npm - @rotifer/mcp-server - Versions diffs - 0.7.0 → 0.7.5 - Mend

@rotifer/mcp-server 0.7.0 → 0.7.5

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (9) hide show

package/dist/cloud.d.ts CHANGED Viewed

@@ -14,6 +14,8 @@ export interface Gene {
     wasm_size: number;
     downloads: number;
     reputation_score: number | null;
+    previous_version_id: string | null;
+    changelog: string | null;
     created_at: string;
     updated_at: string;
     phenotype?: Record<string, unknown>;
@@ -91,6 +93,14 @@ export interface DeveloperProfile {
     } | null;
 }
 export declare function getDeveloperProfile(username: string): Promise<DeveloperProfile>;
+export interface GeneVersionEntry {
+    id: string;
+    version: string;
+    changelog: string | null;
+    previous_version_id: string | null;
+    created_at: string;
+}
+export declare function listGeneVersions(ownerName: string, geneName: string): Promise<GeneVersionEntry[]>;
 export interface ArenaSubmitResult {
     gene_id: string;
     domain: string;
@@ -107,6 +117,28 @@ export declare function arenaSubmitCloud(geneId: string, fitness: {
     latency_score: number;
     resource_efficiency: number;
 }): Promise<ArenaSubmitResult>;
+export declare function logMcpCall(entry: {
+    tool_name: string;
+    gene_id?: string | null;
+    success: boolean;
+    latency_ms: number;
+    caller?: string | null;
+}): void;
+export interface McpStatsResult {
+    period: string;
+    total_calls: number;
+    success_rate: number;
+    avg_latency_ms: number;
+    top_tools: Array<{
+        tool_name: string;
+        count: number;
+    }>;
+    top_genes: Array<{
+        gene_id: string;
+        count: number;
+    }>;
+}
+export declare function getMcpStats(days?: number): Promise<McpStatsResult>;
 export interface InstallResult {
     gene_id: string;
     name: string;

