@rnacanvas/draw 12.0.1 → 12.2.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BaseNumbering.d.ts +6 -0
- package/dist/BaseNumbering.d.ts.map +1 -0
- package/dist/BaseNumberingsDrawing.d.ts +19 -0
- package/dist/BaseNumberingsDrawing.d.ts.map +1 -0
- package/dist/DotBracketDrawer.d.ts +1 -1
- package/dist/Drawing.d.ts +27 -0
- package/dist/Drawing.d.ts.map +1 -1
- package/dist/index.js +1 -1
- package/package.json +3 -2
|
@@ -0,0 +1,6 @@
|
|
|
1
|
+
import type { Nucleobase } from '@rnacanvas/draw.bases';
|
|
2
|
+
import type { BaseNumbering as GenericBaseNumbering } from '@rnacanvas/draw.bases.numberings';
|
|
3
|
+
import type { BaseNumberingLine as GenericBaseNumberingLine } from '@rnacanvas/draw.bases.numberings';
|
|
4
|
+
export type BaseNumbering = GenericBaseNumbering<Nucleobase>;
|
|
5
|
+
export type BaseNumberingLine = GenericBaseNumberingLine<Nucleobase>;
|
|
6
|
+
//# sourceMappingURL=BaseNumbering.d.ts.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"BaseNumbering.d.ts","sourceRoot":"","sources":["../src/BaseNumbering.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,uBAAuB,CAAC;AAExD,OAAO,KAAK,EAAE,aAAa,IAAI,oBAAoB,EAAE,MAAM,kCAAkC,CAAC;AAE9F,OAAO,KAAK,EAAE,iBAAiB,IAAI,wBAAwB,EAAE,MAAM,kCAAkC,CAAC;AAEtG,MAAM,MAAM,aAAa,GAAG,oBAAoB,CAAC,UAAU,CAAC,CAAC;AAE7D,MAAM,MAAM,iBAAiB,GAAG,wBAAwB,CAAC,UAAU,CAAC,CAAC"}
|
|
@@ -0,0 +1,19 @@
|
|
|
1
|
+
import type { Nucleobase } from '@rnacanvas/draw.bases';
|
|
2
|
+
import type { BaseNumbering, BaseNumberingLine } from './BaseNumbering';
|
|
3
|
+
export declare class BaseNumberingsDrawing {
|
|
4
|
+
#private;
|
|
5
|
+
readonly domNode: SVGSVGElement;
|
|
6
|
+
constructor(domNode: SVGSVGElement);
|
|
7
|
+
get baseNumberings(): BaseNumbering[];
|
|
8
|
+
set baseNumberings(baseNumberings: BaseNumbering[]);
|
|
9
|
+
number(b: Nucleobase, n: number): BaseNumbering;
|
|
10
|
+
}
|
|
11
|
+
export declare class BaseNumberingLinesDrawing {
|
|
12
|
+
#private;
|
|
13
|
+
readonly domNode: SVGSVGElement;
|
|
14
|
+
constructor(domNode: SVGSVGElement);
|
|
15
|
+
get baseNumberingLines(): BaseNumberingLine[];
|
|
16
|
+
set baseNumberingLines(baseNumberingLines: BaseNumberingLine[]);
|
|
17
|
+
connect(bn: BaseNumbering): BaseNumberingLine;
|
|
18
|
+
}
|
|
19
|
+
//# sourceMappingURL=BaseNumberingsDrawing.d.ts.map
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
{"version":3,"file":"BaseNumberingsDrawing.d.ts","sourceRoot":"","sources":["../src/BaseNumberingsDrawing.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,uBAAuB,CAAC;AAExD,OAAO,KAAK,EAAE,aAAa,EAAE,iBAAiB,EAAE,MAAM,iBAAiB,CAAC;AAMxE,qBAAa,qBAAqB;;IAGpB,QAAQ,CAAC,OAAO,EAAE,aAAa;gBAAtB,OAAO,EAAE,aAAa;IAI3C,IAAI,cAAc,oBAEjB;IAED,IAAI,cAAc,CAAC,cAAc,iBAAA,EAEhC;IAED,MAAM,CAAC,CAAC,EAAE,UAAU,EAAE,CAAC,EAAE,MAAM,GAAG,aAAa;CAShD;AAED,qBAAa,yBAAyB;;IAGxB,QAAQ,CAAC,OAAO,EAAE,aAAa;gBAAtB,OAAO,EAAE,aAAa;IAI3C,IAAI,kBAAkB,wBAErB;IAED,IAAI,kBAAkB,CAAC,kBAAkB,qBAAA,EAExC;IAED,OAAO,CAAC,EAAE,EAAE,aAAa,GAAG,iBAAiB;CAS9C"}
|
|
@@ -16,7 +16,7 @@ export declare class DotBracketDrawer {
|
|
|
16
16
|
* Currently, this method is only able to handle simple dot-bracket notation
|
|
17
17
|
* (i.e., that only contains the characters ".", "(", and ")").
