@rotifer/playground 0.27.0 → 0.29.0

package/CHANGELOG.md

@@ -5,6 +5,54 @@ All notable changes to this project will be documented in this file.
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## [0.29.0](https://github.com/rotifer-protocol/rotifer-playground/compare/v0.28.0...v0.29.0) (2026-10-21)
+
+
+### ⚠ BREAKING CHANGES
+
+* **genome:** genomeId changes format from 64 hex characters to `bp1:` plus 64, and the same Blueprint now hashes to a different value (it covers the execution projection only). Readers are stricter: a Blueprint without `composition`, with missing required fields, or with a schema using any `$` keyword other than `$comment` is refused, and export refuses anything import would refuse.
+* **core:** TryCatch handlers get a spec GeneError naming the gene that ran ([#411](https://github.com/rotifer-protocol/rotifer-playground/issues/411))
+
+### Features
+
+* **genome:** RFC draft 5 B2-B5, and export refuses what import would refuse ([99973ca](https://github.com/rotifer-protocol/rotifer-playground/commit/99973ca7c892bd6eabc065d64def533051e9aa66))
+
+
+### Bug Fixes
+
+* **core:** compare Cond predicate numbers by mathematical value ([#413](https://github.com/rotifer-protocol/rotifer-playground/issues/413)) ([b014158](https://github.com/rotifer-protocol/rotifer-playground/commit/b01415887e45b5ddb47515d200c9f71d995d97df))
+* **core:** move the rotifer.net HTTP client to ureq 3 and drop the webpki-roots ignore ([#418](https://github.com/rotifer-protocol/rotifer-playground/issues/418)) ([705b3be](https://github.com/rotifer-protocol/rotifer-playground/commit/705b3be43cc68c2b98608ab5920b9b65779b96ba))
+* **core:** refuse request headers the HTTP client must manage in rotifer.net ([#419](https://github.com/rotifer-protocol/rotifer-playground/issues/419)) ([6c21e52](https://github.com/rotifer-protocol/rotifer-playground/commit/6c21e52f89b2b1ff461a796ecab6a3845e4bc1b0))
+* **core:** TryCatch handlers get a spec GeneError naming the gene that ran ([#411](https://github.com/rotifer-protocol/rotifer-playground/issues/411)) ([eeaf8d5](https://github.com/rotifer-protocol/rotifer-playground/commit/eeaf8d5dad5a4d140fbb2cca3bcd74633d1f3c51))
+* **deps:** bump rustls-webpki and webpki-roots for RUSTSEC-2026-0381/0382 ([#417](https://github.com/rotifer-protocol/rotifer-playground/issues/417)) ([5f9d865](https://github.com/rotifer-protocol/rotifer-playground/commit/5f9d86553e865e2f27449478b8aa9f8c0dc171eb))
+* **genome:** look up hints and capability queries by own role key only ([#415](https://github.com/rotifer-protocol/rotifer-playground/issues/415)) ([8bc3576](https://github.com/rotifer-protocol/rotifer-playground/commit/8bc35769c12785e6dc6f62f71e55bf11dd1c5041))
+* **genome:** red-team round 5 reader gaps N1-N4, and an e2e for a Try body out of fuel (F5) ([#414](https://github.com/rotifer-protocol/rotifer-playground/issues/414)) ([b18480a](https://github.com/rotifer-protocol/rotifer-playground/commit/b18480a9f469a1713053495a8d2f9a5ce419a4e9))
+* **genome:** refuse Cond forms, surrogates and duplicate keys import cannot honour ([#410](https://github.com/rotifer-protocol/rotifer-playground/issues/410)) ([a861da7](https://github.com/rotifer-protocol/rotifer-playground/commit/a861da702c723725ab217a3f53a2d5f664be3c62))
+* **genome:** refuse integers JSON.parse cannot hold exactly on import ([#408](https://github.com/rotifer-protocol/rotifer-playground/issues/408)) ([93f3e62](https://github.com/rotifer-protocol/rotifer-playground/commit/93f3e622017e26a017820a3567a13adcd516ef6e))
