@rnacanvas/app-object 1.0.0 → 1.1.0

package/dist/RNAcanvas.d.ts

@@ -0,0 +1,26 @@
+import { Drawing } from '@rnacanvas/draw';
+/**
+ * An RNAcanvas app object that can be included as a component of a web page / app.
+ */
+export declare class RNAcanvas {
+    /**
+     * The actual DOM node of the RNAcanvas app object.
+     *
+     * Contains the entirety of the RNAcanvas app.
+     */
+    readonly domNode: HTMLElement;
+    /**
+     * Meant to fill up the space of the DOM node of the app object
+     * and for other components of the app object to be positioned relative to it.
+     *
+     * The purpose of separating the bounding box from the outermost DOM node of the app object
+     * is so that styles applied to the outermost DOM node do not affect the bounding box.
+     */
+    private boundingBox;
+    /**
+     * The 2D nucleic acid structure drawing of the app object.
+     */
+    readonly drawing: Drawing;
+    constructor();
+}
+//# sourceMappingURL=RNAcanvas.d.ts.map

package/dist/RNAcanvas.d.ts.map

@@ -0,0 +1 @@
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package/dist/index.d.ts

@@ -1 +1,3 @@
+import { RNAcanvas } from './RNAcanvas';
+export { RNAcanvas };
 //# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

@@ -1 +1 @@
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package/dist/index.js

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this.animate(0,t)}duration(){return this._times*(this._wait+this._duration)-this._wait}during(t){return this.queue(null,t)}ease(t){return this._stepper=new Ht(t),this}element(t){return null==t?this._element:(this._element=t,t._prepareRunner(),this)}finish(){return this.step(1/0)}loop(t,e,n){return"object"==typeof t&&(e=t.swing,n=t.wait,t=t.times),this._times=t||1/0,this._swing=e||!1,this._wait=n||0,!0===this._times&&(this._times=1/0),this}loops(t){const e=this._duration+this._wait;if(null==t){const t=Math.floor(this._time/e),n=(this._time-t*e)/this._duration;return Math.min(t+n,this._times)}const n=t%1,r=e*Math.floor(t)+this._duration*n;return this.time(r)}persist(t){return null==t?this._persist:(this._persist=t,this)}position(t){const e=this._time,n=this._duration,r=this._wait,i=this._times,s=this._swing,o=this._reverse;let h;if(null==t){const t=function(t){const e=s*Math.floor(t%(2*(r+n))/(r+n)),i=e&&!o||!e&&o,h=Math.pow(-1,i)*(t%(r+n))/n+i;return 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n=0,r=this._queue.length;n<r;++n){const r=this._queue[n],i=r.runner.call(this,t);r.finished=r.finished||!0===i,e=e&&r.finished}return e}_tryRetarget(t,e,n){if(this._history[t]){if(!this._history[t].caller.initialised){const e=this._queue.indexOf(this._history[t].caller);return this._queue.splice(e,1),!1}this._history[t].caller.retarget?this._history[t].caller.retarget.call(this,e,n):this._history[t].morpher.to(e),this._history[t].caller.finished=!1;const r=this.timeline();return r&&r.play(),!0}return!1}}Me.id=0;class Oe{constructor(t=new W,e=-1,n=!0){this.transforms=t,this.id=e,this.done=n}clearTransformsFromQueue(){}}C([Me,Oe],{mergeWith(t){return new Oe(t.transforms.lmultiply(this.transforms),t.id)}});const Ae=(t,e)=>t.lmultiplyO(e),Se=t=>t.transforms;function Ne(){const t=this._transformationRunners.runners.map(Se).reduce(Ae,new W);this.transform(t),this._transformationRunners.merge(),1===this._transformationRunners.length()&&(this._frameId=null)}class 