@roarpeng/graphflow 1.0.9 → 1.2.0

package/dist/graph/file-indexer.js.map

@@ -1 +1 @@
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package/dist/graph/graphify-file-client.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"graphify-file-client.d.ts","sourceRoot":"","sources":["../../src/graph/graphify-file-client.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,SAAS,EAAE,SAAS,EAAE,MAAM,eAAe,CAAC;AAI1D,UAAU,UAAU;IAClB,KAAK,EAAE,SAAS,EAAE,CAAC;IACnB,KAAK,EAAE,SAAS,EAAE,CAAC;CACpB;AAED,qBAAa,kBAAkB;IACjB,OAAO,CAAC,QAAQ,CAAC,SAAS;gBAAT,SAAS,EAAE,MAAM;IAExC,WAAW,CAAC,KAAK,EAAE,SAAS,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC;IAc9C,WAAW,CAAC,KAAK,EAAE,SAAS,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC;IAepD,YAAY,IAAI,UAAU;IAIpB,cAAc,CAAC,KAAK,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,EAAE,CAAC;IAmBnD,aAAa,CAAC,GAAG,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,SAAS,EAAE,CAAC;IAMlD,YAAY,CAChB,OAAO,EAAE,MAAM,EAAE,EACjB,SAAS,CAAC,EAAE,SAAS,CAAC,UAAU,CAAC,EAAE,EACnC,SAAS,GAAE,KAAK,GAAG,IAAI,GAAG,MAAe,GACxC,OAAO,CAAC;QAAE,IAAI,EAAE,SAAS,CAAC;QAAC,GAAG,EAAE,SAAS,CAAC,UAAU,CAAC,CAAA;KAAE,EAAE,CAAC;IAiC7D,OAAO,CAAC,UAAU;IAelB,OAAO,CAAC,SAAS;IA4BjB,OAAO,CAAC,UAAU;IAiBlB,OAAO,CAAC,OAAO;IAIT,UAAU,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAOrC,UAAU,CAAC,IAAI,EAAE,MAAM,EAAE,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,SAAS,CAAC,UAAU,CAAC,GAAG,OAAO,CAAC,IAAI,CAAC;CAO3F"}
+{"version":3,"file":"graphify-file-client.d.ts","sourceRoot":"","sources":["../../src/graph/graphify-file-client.ts"],"names":[],"mappings":"AAGA,OAAO,KAAK,EAAE,SAAS,EAAE,SAAS,EAAE,MAAM,eAAe,CAAC;AAI1D,UAAU,UAAU;IAClB,KAAK,EAAE,SAAS,EAAE,CAAC;IACnB,KAAK,EAAE,SAAS,EAAE,CAAC;CACpB;AAED,qBAAa,kBAAkB;IACjB,OAAO,CAAC,QAAQ,CAAC,SAAS;gBAAT,SAAS,EAAE,MAAM;IAExC,WAAW,CAAC,KAAK,EAAE,SAAS,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC;IAc9C,WAAW,CAAC,KAAK,EAAE,SAAS,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC;IAepD,YAAY,IAAI,UAAU;IAIpB,cAAc,CAAC,KAAK,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,EAAE,CAAC;IAmBnD,aAAa,CAAC,GAAG,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,SAAS,EAAE,CAAC;IAMlD,YAAY,CAChB,OAAO,EAAE,MAAM,EAAE,EACjB,SAAS,CAAC,EAAE,SAAS,CAAC,UAAU,CAAC,EAAE,EACnC,SAAS,GAAE,KAAK,GAAG,IAAI,GAAG,MAAe,GACxC,OAAO,CAAC;QAAE,IAAI,EAAE,SAAS,CAAC;QAAC,GAAG,EAAE,SAAS,CAAC,UAAU,CAAC,CAAA;KAAE,EAAE,CAAC;IAiC7D,OAAO,CAAC,UAAU;IAelB,OAAO,CAAC,SAAS;IA4BjB,OAAO,CAAC,UAAU;IA2BlB,OAAO,CAAC,OAAO;IAIT,UAAU,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAOrC,UAAU,CAAC,IAAI,EAAE,MAAM,EAAE,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,SAAS,CAAC,UAAU,CAAC,GAAG,OAAO,CAAC,IAAI,CAAC;CAO3F"}