+* **genome:** refuse non-finite numbers and exempt only real, listed leaf IDs on import ([#406](https://github.com/rotifer-protocol/rotifer-playground/issues/406)) ([6e76aff](https://github.com/rotifer-protocol/rotifer-playground/commit/6e76aff6b38954b22b99d8a54457fd06f3606847))
+
+## [0.28.0](https://github.com/rotifer-protocol/rotifer-playground/compare/v0.27.0...v0.28.0) (2026-10-20)
+
+
+### Features
+
+* **genome:** add `rotifer genome export` with a credential scan gate ([#391](https://github.com/rotifer-protocol/rotifer-playground/issues/391)) ([fa1135a](https://github.com/rotifer-protocol/rotifer-playground/commit/fa1135abe2c649eaccdd0126fb59dd6d5c9f1ada))
+* **genome:** add `rotifer genome import` with evidence-based capability resolution ([#395](https://github.com/rotifer-protocol/rotifer-playground/issues/395)) ([bb893ca](https://github.com/rotifer-protocol/rotifer-playground/commit/bb893ca8410a72218abce142830fa05997670d22))
+* **install:** compare phenotype with the recorded content_hash, warning only ([#400](https://github.com/rotifer-protocol/rotifer-playground/issues/400)) ([0f0e8ff](https://github.com/rotifer-protocol/rotifer-playground/commit/0f0e8ff7fb6eb6c4343477b8710986bf0dc6d693))
+
+
+### Bug Fixes
+
+* **agent-run:** make Par / Cond / Try run on compiled genes ([#396](https://github.com/rotifer-protocol/rotifer-playground/issues/396)) ([f26d540](https://github.com/rotifer-protocol/rotifer-playground/commit/f26d5400b5c0deba7db1c484af7d31b4acc1bf14))
+* **deps:** bump wasmtime to 48.0.7 for the 2026-10-19 RustSec advisories ([#392](https://github.com/rotifer-protocol/rotifer-playground/issues/392)) ([a981083](https://github.com/rotifer-protocol/rotifer-playground/commit/a9810836ff0f8744be6173402bca516815ea968c))
+* **genome:** apply excludeGeneIds at admission, not after install ([#397](https://github.com/rotifer-protocol/rotifer-playground/issues/397)) ([ff41832](https://github.com/rotifer-protocol/rotifer-playground/commit/ff4183273f4b29fded555fc6a1c6c03342eb3289))
+* **genome:** close five gaps the Blueprint RFC review found ([#401](https://github.com/rotifer-protocol/rotifer-playground/issues/401)) ([f4bdc88](https://github.com/rotifer-protocol/rotifer-playground/commit/f4bdc8894d5d2f92d802548832317ecd1ffce4f1))
+* **genome:** stop the entropy rule from flagging natural-language text ([#404](https://github.com/rotifer-protocol/rotifer-playground/issues/404)) ([53ddc5d](https://github.com/rotifer-protocol/rotifer-playground/commit/53ddc5d6b62dfa12e24bc14e191b5e29b881decf))
+* **scanner:** pin scanner_version to the rules table and stop S-01 flagging literals ([#394](https://github.com/rotifer-protocol/rotifer-playground/issues/394)) ([9751938](https://github.com/rotifer-protocol/rotifer-playground/commit/9751938815f499542be27eff28aa87d86cbe9fff))
+* **supabase:** give the arena leaderboard a unique tiebreak so paging is stable ([#403](https://github.com/rotifer-protocol/rotifer-playground/issues/403)) ([eb6d62a](https://github.com/rotifer-protocol/rotifer-playground/commit/eb6d62acb586a050557ec0a414ebdbc666dc6215))
+* **supabase:** pin genes.created_at and decide duplicate hashes by who came first ([#399](https://github.com/rotifer-protocol/rotifer-playground/issues/399)) ([49fc4ea](https://github.com/rotifer-protocol/rotifer-playground/commit/49fc4eac8474aa8f0cbbbe6d440a5b1087dd4474))
+* **supabase:** stop recomputing content_hash server-side; pin content hash v1 ([#398](https://github.com/rotifer-protocol/rotifer-playground/issues/398)) ([d01a6d7](https://github.com/rotifer-protocol/rotifer-playground/commit/d01a6d7816ad789f65c12413157686d085a62c11))
+
 ## [0.27.0](https://github.com/rotifer-protocol/rotifer-playground/compare/v0.26.3...v0.27.0) (2026-10-19)
 