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n=Object.keys(e),o=(h=s,n.filter((t=>!h.includes(t))));var h;if(o.length){const e=this.element()[t](o),n=new ce(i.from()).valueOf();Object.assign(n,e),i.from(n)}const u=new ce(i.to()).valueOf();Object.assign(u,e),i.to(u),s=n,r=e})),this._rememberMorpher(t,i),this},zoom(t,e){if(this._tryRetarget("zoom",t,e))return this;let n=new he(this._stepper).to(new pt(t));return this.queue((function(){n=n.from(this.element().zoom())}),(function(t){return this.element().zoom(n.at(t),e),n.done()}),(function(t,r){e=r,n.to(t)})),this._rememberMorpher("zoom",n),this},transform(t,e,n){if(e=t.relative||e,this._isDeclarative&&!e&&this._tryRetarget("transform",t))return this;const r=W.isMatrixLike(t);n=null!=t.affine?t.affine:null!=n?n:!r;const i=new he(this._stepper).type(n?ae:W);let s,o,h,u,a;return this.queue((function(){o=o||this.element(),s=s||f(t,o),a=new W(e?void 0:o),o._addRunner(this),e||o._clearTransformRunnersBefore(this)}),(function(l){e||this.clearTransform();const{x:c,y:f}=new 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this.queue((function(){r=this.element()[t](),n.from(r),n.to(r+e)}),(function(e){return this.element()[t](n.at(e)),n.done()}),(function(t){n.to(r+new pt(t))})),this._rememberMorpher(t,n),this},_queueObject(t,e){if(this._tryRetarget(t,e))return this;const n=new he(this._stepper).to(e);return this.queue((function(){n.from(this.element()[t]())}),(function(e){return this.element()[t](n.at(e)),n.done()})),this._rememberMorpher(t,n),this},_queueNumber(t,e){return this._queueObject(t,new pt(e))},cx(t){return this._queueNumber("cx",t)},cy(t){return this._queueNumber("cy",t)},move(t,e){return this.x(t).y(e)},center(t,e){return this.cx(t).cy(e)},size(t,e){let n;return t&&e||(n=this._element.bbox()),t||(t=n.width/n.height*e),e||(e=n.height/n.width*t),this.width(t).height(e)},width(t){return this._queueNumber("width",t)},height(t){return this._queueNumber("height",t)},plot(t,e,n,r){if(4===arguments.length)return this.plot([t,e,n,r]);if(this._tryRetarget("plot",t))return this;const i=new he(this._stepper).type(this._element.MorphArray).to(t);return this.queue((function(){i.from(this._element.array())}),(function(t){return this._element.plot(i.at(t)),i.done()})),this._rememberMorpher("plot",i),this},leading(t){return this._queueNumber("leading",t)},viewbox(t,e,n,r){return this._queueObject("viewbox",new K(t,e,n,r))},update(t){return"object"!=typeof t?this.update({offset:arguments[0],color:arguments[1],opacity:arguments[2]}):(null!=t.opacity&&this.attr("stop-opacity",t.opacity),null!=t.color&&this.attr("stop-color",t.color),null!=t.offset&&this.attr("offset",t.offset),this)}}),C(Me,{rx:vt,ry:Mt,from:Dt,to:Pt}),A(Me,"Runner");class Ce extends _t{constructor(t,e=t){super(v("svg",t),e),this.namespace()}defs(){return this.isRoot()?M(this.node.querySelector("defs"))||this.put(new xt):this.root().defs()}isRoot(){return!this.node.parentNode||!(this.node.parentNode instanceof y.window.SVGElement)&&"#document-fragment"!==this.node.parentNode.nodeName}namespace(){return 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pt(t.leading||1.3),this}text(t){if(void 0===t){const e=this.node.childNodes;let n=0;t="";for(let r=0,i=e.length;r<i;++r)"textPath"!==e[r].nodeName?(r!==n&&3!