@researai/deepscientist 1.5.17 → 1.6.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (894) hide show
  1. package/AGENTS.md +309 -130
  2. package/AISB/catalog/aisb.b1.agentic_coding.yaml +244 -0
  3. package/AISB/catalog/aisb.b10.climate_earth.yaml +235 -0
  4. package/AISB/catalog/aisb.b11.model_efficiency.yaml +231 -0
  5. package/AISB/catalog/aisb.b12.embodied_ai.yaml +238 -0
  6. package/AISB/catalog/aisb.b2.agent_systems.yaml +229 -0
  7. package/AISB/catalog/aisb.b3.self_evolving_rl.yaml +237 -0
  8. package/AISB/catalog/aisb.b4.lm_reasoning.yaml +240 -0
  9. package/AISB/catalog/aisb.b5.math_proof.yaml +235 -0
  10. package/AISB/catalog/aisb.b6.research_process.yaml +243 -0
  11. package/AISB/catalog/aisb.b7.multimodal_fusion.yaml +232 -0
  12. package/AISB/catalog/aisb.b8.lifesci_drug.yaml +275 -0
  13. package/AISB/catalog/aisb.b9.material_science.yaml +237 -0
  14. package/AISB/catalog/aisb.t3.001_savvy.yaml +159 -0
  15. package/AISB/catalog/aisb.t3.001_savvy.zh.yaml +121 -0
  16. package/AISB/catalog/aisb.t3.002_pinet.yaml +189 -0
  17. package/AISB/catalog/aisb.t3.002_pinet.zh.yaml +130 -0
  18. package/AISB/catalog/aisb.t3.004_decentralattn.yaml +184 -0
  19. package/AISB/catalog/aisb.t3.004_decentralattn.zh.yaml +153 -0
  20. package/AISB/catalog/aisb.t3.005_tsae.yaml +193 -0
  21. package/AISB/catalog/aisb.t3.005_tsae.zh.yaml +139 -0
  22. package/AISB/catalog/aisb.t3.006_physense.yaml +194 -0
  23. package/AISB/catalog/aisb.t3.006_physense.zh.yaml +118 -0
  24. package/AISB/catalog/aisb.t3.007_reasoningiqa.yaml +169 -0
  25. package/AISB/catalog/aisb.t3.007_reasoningiqa.zh.yaml +133 -0
  26. package/AISB/catalog/aisb.t3.008_meanflows.yaml +188 -0
  27. package/AISB/catalog/aisb.t3.008_meanflows.zh.yaml +140 -0
  28. package/AISB/catalog/aisb.t3.009_scoremissing.yaml +179 -0
  29. package/AISB/catalog/aisb.t3.009_scoremissing.zh.yaml +119 -0
  30. package/AISB/catalog/aisb.t3.010_suitabilityfilter.yaml +221 -0
  31. package/AISB/catalog/aisb.t3.010_suitabilityfilter.zh.yaml +141 -0
  32. package/AISB/catalog/aisb.t3.011_osd.yaml +206 -0
  33. package/AISB/catalog/aisb.t3.011_osd.zh.yaml +163 -0
  34. package/AISB/catalog/aisb.t3.012_efficientqat.yaml +206 -0
  35. package/AISB/catalog/aisb.t3.012_efficientqat.zh.yaml +159 -0
  36. package/AISB/catalog/aisb.t3.013_appl.yaml +152 -0
  37. package/AISB/catalog/aisb.t3.013_appl.zh.yaml +126 -0
  38. package/AISB/catalog/aisb.t3.014_piguard.yaml +207 -0
  39. package/AISB/catalog/aisb.t3.014_piguard.zh.yaml +164 -0
  40. package/AISB/catalog/aisb.t3.015_frspec.yaml +209 -0
  41. package/AISB/catalog/aisb.t3.015_frspec.zh.yaml +163 -0
