@roarpeng/graphflow 1.9.4 → 1.9.12

package/dist/graph/file-indexer.js

@@ -13,11 +13,13 @@ exports.indexSingleFile = indexSingleFile;
 const node_fs_1 = require("node:fs");
 const node_path_1 = require("node:path");
 const node_crypto_1 = require("node:crypto");
-const hash_js_1 = require("../utils/hash.js");
 const logger_js_1 = require("../utils/logger.js");
 const index_js_1 = require("./language-indexers/index.js");
 const markdown_js_1 = require("./language-indexers/markdown.js");
+const markdown_js_2 = require("./language-indexers/markdown.js");
 const embeddings_js_1 = require("../learning/embeddings.js");
+const document_convert_js_1 = require("./document-convert.js");
+const document_semantic_bridge_js_1 = require("./document-semantic-bridge.js");
 var file_indexer_walker_js_1 = require("./file-indexer-walker.js");
 Object.defineProperty(exports, "DEFAULT_EXTENSIONS", { enumerable: true, get: function () { return file_indexer_walker_js_1.DEFAULT_EXTENSIONS; } });
 Object.defineProperty(exports, "DEFAULT_MAX_FILE_SIZE", { enumerable: true, get: function () { return file_indexer_walker_js_1.DEFAULT_MAX_FILE_SIZE; } });
@@ -44,12 +46,20 @@ async function processFile(file, cacheState, forceReindex, client) {
     const relPath = file.relPath;
     const mtimeMs = file.mtimeMs;
     const prev = cacheState[relPath];
+    const officeDoc = (0, document_convert_js_1.isOfficeDocumentPath)(relPath);
     let content = "";
     let currentHash = "";
     let isChanged = forceReindex;
+    let bytes;
     if (!prev || prev.mtimeMs !== mtimeMs) {
-        content = (0, node_fs_1.readFileSync)(file.absPath, "utf8");
-        currentHash = (0, node_crypto_1.createHash)("md5").update(content).digest("hex");
+        if (officeDoc) {
+            bytes = (0, node_fs_1.readFileSync)(file.absPath);
+            currentHash = (0, node_crypto_1.createHash)("md5").update(bytes).digest("hex");
+        }
+        else {
+            content = (0, node_fs_1.readFileSync)(file.absPath, "utf8");
+            currentHash = (0, node_crypto_1.createHash)("md5").update(content).digest("hex");
+        }
         if (!prev || prev.hash !== currentHash) {
             isChanged = true;
         }
@@ -57,36 +67,62 @@ async function processFile(file, cacheState, forceReindex, client) {
     if (!isChanged) {
         return null;
     }
-    // 清理该文件在图存储中的旧节点（不同 relPath 的节点互不重叠，并行安全）
-    if (client.deleteNode) {
-        await pruneFileFromGraph(client, relPath);
+    let documentSemantic;
+    if (officeDoc) {
+        if (!bytes) {
+            bytes = (0, node_fs_1.readFileSync)(file.absPath);
+            currentHash = (0, node_crypto_1.createHash)("md5").update(bytes).digest("hex");
+        }
+        const converted = await (0, document_convert_js_1.convertDocumentToMarkdown)(file.absPath, bytes);
+        if (!converted.markdown) {
+            logger_js_1.logger.info({ relPath, reason: converted.skippedReason ?? "convert-failed" }, "skipping office/PDF document (no markdown)");
+            // Cache hash so we do not retry every index until the file changes.