==e[r].nodeType&&!0===M(e[r]).dom.newLined&&(t+="\n"),t+=e[r].textContent):0===r&&(n=1);return t}if(this.clear().build(!0),"function"==typeof t)t.call(this,this);else for(let e=0,n=(t=(t+"").split("\n")).length;e<n;e++)this.newLine(t[e]);return this.build(!1).rebuild()}}C(Ee,je),i({Container:{text:k((function(t=""){return this.put(new Ee).text(t)})),plain:k((function(t=""){return this.put(new Ee).plain(t)}))}}),A(Ee,"Text");class De extends bt{constructor(t,e=t){super(v("tspan",t),e),this._build=!1}dx(t){return this.attr("dx",t)}dy(t){return this.attr("dy",t)}newLine(){this.dom.newLined=!0;const t=this.parent();if(!(t instanceof Ee))return this;const e=t.index(this),n=y.window.getComputedStyle(this.node).getPropertyValue("font-size"),r=t.dom.leading*new pt(n);return this.dy(e?r:0).attr("x",t.x())}text(t){return 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pt(t.leading||1.3),this}text(t){if(void 0===t){const e=this.node.childNodes;let n=0;t="";for(let r=0,i=e.length;r<i;++r)"textPath"!==e[r].nodeName?(r!==n&&3!==e[r].nodeType&&!0===M(e[r]).dom.newLined&&(t+="\n"),t+=e[r].textContent):0===r&&(n=1);return t}if(this.clear().build(!0),"function"==typeof t)t.call(this,this);else for(let e=0,n=(t=(t+"").split("\n")).length;e<n;e++)this.newLine(t[e]);return this.build(!1).rebuild()}}C(Ee,je),i({Container:{text:k((function(t=""){return this.put(new Ee).text(t)})),plain:k((function(t=""){return this.put(new Ee).plain(t)}))}}),A(Ee,"Text");class De extends bt{constructor(t,e=t){super(v("tspan",t),e),this._build=!1}dx(t){return this.attr("dx",t)}dy(t){return this.attr("dy",t)}newLine(){this.dom.newLined=!0;const t=this.parent();if(!(t instanceof Ee))return this;const e=t.index(this),n=y.window.getComputedStyle(this.node).getPropertyValue("font-size"),r=t.dom.leading*new pt(n);return this.dy(e?r:0).attr("x",t.x())}text(t){return null==t?this.node.textContent+(this.dom.newLined?"\n":""):("function"==typeof t?(this.clear().build(!0),t.call(this,this),this.build(!1)):this.plain(t),this)}}C(De,je),i({Tspan:{tspan:k((function(t=""){const e=new De;return this._build||this.clear(),this.put(e).text(t)}))},Text:{newLine:function(t=""){return this.tspan(t).newLine()}}}),A(De,"Tspan");class Pe extends bt{constructor(t,e=t){super(v("circle",t),e)}radius(t){return this.attr("r",t)}rx(t){return this.attr("r",t)}ry(t){return this.rx(t)}size(t){return this.radius(new pt(t).divide(2))}}C(Pe,{x:Ot,y:At,cx:St,cy:Nt,width:Tt,height:Ct}),i({Container:{circle:k((function(t=0){return this.put(new Pe).size(t).move(0,0)}))}}),A(Pe,"Circle");class Ie extends _t{constructor(t,e=t){super(v("clipPath",t),e)}remove(){return this.targets().forEach((function(t){t.unclip()})),super.remove()}targets(){return rt("svg [clip-path*="+this.id()+"]")}}i({Container:{clip:k((function(){return this.defs().put(new Ie)}))},Element:{clipper(){return this.reference("clip-path")},clipWith(t){const e=t instanceof Ie?t:this.parent().clip().add(t);return this.attr("clip-path","url(#"+e.id()+")")},unclip(){return this.attr("clip-path",null)}}}),A(Ie,"ClipPath");class Re extends gt{constructor(t,e=t){super(v("foreignObject",t),e)}}i({Container:{foreignObject:k((function(t,e){return this.put(new Re).size(t,e)}))}}),A(Re,"ForeignObject");var ze={__proto__:null,dmove:function(t,e){return this.children().forEach(((n,r)=>{let i;try{i=n.bbox()}catch(t){return}const s=new W(n),o=s.translate(t,e).transform(s.inverse()),h=new $(i.x,i.y).transform(o);n.move(h.x,h.y)})),this},dx:function(t){return this.dmove(t,0)},dy:function(t){return this.dmove(0,t)},height:function(t,e=this.bbox()){return null==t?e.height:this.size(e.width,t,e)},move:function(t=0,e=0,n=this.bbox()){const