAC,WAAW,CAAC,CAAC;AACnE,CAAC;AAED;;;GAGG;AACH,SAAgB,oBAAoB,CAAC,OAAe,IAAI;IACtD,OAAO,IAAI,OAAO,CAAC,CAAC,OAAO,EAAE,MAAM,EAAE,EAAE;QACrC,MAAM,MAAM,GAAG,IAAA,wBAAY,EAAC,CAAC,GAAG,EAAE,GAAG,EAAE,EAAE;YACvC,MAAM,GAAG,GAAG,IAAI,GAAG,CAAC,GAAG,CAAC,GAAG,IAAI,GAAG,EAAE,oBAAoB,IAAI,EAAE,CAAC,CAAC;YAEhE,IAAI,GAAG,CAAC,QAAQ,KAAK,iBAAiB,EAAE,CAAC;gBACvC,MAAM,KAAK,GAAG,GAAG,CAAC,YAAY,CAAC,GAAG,CAAC,cAAc,CAAC,CAAC;gBACnD,MAAM,OAAO,GAAG,GAAG,CAAC,YAAY,CAAC,GAAG,CAAC,eAAe,CAAC,CAAC;gBACtD,IAAI,KAAK,EAAE,CAAC;oBACV,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,cAAc,EAAE,WAAW,EAAE,CAAC,CAAC;oBACpD,GAAG,CAAC,GAAG,CACL,wCAAwC;wBACtC,8DAA8D;wBAC9D,gBAAgB,CACnB,CAAC;oBACF,MAAM,CAAC,KAAK,EAAE,CAAC;oBACf,OAAO,CAAC,YAAY,KAAK,IAAI,OAAO,IAAI,EAAE,EAAE,CAAC,CAAC;oBAC9C,OAAO;gBACT,CAAC;YACH,CAAC;YAED,MAAM,IAAI,GAAG,GAAG,CAAC,YAAY,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;YAC1C,IAAI,IAAI,EAAE,CAAC;gBACT,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,cAAc,EAAE,WAAW,EAAE,CAAC,CAAC;gBACpD,GAAG,CAAC,GAAG,CACL,wCAAwC;oBACtC,8DAA8D;oBAC9D,gBAAgB,CACnB,CAAC;gBACF,MAAM,CAAC,KAAK,EAAE,CAAC;gBACf,OAAO,CAAC,IAAI,CAAC,CAAC;YAChB,CAAC;iBAAM,CAAC;gBACN,GAAG,CAAC,SAAS,CAAC,GAAG,EAAE,EAAE,cAAc,EAAE,WAAW,EAAE,CAAC,CAAC;gBACpD,GAAG,CAAC,GAAG,CAAC;;;;;;;;;;;;;iFAaiE,CAAC,CAAC;YAC7E,CAAC;QACH,CAAC,CAAC,CAAC;QAEH,MAAM,CAAC,MAAM,CAAC,IAAI,EAAE,GAAG,EAAE;YACvB,eAAe;QACjB,CAAC,CAAC,CAAC;QAEH,MAAM,CAAC,EAAE,CAAC,OAAO,EAAE,CAAC,GAAG,EAAE,EAAE;YACzB,MAAM,CAAC,IAAI,KAAK,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package/dist/cloud/client.d.ts

@@ -18,7 +18,10 @@ export declare function publishGene(opts: {
     description: string;
     phenotype: Record<string, unknown>;
     wasmBytes: Buffer | null;
-}): Promise<CloudGene>;
+    readme?: string | null;
+}): Promise<CloudGene & {
+    isUpdate: boolean;
+}>;
 export declare function unpublishGene(id: string): Promise<void>;
 export declare function downloadGeneWasm(wasmUrl: string): Promise<Buffer>;
 export declare function arenaSubmit(geneId: string, fitness: FitnessReport): Promise<CloudArenaEntry>;