package/dist/graph/graphify-file-client.js

@@ -135,12 +135,22 @@ class GraphifyFileClient {
         const payload = JSON.stringify(store, null, 2);
         const tempPath = (0, node_path_1.join)(dir, `.graphflow-graph-${process.pid}-${(0, node_crypto_1.randomBytes)(4).toString("hex")}.tmp`);
         (0, node_fs_1.writeFileSync)(tempPath, payload, "utf8");
-        try {
-            (0, node_fs_1.renameSync)(tempPath, this.storePath);
-        }
-        catch (error) {
-            (0, node_fs_1.rmSync)(tempPath, { force: true });
-            throw error;
+        // Windows 上 rename 可能因文件锁定而失败，添加重试机制
+        const maxRetries = 5;
+        for (let i = 0; i < maxRetries; i++) {
+            try {
+                (0, node_fs_1.renameSync)(tempPath, this.storePath);
+                return;
+            }
+            catch (error) {
+                const nodeError = error;
+                if (nodeError.code === "EPERM" && i < maxRetries - 1) {
+                    Atomics.wait(new Int32Array(new SharedArrayBuffer(4)), 0, 0, 50);
+                    continue;
+                }
+                (0, node_fs_1.rmSync)(tempPath, { force: true });
+                throw error;
+            }
         }
     }
     edgeKey(edge) {

package/dist/graph/graphify-file-client.js.map

@@ -1 +1 @@
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package/dist/index.d.ts

@@ -10,6 +10,6 @@ export { hasUsableLlmProvider } from "./config/llm-availability";
 export { buildAgentDelegatedPlanInsight, buildAgentInsightWorkItems, summarizeInsightForContext, type AgentDelegatedPlanInsight, type AgentDelegationMode, type AgentWorkItem, } from "./core/agent-delegation";
 export { planInsightResult, type PlanInsightResult } from "./surfaces/cli/runtime/routing";
 export { createGraphClient, type GraphClient, } from "./graph/client-factory";
-export { validateConfig, loadConfig, loadConfigSafe, type LoadConfigResult } from "./config/loader";
+export { validateConfig, loadConfig, loadConfigSafe, type LoadConfigResult, validateConfigDetailed, type ConfigValidationResult, type ValidationIssue } from "./config/loader";
 export { graphflowSkills, invokeSkill, listSkills, type GraphFlowSkillName, type SkillInputByName, type SkillOutputByName, type CompressContextInput, type CompressContextOutput, type PlanTaskInput, type PlanTaskOutput, type PlanInsightInput, type PlanInsightOutput, type IndexGraphInput, type IndexGraphOutput, type InspectGraphInput, type InspectGraphOutput, type ExpandAnchorInput, type ExpandAnchorOutput, type RunTaskInput, type RunTaskOutput, } from "./skills";
 //# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -1 +1 @@
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package/dist/index.js