 

package/README.md

@@ -9,7 +9,7 @@
 
 Development environment for the **Rotifer Protocol** — **WASM-Native, Polyglot by Design**: build genes in TypeScript / Rust / AssemblyScript / Go / C, compete in Arenas, share via Cloud, and simulate agent evolution.
 
-> **Status:** v0.27.x — Every gene now has a content-derived ID: `v2:` plus a SHA-256 over its contract and its code, the same no matter who built it or when ([docs/gene-id-v2.md](docs/gene-id-v2.md)). The experimental P2P layer announces genes by that ID on a frozen protobuf wire format, validates every announcement before relaying it, and has no publisher field to forge — the publisher is the authenticated libp2p peer. Nodes on 0.26.x and earlier speak the old JSON format and do not see 0.27 nodes, so upgrade every machine in a P2P setup. Publishing still enforces spec §47.5 T1: a gene must handle one case correctly, refuse one malformed input through the `__rotifer_error` channel (reported as `INVALID_INPUT`), and keep 10 generated inputs schema-legal. See [CHANGELOG.md](CHANGELOG.md) for full release history. Automatic peer discovery, internet-wide reach, and L4 Collective Immunity are later milestones — see [Implementation Status](#implementation-status) below.
+> **Status:** v0.29.x — Genome Blueprints (`.rgenome`) now follow a fixed format 1. `rotifer genome export` scans an agent's genome for credentials and writes which genes it uses, how they are composed and a capability query per role; `rotifer genome import` rebuilds the agent from the Registry, refuses any file that does not match format 1, and export refuses to write a file that import's format checks would reject. A substitute gene is accepted only if its input and output schemas match exactly (descriptions, titles, examples and defaults aside); no Registry gene has reached the `verified` Arena tier yet, so today import installs the pinned genes, a gene that was never published cannot be imported, and Wrapped genes cannot be imported. Breaking changes: `genomeId` is now `bp1:` plus 64 hex characters and is not comparable with 0.28 values; a TryCatch handler now receives `{error: {geneId, errorCode, message, context}, original_input}`, so handlers reading `error.code` must be updated; a Blueprint's Cond accepts only the forms `agent run` executes (no `MATCHES`, `CONTAINS` only on strings, top-level fields only), and `agent run` now compares numbers by value in `EQ` / `NEQ` (`1` equals `1.0`); a gene's `rotifer.net` requests can no longer set client-managed headers such as `Host` or `Content-Length`. Every gene still has a content-derived `v2:` ID ([docs/gene-id-v2.md](docs/gene-id-v2.md)); the experimental P2P layer announces genes by that ID on a frozen protobuf wire format, and nodes on 0.26.x and earlier do not see newer nodes, so upgrade every machine in a P2P setup. Publishing still enforces spec §47.5 T1: a gene must handle one case correctly, refuse one malformed input through the `__rotifer_error` channel (reported as `INVALID_INPUT`), and keep 10 generated inputs schema-legal. See [CHANGELOG.md](CHANGELOG.md) for full release history. Automatic peer discovery, internet-wide reach, and L4 Collective Immunity are later milestones — see [Implementation Status](#implementation-status) below.
 
 ---
 
@@ -187,6 +187,8 @@ Run `rotifer --help` for the grouped command list. The commands below cover the
 | `rotifer agent create <agent-name>` | Create an Agent (`--composition Seq\|Par\|Cond\|Try\|TryPool`) |
 | `rotifer agent list` | List all agents |
 | `rotifer agent run <agent-name>` | Execute genome pipeline (WASM sandbox, `--no-sandbox` for Node.js) |
+| `rotifer genome export <agent>` | Export an agent's genome as a shareable Blueprint (`.rgenome`); aborts if the file would carry a credential or fail import's format checks |
+| `rotifer genome import <file>` | Rebuild an agent from a Blueprint: installs Native/Hybrid genes by exact version (`--pinned`) or picks Arena-verified substitutes that clear the F(g) and V(g) thresholds; `--dry-run` shows the plan |
 | `rotifer vg [path]` | V(g) security scan for gene/skill code |
 | `rotifer network` | P2P gene network commands (see `rotifer network --help`) |
 | `rotifer self-update` | Check for updates and upgrade Rotifer packages |

package/README.zh.md

@@ -9,7 +9,7 @@
 
 **Rotifer Protocol** 的开发环境——构建基因、运行 Arena 竞争、通过 Cloud 共享、模拟代理进化。
 
-> **状态：** v0.27.x——每个基因现在都有一个由内容算出来的身份号：`v2:` 加上对其契约与代码的 SHA-256，不管谁在什么时候构建，同一个基因得到同一个号（见 [docs/gene-id-v2.md](docs/gene-id-v2.md)）。实验性的 P2P 层用这个号发布基因公告，线格式已冻结为 protobuf；每条公告在转发前都先校验，消息里也没有可伪造的发布者字段——发布者就是经 libp2p 认证的那个节点。0.26.x 及更早版本的节点用的是旧的 JSON 格式，看不到 0.27 节点的公告，P2P 环境里的每台机器都要升级。发布基因仍强制执行规范 §47.5 T1：至少正确处理一条用例、通过 `__rotifer_error` 通道拒绝一条格式错误的输入（报告为 `INVALID_INPUT`），并让 10 组生成输入全部产出符合结构的输出。详细版本历史请参见 [CHANGELOG.md](CHANGELOG.md)。自动节点发现、跨公网连接与 L4 集体免疫是后续里程碑——详见下方[实现状态](#实现状态)。
+> **状态：** v0.29.x——Genome Blueprint（`.rgenome`）的格式已固定为 format 1。`rotifer genome export` 先扫描凭证，再写出 Agent 用了哪些基因、怎样组合、每个角色的能力查询；`rotifer genome import` 从 Registry 把 Agent 重建出来，不符合 format 1 的文件一律拒收，导入时格式检查通不过的文件，导出时也不会写出。替代基因只有在输入输出 schema 完全一致（描述、标题、示例和默认值除外）时才会采用；目前 Registry 里还没有基因进入 Arena 的 `verified` 档，所以现在导入时都会安装钉住的基因，作者从未发布过的基因无法导入，Wrapped 基因也不能导入。破坏性变更：`genomeId` 改为 `bp1:` 加 64 位十六进制，与 0.28 算出的值不能互相比较；TryCatch 的 handler 现在收到 `{error: {geneId, errorCode, message, context}, original_input}`，读取 `error.code` 的 handler 需要更新；Blueprint 里的 Cond 只接受 `agent run` 能执行的写法（不支持 `MATCHES`，`CONTAINS` 只比字符串，字段只认顶层）；`agent run` 的 `EQ`／`NEQ` 现在按数学值比较数字（`1` 等于 `1.0`）；基因的 `rotifer.net` 请求不能再自行设置 `Host`、`Content-Length` 等应由客户端管理的请求头。每个基因仍有一个由内容算出的 `v2:` 身份号（见 [docs/gene-id-v2.md](docs/gene-id-v2.md)）；实验性的 P2P 层用这个号在已冻结的 protobuf 线格式上发布基因公告，0.26.x 及更早版本的节点看不到新节点的公告，P2P 环境里的每台机器都要升级。发布基因仍强制执行规范 §47.5 T1：至少正确处理一条用例、通过 `__rotifer_error` 通道拒绝一条格式错误的输入（报告为 `INVALID_INPUT`），并让 10 组生成输入全部产出符合结构的输出。详细版本历史请参见 [CHANGELOG.md](CHANGELOG.md)。自动节点发现、跨公网连接与 L4 集体免疫是后续里程碑——详见下方[实现状态](#实现状态)。
 