  42. package/AISB/catalog/aisb.t3.016_mathfusion.yaml +166 -0
  43. package/AISB/catalog/aisb.t3.016_mathfusion.zh.yaml +145 -0
  44. package/AISB/catalog/aisb.t3.017_multimodalglp.yaml +171 -0
  45. package/AISB/catalog/aisb.t3.017_multimodalglp.zh.yaml +122 -0
  46. package/AISB/catalog/aisb.t3.018_cotsynth.yaml +206 -0
  47. package/AISB/catalog/aisb.t3.018_cotsynth.zh.yaml +162 -0
  48. package/AISB/catalog/aisb.t3.019_dyscaleut.yaml +211 -0
  49. package/AISB/catalog/aisb.t3.019_dyscaleut.zh.yaml +148 -0
  50. package/AISB/catalog/aisb.t3.020_aristotle.yaml +173 -0
  51. package/AISB/catalog/aisb.t3.020_aristotle.zh.yaml +119 -0
  52. package/AISB/catalog/aisb.t3.021_tokenrecycling.yaml +160 -0
  53. package/AISB/catalog/aisb.t3.021_tokenrecycling.zh.yaml +129 -0
  54. package/AISB/catalog/aisb.t3.022_chainofreasoning.yaml +204 -0
  55. package/AISB/catalog/aisb.t3.022_chainofreasoning.zh.yaml +161 -0
  56. package/AISB/catalog/aisb.t3.023_guidedembed.yaml +211 -0
  57. package/AISB/catalog/aisb.t3.023_guidedembed.zh.yaml +189 -0
  58. package/AISB/catalog/aisb.t3.024_outputcentric.yaml +148 -0
  59. package/AISB/catalog/aisb.t3.024_outputcentric.zh.yaml +131 -0
  60. package/AISB/catalog/aisb.t3.025_deeper.yaml +143 -0
  61. package/AISB/catalog/aisb.t3.025_deeper.zh.yaml +116 -0
  62. package/AISB/catalog/aisb.t3.026_gartkg.yaml +195 -0
  63. package/AISB/catalog/aisb.t3.026_gartkg.zh.yaml +127 -0
  64. package/AISB/catalog/aisb.t3.027_citeeval.yaml +182 -0
  65. package/AISB/catalog/aisb.t3.027_citeeval.zh.yaml +135 -0
  66. package/AISB/catalog/aisb.t3.028_sbam.yaml +206 -0
  67. package/AISB/catalog/aisb.t3.028_sbam.zh.yaml +166 -0
  68. package/AISB/catalog/aisb.t3.029_cdqgeoembed.yaml +224 -0
  69. package/AISB/catalog/aisb.t3.029_cdqgeoembed.zh.yaml +142 -0
  70. package/AISB/catalog/aisb.t3.030_processrm.yaml +211 -0
  71. package/AISB/catalog/aisb.t3.030_processrm.zh.yaml +166 -0
  72. package/AISB/catalog/aisb.t3.031_circuitstability.yaml +172 -0
  73. package/AISB/catalog/aisb.t3.031_circuitstability.zh.yaml +134 -0
  74. package/AISB/catalog/aisb.t3.032_ptsolver.yaml +169 -0
  75. package/AISB/catalog/aisb.t3.032_ptsolver.zh.yaml +135 -0
  76. package/AISB/catalog/aisb.t3.033_gcse.yaml +144 -0
  77. package/AISB/catalog/aisb.t3.033_gcse.zh.yaml +126 -0
  78. package/AISB/catalog/aisb.t3.034_ensemblewm.yaml +183 -0
  79. package/AISB/catalog/aisb.t3.034_ensemblewm.zh.yaml +146 -0
  80. package/AISB/catalog/aisb.t3.035_moralvalueswa.yaml +207 -0
  81. package/AISB/catalog/aisb.t3.035_moralvalueswa.zh.yaml +165 -0
  82. package/AISB/catalog/aisb.t3.036_weakstrongpref.yaml +210 -0