@@ -1,6 +1,6 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.listSkills = exports.invokeSkill = exports.graphflowSkills = exports.loadConfigSafe = exports.loadConfig = exports.validateConfig = exports.createGraphClient = exports.planInsightResult = exports.summarizeInsightForContext = exports.buildAgentInsightWorkItems = exports.buildAgentDelegatedPlanInsight = exports.hasUsableLlmProvider = exports.startStdioServer = exports.getToolDefinitions = exports.executeToolCall = exports.createMcpServer = exports.formatCliResult = exports.parseCliOptions = exports.assertGraphFlowRuntime = exports.installMcpToDetectedAgents = exports.formatModelConfigGuide = exports.detectInstalledAgents = exports.buildMcpServerNode = exports.planAndBrainstormResult = exports.planAndBrainstorm = exports.runLearningNightlyResult = exports.runLearningNightly = exports.diagnoseRoutingResult = exports.diagnoseRouting = exports.resolveConfig = exports.getSkillInsights = exports.inspectGraph = exports.indexGraph = exports.saveGraphFlowSettings = exports.validateSettingsForRouting = exports.validateSettingsForGraphIndex = exports.indexGraphFromSettings = exports.testRoutingAndIndexGraph = exports.getSettingsPanelStatus = exports.getGraphFlowSettings = exports.expandAnchor = exports.previewContext = exports.mergeAgentInsightResult = exports.submitAgentInsightResult = exports.reportOutcome = exports.runTaskResult = exports.runTask = exports.createVsCodeRuntime = exports.orchestrate = void 0;
+exports.listSkills = exports.invokeSkill = exports.graphflowSkills = exports.validateConfigDetailed = exports.loadConfigSafe = exports.loadConfig = exports.validateConfig = exports.createGraphClient = exports.planInsightResult = exports.summarizeInsightForContext = exports.buildAgentInsightWorkItems = exports.buildAgentDelegatedPlanInsight = exports.hasUsableLlmProvider = exports.startStdioServer = exports.getToolDefinitions = exports.executeToolCall = exports.createMcpServer = exports.formatCliResult = exports.parseCliOptions = exports.assertGraphFlowRuntime = exports.installMcpToDetectedAgents = exports.formatModelConfigGuide = exports.detectInstalledAgents = exports.buildMcpServerNode = exports.planAndBrainstormResult = exports.planAndBrainstorm = exports.runLearningNightlyResult = exports.runLearningNightly = exports.diagnoseRoutingResult = exports.diagnoseRouting = exports.resolveConfig = exports.getSkillInsights = exports.inspectGraph = exports.indexGraph = exports.saveGraphFlowSettings = exports.validateSettingsForRouting = exports.validateSettingsForGraphIndex = exports.indexGraphFromSettings = exports.testRoutingAndIndexGraph = exports.getSettingsPanelStatus = exports.getGraphFlowSettings = exports.expandAnchor = exports.previewContext = exports.mergeAgentInsightResult = exports.submitAgentInsightResult = exports.reportOutcome = exports.runTaskResult = exports.runTask = exports.createVsCodeRuntime = exports.orchestrate = void 0;
 var orchestrator_1 = require("./core/orchestrator");
 Object.defineProperty(exports, "orchestrate", { enumerable: true, get: function () { return orchestrator_1.orchestrate; } });
 var extension_1 = require("./surfaces/vscode/extension");
@@ -57,6 +57,7 @@ var loader_1 = require("./config/loader");
 Object.defineProperty(exports, "validateConfig", { enumerable: true, get: function () { return loader_1.validateConfig; } });
 Object.defineProperty(exports, "loadConfig", { enumerable: true, get: function () { return loader_1.loadConfig; } });
 Object.defineProperty(exports, "loadConfigSafe", { enumerable: true, get: function () { return loader_1.loadConfigSafe; } });
+Object.defineProperty(exports, "validateConfigDetailed", { enumerable: true, get: function () { return loader_1.validateConfigDetailed; } });
 var skills_1 = require("./skills");
 Object.defineProperty(exports, "graphflowSkills", { enumerable: true, get: function () { return skills_1.graphflowSkills; } });
 Object.defineProperty(exports, "invokeSkill", { enumerable: true, get: function () { return skills_1.invokeSkill; } });

package/dist/index.js.map

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package/dist/integrations/agent-mcp-installer.d.ts