package/dist/cloud.js CHANGED Viewed

@@ -1,5 +1,6 @@
 import { readFileSync, existsSync } from "node:fs";
 import { join } from "node:path";
+import { loadCredentials } from "./auth.js";
 const ROTIFER_HOME = join(process.env.HOME || process.env.USERPROFILE || "/tmp", ".rotifer");
 const DEFAULT_ANON_KEY = "eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.eyJpc3MiOiJzdXBhYmFzZSIsInJlZiI6InZpaGJtcHVxbGFtaHhibWFoY2plIiwicm9sZSI6ImFub24iLCJpYXQiOjE3NzE4MjUxMTQsImV4cCI6MjA4NzQwMTExNH0.t77n7TZ2jV04lya2sWuv4AYAcXnsc49jcfVIJr0heYQ";
 let _cachedConfig = null;
@@ -42,7 +43,6 @@ function headers() {
     };
 }
 function authHeaders() {
-    const { loadCredentials } = require("./auth.js");
     const creds = loadCredentials();
     const h = headers();
     if (creds) {
@@ -51,7 +51,6 @@ function authHeaders() {
     return h;
 }
 function requireAuthHeaders() {
-    const { loadCredentials } = require("./auth.js");
     const creds = loadCredentials();
     if (!creds) {
         throw new Error("Authentication required. Run 'rotifer login' in terminal first.");
@@ -107,6 +106,8 @@ export async function listGenes(options) {
         wasm_size: row.wasm_size || 0,
         downloads: row.downloads || 0,
         reputation_score: row.reputation_score ?? null,
+        previous_version_id: row.previous_version_id ?? null,
+        changelog: row.changelog ?? null,
         created_at: row.created_at,
         updated_at: row.updated_at,
     }));
@@ -133,6 +134,8 @@ export async function getGene(id) {
         wasm_size: row.wasm_size || 0,
         downloads: row.downloads || 0,
         reputation_score: row.reputation_score ?? null,
+        previous_version_id: row.previous_version_id ?? null,
+        changelog: row.changelog ?? null,
         created_at: row.created_at,
         updated_at: row.updated_at,
     };
@@ -221,6 +224,24 @@ export async function getDeveloperProfile(username) {
             : null,
     };
 }
+export async function listGeneVersions(ownerName, geneName) {
+    const params = new URLSearchParams();
+    params.set("name", `eq.${geneName}`);
+    params.set("published", "eq.true");
+    params.set("select", "id,version,changelog,previous_version_id,created_at,profiles(username)");
+    params.set("order", "created_at.asc");
+    const res = await fetch(apiUrl(`/genes?${params}`), { headers: headers() });
+    const data = await handleResponse(res);
+    return data
+        .filter((row) => (row.profiles?.username || "").toLowerCase() === ownerName.toLowerCase())
+        .map((row) => ({
+        id: row.id,
+        version: row.version,
+        changelog: row.changelog ?? null,
+        previous_version_id: row.previous_version_id ?? null,
+        created_at: row.created_at,
+    }));
+}
 export async function arenaSubmitCloud(geneId, fitness) {
     const gene = await getGene(geneId);
     const body = {
@@ -254,6 +275,61 @@ export async function arenaSubmitCloud(geneId, fitness) {
         resource_efficiency: row.resource_efficiency,
     };
 }
+// ── MCP Call Logging (fire-and-forget) ──
+export function logMcpCall(entry) {
+    const body = {
+        tool_name: entry.tool_name,
+        gene_id: entry.gene_id || null,
+        success: entry.success,
+        latency_ms: entry.latency_ms,
+        caller: entry.caller || null,
+    };
+    fetch(apiUrl("/mcp_call_log"), {
+        method: "POST",
+        headers: { ...headers(), Prefer: "return=minimal" },
+        body: JSON.stringify(body),
+    }).catch(() => { });
+}
+export async function getMcpStats(days = 7) {
+    const since = new Date(Date.now() - days * 86400000).toISOString();
+    const params = new URLSearchParams();
+    params.set("created_at", `gte.${since}`);
+    params.set("select", "tool_name,gene_id,success,latency_ms");
+    params.set("limit", "10000");
+    const res = await fetch(apiUrl(`/mcp_call_log?${params}`), {
+        headers: requireAuthHeaders(),
+    });
+    const data = await handleResponse(res);
+    const totalCalls = data.length;
+    const successCount = data.filter((r) => r.success).length;
+    const avgLatency = totalCalls > 0
+        ? Math.round(data.reduce((s, r) => s + r.latency_ms, 0) / totalCalls)
+        : 0;
+    const toolCounts = new Map();
+    const geneCounts = new Map();
+    for (const row of data) {
+        toolCounts.set(row.tool_name, (toolCounts.get(row.tool_name) || 0) + 1);
+        if (row.gene_id) {
+            geneCounts.set(row.gene_id, (geneCounts.get(row.gene_id) || 0) + 1);
+        }
+    }
+    const topTools = [...toolCounts.entries()]
+        .sort((a, b) => b[1] - a[1])
+        .slice(0, 10)
+        .map(([tool_name, count]) => ({ tool_name, count }));
+    const topGenes = [...geneCounts.entries()]
+        .sort((a, b) => b[1] - a[1])
+        .slice(0, 10)
+        .map(([gene_id, count]) => ({ gene_id, count }));
+    return {
+        period: `${days}d`,
+        total_calls: totalCalls,
+        success_rate: totalCalls > 0 ? +(successCount / totalCalls).toFixed(4) : 0,
+        avg_latency_ms: avgLatency,
+        top_tools: topTools,
+        top_genes: topGenes,
+    };
+}
 export async function installGene(geneId, projectRoot) {
     const { writeFileSync, mkdirSync } = require("node:fs");
     const { join } = require("node:path");

package/dist/cloud.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/server.js CHANGED Viewed