  83. package/AISB/catalog/aisb.t3.036_weakstrongpref.zh.yaml +194 -0
  84. package/AISB/catalog/aisb.t3.037_dementiamask.yaml +172 -0
  85. package/AISB/catalog/aisb.t3.037_dementiamask.zh.yaml +132 -0
  86. package/AISB/catalog/aisb.t3.038_tinysam.yaml +284 -0
  87. package/AISB/catalog/aisb.t3.038_tinysam.zh.yaml +240 -0
  88. package/AISB/catalog/aisb.t3.039_calf.yaml +224 -0
  89. package/AISB/catalog/aisb.t3.039_calf.zh.yaml +194 -0
  90. package/AISB/catalog/aisb.t3.040_graniteguardian.yaml +199 -0
  91. package/AISB/catalog/aisb.t3.040_graniteguardian.zh.yaml +174 -0
  92. package/AISB/catalog/aisb.t3.041_amdm.yaml +149 -0
  93. package/AISB/catalog/aisb.t3.041_amdm.zh.yaml +137 -0
  94. package/AISB/catalog/aisb.t3.042_xpatch.yaml +216 -0
  95. package/AISB/catalog/aisb.t3.042_xpatch.zh.yaml +182 -0
  96. package/AISB/catalog/aisb.t3.043_vhm.yaml +268 -0
  97. package/AISB/catalog/aisb.t3.043_vhm.zh.yaml +193 -0
  98. package/AISB/catalog/aisb.t3.044_rgvi.yaml +224 -0
  99. package/AISB/catalog/aisb.t3.044_rgvi.zh.yaml +176 -0
  100. package/AISB/catalog/aisb.t3.045_pslstm.yaml +203 -0
  101. package/AISB/catalog/aisb.t3.045_pslstm.zh.yaml +179 -0
  102. package/AISB/catalog/aisb.t3.046_nonstatts.yaml +208 -0
  103. package/AISB/catalog/aisb.t3.046_nonstatts.zh.yaml +194 -0
  104. package/AISB/catalog/aisb.t3.047_timepfn.yaml +156 -0
  105. package/AISB/catalog/aisb.t3.047_timepfn.zh.yaml +124 -0
  106. package/AISB/catalog/aisb.t3.048_proxyspex.yaml +148 -0
  107. package/AISB/catalog/aisb.t3.048_proxyspex.zh.yaml +125 -0
  108. package/AISB/catalog/aisb.t3.049_hogwildinference.yaml +183 -0
  109. package/AISB/catalog/aisb.t3.049_hogwildinference.zh.yaml +138 -0
  110. package/AISB/catalog/aisb.t3.050_causalpfn.yaml +214 -0
  111. package/AISB/catalog/aisb.t3.050_causalpfn.zh.yaml +190 -0
  112. package/AISB/catalog/aisb.t3.051_flashtp.yaml +169 -0
  113. package/AISB/catalog/aisb.t3.051_flashtp.zh.yaml +124 -0
  114. package/AISB/catalog/aisb.t3.052_nsdiff.yaml +155 -0
  115. package/AISB/catalog/aisb.t3.052_nsdiff.zh.yaml +138 -0
  116. package/AISB/catalog/aisb.t3.053_k2vae.yaml +158 -0
  117. package/AISB/catalog/aisb.t3.053_k2vae.zh.yaml +132 -0
  118. package/AISB/catalog/aisb.t3.054_timebase.yaml +178 -0
  119. package/AISB/catalog/aisb.t3.054_timebase.zh.yaml +158 -0
  120. package/AISB/catalog/aisb.t3.055_csbrain.yaml +238 -0
  121. package/AISB/catalog/aisb.t3.055_csbrain.zh.yaml +184 -0
  122. package/AISB/catalog/aisb.t3.056_infosam.yaml +224 -0
  123. package/AISB/catalog/aisb.t3.056_infosam.zh.yaml +189 -0
  124. package/AISB/catalog/aisb.t3.057_mdreid.yaml +129 -0