r=t-n.x,i=e-n.y;return this.dmove(r,i)},size:function(t,e,n=this.bbox()){const r=c(this,t,e,n),i=r.width/n.width,s=r.height/n.height;return this.children().forEach(((t,e)=>{const r=new $(n).transform(new W(t).inverse());t.scale(i,s,r.x,r.y)})),this},width:function(t,e=this.bbox()){return null==t?e.width:this.size(t,e.height,e)},x:function(t,e=this.bbox()){return null==t?e.x:this.move(t,e.y,e)},y:function(t,e=this.bbox()){return null==t?e.y:this.move(e.x,t,e)}};class Le extends _t{constructor(t,e=t){super(v("g",t),e)}}C(Le,ze),i({Container:{group:k((function(){return this.put(new Le)}))}}),A(Le,"G");class Fe extends _t{constructor(t,e=t){super(v("a",t),e)}target(t){return this.attr("target",t)}to(t){return this.attr("href",t,m)}}C(Fe,ze),i({Container:{link:k((function(t){return this.put(new Fe).to(t)}))},Element:{unlink(){const t=this.linker();if(!t)return this;const e=t.parent();if(!e)return this.remove();const n=e.index(t);return e.add(this,n),t.remove(),this},linkTo(t){let e=this.linker();return e||(e=new Fe,this.wrap(e)),"function"==typeof t?t.call(e,e):e.to(t),this},linker(){const t=this.parent();return t&&"a"===t.node.nodeName.toLowerCase()?t:null}}}),A(Fe,"A");class qe extends _t{constructor(t,e=t){super(v("mask",t),e)}remove(){return this.targets().forEach((function(t){t.unmask()})),super.remove()}targets(){return rt("svg [mask*="+this.id()+"]")}}i({Container:{mask:k((function(){return this.defs().put(new qe)}))},Element:{masker(){return this.reference("mask")},maskWith(t){const e=t instanceof qe?t:this.parent().mask().add(t);return this.attr("mask","url(#"+e.id()+")")},unmask(){return this.attr("mask",null)}}}),A(qe,"Mask");class Be extends gt{constructor(t,e=t){super(v("stop",t),e)}update(t){return("number"==typeof t||t instanceof pt)&&(t={offset:arguments[0],color:arguments[1],opacity:arguments[2]}),null!=t.opacity&&this.attr("stop-opacity",t.opacity),null!=t.color&&this.attr("stop-color",t.color),null!=t.offset&&this.attr("offset",new pt(t.offset)),this}}i({Gradient:{stop:function(t,e,n){return this.put(new Be).update(t,e,n)}}}),A(Be,"Stop");class Ve extends gt{constructor(t,e=t){super(v("style",t),e)}addText(t=""){return this.node.textContent+=t,this}font(t,e,n={}){return this.rule("@font-face",{fontFamily:t,src:e,...n})}rule(t,e){return this.addText(function(t,e){if(!t)return"";if(!e)return t;let n=t+"{";for(const t in e)n+=t.replace(/([A-Z])/g,(function(t,e){return"-"+e.toLowerCase()}))+":"+e[t]+";";return n+="}",n}(t,e))}}i("Dom",{style(t,e){return this.put(new Ve).rule(t,e)},fontface(t,e,n){return this.put(new Ve).font(t,e,n)}}),A(Ve,"Style");class Xe extends Ee{constructor(t,e=t){super(v("textPath",t),e)}array(){const t=this.track();return t?t.array():null}plot(t){const e=this.track();let n=null;return e&&(n=e.plot(t)),null==t?n:this}track(){return this.reference("href")}}i({Container:{textPath:k((function(t,e){return t instanceof Ee||(t=this.text(t)),t.path(e)}))},Text:{path:k((function(t,e=!0){const n=new Xe;let r;if(t instanceof de||(t=this.defs().path(t)),n.attr("href","#"+t,m),e)for(;r=this.node.firstChild;)n.node.appendChild(r);return this.put(n)})),textPath(){return this.findOne("textPath")}},Path:{text:k((function(t){return t instanceof Ee||(t=(new Ee).addTo(this.parent()).text(t)),t.path(this)})),targets(){return rt("svg textPath").filter((t=>(t.attr("href")||"").includes(this.id())))}}}),Xe.prototype.MorphArray=se,A(Xe,"TextPath");class