 ---
 
@@ -185,6 +185,8 @@ playground/
 | `rotifer agent create <agent-name>` | 用基因组创建 Agent |
 | `rotifer agent list` | 列出全部 Agent |
 | `rotifer agent run <agent-name>` | 执行 Agent 的基因组管线 |
+| `rotifer genome export <agent>` | 把 Agent 的基因组导出为可分享的 Blueprint（`.rgenome`）；文件里若带凭证、或通不过导入的格式检查，则中止 |
+| `rotifer genome import <file>` | 从 Blueprint 重建 Agent：按精确版本安装 Native/Hybrid 基因（`--pinned`），或挑选 Arena 已验证、过 F(g) 与 V(g) 门槛的替代；`--dry-run` 只看解析结果 |
 | `rotifer vg [path]` | 对基因代码执行 V(g) 安全扫描 |
 | `rotifer network` | P2P 基因网络命令 |
 | `rotifer self-update` | 检查并升级 Rotifer 包 |

package/dist/cloud/capability-candidates.d.ts

@@ -0,0 +1,89 @@
+import { type LeaderboardRow } from "./client.js";
+import type { CloudGene } from "./types.js";
+import { type GeneIdV2Result } from "../utils/binding.js";
+export type RejectionCode = "not-verified" | "invalidated" | "fidelity" | "missing-evidence" | "fitness-below-threshold" | "vg-below-threshold" | "stale-evidence" | "no-artifact" | "schema-incompatible" | "excluded";
+export interface Rejection {
+    code: RejectionCode;
+    detail: string;
+}
+export interface CandidateEvidence {
+    tier: string;
+    fitness_value: number | null;
+    safety_score: number | null;
+    safety_score_source: "submitter-declared";
+    evaluation_method: string | null;
+    evaluation_n: number | null;
+    last_evaluated: string | null;
+    invalidation_reason: string | null;
+}
+export interface CandidateVerdict {
+    /** Registry row UUID — what `rotifer install` takes. */
+    cloudId: string;
+    owner: string;
+    name: string;
+    version: string;
+    fidelity: string;
+    /** v2 gene ID of the row's content, computed for every candidate that passed the other checks. */
+    geneId?: string;
+    evidence: CandidateEvidence;
+    admitted: boolean;
+    rejections: Rejection[];
+}
+export interface AdmissionPolicy {
+    minFitness: number;
+    minVg: number;
+    maxEvalAgeDays: number;
+    now: Date;
+}
+export interface CapabilityQueryLike {
+    domain: string;
+    inputSchemaCompat: unknown;
+    outputSchemaCompat: unknown;
+    minFitness?: number;
+    excludeGeneIds?: string[];
+}
+export interface CandidateResolution {
+    /** Every candidate considered, admitted or not, best first among the admitted. */
+    candidates: CandidateVerdict[];
+    /** Admitted candidates ordered by fitness_value, highest first. */
+    admitted: CandidateVerdict[];
+}
+/** Evidence could not be obtained — a failure, never a reason to fall back silently. */
+export declare class EvidenceError extends Error {
+    constructor(message: string);
+}
+export interface CandidateSources {
+    arenaLeaderboard: (o: {
+        domain?: string;
+        limit?: number;
+        offset?: number;
+    }) => Promise<LeaderboardRow[]>;
+    getGene: (id: string) => Promise<CloudGene>;
+    /** v2 gene ID of a Registry row's content — needed to apply excludeGeneIds before choosing. */
+    computeGeneId: (gene: CloudGene) => Promise<GeneIdV2Result>;
+}
+/**
+ * Compute a candidate's v2 gene ID from its Registry row without installing it:
+ * phenotype and WASM go to a throwaway directory, the WASM is checked against
+ * the row's size and SHA-256, and nothing is counted as a download.
+ */
+export declare function computeGeneIdFromRegistry(gene: CloudGene): Promise<GeneIdV2Result>;
+/** RFC §4.5 normalise. A schema that is not an object is returned as it is. */
+export declare function normaliseSchema(schema: unknown): unknown;
+export declare function schemaIncompatibility(query: {
+    inputSchemaCompat: unknown;
+    outputSchemaCompat: unknown;
+}, candidate: {
+    inputSchema?: unknown;
+    outputSchema?: unknown;
+}): string | null;
+/** Every condition a candidate fails; empty means admitted. */
+export declare function admissionRejections(row: LeaderboardRow, gene: CloudGene, query: CapabilityQueryLike, policy: AdmissionPolicy): Rejection[];
+/**
+ * Fetch the evidence for every leaderboard row in `query.domain` and judge each
+ * one. Fails (EvidenceError) when evidence cannot be read — an unreachable
+ * leaderboard or a candidate whose Registry row has an empty phenotype is not
+ * "no candidate", it is "could not decide".
+ */
+export declare function resolveCapabilityCandidates(query: CapabilityQueryLike, policy: AdmissionPolicy, sources?: CandidateSources): Promise<CandidateResolution>;
+//# sourceMappingURL=capability-candidates.d.ts.map