@@ -1,4 +1,4 @@
-export type McpServersKey = "mcpServers" | "servers";
+export type McpServersKey = "mcpServers" | "servers" | "context_servers";
 export interface McpServerNode {
     command: string;
     args: string[];
@@ -52,6 +52,12 @@ export declare function detectInstalledAgents(): DetectedAgent[];
 export declare function getMcpInstallStatus(serverName?: string): McpAgentInstallStatus[];
 /** fnm multishell paths are session-temporary and break MCP after shell restart. */
 export declare function isEphemeralNodePath(nodePath: string): boolean;
+/**
+  * 判断给定的 node 路径是否属于 IDE/编辑器内嵌的 Node 运行时。
+  * 在 TRAE、Cursor、VS Code 等进程环境中，PATH 最前面通常是 IDE 自带的 Node，
+  * 这些路径可能包含空格（如 "TRAE SOLO CN"）且版本不稳定，不适合作为 MCP 启动的运行时。
+  */
+export declare function isIdeBundledNode(nodePath: string): boolean;
 export declare function resolveSystemNodeCommand(): string | undefined;
 export declare function resolveMcpNodeLaunch(options: {
     nodeCommand?: string;
@@ -61,6 +67,24 @@ export declare function resolveMcpNodeLaunch(options: {
     env: Record<string, string>;
 };
 export declare function buildMcpServerNode(options: McpInstallOptions): McpServerNode;
+/** 从 JSON 配置文件中移除指定 MCP 服务器的配置条目 */
+export declare function removeMcpEntry(configPath: string, serversKey: McpServersKey, serverName: string): boolean;
+/** 从 Codex TOML 配置文件中移除指定 MCP 服务器的配置条目 */
+export declare function removeCodexMcpEntry(configPath: string, serverName: string): boolean;
 export declare function installMcpToDetectedAgents(options: McpInstallOptions): McpInstallResult[];
+export interface McpRemoveOptions {
+    /** 仅移除指定 agent 的 MCP 配置（不传则移除所有检测到的 agent） */
+    agentId?: string;
+    serverName?: string;
+}
+export interface McpRemoveResult {
+    agentId: string;
+    agentName: string;
+    configPath: string;
+    removed: boolean;
+    message?: string;
+}
+/** 从所有检测到的 agent 中移除 GraphFlow MCP 配置 */
+export declare function uninstallMcpFromDetectedAgents(options?: McpRemoveOptions): McpRemoveResult[];
 export declare function formatModelConfigGuide(workspaceRoot?: string): string;
 //# sourceMappingURL=agent-mcp-installer.d.ts.map

package/dist/integrations/agent-mcp-installer.d.ts.map

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package/dist/integrations/agent-mcp-installer.js