Ye extends bt{constructor(t,e=t){super(v("use",t),e)}use(t,e){return this.attr("href",(e||"")+"#"+t,m)}}i({Container:{use:k((function(t,e){return this.put(new Ye).use(t,e)}))}}),A(Ye,"Use"),C([Ce,ke,Ft,Lt,Xt],s("viewbox")),C([Vt,ye,me,de],s("marker")),C(Ee,s("Text")),C(de,s("Path")),C(xt,s("Defs")),C([Ee,De],s("Tspan")),C([ge,jt,zt,Me],s("radius")),C(lt,s("EventTarget")),C(yt,s("Dom")),C(gt,s("Element")),C(bt,s("Shape")),C([_t,Et],s("Container")),C(zt,s("Gradient")),C(Me,s("Runner")),et.extend([...new Set(e)]),function(t=[]){fe.push(...[].concat(t))}([pt,H,K,W,dt,qt,se,$]),C(fe,{to(t){return(new he).type(this.constructor).from(this.toArray()).to(t)},fromArray(t){return this.init(t),this},toConsumable(){return this.toArray()},morph(t,e,n,r,i){return this.fromArray(t.map((function(t,s){return r.step(t,e[s],n,i[s],i)})))}});var Ue=n(726),Ge=function(){function t(){this.domNode=(new Ce).node,this.allBasesSorted=[],this.allPrimaryBonds=[],this.allSecondaryBonds=[]}return t.prototype.appendTo=function(t){t.appendChild(this.domNode)},t.prototype.remove=function(){this.domNode.remove()},t.prototype.setScaling=function(t){new Ue.Scaling(this.domNode).set(t)},Object.defineProperty(t.prototype,"horizontalClientScaling",{get:function(){return new Ue.HorizontalClientScaling(this.domNode).get()},enumerable:!1,configurable:!0}),Object.defineProperty(t.prototype,"verticalClientScaling",{get:function(){return new Ue.VerticalClientScaling(this.domNode).get()},enumerable:!1,configurable:!0}),t.prototype.appendBase=function(t){t.appendTo(this.domNode),this.allBasesSorted.push(t)},t.prototype.appendPrimaryBond=function(t){t.appendTo(this.domNode),this.allPrimaryBonds.push(t)},t.prototype.appendSecondaryBond=function(t){t.appendTo(this.domNode),this.allSecondaryBonds.push(t)},t}(),He=n(358),$e=n(298)})(),r})(),t.exports=e()}},e={};function n(r){var i=e[r];if(void 0!==i)return i.exports;var s=e[r]={exports:{}};return t[r].call(s.exports,s,s.exports,n),s.exports}n.d=(t,e)=>{for(var r in e)n.o(e,r)&&!n.o(t,r)&&Object.defineProperty(t,r,{enumerable:!0,get:e[r]})},n.o=(t,e)=>Object.prototype.hasOwnProperty.call(t,e),n.r=t=>{"undefined"!=typeof Symbol&&Symbol.toStringTag&&Object.defineProperty(t,Symbol.toStringTag,{value:"Module"}),Object.defineProperty(t,"__esModule",{value:!0})};var r={};return(()=>{"use strict";n.r(r),n.d(r,{RNAcanvas:()=>e});var t=n(662);class e{constructor(){this.domNode=document.createElement("div"),this.boundingBox=document.createElement("div"),this.domNode.appendChild(this.boundingBox),this.boundingBox.style.width="100%",this.boundingBox.style.height="100%",this.boundingBox.style.overflow="auto",this.boundingBox.style.position="relative",this.drawing=new t.Drawing,this.drawing.appendTo(this.boundingBox)}}})(),r})()));

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@rnacanvas/app-object",
-  "version": "1.0.0",
+  "version": "1.1.0",
   "description": "The RNAcanvas app object",
   "repository": {
     "type": "git",
@@ -17,11 +17,17 @@
     "@babel/core": "^7.23.7",
     "@babel/preset-env": "^7.23.7",
     "@babel/preset-typescript": "^7.23.3",
+    "@types/jquery": "^3.5.29",
     "babel-jest": "^29.7.0",
     "jest": "^29.7.0",
+    "jest-environment-jsdom": "^29.7.0",
     "ts-loader": "^9.5.1",
     "typescript": "^5.3.3",
     "webpack": "^5.89.0",
     "webpack-cli": "^5.1.4"
+  },
+  "dependencies": {
+    "@rnacanvas/draw": "^2.4.0",
+    "jquery": "^3.7.1"
   }
 }