package/dist/cloud/client.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"client.d.ts","sourceRoot":"","sources":["../../src/cloud/client.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EACV,WAAW,EACX,SAAS,EACT,qBAAqB,EACrB,kBAAkB,EAClB,eAAe,EACf,aAAa,EACd,MAAM,YAAY,CAAC;AASpB,wBAAgB,eAAe,IAAI,WAAW,CAa7C;AAgDD,wBAAsB,SAAS,CAAC,OAAO,EAAE;IACvC,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB,GAAG,OAAO,CAAC,qBAAqB,CAAC,CA4CjC;AAED,wBAAsB,OAAO,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,CAAC,CAkC5D;AAED,wBAAsB,WAAW,CAAC,IAAI,EAAE;IACtC,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,MAAM,CAAC;IACf,OAAO,EAAE,MAAM,CAAC;IAChB,QAAQ,EAAE,MAAM,CAAC;IACjB,WAAW,EAAE,MAAM,CAAC;IACpB,SAAS,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACnC,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;CAC1B,GAAG,OAAO,CAAC,SAAS,CAAC,CA2ErB;AAED,wBAAsB,aAAa,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CAa7D;AAED,wBAAsB,gBAAgB,CAAC,OAAO,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAKvE;AAID,wBAAsB,WAAW,CAC/B,MAAM,EAAE,MAAM,EACd,OAAO,EAAE,aAAa,GACrB,OAAO,CAAC,eAAe,CAAC,CAuC1B;AAED,wBAAsB,aAAa,CAAC,OAAO,EAAE;IAC3C,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB,GAAG,OAAO,CAAC,kBAAkB,CAAC,CA2C9B;AAID,MAAM,WAAW,sBAAsB;IACrC,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,EAAE,MAAM,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,eAAe,EAAE,MAAM,CAAC;IACxB,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,EAAE,MAAM,CAAC;CACrB;AAED,MAAM,WAAW,2BAA2B;IAC1C,KAAK,EAAE,MAAM,CAAC;IACd,eAAe,EAAE,MAAM,CAAC;IACxB,eAAe,EAAE,MAAM,CAAC;IACxB,UAAU,EAAE,MAAM,CAAC;IACnB,eAAe,EAAE,MAAM,CAAC;CACzB;AAED,MAAM,WAAW,gBAAgB;IAC/B,QAAQ,EAAE,MAAM,CAAC;IACjB,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B,KAAK,EAAE,MAAM,CAAC;IACd,eAAe,EAAE,MAAM,CAAC;IACxB,eAAe,EAAE,MAAM,CAAC;IACxB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,wBAAsB,iBAAiB,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,sBAAsB,CAAC,CA0CvF;AAED,wBAAsB,sBAAsB,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,2BAA2B,CAAC,CAkCjG;AAED,wBAAsB,wBAAwB,CAAC,KAAK,GAAE,MAAW,GAAG,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAgB9F"}