+            cacheState[relPath] = { mtimeMs, hash: currentHash, numNodes: 0 };
+            return null;
+        }
+        content = converted.markdown;
+        documentSemantic = {
+            relPath,
+            outline: (0, document_semantic_bridge_js_1.outlineFromMarkdown)(content),
+            excerpt: content.slice(0, 6000),
+        };
     }
-    if (!content) {
+    else if (!content) {
         content = (0, node_fs_1.readFileSync)(file.absPath, "utf8");
         currentHash = (0, node_crypto_1.createHash)("md5").update(content).digest("hex");
     }
+    // 清理该文件在图存储中的旧节点（不同 relPath 的节点互不重叠，并行安全）
+    if (client.deleteNode ?? client.deleteNodes) {
+        await pruneFileFromGraph(client, [relPath]);
+    }
     const fileNodeId = `file:${relPath}`;
     const moduleNodeId = `module:${(0, file_indexer_nodes_js_2.moduleKey)(relPath)}`;
-    const indexer = (0, index_js_1.getIndexerForFile)(relPath);
-    const language = indexer?.language ?? ((0, file_indexer_walker_js_2.extOf)(relPath).replace(/^\./, "") || "text");
+    const indexer = officeDoc ? markdown_js_2.markdownIndexer : (0, index_js_1.getIndexerForFile)(relPath);
+    const language = officeDoc
+        ? "document"
+        : (indexer?.language ?? ((0, file_indexer_walker_js_2.extOf)(relPath).replace(/^\./, "") || "text"));
     let declared = [];
     let imports = [];
     let fileCalls = [];
     let fileInherits = [];
     if (indexer) {
         const extracted = await indexer.extract(relPath, content);
-        declared = extracted.symbols
-            .filter((sym) => sym && typeof sym.name === "string")
-            .map((sym) => ({
-            ...sym,
-            nodeId: `symbol:${relPath}:${(0, hash_js_1.hashTextHex)(sym.name)}`,
-        }));
+        // 同文件同名符号在此统一消歧：首个保留旧 ID，冲突项追加确定性哈希段
+        declared = (0, file_indexer_nodes_js_2.assignSymbolNodeIds)(relPath, extracted.symbols);
         imports = extracted.imports.map((imp) => imp.module);
         fileCalls = extracted.calls ?? [];
         fileInherits = extracted.inherits ?? [];
     }
     const { nodes: fileNodes, edges: fileEdges } = (0, file_indexer_nodes_js_2.buildFileNodesAndEdges)(relPath, file.size, language, declared, imports);
-    if (language === "markdown" && declared.length > 0) {
+    if (officeDoc) {
+        const fileNode = fileNodes.find((n) => n.id === fileNodeId);
+        if (fileNode?.metadata) {
+            fileNode.metadata.sourceFormat = (0, file_indexer_walker_js_2.extOf)(relPath).replace(/^\./, "") || "document";
+            fileNode.metadata.convertedVia = "anydoc";
+            fileNode.metadata.indexedAs = "markdown";
+        }
+    }
+    if ((language === "markdown" || language === "document") && declared.length > 0) {
         const docEdges = (0, markdown_js_1.buildDocumentEdges)(fileNodeId, declared);
         fileEdges.push(...docEdges);
     }
@@ -113,6 +149,7 @@ async function processFile(file, cacheState, forceReindex, client) {
             hash: currentHash,
             numNodes: fileNodes.length,
         },
+        ...(documentSemantic ? { documentSemantic } : {}),
     };
 }
 async function indexWorkspaceFiles(client, rootDir, options) {
@@ -129,10 +166,12 @@ async function indexWorkspaceFiles(client, rootDir, options) {
     }
     const scanned = (0, file_indexer_walker_js_2.walkScannableFiles)(rootDir, includeExtensions, maxFileSizeBytes);
     const currentRelPaths = new Set(scanned.map((file) => file.relPath));
-    if (client.deleteNode) {
-        for (const relPath of Object.keys(cacheState)) {
-            if (!currentRelPaths.has(relPath)) {
-                await pruneFileFromGraph(client, relPath);
+    if (client.deleteNode ?? client.deleteNodes) {
+        const stale = Object.keys(cacheState).filter((relPath) => !currentRelPaths.has(relPath));
+        if (stale.length > 0) {
+            // 批量清理：单次快照读取 + 单次批量删除，避免逐文件全量读写图文件
+            await pruneFileFromGraph(client, stale);
+            for (const relPath of stale) {