@@ -3,10 +3,14 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.detectInstalledAgents = detectInstalledAgents;
 exports.getMcpInstallStatus = getMcpInstallStatus;
 exports.isEphemeralNodePath = isEphemeralNodePath;
+exports.isIdeBundledNode = isIdeBundledNode;
 exports.resolveSystemNodeCommand = resolveSystemNodeCommand;
 exports.resolveMcpNodeLaunch = resolveMcpNodeLaunch;
 exports.buildMcpServerNode = buildMcpServerNode;
+exports.removeMcpEntry = removeMcpEntry;
+exports.removeCodexMcpEntry = removeCodexMcpEntry;
 exports.installMcpToDetectedAgents = installMcpToDetectedAgents;
+exports.uninstallMcpFromDetectedAgents = uninstallMcpFromDetectedAgents;
 exports.formatModelConfigGuide = formatModelConfigGuide;
 const node_child_process_1 = require("node:child_process");
 const node_fs_1 = require("node:fs");
@@ -66,8 +70,10 @@ function buildAgentProfiles() {
             markerPaths: [
                 (0, node_path_1.join)(home, ".trae"),
                 (0, node_path_1.join)(home, ".trae-cn"),
+                (0, node_path_1.join)(home, ".trae-aicc"),
                 (0, node_path_1.join)(appData, "Trae"),
                 (0, node_path_1.join)(appData, "Trae CN"),
+                (0, node_path_1.join)(appData, "TRAE SOLO CN"),
             ],
             userTargets: [
                 {
@@ -82,6 +88,12 @@ function buildAgentProfiles() {
                         : (0, node_path_1.join)(home, ".config", "Trae CN", "User", "mcp.json"),
                     serversKey: "mcpServers",
                 },
+                {
+                    configPath: isWindows()
+                        ? (0, node_path_1.join)(appData, "TRAE SOLO CN", "User", "mcp.json")
+                        : (0, node_path_1.join)(home, ".config", "TRAE SOLO CN", "User", "mcp.json"),
+                    serversKey: "mcpServers",
+                },
             ],
         },
         {
@@ -182,6 +194,42 @@ function buildAgentProfiles() {
                 },
             ],
         },
+        // ─── 实验性支持 ───
+        {
+            id: "zed",
+            name: "Zed",
+            // Zed 已在 v0.165+ 支持 MCP（称为 "context servers"）
+            // 配置格式: settings.json 中的 "context_servers" 键
+            markerPaths: [
+                (0, node_path_1.join)(home, ".config", "zed"),
+                isWindows() ? (0, node_path_1.join)(appData, "Zed") : undefined,
+            ].filter(Boolean),
+            userTargets: [
+                {
+                    configPath: isWindows()
+                        ? (0, node_path_1.join)(appData, "Zed", "settings.json")
+                        : (0, node_path_1.join)(home, ".config", "zed", "settings.json"),
+                    serversKey: "context_servers",
+                },
+            ],
+        },
+        {
+            id: "continue",
+            name: "Continue",
+            // Continue 是 VS Code / JetBrains 的 AI 编程助手扩展
+            // MCP 配置写入 ~/.continue/config.yaml 中的 "mcpServers" 节
+            // 注意：Continue 的 config.yaml 格式为 YAML，当前实现仅支持 JSON
+            // 如需完整支持，需额外添加 YAML 读写逻辑
+            markerPaths: [
+                (0, node_path_1.join)(home, ".continue"),
+            ],
+            userTargets: [
+                {
+                    configPath: (0, node_path_1.join)(home, ".continue", "config.json"),
+                    serversKey: "mcpServers",
+                },
+            ],
+        },
     ];
     const customEnv = process.env.GRAPHFLOW_MCP_CUSTOM_TARGETS;
     if (customEnv) {
@@ -279,6 +327,26 @@ function isUsableNodeCommand(nodePath) {
     }
     return (0, node_fs_1.existsSync)(trimmed);
 }
+/**
+  * 判断给定的 node 路径是否属于 IDE/编辑器内嵌的 Node 运行时。
+  * 在 TRAE、Cursor、VS Code 等进程环境中，PATH 最前面通常是 IDE 自带的 Node，
+  * 这些路径可能包含空格（如 "TRAE SOLO CN"）且版本不稳定，不适合作为 MCP 启动的运行时。
+  */
+function isIdeBundledNode(nodePath) {
+    const normalized = nodePath.replace(/\\/g, "/").toLowerCase();
+    const ideMarkers = [
+        "appdata", // Windows %APPDATA% 或 %LOCALAPPDATA% 下的内嵌 Node
+        "modulardata", // TRAE 内嵌 Node 路径特征
+        "trae",
+        "cursor",
+        "vs code",
+        "vscode",
+        "electron",
+        "windsurf",
+        "cline",
+    ];
+    return ideMarkers.some((marker) => normalized.includes(marker.toLowerCase()));
+}
 function resolveSystemNodeCommand() {