@@ -1,9 +1,9 @@
 import { Server } from "@modelcontextprotocol/sdk/server/index.js";
 import { CallToolRequestSchema, ListToolsRequestSchema, ListResourceTemplatesRequestSchema, ReadResourceRequestSchema, } from "@modelcontextprotocol/sdk/types.js";
-import { searchGenes, getGeneDetail, arenaRankings, compareGenes, geneStats, leaderboard, developerProfile, listLocalGenes, listLocalAgents, submitToArena, installGeneFromCloud, createLocalAgent, agentRun, compileGene, runGene, initGene, scanGenes, wrapGene, testGene, publishGene } from "./tools.js";
-import { getGeneStatsRpc, getReputationLeaderboard, getDeveloperProfile, getGene } from "./cloud.js";
+import { searchGenes, getGeneDetail, arenaRankings, compareGenes, geneStats, leaderboard, developerProfile, listLocalGenes, listLocalAgents, submitToArena, installGeneFromCloud, createLocalAgent, agentRun, compileGene, runGene, initGene, scanGenes, wrapGene, testGene, publishGene, authStatus, login, logout, geneVersions, mcpStats } from "./tools.js";
+import { getGeneStatsRpc, getReputationLeaderboard, getDeveloperProfile, getGene, logMcpCall } from "./cloud.js";
 export function createServer() {
-    const server = new Server({ name: "rotifer", version: "0.7.0" }, { capabilities: { tools: {}, resources: {} } });
+    const server = new Server({ name: "rotifer", version: "0.7.5" }, { capabilities: { tools: {}, resources: {} } });
     server.setRequestHandler(ListToolsRequestSchema, async () => ({
         tools: [
             {
@@ -245,7 +245,7 @@ export function createServer() {
             },
             {
                 name: "publish_gene",
-                description: "Publish a Gene to Rotifer Cloud. Requires authentication (rotifer login). Validates, uploads, and optionally submits to Arena. Use --all to publish all local genes.",
+                description: "Publish a Gene to Rotifer Cloud. Requires authentication (use login tool first). Validates, uploads, and optionally submits to Arena. Use --all to publish all local genes.",
                 inputSchema: {
                     type: "object",
                     properties: {
@@ -256,57 +256,165 @@ export function createServer() {
                     },
                 },
             },
+            {
+                name: "list_gene_versions",
+                description: "List the version history chain of a Gene by owner and name. Returns all published versions in chronological order with changelog entries and previous_version_id links.",
+                inputSchema: {
+                    type: "object",
+                    properties: {
+                        owner: { type: "string", description: "Gene owner's username" },
+                        name: { type: "string", description: "Gene name" },
+                    },
+                    required: ["owner", "name"],
+                },
+            },
+            {
+                name: "get_mcp_stats",
+                description: "Get MCP Server call analytics for a given time period. Returns total calls, success rate, average latency, top tools, and top genes. Requires authentication.",
+                inputSchema: {
+                    type: "object",
+                    properties: {
+                        days: { type: "number", description: "Time window in days (default 7)" },
+                    },
+                },
+            },
+            {
+                name: "auth_status",
+                description: "Check current authentication status. Returns whether the user is logged in, their username, provider, and how many minutes until the token expires.",
+                inputSchema: {
+                    type: "object",
+                    properties: {},
+                },
+            },
+            {
+                name: "login",
+                description: "Log in to Rotifer Cloud. Opens the browser for OAuth authorization (GitHub or GitLab). After the user authorizes in the browser, credentials are saved locally. This must be done before using arena_submit or publish_gene.",
+                inputSchema: {
+                    type: "object",
+                    properties: {
+                        provider: { type: "string", enum: ["github", "gitlab"], description: "OAuth provider (default: gitlab)" },
+                    },
+                },
+            },
+            {
+                name: "logout",
+                description: "Log out from Rotifer Cloud. Clears locally saved credentials.",
+                inputSchema: {
+                    type: "object",
+                    properties: {},
+                },
+            },
         ],
     }));
+    const GENE_ID_TOOLS = new Set([
+        "get_gene_detail", "get_gene_stats", "install_gene",
+        "arena_submit", "compare_genes", "run_gene", "compile_gene",
+    ]);
+    function extractGeneId(toolName, args) {
+        if (!GENE_ID_TOOLS.has(toolName))
+            return null;
+        return (args.gene_id || args.id || args.gene_name || null);
+    }
     server.setRequestHandler(CallToolRequestSchema, async (request) => {
         const { name, arguments: args } = request.params;
+        const startMs = Date.now();
         try {
+            let result;
             switch (name) {
                 case "search_genes":
-                    return { content: [{ type: "text", text: JSON.stringify(await searchGenes(args), null, 2) }] };
+                    result = await searchGenes(args);
+                    break;
                 case "get_gene_detail":
-                    return { content: [{ type: "text", text: JSON.stringify(await getGeneDetail(args), null, 2) }] };
+                    result = await getGeneDetail(args);