                 delete cacheState[relPath];
             }
         }
@@ -140,6 +179,7 @@ async function indexWorkspaceFiles(client, rootDir, options) {
     const nodes = [];
     const edges = [];
     const parsed = [];
+    const documentTargets = [];
     let processedCount = 0;
     for (let i = 0; i < scanned.length; i += concurrency) {
         if (signal?.aborted) {
@@ -164,8 +204,12 @@ async function indexWorkspaceFiles(client, rootDir, options) {
                 edges.push(...result.fileEdges);
                 parsed.push(result.parsedEntry);
                 cacheState[result.relPath] = result.cacheEntry;
+                if (result.documentSemantic) {
+                    documentTargets.push(result.documentSemantic);
+                }
             }
             processedCount += 1;
+            options?.onProgress?.(processedCount, scanned.length);
             if (processedCount > 0 && processedCount % 100 === 0) {
                 logger_js_1.logger.info({ processed: processedCount, total: scanned.length, percent: `${((processedCount / scanned.length) * 100).toFixed(1)}%` }, "工作区索引进度");
             }
@@ -198,16 +242,30 @@ async function indexWorkspaceFiles(client, rootDir, options) {
     await client.upsertNodes(nodes);
     await client.upsertEdges((0, file_indexer_edges_js_1.dedupEdges)(edges));
     (0, file_indexer_cache_js_2.saveCacheState)(cachePath, cacheState);
-    return {
+    const agentWorkItems = (0, document_semantic_bridge_js_1.buildDocumentSemanticWorkItems)(documentTargets);
+    const result = {
         indexedFiles: nodes.filter((node) => node.type === "File").length,
         indexedSymbols: nodes.filter((node) => node.type === "Symbol").length,
         indexedReferences: referenceCount + callEdgeCount + inheritEdgeCount,
     };
+    if (agentWorkItems.length > 0) {
+        result.agentWorkItems = agentWorkItems;
+        result.agentInstructions = [
+            "Document semantic bridge: structural sections/chunks are already indexed.",
+            "Optional: answer each document-semantic-* work item with your model,",
+            'then graphflow_insight({ mode: "submit", workItemId, response }) to store key entities/claims.',
+        ].join(" ");
+    }
+    return result;
 }
 // ── Single-file incremental indexing ─────────────────────────────────
 async function indexSingleFile(client, rootDir, absPath, options) {
     const includeExtensions = options?.includeExtensions ?? file_indexer_walker_js_2.DEFAULT_EXTENSIONS;
     const maxFileSizeBytes = options?.maxFileSizeBytes ?? file_indexer_walker_js_2.DEFAULT_MAX_FILE_SIZE;
+    const officeDoc = (0, document_convert_js_1.isOfficeDocumentPath)(absPath);
+    const sizeLimit = officeDoc
+        ? Math.max(maxFileSizeBytes, document_convert_js_1.DEFAULT_DOCUMENT_MAX_FILE_SIZE)
+        : maxFileSizeBytes;
     // Validate extension
     if (!includeExtensions.some((ext) => absPath.toLowerCase().endsWith(ext))) {
         return { indexedFiles: 0, indexedSymbols: 0, indexedReferences: 0, skipped: true, reason: "extension not in includeExtensions" };
@@ -220,13 +278,38 @@ async function indexSingleFile(client, rootDir, absPath, options) {
     catch {
         return { indexedFiles: 0, indexedSymbols: 0, indexedReferences: 0, skipped: true, reason: "file stat failed" };
     }
-    if (stat.size > maxFileSizeBytes) {
+    if (stat.size > sizeLimit) {
         return { indexedFiles: 0, indexedSymbols: 0, indexedReferences: 0, skipped: true, reason: "file exceeds maxFileSizeBytes" };
     }
     const relPath = (0, file_indexer_walker_js_2.normalizePath)((0, node_path_1.relative)(rootDir, absPath));
     const mtimeMs = stat.mtimeMs;
-    const content = (0, node_fs_1.readFileSync)(absPath, "utf8");
-    const currentHash = (0, node_crypto_1.createHash)("md5").update(content).digest("hex");
+    let content = "";
+    let currentHash = "";
+    let documentSemantic;
+    if (officeDoc) {