     const candidates = [];
     try {
@@ -296,6 +364,15 @@ function resolveSystemNodeCommand() {
     if (!isWindows()) {
         candidates.push("/usr/local/bin/node", "/usr/bin/node");
     }
+    // 第一轮：优先选择非 IDE 内嵌的系统 Node
+    for (const candidate of candidates) {
+        if (isUsableNodeCommand(candidate) &&
+            !isEphemeralNodePath(candidate) &&
+            !isIdeBundledNode(candidate)) {
+            return candidate;
+        }
+    }
+    // 第二轮：回退到原始行为（包括 IDE 内嵌 Node），确保在纯 IDE 环境下也能工作
     for (const candidate of candidates) {
         if (isUsableNodeCommand(candidate) && !isEphemeralNodePath(candidate)) {
             return candidate;
@@ -355,11 +432,13 @@ function buildMcpServerNode(options) {
     const cwd = options.workspaceRoot ?? options.npmScriptCwd ?? process.cwd();
     const workspaceRootEnv = options.workspaceRoot?.trim() ||
         process.env.GRAPHFLOW_WORKSPACE_ROOT?.trim() ||
-        "${workspaceFolder}";
+        "";
     const mcpEnv = {
         ...MCP_STDIO_ENV,
-        GRAPHFLOW_WORKSPACE_ROOT: workspaceRootEnv,
     };
+    if (workspaceRootEnv) {
+        mcpEnv.GRAPHFLOW_WORKSPACE_ROOT = workspaceRootEnv;
+    }
     if (options.strategy === "node-bundled") {
         if (!options.bundledServerPath) {
             throw new Error("bundledServerPath is required for node-bundled strategy");
@@ -403,14 +482,17 @@ function buildMcpServerNode(options) {
             env: {},
         };
     }
+    // npx 策略：不在 MCP 配置中硬编码 cwd 和 GRAPHFLOW_WORKSPACE_ROOT。
+    // MCP client 会使用自己的 cwd 启动进程，MCP server 启动后通过 discover-workspace.ts 自动检测工作区。
+    // 硬编码 Linux 风格的 /repo 占位符在 Windows 上无效，会导致启动失败。
+    const npxEnv = { ...MCP_STDIO_ENV };
     if (isWindows()) {
         const winNpx = resolveWindowsNpxLaunch();
         if (winNpx) {
             return {
                 command: winNpx.command,
                 args: winNpx.args,
-                ...(options.workspaceRoot ? { cwd: options.workspaceRoot } : {}),
-                env: { ...mcpEnv },
+                env: npxEnv,
             };
         }
     }
@@ -418,8 +500,7 @@ function buildMcpServerNode(options) {
     return {
         command: npxCmd,
         args: ["-y", "--package=@roarpeng/graphflow", "graphflow-mcp"],
-        ...(options.workspaceRoot ? { cwd: options.workspaceRoot } : {}),
-        env: { ...mcpEnv },
+        env: npxEnv,
     };
 }
 function uniqueTargets(targets) {
@@ -507,8 +588,16 @@ function writeJsonConfig(path, json) {
     (0, node_fs_1.writeFileSync)(path, `${JSON.stringify(json, null, 2)}\n`, "utf8");
 }
 function removeCodexMcpSection(content, serverName) {
+    // Remove [mcp_servers.serverName] and [mcp_servers.serverName.env] sections
     const blockPattern = new RegExp(`\\n?\\[mcp_servers\\.${escapeRegExp(serverName)}(?:\\.[^\\]]+)?\\][^\\[]*`, "g");
-    return content.replace(blockPattern, "").trimEnd();
+    let cleaned = content.replace(blockPattern, "").trimEnd();
+    // Remove orphaned lines from previous buggy injections — any line that starts with
+    // an array value (["..."]) followed by "enabled = true" and "startup_timeout_sec = 120".
+    // These occur when the TOML args array was written without its section header.
+    // This handles npx entries, npm-script entries, and node-bundled entries.
+    const orphanPattern = new RegExp(`\\n?\\["[^\\]]*\\]\\s*\\n\\s*enabled\\s*=\\s*true\\s*\\n\\s*startup_timeout_sec\\s*=\\s*\\d+`, "g");
+    cleaned = cleaned.replace(orphanPattern, "").trimEnd();
+    return cleaned;
 }
 function formatCodexMcpTomlBlock(serverName, node) {
     const args = node.args.length > 0 ? `args = [${node.args.map((arg) => JSON.stringify(arg)).join(", ")}]` : undefined;
@@ -558,15 +647,21 @@ function injectIntoConfig(configPath, serversKey, serverName, node) {
     const serverExisted = !!servers[serverName];
     const previous = servers[serverName];
     // Merge env: start with previous user env, override with new env.
-    // Clean up stale ELECTRON_RUN_AS_NODE when the new command no longer needs it
-    // (e.g. switched from Electron fallback to system Node).
+    // Clean up stale env vars that should not persist across strategy changes.
     const mergedEnv = {
         ...(previous?.env ?? {}),
         ...(node.env ?? {}),
     };