|
|
18
18
|
*
|
|
19
|
-
* This method will also
|
|
19
|
+
* This method will also apply the RNAcanvas untangling algorithm to the drawn bases
|
|
20
20
|
* and add a primary bond between each consecutive pair of bases.
|
|
21
21
|
*
|
|
22
22
|
* @param seq The sequence of the structure to draw.
|
package/dist/Drawing.d.ts
CHANGED
|
@@ -1,4 +1,5 @@
|
|
|
1
1
|
import { Nucleobase } from '@rnacanvas/draw.bases';
|
|
2
|
+
import { BaseNumbering, BaseNumberingLine } from './BaseNumbering';
|
|
2
3
|
import type { BaseOutline } from './BaseOutline';
|
|
3
4
|
import { StraightBond } from '@rnacanvas/draw.bases.bonds';
|
|
4
5
|
import { PrimaryBond } from './PrimaryBondsDrawing';
|
|
@@ -216,6 +217,18 @@ export declare class Drawing {
|
|
|
216
217
|
* Returns the newly added nucleobase.
|
|
217
218
|
*/
|
|
218
219
|
addBase(textContent: string): Nucleobase;
|
|
220
|
+
/**
|
|
221
|
+
* Adds a base numbering for the specified base with the specified number.
|
|
222
|
+
*
|
|
223
|
+
* @param b
|
|
224
|
+
* @param n
|
|
225
|
+
* @returns The added base numbering and base numbering line.
|
|
226
|
+
*/
|
|
227
|
+
number(b: Nucleobase, n: number): [BaseNumbering, BaseNumberingLine];
|
|
228
|
+
get baseNumberings(): Iterable<BaseNumbering>;
|
|
229
|
+
set baseNumberings(baseNumberings: Iterable<BaseNumbering>);
|
|
230
|
+
get baseNumberingLines(): Iterable<BaseNumberingLine>;
|
|
231
|
+
set baseNumberingLines(baseNumberingLines: Iterable<BaseNumberingLine>);
|
|
219
232
|
/**
|
|
220
233
|
* The base outlines in the drawing.
|
|
221
234
|
*/
|
|
@@ -330,6 +343,20 @@ export declare class Drawing {
|
|
|
330
343
|
bases: {
|
|
331
344
|
id: string;
|
|
332
345
|
}[];
|
|
346
|
+
baseNumberings: {
|
|
347
|
+
id: string;
|
|
348
|
+
ownerID: string;
|
|
349
|
+
displacement: {
|
|
350
|
+
x: number;
|
|
351
|
+
y: number;
|
|
352
|
+
};
|
|
353
|
+
}[];
|
|
354
|
+
baseNumberingLines: {
|
|
355
|
+
id: string;
|
|
356
|
+
ownerID: string;
|
|
357
|
+
basePadding: number;
|
|
358
|
+
numberingPadding: number;
|
|
359
|
+
}[];
|
|
333
360
|
baseOutlines: {
|
|
334
361
|
id: string;
|
|
335
362
|
ownerID: string;