+{"version":3,"file":"client.d.ts","sourceRoot":"","sources":["../../src/cloud/client.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EACV,WAAW,EACX,SAAS,EACT,qBAAqB,EACrB,kBAAkB,EAClB,eAAe,EACf,aAAa,EACd,MAAM,YAAY,CAAC;AASpB,wBAAgB,eAAe,IAAI,WAAW,CAa7C;AAgDD,wBAAsB,SAAS,CAAC,OAAO,EAAE;IACvC,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB,GAAG,OAAO,CAAC,qBAAqB,CAAC,CA4CjC;AAED,wBAAsB,OAAO,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,CAAC,CAkC5D;AAED,wBAAsB,WAAW,CAAC,IAAI,EAAE;IACtC,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,MAAM,CAAC;IACf,OAAO,EAAE,MAAM,CAAC;IAChB,QAAQ,EAAE,MAAM,CAAC;IACjB,WAAW,EAAE,MAAM,CAAC;IACpB,SAAS,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACnC,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;CACxB,GAAG,OAAO,CAAC,SAAS,GAAG;IAAE,QAAQ,EAAE,OAAO,CAAA;CAAE,CAAC,CAqF7C;AAED,wBAAsB,aAAa,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CAa7D;AAED,wBAAsB,gBAAgB,CAAC,OAAO,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAKvE;AAID,wBAAsB,WAAW,CAC/B,MAAM,EAAE,MAAM,EACd,OAAO,EAAE,aAAa,GACrB,OAAO,CAAC,eAAe,CAAC,CA0C1B;AAED,wBAAsB,aAAa,CAAC,OAAO,EAAE;IAC3C,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB,GAAG,OAAO,CAAC,kBAAkB,CAAC,CA8C9B;AAID,MAAM,WAAW,sBAAsB;IACrC,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,EAAE,MAAM,CAAC;IACpB,WAAW,EAAE,MAAM,CAAC;IACpB,eAAe,EAAE,MAAM,CAAC;IACxB,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,EAAE,MAAM,CAAC;CACrB;AAED,MAAM,WAAW,2BAA2B;IAC1C,KAAK,EAAE,MAAM,CAAC;IACd,eAAe,EAAE,MAAM,CAAC;IACxB,eAAe,EAAE,MAAM,CAAC;IACxB,UAAU,EAAE,MAAM,CAAC;IACnB,eAAe,EAAE,MAAM,CAAC;CACzB;AAED,MAAM,WAAW,gBAAgB;IAC/B,QAAQ,EAAE,MAAM,CAAC;IACjB,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B,KAAK,EAAE,MAAM,CAAC;IACd,eAAe,EAAE,MAAM,CAAC;IACxB,eAAe,EAAE,MAAM,CAAC;IACxB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,wBAAsB,iBAAiB,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,sBAAsB,CAAC,CA0CvF;AAED,wBAAsB,sBAAsB,CAAC,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,2BAA2B,CAAC,CAkCjG;AAED,wBAAsB,wBAAwB,CAAC,KAAK,GAAE,MAAW,GAAG,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAgB9F"}