+        const bytes = (0, node_fs_1.readFileSync)(absPath);
+        currentHash = (0, node_crypto_1.createHash)("md5").update(bytes).digest("hex");
+        const converted = await (0, document_convert_js_1.convertDocumentToMarkdown)(absPath, bytes);
+        if (!converted.markdown) {
+            return {
+                indexedFiles: 0,
+                indexedSymbols: 0,
+                indexedReferences: 0,
+                skipped: true,
+                reason: converted.skippedReason ?? "document-convert-failed",
+            };
+        }
+        content = converted.markdown;
+        documentSemantic = {
+            relPath,
+            outline: (0, document_semantic_bridge_js_1.outlineFromMarkdown)(content),
+            excerpt: content.slice(0, 6000),
+        };
+    }
+    else {
+        content = (0, node_fs_1.readFileSync)(absPath, "utf8");
+        currentHash = (0, node_crypto_1.createHash)("md5").update(content).digest("hex");
+    }
     const cachePath = (0, node_path_1.join)(rootDir, file_indexer_cache_js_2.CACHE_DIR, file_indexer_cache_js_2.CACHE_FILE);
     const cacheState = (0, file_indexer_cache_js_2.loadCacheState)(cachePath, false);
     const prev = cacheState[relPath];
@@ -235,25 +318,23 @@ async function indexSingleFile(client, rootDir, absPath, options) {
         return { indexedFiles: 0, indexedSymbols: 0, indexedReferences: 0, skipped: true, reason: "unchanged" };
     }
     // Prune existing nodes for this file
-    if (client.deleteNode) {
-        await pruneFileFromGraph(client, relPath);
+    if (client.deleteNode ?? client.deleteNodes) {
+        await pruneFileFromGraph(client, [relPath]);
     }
     const nodes = [];
     const edges = [];
-    const indexer = (0, index_js_1.getIndexerForFile)(relPath);
-    const language = indexer?.language ?? (relPath.split(".").pop() ?? "text");
+    const indexer = officeDoc ? markdown_js_2.markdownIndexer : (0, index_js_1.getIndexerForFile)(relPath);
+    const language = officeDoc
+        ? "document"
+        : (indexer?.language ?? (relPath.split(".").pop() ?? "text"));
     let declared = [];
     let imports = [];
     let fileCalls = [];
     let fileInherits = [];
     if (indexer) {
         const extracted = await indexer.extract(relPath, content);
-        declared = extracted.symbols
-            .filter((sym) => sym && typeof sym.name === "string")
-            .map((sym) => ({
-            ...sym,
-            nodeId: `symbol:${relPath}:${(0, hash_js_1.hashTextHex)(sym.name)}`,
-        }));
+        // 同文件同名符号在此统一消歧：首个保留旧 ID，冲突项追加确定性哈希段
+        declared = (0, file_indexer_nodes_js_2.assignSymbolNodeIds)(relPath, extracted.symbols);
         imports = extracted.imports.map((imp) => imp.module);
         fileCalls = extracted.calls ?? [];
         fileInherits = extracted.inherits ?? [];
@@ -262,7 +343,15 @@ async function indexSingleFile(client, rootDir, absPath, options) {
     nodes.push(...fileNodes);
     edges.push(...fileEdges);
     const fileNodeId = `file:${relPath}`;
-    if (language === "markdown" && declared.length > 0) {
+    if (officeDoc) {
+        const fileNode = nodes.find((n) => n.id === fileNodeId);
+        if (fileNode?.metadata) {
+            fileNode.metadata.sourceFormat = (0, file_indexer_walker_js_2.extOf)(relPath).replace(/^\./, "") || "document";
+            fileNode.metadata.convertedVia = "anydoc";
+            fileNode.metadata.indexedAs = "markdown";
+        }
+    }
+    if ((language === "markdown" || language === "document") && declared.length > 0) {
         const docEdges = (0, markdown_js_1.buildDocumentEdges)(fileNodeId, declared);
         edges.push(...docEdges);
     }
@@ -301,33 +390,56 @@ async function indexSingleFile(client, rootDir, absPath, options) {
     };
     (0, file_indexer_cache_js_2.saveCacheState)(cachePath, cacheState);
     logger_js_1.logger.info({ relPath, symbols: declared.length, references: referenceCount }, "Single file indexed");
-    return {
+    const agentWorkItems = documentSemantic