package/dist/cloud/capability-candidates.d.ts.map

@@ -0,0 +1 @@
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package/dist/cloud/capability-candidates.js

@@ -0,0 +1,296 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.EvidenceError = void 0;
+exports.computeGeneIdFromRegistry = computeGeneIdFromRegistry;
+exports.normaliseSchema = normaliseSchema;
+exports.schemaIncompatibility = schemaIncompatibility;
+exports.admissionRejections = admissionRejections;
+exports.resolveCapabilityCandidates = resolveCapabilityCandidates;
+/**
+ * Capability-mode candidate resolution for `rotifer genome import`.
+ *
+ * Evidence comes only from existing read-only endpoints:
+ *   - scores: `get_arena_leaderboard` (one row per logical gene; `gene_id` is
+ *     the Registry row UUID of the version on the board);
+ *   - full phenotype + artifact: `getGene(<UUID>)`. `listGenes()` and
+ *     `getGene().fitness` are not used — the search RPC blanks phenotype and
+ *     fitness, so they cannot support a selection.
+ *
+ * A candidate is admitted only when every condition holds, and missing
+ * evidence counts as failing (§5.1: F(g) and V(g) must both clear their
+ * thresholds). Nothing here is relaxed to make a candidate pass.
+ *
+ * `safety_score` is the value the Arena submitter reported with its run; the
+ * server does not recompute it. It is used as a declared safety score and
+ * labelled that way in every output — it is not the `rotifer vg` grade and not
+ * the full §5.1 V(g).
+ */
+const node_crypto_1 = require("node:crypto");
+const node_fs_1 = require("node:fs");
+const node_os_1 = require("node:os");
+const node_path_1 = require("node:path");
+const client_js_1 = require("./client.js");
+const binding_js_1 = require("../utils/binding.js");
+const validate_gene_name_js_1 = require("../utils/validate-gene-name.js");
+const genome_format_js_1 = require("../commands/genome-format.js");
+/** Evidence could not be obtained — a failure, never a reason to fall back silently. */
+class EvidenceError extends Error {
+    constructor(message) {
+        super(message);
+        this.name = "EvidenceError";
+    }
+}
+exports.EvidenceError = EvidenceError;
+const LEADERBOARD_PAGE = 200;
+/** 10 000 rows per domain is far beyond today's board; past it the read is treated as unreliable. */
+const LEADERBOARD_MAX_PAGES = 50;
+/**
+ * Compute a candidate's v2 gene ID from its Registry row without installing it:
+ * phenotype and WASM go to a throwaway directory, the WASM is checked against
+ * the row's size and SHA-256, and nothing is counted as a download.
+ */
+async function computeGeneIdFromRegistry(gene) {
+    if (!gene.wasm_url)
+        return { reason: "the Registry row has no WASM artifact" };
+    (0, validate_gene_name_js_1.validateGeneName)(gene.name);
+    const root = (0, node_fs_1.mkdtempSync)((0, node_path_1.join)((0, node_os_1.tmpdir)(), "rotifer-candidate-"));
+    try {
+        const dir = (0, node_path_1.join)(root, gene.name);
+        (0, node_fs_1.mkdirSync)(dir);
+        (0, node_fs_1.writeFileSync)((0, node_path_1.join)(dir, "phenotype.json"), JSON.stringify(gene.phenotype, null, 2) + "\n");
+        const wasm = await (0, client_js_1.downloadGeneWasm)(gene.wasm_url);
+        if (gene.wasm_size && wasm.length !== gene.wasm_size)
+            return { reason: "WASM size does not match the Registry row" };
+        if (gene.wasm_hash && (0, node_crypto_1.createHash)("sha256").update(wasm).digest("hex") !== gene.wasm_hash) {
+            return { reason: "WASM hash does not match the Registry row" };
+        }
+        (0, node_fs_1.writeFileSync)((0, node_path_1.join)(dir, "gene.ir.wasm"), wasm);
+        return (0, binding_js_1.geneIdV2)(root, gene.name);
+    }
+    finally {
+        (0, node_fs_1.rmSync)(root, { recursive: true, force: true });
+    }
+}
+const DEFAULT_SOURCES = { arenaLeaderboard: client_js_1.arenaLeaderboard, getGene: client_js_1.getGene, computeGeneId: computeGeneIdFromRegistry };
+// ── Schema compatibility (RFC §4.5, decision B2) ─────────────
+//
+// A substitute is compatible only if its schemas equal the query's exactly
+// after normalisation: JCS(normalise(query)) = JCS(normalise(candidate)), for
+// input and output. normalise deletes the annotation keywords and nothing else,
+// and descends only into keywords whose value is itself a schema. Every other
+// member is compared verbatim. A schema without a `properties` object, or a
+// member whose name starts with `$` (other than `$comment`) anywhere in either
+// schema, makes the pair incompatible: $ref, $dynamicRef, $recursiveRef, $id,
+// $anchor, $schema and the like depend on base URIs and resources the Blueprint
+// does not fix ($defs is refused with them, since nothing can reference it).
+const ANNOTATIONS = new Set(["description", "title", "examples", "default", "$comment"]);