package/dist/cloud/client.js

@@ -148,6 +148,7 @@ async function getGene(id) {
     };
 }
 async function publishGene(opts) {
+    await (0, auth_js_1.refreshTokenIfNeeded)();
     const creds = (0, auth_js_1.loadCredentials)();
     if (!creds)
         throw new Error("Not logged in. Run 'rotifer login' first.");
@@ -171,6 +172,9 @@ async function publishGene(opts) {
             throw new Error(`Failed to upload WASM: ${err}`);
         }
     }
+    const existCheck = await fetch(apiUrl(`/genes?owner_id=eq.${creds.user.id}&name=eq.${opts.name}&version=eq.${opts.version}&select=id`), { headers: authHeaders() });
+    const existData = existCheck.ok ? (await existCheck.json()) : [];
+    const isUpdate = existData.length > 0;
     const body = {
         owner_id: creds.user.id,
         name: opts.name,
@@ -183,11 +187,13 @@ async function publishGene(opts) {
         wasm_size: wasmSize,
         published: true,
     };
-    const res = await fetch(apiUrl("/genes"), {
+    if (opts.readme)
+        body.readme = opts.readme;
+    const res = await fetch(apiUrl("/genes?on_conflict=owner_id,name,version"), {
         method: "POST",
         headers: {
             ...authHeaders(true),
-            Prefer: "return=representation",
+            Prefer: "return=representation,resolution=merge-duplicates",
         },
         body: JSON.stringify(body),
     });
@@ -211,6 +217,7 @@ async function publishGene(opts) {
         reputation_score: row.reputation_score ?? null,
         created_at: row.created_at,
         updated_at: row.updated_at,
+        isUpdate,
     };
 }
 async function unpublishGene(id) {
@@ -266,6 +273,9 @@ async function arenaSubmit(geneId, fitness) {
         fidelity: gene.fidelity,
         fitness: row.fitness_value,
         safety: row.safety_score,
+        success_rate: row.success_rate ?? 0,
+        latency_score: row.latency_score ?? 0,
+        resource_efficiency: row.resource_efficiency ?? 0,
         reputation_score: gene.reputation_score ?? null,
         total_calls: row.total_calls,
         last_evaluated: row.last_evaluated,
@@ -273,7 +283,7 @@ async function arenaSubmit(geneId, fitness) {
 }
 async function arenaRankings(options) {
     const params = new URLSearchParams();
-    params.set("select", "fitness_value,safety_score,total_calls,last_evaluated,domain,genes(id,name,fidelity,reputation_score,profiles(username))");
+    params.set("select", "fitness_value,safety_score,success_rate,latency_score,resource_efficiency,total_calls,last_evaluated,domain,genes(id,name,fidelity,reputation_score,profiles(username))");
     params.set("order", "fitness_value.desc");
     if (options.domain)
         params.set("domain", `eq.${options.domain}`);
@@ -298,6 +308,9 @@ async function arenaRankings(options) {
         fidelity: row.genes?.fidelity || "Wrapped",
         fitness: row.fitness_value,
         safety: row.safety_score,
+        success_rate: row.success_rate,
+        latency_score: row.latency_score,
+        resource_efficiency: row.resource_efficiency,
         reputation_score: row.genes?.reputation_score ?? null,
         total_calls: row.total_calls || 0,
         last_evaluated: row.last_evaluated,