+        ? (0, document_semantic_bridge_js_1.buildDocumentSemanticWorkItems)([documentSemantic])
+        : [];
+    const out = {
         indexedFiles: 1,
         indexedSymbols: declared.length,
         indexedReferences: referenceCount,
         skipped: false,
     };
+    if (agentWorkItems.length > 0) {
+        out.agentWorkItems = agentWorkItems;
+        out.agentInstructions =
+            "Document semantic bridge: submit document-semantic-* via graphflow_insight to store key entities/claims.";
+    }
+    return out;
 }
 // ── Internal helpers ─────────────────────────────────────────────────
-async function pruneFileFromGraph(client, relPath) {
-    if (!client.readSnapshot || !client.deleteNode) {
+async function pruneFileFromGraph(client, relPaths) {
+    if (!client.readSnapshot || (!client.deleteNode && !client.deleteNodes)) {
         return;
     }
     const snapshot = client.readSnapshot();
-    const fileNodeId = `file:${relPath}`;
-    const moduleNodeId = `module:${(0, file_indexer_nodes_js_2.moduleKey)(relPath)}`;
-    const symbolPrefix = `symbol:${relPath}:`;
     // 先收集要删除的节点 ID 集合，便于后续 O(1) 查找悬空边
     const deletedIds = new Set();
-    const toDelete = snapshot.nodes.filter((node) => node.id === fileNodeId || node.id === moduleNodeId || node.id.startsWith(symbolPrefix));
-    for (const node of toDelete) {
-        deletedIds.add(node.id);
-        await client.deleteNode(node.id);
-    }
-    // 清理跨文件的悬空引用边：删除任何 from 或 to 指向已删除节点 ID 的边。
-    // 某些传输后端（如 MCP HTTP）的 deleteNode 不保证级联清理边，因此显式清理以确保一致。
-    if (client.deleteEdge && deletedIds.size > 0) {
-        // 重新读取快照以获取当前边状态（部分后端的 deleteNode 可能已级联删除相关边）
+    for (const relPath of relPaths) {
+        const fileNodeId = `file:${relPath}`;
+        const moduleNodeId = `module:${(0, file_indexer_nodes_js_2.moduleKey)(relPath)}`;
+        const symbolPrefix = `symbol:${relPath}:`;
+        for (const node of snapshot.nodes) {
+            if (node.id === fileNodeId ||
+                node.id === moduleNodeId ||
+                node.id.startsWith(symbolPrefix)) {
+                deletedIds.add(node.id);
+            }
+        }
+    }
+    if (deletedIds.size === 0) {
+        return;
+    }
+    const ids = Array.from(deletedIds);
+    if (client.deleteNodes) {
+        // 批量删除：后端单次读+写（file）/ 单事务（sqlite / memory），并级联清理悬空边
+        await client.deleteNodes(ids);
+        return;
+    }
+    // 旧路径（如 MCP HTTP 试点）：逐节点删除 + 显式清理跨文件悬空边。
+    for (const id of ids) {
+        await client.deleteNode?.(id);
+    }
+    if (client.deleteEdge) {
         const currentEdges = client.readSnapshot().edges;
         for (const edge of currentEdges) {
             if (deletedIds.has(edge.from) || deletedIds.has(edge.to)) {

package/dist/graph/file-indexer.js.map

@@ -1 +1 @@
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package/dist/graph/graph-compression.d.ts

@@ -30,13 +30,22 @@ export interface PageRankOptions {
     iterations?: number;
     edgeWeights?: Partial<Record<GraphEdge["relation"], number>>;
 }
-/** Test/diagnostic hook: cache hit/miss counters. */
+/** Test/diagnostic hook: cache hit/miss counters (hits includes fast hits). */
 export declare const pageRankCacheStats: {
     hits: number;
     misses: number;
+    fastHits: number;
 };
-/** Test hook: clear the PageRank cache. */
+/** Test hook: clear the PageRank cache and mutation markers. */
 export declare function resetPageRankCache(): void;
+/**
+ * 标记图发生变更，作为 PageRank 缓存的影响面失效信号：
+ * - 不带 ids：影响面未知，全局失效（所有早于本次刻度的条目作废）；
+ * - 带 ids：仅触及这些节点的条目失效。
+ * 说明：该标记是"避免每次上下文打包全图重算"的优化手段；即使变更未被标记，
+ * 子图指纹仍会兜底保证数值正确性（相关边变了 → 指纹不同 → 重算）。
+ */
+export declare function markGraphMutated(ids?: Iterable<string>): void;
 /**
  * Computes weighted PageRank over a node/edge set. Used to surface "central"
  * nodes (frequently-referenced functions, core modules) that should be

package/dist/graph/graph-compression.d.ts.map

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