+/** Keywords whose member values are schemas (member names are kept). */
+const SCHEMA_MAPS = new Set(["properties", "patternProperties", "$defs"]);
+/** Keywords whose value is a schema. */
+const SCHEMA_VALUES = new Set(["items", "additionalProperties", "not", "if", "then", "else", "contains"]);
+/** Keywords whose elements are schemas. */
+const SCHEMA_ARRAYS = new Set(["prefixItems", "allOf", "anyOf", "oneOf"]);
+function isPlainObject(v) {
+    return typeof v === "object" && v !== null && !Array.isArray(v);
+}
+/** RFC §4.5 normalise. A schema that is not an object is returned as it is. */
+function normaliseSchema(schema) {
+    if (!isPlainObject(schema))
+        return schema;
+    const entries = [];
+    for (const [key, value] of Object.entries(schema)) {
+        if (ANNOTATIONS.has(key))
+            continue;
+        if (SCHEMA_MAPS.has(key) && isPlainObject(value)) {
+            entries.push([key, Object.fromEntries(Object.entries(value).map(([name, sub]) => [name, normaliseSchema(sub)]))]);
+        }
+        else if (SCHEMA_VALUES.has(key)) {
+            entries.push([key, normaliseSchema(value)]);
+        }
+        else if (SCHEMA_ARRAYS.has(key) && Array.isArray(value)) {
+            entries.push([key, value.map(normaliseSchema)]);
+        }
+        else {
+            entries.push([key, value]);
+        }
+    }
+    // fromEntries, not assignment: a member called "__proto__" stays a member.
+    return Object.fromEntries(entries);
+}
+/** True if any member, at any depth, is named with a leading `$` other than `$comment`. */
+function hasDollarKeyword(node) {
+    if (Array.isArray(node))
+        return node.some(hasDollarKeyword);
+    if (!isPlainObject(node))
+        return false;
+    return Object.entries(node).some(([key, value]) => (key.startsWith("$") && key !== "$comment") || hasDollarKeyword(value));
+}
+function hasProperties(s) {
+    return isPlainObject(s) && isPlainObject(s.properties);
+}
+/** JCS of the normalised schema, or null when canonical JSON has no form for it. */
+function canonicalSchema(s) {
+    try {
+        return (0, genome_format_js_1.jcs)(normaliseSchema(s));
+    }
+    catch {
+        return null;
+    }
+}
+function schemaIncompatibility(query, candidate) {
+    const pairs = [
+        ["input", query.inputSchemaCompat, candidate.inputSchema],
+        ["output", query.outputSchemaCompat, candidate.outputSchema],
+    ];
+    for (const [side, q, c] of pairs) {
+        if (!hasProperties(q))
+            return `the Blueprint's ${side} schema has no checkable properties`;
+        if (!hasProperties(c))
+            return `the candidate declares no checkable ${side} schema`;
+        if (hasDollarKeyword(q) || hasDollarKeyword(c)) {
+            return `the ${side} schemas use a $-keyword other than $comment ($ref, $id, $schema, ...), which cannot be compared`;
+        }
+        const qc = canonicalSchema(q);
+        const cc = canonicalSchema(c);
+        if (qc === null || cc === null)
+            return `the ${side} schemas hold a value canonical JSON cannot represent`;
+        if (qc !== cc)
+            return `${side} schema differs from the original's (annotations aside)`;
+    }
+    return null;
+}
+// ── Admission ────────────────────────────────────────────────
+const DAY_MS = 24 * 60 * 60 * 1000;
+/** Every condition a candidate fails; empty means admitted. */
+function admissionRejections(row, gene, query, policy) {
+    const out = [];
+    if (row.tier !== "verified") {
+        out.push({ code: "not-verified", detail: `Arena tier is '${row.tier}', not 'verified'` });
+    }
+    if (row.invalidation_reason) {
+        out.push({ code: "invalidated", detail: `Arena entry invalidated: ${row.invalidation_reason}` });
+    }
+    const fidelity = (row.fidelity || gene.fidelity || "").toLowerCase();
+    if (fidelity !== "native" && fidelity !== "hybrid") {
+        out.push({ code: "fidelity", detail: `fidelity '${row.fidelity || gene.fidelity}' is not Native or Hybrid` });
+    }
+    if (row.fitness_value === null || row.fitness_value === undefined) {
+        out.push({ code: "missing-evidence", detail: "no fitness_value" });
+    }
+    else if (!(row.fitness_value > policy.minFitness)) {
+        out.push({ code: "fitness-below-threshold", detail: `fitness ${row.fitness_value} ≤ minFitness ${policy.minFitness}` });
+    }
+    if (row.safety_score === null || row.safety_score === undefined) {
+        out.push({ code: "missing-evidence", detail: "no safety_score" });
+    }
+    else if (!(row.safety_score > policy.minVg)) {
+        out.push({
+            code: "vg-below-threshold",
+            detail: `submitter-declared safety ${row.safety_score} ≤ V(g) threshold ${policy.minVg}`,
+        });
+    }
+    if (!row.last_evaluated) {
+        out.push({ code: "missing-evidence", detail: "no last_evaluated" });