package/dist/cloud/client.js.map

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package/dist/cloud/types.d.ts

@@ -2,17 +2,19 @@ export interface CloudConfig {
     endpoint: string;
     anonKey: string;
 }
+export type AuthProvider = "github" | "gitlab" | "email";
 export interface CloudCredentials {
     access_token: string;
     refresh_token: string;
     expires_at: number;
+    provider: AuthProvider;
     user: CloudUser;
 }
 export interface CloudUser {
     id: string;
     username: string;
     avatar_url: string | null;
-    github_id: number;
+    provider_id: string;
 }
 export interface CloudGene {
     id: string;
@@ -46,6 +48,9 @@ export interface CloudArenaEntry {
     fidelity: string;
     fitness: number;
     safety: number;
+    success_rate: number;
+    latency_score: number;
+    resource_efficiency: number;
     reputation_score: number | null;
     total_calls: number;
     last_evaluated: string;

package/dist/cloud/types.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../src/cloud/types.ts"],"names":[],"mappings":"AAAA,MAAM,WAAW,WAAW;IAC1B,QAAQ,EAAE,MAAM,CAAC;IACjB,OAAO,EAAE,MAAM,CAAC;CACjB;AAED,MAAM,MAAM,YAAY,GAAG,QAAQ,GAAG,QAAQ,GAAG,OAAO,CAAC;AAEzD,MAAM,WAAW,gBAAgB;IAC/B,YAAY,EAAE,MAAM,CAAC;IACrB,aAAa,EAAE,MAAM,CAAC;IACtB,UAAU,EAAE,MAAM,CAAC;IACnB,QAAQ,EAAE,YAAY,CAAC;IACvB,IAAI,EAAE,SAAS,CAAC;CACjB;AAED,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,QAAQ,EAAE,MAAM,CAAC;IACjB,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B,WAAW,EAAE,MAAM,CAAC;CACrB;AAED,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;IACf,OAAO,EAAE,MAAM,CAAC;IAChB,QAAQ,EAAE,MAAM,CAAC;IACjB,WAAW,EAAE,MAAM,GAAG,IAAI,CAAC;IAC3B,SAAS,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACnC,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,gBAAgB,EAAE,MAAM,GAAG,IAAI,CAAC;IAChC,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,MAAM,WAAW,qBAAqB;IACpC,KAAK,EAAE,SAAS,EAAE,CAAC;IACnB,KAAK,EAAE,MAAM,CAAC;IACd,IAAI,EAAE,MAAM,CAAC;IACb,QAAQ,EAAE,MAAM,CAAC;CAClB;AAED,MAAM,WAAW,eAAe;IAC9B,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,CAAC;IAChB,SAAS,EAAE,MAAM,CAAC;IAClB,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE,MAAM,CAAC;IACjB,OAAO,EAAE,MAAM,CAAC;IAChB,MAAM,EAAE,MAAM,CAAC;IACf,YAAY,EAAE,MAAM,CAAC;IACrB,aAAa,EAAE,MAAM,CAAC;IACtB,mBAAmB,EAAE,MAAM,CAAC;IAC5B,gBAAgB,EAAE,MAAM,GAAG,IAAI,CAAC;IAChC,WAAW,EAAE,MAAM,CAAC;IACpB,cAAc,EAAE,MAAM,CAAC;CACxB;AAED,MAAM,WAAW,kBAAkB;IACjC,QAAQ,EAAE,eAAe,EAAE,CAAC;IAC5B,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,GAAG,IAAI,CAAC;CACvB;AAED,MAAM,WAAW,aAAa;IAC5B,KAAK,EAAE,MAAM,CAAC;IACd,YAAY,EAAE,MAAM,CAAC;IACrB,YAAY,EAAE,MAAM,CAAC;IACrB,aAAa,EAAE,MAAM,CAAC;IACtB,mBAAmB,EAAE,MAAM,CAAC;CAC7B;AAED,MAAM,WAAW,UAAU;IACzB,KAAK,EAAE;QACL,IAAI,EAAE,MAAM,CAAC;QACb,OAAO,EAAE,MAAM,CAAC;QAChB,MAAM,EAAE,MAAM,CAAC;KAChB,CAAC;CACH;AAED,eAAO,MAAM,sBAAsB,QACgC,CAAC;AACpE,eAAO,MAAM,gBAAgB,qBAAqB,CAAC;AACnD,eAAO,MAAM,iBAAiB,eAAe,CAAC"}

package/dist/cloud/types.js.map

@@ -1 +1 @@
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+{"version":3,"file":"types.js","sourceRoot":"","sources":["../../src/cloud/types.ts"],"names":[],"mappings":";;;AAsFa,QAAA,sBAAsB,GACjC,OAAO,CAAC,GAAG,CAAC,sBAAsB,IAAI,2BAA2B,CAAC;AACvD,QAAA,gBAAgB,GAAG,kBAAkB,CAAC;AACtC,QAAA,iBAAiB,GAAG,YAAY,CAAC"}

package/dist/commands/agent-create.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"agent-create.d.ts","sourceRoot":"","sources":["../../src/commands/agent-create.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAapC,eAAO,MAAM,kBAAkB,SAoJ5B,CAAC"}