|
package/dist/Drawing.d.ts.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"Drawing.d.ts","sourceRoot":"","sources":["../src/Drawing.ts"],"names":[],"mappings":"AAMA,OAAO,EAAE,UAAU,EAAE,MAAM,uBAAuB,CAAC;AAInD,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAMjD,OAAO,EAAE,YAAY,EAAE,MAAM,6BAA6B,CAAC;AAE3D,OAAO,EAAuB,WAAW,EAAE,MAAM,uBAAuB,CAAC;AAEzE,OAAO,EAAyB,aAAa,EAAE,MAAM,yBAAyB,CAAC;AAQ/E;;GAEG;AACH,KAAK,UAAU,GAAG;IAChB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;CACvB,CAAC;AAEF;;GAEG;AACH,qBAAa,OAAO;;IAClB;;;;OAIG;IACH,QAAQ,CAAC,OAAO,EAAE,aAAa,CAAC;IAEhC,OAAO,CAAC,YAAY,CAAe;
|
|
1
|
+
{"version":3,"file":"Drawing.d.ts","sourceRoot":"","sources":["../src/Drawing.ts"],"names":[],"mappings":"AAMA,OAAO,EAAE,UAAU,EAAE,MAAM,uBAAuB,CAAC;AAInD,OAAO,EAAE,aAAa,EAAE,iBAAiB,EAAE,MAAM,iBAAiB,CAAC;AAQnE,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAMjD,OAAO,EAAE,YAAY,EAAE,MAAM,6BAA6B,CAAC;AAE3D,OAAO,EAAuB,WAAW,EAAE,MAAM,uBAAuB,CAAC;AAEzE,OAAO,EAAyB,aAAa,EAAE,MAAM,yBAAyB,CAAC;AAQ/E;;GAEG;AACH,KAAK,UAAU,GAAG;IAChB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;CACvB,CAAC;AAEF;;GAEG;AACH,qBAAa,OAAO;;IAClB;;;;OAIG;IACH,QAAQ,CAAC,OAAO,EAAE,aAAa,CAAC;IAEhC,OAAO,CAAC,YAAY,CAAe;IAQnC,OAAO,CAAC,mBAAmB,CAAsB;IAEjD,OAAO,CAAC,qBAAqB,CAAwB;;IAwBrD;;OAEG;IACH,IAAI,QAAQ,WAEX;IAED;;;;OAIG;IACH,IAAI,QAAQ,CAAC,QAAQ,QAAA,EAEpB;IAED;;OAEG;IACH,IAAI,QAAQ,WAEX;IAED,IAAI,QAAQ,CAAC,QAAQ,QAAA,EAEpB;IAED;;OAEG;IACH,QAAQ,CAAC,SAAS,EAAE,IAAI,GAAG,IAAI;IAI/B;;;;OAIG;IACH,MAAM,IAAI,IAAI;IAId;;;;OAIG;IACH,IAAI,IAAI,IAAI,MAAM,CAEjB;IAED;;;;;;;OAOG;IACH,IAAI,IAAI,CAAC,IAAI,EAZD,MAYC,EAaZ;IAED;;;;OAIG;IACH,IAAI,IAAI,IAAI,MAAM,CAEjB;IAED;;;;;;;OAOG;IACH,IAAI,IAAI,CAAC,IAAI,EAZD,MAYC,EAWZ;IAED;;;;OAIG;IACH,IAAI,IAAI,IAAI,MAAM,CAEjB;IAED;;;;;;;OAOG;IACH,IAAI,IAAI,CAAC,IAAI,EAZD,MAYC,EAaZ;IAED;;;;OAIG;IACH,IAAI,IAAI,IAAI,MAAM,CAEjB;IAED;;;;;;;;OAQG;IACH,IAAI,IAAI,CAAC,IAAI,EAbD,MAaC,EAWZ;IAED;;;;;OAKG;IACH,aAAa,CAAC,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,EAAE,UAAU;IAOpD;;;;;OAKG;IACH,IAAI,KAAK,IAAI,MAAM,CAElB;IAED;;;;;;;OAOG;IACH,IAAI,KAAK,CAAC,KAAK,EAZF,MAYE,EAEd;IAED;;;;;OAKG;IACH,IAAI,MAAM,IAAI,MAAM,CAEnB;IAED;