+    // Clean up stale ELECTRON_RUN_AS_NODE when the new command no longer needs it
+    // (e.g. switched from Electron fallback to system Node).
     if (!node.env?.ELECTRON_RUN_AS_NODE) {
         delete mergedEnv.ELECTRON_RUN_AS_NODE;
     }
+    // Clean up stale GRAPHFLOW_WORKSPACE_ROOT when the new config doesn't include it
+    // (e.g. switched from npx with ${workspaceFolder} to node-bundled without cwd).
+    if (!node.env?.GRAPHFLOW_WORKSPACE_ROOT) {
+        delete mergedEnv.GRAPHFLOW_WORKSPACE_ROOT;
+    }
     servers[serverName] = {
         ...previous,
         ...node,
@@ -585,6 +680,40 @@ function injectIntoConfig(configPath, serversKey, serverName, node) {
         return "injected";
     return "updated";
 }
+/** 从 JSON 配置文件中移除指定 MCP 服务器的配置条目 */
+function removeMcpEntry(configPath, serversKey, serverName) {
+    if (!(0, node_fs_1.existsSync)(configPath)) {
+        return false;
+    }
+    const json = readJsonConfig(configPath);
+    const servers = json[serversKey] ?? {};
+    if (!servers[serverName]) {
+        return false;
+    }
+    delete servers[serverName];
+    if (Object.keys(servers).length === 0) {
+        delete json[serversKey];
+    }
+    else {
+        json[serversKey] = servers;
+    }
+    writeJsonConfig(configPath, json);
+    return true;
+}
+/** 从 Codex TOML 配置文件中移除指定 MCP 服务器的配置条目 */
+function removeCodexMcpEntry(configPath, serverName) {
+    if (!(0, node_fs_1.existsSync)(configPath)) {
+        return false;
+    }
+    const content = (0, node_fs_1.readFileSync)(configPath, "utf8");
+    const existed = new RegExp(`^\\[mcp_servers\\.${escapeRegExp(serverName)}\\]`, "m").test(content);
+    if (!existed) {
+        return false;
+    }
+    const cleaned = removeCodexMcpSection(content, serverName);
+    (0, node_fs_1.writeFileSync)(configPath, cleaned.length > 0 ? `${cleaned}\n` : "", "utf8");
+    return true;
+}
 function installMcpToDetectedAgents(options) {
     const agentIds = new Set(options.agentIdsOverride ?? detectInstalledAgents().map((agent) => agent.id));
     const serverName = options.serverName ?? "graphflow";
@@ -628,6 +757,57 @@ function installMcpToDetectedAgents(options) {
     }
     return results;
 }
+/** 从所有检测到的 agent 中移除 GraphFlow MCP 配置 */
+function uninstallMcpFromDetectedAgents(options) {
+    const profiles = buildAgentProfiles();
+    const detectedIds = new Set(detectInstalledAgents().map((agent) => agent.id));
+    const serverName = options?.serverName ?? "graphflow";
+    const targetAgentId = options?.agentId;
+    const results = [];
+    for (const profile of profiles) {
+        // 如果指定了 agent，则仅处理该 agent
+        if (targetAgentId && profile.id !== targetAgentId) {
+            continue;
+        }
+        if (!detectedIds.has(profile.id)) {
+            continue;
+        }
+        const seen = new Set();
+        for (const userTarget of profile.userTargets) {
+            const key = `${userTarget.configPath}::${userTarget.serversKey}::${userTarget.configFormat ?? "json"}`;
+            if (seen.has(key)) {
+                continue;
+            }
+            seen.add(key);
+            try {
+                let removed = false;
+                if (userTarget.configFormat === "codex-toml") {
+                    removed = removeCodexMcpEntry(userTarget.configPath, serverName);
+                }
+                else {
+                    removed = removeMcpEntry(userTarget.configPath, userTarget.serversKey, serverName);
+                }
+                results.push({
+                    agentId: profile.id,
+                    agentName: profile.name,
+                    configPath: userTarget.configPath,
+                    removed,
+                    message: removed ? "已移除" : "未找到配置（可能已移除）",
+                });
+            }
+            catch (error) {
+                results.push({
+                    agentId: profile.id,
+                    agentName: profile.name,
+                    configPath: userTarget.configPath,
+                    removed: false,
+                    message: error instanceof Error ? error.message : String(error),
+                });
+            }
+        }
+    }
+    return results;
+}
 function formatModelConfigGuide(workspaceRoot) {
     const root = workspaceRoot ?? process.cwd();
     return [