package/dist/commands/agent-create.js

@@ -47,6 +47,8 @@ exports.agentCreateCommand = new commander_1.Command("create")
     .option("-d, --domain <domain>", "auto-select top genes from this domain")
     .option("-n, --top <n>", "number of top genes to auto-select", "2")
     .option("--strategy <strategy>", "gene selection strategy", "greedy")
+    .option("--composition <type>", "composition type: Seq, Par, Cond, Try", "Seq")
+    .option("--par-merge <strategy>", "merge strategy for Par: first, concat, merge", "first")
     .action(async (name, options) => {
     const root = (0, config_js_1.getProjectRoot)();
     const config = (0, config_js_1.loadConfig)(root);
@@ -88,13 +90,48 @@ exports.agentCreateCommand = new commander_1.Command("create")
             (options.domain ? ` (domain: ${options.domain})` : "") +
             ` [strategy: ${selectionMode}]`);
     }
-    const compositionType = genome.length >= 2 ? "Seq" : "Single";
+    // Schema compatibility pre-check for Seq pipelines
+    if (genome.length >= 2) {
+        const schemaWarnings = checkSchemaCompatibility(root, config.genes_dir, genome);
+        if (schemaWarnings.length > 0) {
+            display.warn("Schema compatibility warnings:");
+            for (const w of schemaWarnings) {
+                display.warn(`  ${w}`);
+            }
+            console.log();
+        }
+    }
+    const requestedComposition = options.composition || "Seq";
+    const compositionType = genome.length >= 2 ? requestedComposition : "Single";
+    let composition = { type: compositionType };
+    if (compositionType === "Par") {
+        composition = {
+            type: "Par",
+            branches: genome,
+            merge: options.parMerge || "first",
+        };
+    }
+    else if (compositionType === "Cond" && genome.length >= 2) {
+        composition = {
+            type: "Cond",
+            predicate: { field: "type", equals: "primary" },
+            thenBranch: genome[0],
+            elseBranch: genome[1],
+        };
+    }
+    else if (compositionType === "Try" && genome.length >= 2) {
+        composition = {
+            type: "Try",
+            primary: genome[0],
+            fallback: genome[1],
+        };
+    }
     const agent = {
         id: agentId,
         name,
         state: "Active",
         genome,
-        composition: compositionType,
+        composition,
         strategy: selectionMode,
         createdAt: new Date().toISOString(),
         reputation: 0.0,
@@ -104,8 +141,9 @@ exports.agentCreateCommand = new commander_1.Command("create")
     display.keyValue("Agent ID", agentId.slice(0, 12) + "...");
     display.keyValue("State", agent.state);
     display.keyValue("Strategy", selectionMode);
+    const separator = compositionType === "Par" ? " ∥ " : " → ";
     display.keyValue("Genome", genome.length > 0
-        ? genome.join(" → ") + ` (${compositionType})`
+        ? genome.join(separator) + ` (${compositionType})`
         : "(empty)");
     console.log();
     if (genome.length >= 2) {
@@ -146,4 +184,29 @@ function getArenaRankings(root, genesDir, domainFilter) {
     entries.sort((a, b) => b.fitness - a.fitness);
     return entries;
 }
+function checkSchemaCompatibility(root, genesDir, genome) {
+    const warnings = [];
+    for (let i = 0; i < genome.length - 1; i++) {
+        const producerName = genome[i];
+        const consumerName = genome[i + 1];
+        const producerPhenoPath = (0, node_path_1.join)(root, genesDir, producerName, "phenotype.json");
+        const consumerPhenoPath = (0, node_path_1.join)(root, genesDir, consumerName, "phenotype.json");
+        if (!(0, node_fs_1.existsSync)(producerPhenoPath) || !(0, node_fs_1.existsSync)(consumerPhenoPath))
+            continue;
+        try {
+            const producer = JSON.parse((0, node_fs_1.readFileSync)(producerPhenoPath, "utf-8"));
+            const consumer = JSON.parse((0, node_fs_1.readFileSync)(consumerPhenoPath, "utf-8"));
+            const outputProps = producer.outputSchema?.properties || {};
+            const requiredInputs = consumer.inputSchema?.required || [];
+            const missingFields = requiredInputs.filter((field) => !(field in outputProps));
+            if (missingFields.length > 0) {
+                warnings.push(`${producerName} → ${consumerName}: consumer requires [${missingFields.join(", ")}] but producer output lacks them`);
+            }
+        }
+        catch {
+            // skip unparseable phenotypes
+        }
+    }
+    return warnings;
+}
 //# sourceMappingURL=agent-create.js.map

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package/dist/commands/agent-run.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"agent-run.d.ts","sourceRoot":"","sources":["../../src/commands/agent-run.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AA2BpC,eAAO,MAAM,eAAe,SAqQxB,CAAC"}