+    }
+    else {
+        const ageDays = (policy.now.getTime() - Date.parse(row.last_evaluated)) / DAY_MS;
+        if (!Number.isFinite(ageDays) || ageDays > policy.maxEvalAgeDays) {
+            out.push({
+                code: "stale-evidence",
+                detail: `last evaluated ${row.last_evaluated}, older than ${policy.maxEvalAgeDays} days`,
+            });
+        }
+    }
+    // Installing it must give something executable whose v2 ID can be checked.
+    if (!gene.wasm_url)
+        out.push({ code: "no-artifact", detail: "the Registry row has no WASM artifact" });
+    const schemaProblem = schemaIncompatibility(query, gene.phenotype ?? {});
+    if (schemaProblem)
+        out.push({ code: "schema-incompatible", detail: schemaProblem });
+    return out;
+}
+/**
+ * Fetch the evidence for every leaderboard row in `query.domain` and judge each
+ * one. Fails (EvidenceError) when evidence cannot be read — an unreachable
+ * leaderboard or a candidate whose Registry row has an empty phenotype is not
+ * "no candidate", it is "could not decide".
+ */
+async function resolveCapabilityCandidates(query, policy, sources = DEFAULT_SOURCES) {
+    // The RPC returns at most `limit` rows per call; read every page, or a
+    // qualifying candidate past the first page would be reported as "none".
+    const rows = [];
+    for (let page = 0;; page++) {
+        if (page >= LEADERBOARD_MAX_PAGES) {
+            throw new EvidenceError(`the Arena leaderboard for '${query.domain}' has more than ${LEADERBOARD_PAGE * LEADERBOARD_MAX_PAGES} rows; refusing to decide on a partial read`);
+        }
+        let batch;
+        try {
+            batch = await sources.arenaLeaderboard({ domain: query.domain, limit: LEADERBOARD_PAGE, offset: page * LEADERBOARD_PAGE });
+        }
+        catch (err) {
+            throw new EvidenceError(`could not read the Arena leaderboard for '${query.domain}': ${err.message}`);
+        }
+        if (!Array.isArray(batch))
+            throw new EvidenceError(`the Arena leaderboard for '${query.domain}' returned no rows array`);
+        rows.push(...batch);
+        if (batch.length < LEADERBOARD_PAGE)
+            break;
+    }
+    const candidates = [];
+    for (const row of rows.filter((r) => r.domain === query.domain)) {
+        let gene;
+        try {
+            gene = await sources.getGene(row.gene_id);
+        }
+        catch (err) {
+            throw new EvidenceError(`could not read Registry row ${row.gene_id} (${row.gene_name}): ${err.message}`);
+        }
+        if (!gene.phenotype || Object.keys(gene.phenotype).length === 0) {
+            throw new EvidenceError(`Registry row ${row.gene_id} (${row.gene_name}) returned an empty phenotype`);
+        }
+        const rejections = admissionRejections(row, gene, query, policy);
+        // Every candidate that passed everything else is identified by content
+        // before it can be chosen: the import later checks that what it installed
+        // is this exact content, and excludeGeneIds (v2 IDs) can be applied here,
+        // so an excluded candidate is rejected and the next one gets its turn.
+        let geneId;
+        const excluded = query.excludeGeneIds ?? [];
+        if (rejections.length === 0) {
+            const id = await sources.computeGeneId(gene);
+            if ("id" in id) {
+                geneId = id.id;
+                if (excluded.includes(id.id)) {
+                    rejections.push({ code: "excluded", detail: `v2 gene ID ${id.id} is in the Blueprint's excludeGeneIds` });
+                }
+            }
+            else {
+                rejections.push({ code: "missing-evidence", detail: `v2 gene ID could not be computed from the Registry row: ${id.reason}` });
+            }
+        }
+        candidates.push({
+            cloudId: row.gene_id,
+            owner: row.owner_username,
+            name: row.gene_name,
+            version: row.gene_version,
+            fidelity: row.fidelity,
+            ...(geneId ? { geneId } : {}),
+            evidence: {
+                tier: row.tier,
+                fitness_value: row.fitness_value,
+                safety_score: row.safety_score,
+                safety_score_source: "submitter-declared",
+                evaluation_method: row.evaluation_method,
+                evaluation_n: row.evaluation_n,
+                last_evaluated: row.last_evaluated,
+                invalidation_reason: row.invalidation_reason,
+            },
+            admitted: rejections.length === 0,
+            rejections,
+        });
+    }
+    const admitted = candidates
+        .filter((c) => c.admitted)
+        .sort((a, b) => (b.evidence.fitness_value ?? 0) - (a.evidence.fitness_value ?? 0));
+    return { candidates, admitted };
+}
+//# sourceMappingURL=capability-candidates.js.map