  125. package/AISB/catalog/aisb.t3.057_mdreid.zh.yaml +117 -0
  126. package/AISB/catalog/aisb.t3.058_mindglitch.yaml +171 -0
  127. package/AISB/catalog/aisb.t3.058_mindglitch.zh.yaml +145 -0
  128. package/AISB/catalog/aisb.t3.059_selfsupervised.yaml +154 -0
  129. package/AISB/catalog/aisb.t3.059_selfsupervised.zh.yaml +125 -0
  130. package/AISB/catalog/aisb.t3.060_iaggad.yaml +121 -0
  131. package/AISB/catalog/aisb.t3.060_iaggad.zh.yaml +100 -0
  132. package/AISB/catalog/aisb.t3.061_hsgkn.yaml +136 -0
  133. package/AISB/catalog/aisb.t3.061_hsgkn.zh.yaml +113 -0
  134. package/AISB/catalog/aisb.t3.062_visionts.yaml +237 -0
  135. package/AISB/catalog/aisb.t3.062_visionts.zh.yaml +216 -0
  136. package/AISB/catalog/aisb.t3.063_tsrag.yaml +162 -0
  137. package/AISB/catalog/aisb.t3.063_tsrag.zh.yaml +138 -0
  138. package/AISB/catalog/aisb.t3.064_pir.yaml +221 -0
  139. package/AISB/catalog/aisb.t3.064_pir.zh.yaml +197 -0
  140. package/AISB/catalog/aisb.t3.065_proteinbinding.yaml +234 -0
  141. package/AISB/catalog/aisb.t3.065_proteinbinding.zh.yaml +167 -0
  142. package/AISB/catalog/aisb.t3.066_tropicalattention.yaml +267 -0
  143. package/AISB/catalog/aisb.t3.066_tropicalattention.zh.yaml +229 -0
  144. package/AISB/catalog/aisb.t3.067_kanad.yaml +193 -0
  145. package/AISB/catalog/aisb.t3.067_kanad.zh.yaml +167 -0
  146. package/AISB/catalog/aisb.t3.068_sempo.yaml +187 -0
  147. package/AISB/catalog/aisb.t3.068_sempo.zh.yaml +148 -0
  148. package/AISB/catalog/aisb.t3.069_treehfd.yaml +129 -0
  149. package/AISB/catalog/aisb.t3.069_treehfd.zh.yaml +111 -0
  150. package/AISB/catalog/aisb.t3.070_certifiedunlearning.yaml +224 -0
  151. package/AISB/catalog/aisb.t3.070_certifiedunlearning.zh.yaml +171 -0
  152. package/AISB/catalog/aisb.t3.071_neuralmjd.yaml +142 -0
  153. package/AISB/catalog/aisb.t3.071_neuralmjd.zh.yaml +120 -0
  154. package/AISB/catalog/aisb.t3.072_fedgmt.yaml +181 -0
  155. package/AISB/catalog/aisb.t3.072_fedgmt.zh.yaml +158 -0
  156. package/AISB/catalog/aisb.t3.073_rld.yaml +161 -0
  157. package/AISB/catalog/aisb.t3.073_rld.zh.yaml +129 -0
  158. package/AISB/catalog/aisb.t3.074_lsvi.yaml +163 -0
  159. package/AISB/catalog/aisb.t3.074_lsvi.zh.yaml +129 -0
  160. package/AISB/catalog/aisb.t3.075_treeslicedentropy.yaml +201 -0
  161. package/AISB/catalog/aisb.t3.075_treeslicedentropy.zh.yaml +148 -0
  162. package/AISB/catalog/aisb.t3.076_aanet.yaml +169 -0
  163. package/AISB/catalog/aisb.t3.076_aanet.zh.yaml +129 -0
  164. package/AISB/catalog/aisb.t3.077_cmnn.yaml +199 -0
  165. package/AISB/catalog/aisb.t3.077_cmnn.zh.yaml +165 -0
  166. package/AISB/catalog/aisb.t3.078_conformalanomaly.yaml +146 -0