+                    break;
                 case "get_arena_rankings":
-                    return { content: [{ type: "text", text: JSON.stringify(await arenaRankings(args), null, 2) }] };
+                    result = await arenaRankings(args);
+                    break;
                 case "compare_genes":
-                    return { content: [{ type: "text", text: JSON.stringify(await compareGenes(args), null, 2) }] };
+                    result = await compareGenes(args);
+                    break;
                 case "get_gene_stats":
-                    return { content: [{ type: "text", text: JSON.stringify(await geneStats(args), null, 2) }] };
+                    result = await geneStats(args);
+                    break;
                 case "get_leaderboard":
-                    return { content: [{ type: "text", text: JSON.stringify(await leaderboard(args), null, 2) }] };
+                    result = await leaderboard(args);
+                    break;
                 case "get_developer_profile":
-                    return { content: [{ type: "text", text: JSON.stringify(await developerProfile(args), null, 2) }] };
+                    result = await developerProfile(args);
+                    break;
                 case "list_local_genes":
-                    return { content: [{ type: "text", text: JSON.stringify(listLocalGenes(args), null, 2) }] };
+                    result = listLocalGenes(args);
+                    break;
                 case "list_local_agents":
-                    return { content: [{ type: "text", text: JSON.stringify(listLocalAgents(args), null, 2) }] };
+                    result = listLocalAgents(args);
+                    break;
                 case "install_gene":
-                    return { content: [{ type: "text", text: JSON.stringify(await installGeneFromCloud(args), null, 2) }] };
+                    result = await installGeneFromCloud(args);
+                    break;
                 case "arena_submit":
-                    return { content: [{ type: "text", text: JSON.stringify(await submitToArena(args), null, 2) }] };
+                    result = await submitToArena(args);
+                    break;
                 case "create_agent":
-                    return { content: [{ type: "text", text: JSON.stringify(createLocalAgent(args), null, 2) }] };
+                    result = createLocalAgent(args);
+                    break;
                 case "agent_run":
-                    return { content: [{ type: "text", text: JSON.stringify(agentRun(args), null, 2) }] };
+                    result = agentRun(args);
+                    break;
                 case "compile_gene":
-                    return { content: [{ type: "text", text: JSON.stringify(compileGene(args), null, 2) }] };
+                    result = compileGene(args);
+                    break;
                 case "run_gene":
-                    return { content: [{ type: "text", text: JSON.stringify(runGene(args), null, 2) }] };
+                    result = runGene(args);
+                    break;
                 case "init_gene":
-                    return { content: [{ type: "text", text: JSON.stringify(initGene(args), null, 2) }] };
+                    result = initGene(args);
+                    break;
                 case "scan_genes":
-                    return { content: [{ type: "text", text: JSON.stringify(scanGenes(args), null, 2) }] };
+                    result = scanGenes(args);
+                    break;
                 case "wrap_gene":
-                    return { content: [{ type: "text", text: JSON.stringify(wrapGene(args), null, 2) }] };
+                    result = wrapGene(args);
+                    break;
                 case "test_gene":
-                    return { content: [{ type: "text", text: JSON.stringify(testGene(args), null, 2) }] };
+                    result = testGene(args);
+                    break;
                 case "publish_gene":
-                    return { content: [{ type: "text", text: JSON.stringify(publishGene(args), null, 2) }] };
+                    result = publishGene(args);
+                    break;
+                case "list_gene_versions":
+                    result = await geneVersions(args);
+                    break;
+                case "get_mcp_stats":
+                    result = await mcpStats(args);
+                    break;
+                case "auth_status":
+                    result = authStatus();
+                    break;
+                case "login":
+                    result = await login(args);
+                    break;
+                case "logout":
+                    result = logout();
+                    break;
                 default:
+                    logMcpCall({ tool_name: name, success: false, latency_ms: Date.now() - startMs });
                     return { content: [{ type: "text", text: `Unknown tool: ${name}` }], isError: true };
             }
+            logMcpCall({
+                tool_name: name,
+                gene_id: extractGeneId(name, (args || {})),
+                success: true,
+                latency_ms: Date.now() - startMs,
+            });
+            return { content: [{ type: "text", text: JSON.stringify(result, null, 2) }] };
         }
         catch (error) {
+            logMcpCall({
+                tool_name: name,
+                gene_id: extractGeneId(name, (args || {})),
+                success: false,
+                latency_ms: Date.now() - startMs,
+            });
             return { content: [{ type: "text", text: `Error: ${error.message}` }], isError: true };
         }
     });