package/dist/cloud/capability-candidates.js.map

@@ -0,0 +1 @@
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package/dist/commands/agent-create.d.ts

@@ -7,6 +7,14 @@ export interface CreateAgentParams {
     compositionType: string;
     parMerge?: string;
     strategy?: string;
+    /** Cond predicate to store; omitted → the default `{ field: "type", equals: "primary" }`. */
+    predicate?: {
+        field: string;
+        op?: string;
+        value?: unknown;
+    };
+    /** Receives schema-compatibility warnings instead of printing them (for --json callers). */
+    onSchemaWarnings?: (warnings: string[]) => void;
 }
 export interface AgentRecord {
     id: string;

package/dist/commands/agent-create.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"agent-create.d.ts","sourceRoot":"","sources":["../../src/commands/agent-create.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAkBpC,MAAM,WAAW,iBAAiB;IAChC,IAAI,EAAE,MAAM,CAAC;IACb,QAAQ,EAAE,MAAM,CAAC;IACjB,SAAS,EAAE,MAAM,CAAC;IAClB,MAAM,EAAE,MAAM,EAAE,CAAC;IACjB,eAAe,EAAE,MAAM,CAAC;IACxB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,6FAA6F;IAC7F,SAAS,CAAC,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,EAAE,CAAC,EAAE,MAAM,CAAC;QAAC,KAAK,CAAC,EAAE,OAAO,CAAA;KAAE,CAAC;IAC5D,4FAA4F;IAC5F,gBAAgB,CAAC,EAAE,CAAC,QAAQ,EAAE,MAAM,EAAE,KAAK,IAAI,CAAC;CACjD;AAED,MAAM,WAAW,WAAW;IAC1B,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,EAAE,CAAC;IACjB,WAAW,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;IACrC,QAAQ,EAAE,MAAM,CAAC;IACjB,SAAS,EAAE,MAAM,CAAC;IAClB,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,wBAAgB,eAAe,CAAC,MAAM,EAAE,iBAAiB,GAAG,WAAW,CA8DtE;AAED,eAAO,MAAM,kBAAkB,SAiG5B,CAAC"}

package/dist/commands/agent-create.js

@@ -57,7 +57,10 @@ function createAgentCore(params) {
     }
     if (genome.length >= 2) {
         const warnings = checkSchemaCompatibility(root, params.genesDir, genome);
-        if (warnings.length > 0) {
+        if (params.onSchemaWarnings) {
+            params.onSchemaWarnings(warnings);
+        }
+        else if (warnings.length > 0) {
             display.warn("Schema compatibility warnings:");
             for (const w of warnings) {
                 display.warn(`  ${w}`);
@@ -73,7 +76,7 @@ function createAgentCore(params) {
     else if (compositionType === "Cond" && genome.length >= 2) {
         composition = {
             type: "Cond",
-            predicate: { field: "type", equals: "primary" },
+            predicate: params.predicate ?? { field: "type", equals: "primary" },
             thenBranch: genome[0],
             elseBranch: genome[1],
         };

package/dist/commands/agent-create.js.map

@@ -1 +1 @@
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package/dist/commands/agent-run.d.ts.map

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