;;;;;;OAOG;IACH,IAAI,MAAM,CAAC,MAAM,EAZH,MAYG,EAEhB;IAED;;;;;OAKG;IACH,IAAI,iBAAiB,IAAI,MAAM,CAK9B;IAED;;;;;OAKG;IACH,IAAI,iBAAiB,CAAC,iBAAiB,EAbd,MAac,EAItC;IAED;;;;;OAKG;IACH,IAAI,eAAe,IAAI,MAAM,CAK5B;IAED;;;;;OAKG;IACH,IAAI,eAAe,CAAC,eAAe,EAbZ,MAaY,EAIlC;IAED;;;;OAIG;IACH,UAAU,CAAC,OAAO,EAAE,MAAM;IAK1B;;;;OAIG;IACH,IAAI,uBAAuB,IAAI,MAAM,CAEpC;IAED;;;;OAIG;IACH,IAAI,qBAAqB,IAAI,MAAM,CAElC;IAED;;;;OAIG;IACH,IAAI,KAAK,IAAI,QAAQ,CAAC,UAAU,CAAC,CAEhC;IAED,IAAI,KAAK,CAAC,KAAK,EAJF,QAAQ,CAAC,UAAU,CAIjB,EAEd;IAED;;;OAGG;IACH,UAAU,CAAC,CAAC,EAAE,UAAU,GAAG,IAAI;IAI/B;;;;OAIG;IACH,OAAO,CAAC,WAAW,EAAE,MAAM,GAAG,UAAU;IAYxC;;;;;;OAMG;IACH,MAAM,CAAC,CAAC,EAAE,UAAU,EAAE,CAAC,EAAE,MAAM,GAAG,CAAC,aAAa,EAAE,iBAAiB,CAAC;IAapE,IAAI,cAAc,IAAI,QAAQ,CAAC,aAAa,CAAC,CAE5C;IAED,IAAI,cAAc,CAAC,cAAc,EAJX,QAAQ,CAAC,aAAa,CAIX,EAEhC;IAED,IAAI,kBAAkB,IAAI,QAAQ,CAAC,iBAAiB,CAAC,CAEpD;IAED,IAAI,kBAAkB,CAAC,kBAAkB,EAJf,QAAQ,CAAC,iBAAiB,CAIX,EAExC;IAED;;OAEG;IACH,IAAI,YAAY,IAAI,QAAQ,CAAC,WAAW,CAAC,CAExC;IAED,IAAI,YAAY,CAAC,YAAY,EAJT,QAAQ,CAAC,WAAW,CAIX,EAE5B;IAED;;;OAGG;IACH,WAAW,CAAC,CAAC,EAAE,UAAU,GAAG,WAAW;IAIvC,iBAAiB,CAAC,EAAE,EAAE,WAAW;IAIjC;;;;;;;OAOG;IACH,IAAI,YAAY,IAAI,QAAQ,CAAC,WAAW,CAAC,CAExC;IAED,IAAI,YAAY,CAAC,YAAY,EAJT,QAAQ,CAAC,WAAW,CAIX,EAE5B;IAED;;;OAGG;IACH,iBAAiB,CAAC,EAAE,EAAE,WAAW,GAAG,IAAI;IAIxC;;;;OAIG;IACH,cAAc,CAAC,KAAK,EAAE,UAAU,EAAE,KAAK,EAAE,UAAU,GAAG,WAAW;IAIjE;;;;;;;OAOG;IACH,IAAI,cAAc,IAAI,QAAQ,CAAC,aAAa,CAAC,CAE5C;IAED,IAAI,cAAc,CAAC,cAAc,EAJX,QAAQ,CAAC,aAAa,CAIX,EAEhC;IAED;;;OAGG;IACH,mBAAmB,CAAC,EAAE,EAAE,YAAY,CAAC,UAAU,CAAC,GAAG,IAAI;IAIvD;;;;OAIG;IACH,gBAAgB,CAAC,KAAK,EAAE,UAAU,EAAE,KAAK,EAAE,UAAU,GAAG,aAAa;IAIrE;;OAEG;IACH,IAAI,aAAa;;;;;;;;;;;;;;;;;MAWhB;IAED;;;;;;;;;;;OAWG;IACH,IAAI,WAAW,IAAI;QAAE,CAAC,EAAE,MAAM,CAAC;QAAC,CAAC,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,CAAA;KAAE,CAEzE;IAED;;;;;OAKG;IACH,UAAU,CAAC,OAAO,EAAE,MAAM,GAAG,IAAI;IAWjC;;OAEG;IACH,KAAK,IAAI,IAAI;IAkBb;;;;;OAKG;IACH,UAAU;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;IAYV;;;;;;OAMG;IACH,MAAM,CAAC,YAAY,CAAC,YAAY,EAAE,OAAO,GAAG,OAAO,GAAG,KAAK;IAmD3D;;;;;;;;OAQG;IACH,OAAO,CAAC,aAAa,EAAE,OAAO,GAAG,IAAI,GAAG,KAAK;CA+B9C"}
|