package/dist/server.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/tools.d.ts CHANGED Viewed

@@ -1,4 +1,4 @@
-import { type Gene, type GeneListResult, type ArenaRankingsResult, type GeneStats, type LeaderboardEntry, type DeveloperProfile, type ArenaSubmitResult, type InstallResult } from "./cloud.js";
+import { type Gene, type GeneListResult, type ArenaRankingsResult, type GeneStats, type LeaderboardEntry, type DeveloperProfile, type ArenaSubmitResult, type InstallResult, type GeneVersionEntry, type McpStatsResult } from "./cloud.js";
 export declare function searchGenes(args: {
     query?: string;
     domain?: string;
@@ -32,6 +32,37 @@ export declare function developerProfile(args: {
     username: string;
 }): Promise<DeveloperProfile>;
 export { listLocalGenes, listLocalAgents, createLocalAgent, agentRun, compileGene, runGene, initGene, scanGenes, wrapGene, testGene, publishGene } from "./local.js";
+export declare function mcpStats(args: {
+    days?: number;
+}): Promise<McpStatsResult>;
+export declare function geneVersions(args: {
+    owner: string;
+    name: string;
+}): Promise<{
+    versions: GeneVersionEntry[];
+    count: number;
+}>;
+export interface AuthStatusResult {
+    logged_in: boolean;
+    username: string | null;
+    provider: string | null;
+    expires_in_minutes: number | null;
+}
+export declare function authStatus(): AuthStatusResult;
+export interface LoginResult {
+    success: boolean;
+    username: string | null;
+    provider: string | null;
+    message: string;
+}
+export declare function login(args: {
+    provider?: string;
+}): Promise<LoginResult>;
+export interface LogoutResult {
+    success: boolean;
+    message: string;
+}
+export declare function logout(): LogoutResult;
 export declare function submitToArena(args: {
     gene_id: string;
     fitness_value: number;

package/dist/tools.js CHANGED Viewed

@@ -1,4 +1,6 @@
-import { listGenes, getGene, getArenaRankings, getGeneStatsRpc, getReputationLeaderboard, getDeveloperProfile, arenaSubmitCloud, installGene, } from "./cloud.js";
+import { listGenes, getGene, getArenaRankings, getGeneStatsRpc, getReputationLeaderboard, getDeveloperProfile, arenaSubmitCloud, installGene, listGeneVersions as listGeneVersionsCloud, getMcpStats as getMcpStatsCloud, loadCloudConfig, } from "./cloud.js";
+import { loadCredentials, saveCredentials, clearCredentials, generateCodeVerifier, generateCodeChallenge, waitForOAuthCallback, } from "./auth.js";
+import { openBrowser } from "./open-browser.js";
 export async function searchGenes(args) {
     return listGenes({
         query: args.query,
@@ -37,6 +39,104 @@ export async function developerProfile(args) {
     return getDeveloperProfile(args.username);
 }
 export { listLocalGenes, listLocalAgents, createLocalAgent, agentRun, compileGene, runGene, initGene, scanGenes, wrapGene, testGene, publishGene } from "./local.js";
+export async function mcpStats(args) {
+    return getMcpStatsCloud(args.days || 7);
+}
+export async function geneVersions(args) {
+    if (!args.owner || !args.name)
+        throw new Error("owner and name are required");
+    const versions = await listGeneVersionsCloud(args.owner, args.name);
+    return { versions, count: versions.length };
+}
+export function authStatus() {
+    const creds = loadCredentials();
+    if (!creds) {
+        return { logged_in: false, username: null, provider: null, expires_in_minutes: null };
+    }
+    const remaining = Math.max(0, Math.round((creds.expires_at - Date.now()) / 60_000));
+    return {
+        logged_in: true,
+        username: creds.user.username,
+        provider: creds.provider,
+        expires_in_minutes: remaining,
+    };
+}
+export async function login(args) {
+    const existing = loadCredentials();
+    if (existing) {
+        return {
+            success: true,
+            username: existing.user.username,
+            provider: existing.provider,
+            message: `Already logged in as ${existing.user.username} (via ${existing.provider}).`,
+        };
+    }
+    const provider = (args.provider || "gitlab");
+    const config = loadCloudConfig();
+    const callbackPort = 9876;
+    const codeVerifier = generateCodeVerifier();
+    const codeChallenge = generateCodeChallenge(codeVerifier);
+    const authUrl = `${config.endpoint}/auth/v1/authorize?provider=${provider}` +
+        `&redirect_to=http://localhost:${callbackPort}/callback` +
+        `&code_challenge=${codeChallenge}` +
+        `&code_challenge_method=S256`;
+    openBrowser(authUrl);
+    try {
+        const callbackResult = await waitForOAuthCallback(callbackPort);
+        let accessToken;
+        let refreshToken;
+        if (callbackResult.startsWith("implicit:")) {
+            const parts = callbackResult.split(":");
+            accessToken = parts.slice(1, -1).join(":");
+            refreshToken = parts[parts.length - 1];
+        }
+        else {
+            const tokenRes = await fetch(`${config.endpoint}/auth/v1/token?grant_type=pkce`, {
+                method: "POST",
+                headers: { "Content-Type": "application/json", apikey: config.anonKey },
+                body: JSON.stringify({ auth_code: callbackResult, code_verifier: codeVerifier }),
+            });
+            if (!tokenRes.ok) {
+                const err = await tokenRes.text();
+                return { success: false, username: null, provider: null, message: `Authentication failed: ${err}` };
+            }
+            const tokenData = (await tokenRes.json());
+            accessToken = tokenData.access_token;
+            refreshToken = tokenData.refresh_token;
+        }
+        const userRes = await fetch(`${config.endpoint}/auth/v1/user`, {
+            headers: { Authorization: `Bearer ${accessToken}`, apikey: config.anonKey },
+        });
+        const userData = (await userRes.json());
+        const meta = userData.user_metadata || {};
+        const username = meta.user_name || meta.preferred_username || meta.name ||
+            meta.nickname || meta.email?.split("@")[0] || "unknown";
+        saveCredentials({
+            access_token: accessToken,
+            refresh_token: refreshToken,
+            expires_at: Date.now() + 3600 * 1000,
+            provider,
+            user: {
+                id: userData.id,
+                username,
+                avatar_url: meta.avatar_url || null,
+                provider_id: meta.provider_id || meta.sub || "",
+            },
+        });
+        return { success: true, username, provider, message: `Logged in as ${username} (via ${provider}).` };
+    }
+    catch (err) {
+        return { success: false, username: null, provider: null, message: err.message || "Login failed." };
+    }
+}
+export function logout() {
+    const existing = loadCredentials();
+    if (!existing) {
+        return { success: true, message: "Not currently logged in." };
+    }
+    clearCredentials();
+    return { success: true, message: `Logged out (was: ${existing.user.username} via ${existing.provider}).` };
+}
 export async function submitToArena(args) {
     if (!args.gene_id)
         throw new Error("gene_id is required");

package/dist/tools.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/package.json CHANGED Viewed

@@ -1,6 +1,6 @@
 {
   "name": "@rotifer/mcp-server",
-  "version": "0.7.0",
+  "version": "0.7.5",
   "description": "Rotifer Protocol MCP Server — search, compare, explore, install, and execute Genes via Model Context Protocol",
   "type": "module",
   "bin": {