  167. package/AISB/catalog/aisb.t3.078_conformalanomaly.zh.yaml +117 -0
  168. package/AISB/catalog/aisb.t3.079_dpfkmeans.yaml +131 -0
  169. package/AISB/catalog/aisb.t3.079_dpfkmeans.zh.yaml +104 -0
  170. package/AISB/catalog/aisb.t3.080_latentscorereweight.yaml +169 -0
  171. package/AISB/catalog/aisb.t3.080_latentscorereweight.zh.yaml +123 -0
  172. package/AISB/catalog/aisb.t3.081_qmamba.yaml +150 -0
  173. package/AISB/catalog/aisb.t3.081_qmamba.zh.yaml +117 -0
  174. package/AISB/catalog/aisb.t3.082_onlinellmrouting.yaml +160 -0
  175. package/AISB/catalog/aisb.t3.082_onlinellmrouting.zh.yaml +133 -0
  176. package/AISB/catalog/aisb.t3.083_starformer.yaml +178 -0
  177. package/AISB/catalog/aisb.t3.083_starformer.zh.yaml +140 -0
  178. package/AISB/catalog/aisb.t3.084_ift.yaml +139 -0
  179. package/AISB/catalog/aisb.t3.084_ift.zh.yaml +111 -0
  180. package/AISB/catalog/aisb.t3.085_neuralsurv.yaml +183 -0
  181. package/AISB/catalog/aisb.t3.085_neuralsurv.zh.yaml +143 -0
  182. package/AISB/catalog/aisb.t3.086_stella.yaml +197 -0
  183. package/AISB/catalog/aisb.t3.086_stella.zh.yaml +142 -0
  184. package/AISB/catalog/aisb.t3.087_moses.yaml +167 -0
  185. package/AISB/catalog/aisb.t3.087_moses.zh.yaml +132 -0
  186. package/AISB/catalog/aisb.t3.088_channelnorm.yaml +140 -0
  187. package/AISB/catalog/aisb.t3.088_channelnorm.zh.yaml +109 -0
  188. package/AISB/catalog/aisb.t3.089_causalvelocity.yaml +730 -0
  189. package/AISB/catalog/aisb.t3.089_causalvelocity.zh.yaml +668 -0
  190. package/AISB/catalog/aisb.t3.090_rstib.yaml +144 -0
  191. package/AISB/catalog/aisb.t3.090_rstib.zh.yaml +109 -0
  192. package/AISB/catalog/aisb.t3.091_timeawarecausal.yaml +132 -0
  193. package/AISB/catalog/aisb.t3.091_timeawarecausal.zh.yaml +107 -0
  194. package/AISB/catalog/aisb.t3.092_kmeanslocalopt.yaml +138 -0
  195. package/AISB/catalog/aisb.t3.092_kmeanslocalopt.zh.yaml +110 -0
  196. package/AISB/catalog/aisb.t3.093_fedwmsam.yaml +134 -0
  197. package/AISB/catalog/aisb.t3.093_fedwmsam.zh.yaml +106 -0
  198. package/AISB/catalog/aisb.t3.094_boundre.yaml +147 -0
  199. package/AISB/catalog/aisb.t3.094_boundre.zh.yaml +114 -0
  200. package/AISB/catalog/aisb.t3.095_fastfeaturecp.yaml +153 -0
  201. package/AISB/catalog/aisb.t3.095_fastfeaturecp.zh.yaml +118 -0
  202. package/AISB/catalog/aisb.t3.096_m3svm.yaml +189 -0
  203. package/AISB/catalog/aisb.t3.096_m3svm.zh.yaml +149 -0
  204. package/AISB/catalog/aisb.t3.097_wassersteintl.yaml +212 -0
  205. package/AISB/catalog/aisb.t3.097_wassersteintl.zh.yaml +169 -0
  206. package/AISB/catalog/aisb.t3.098_xmahalanobis.yaml +171 -0
  207. package/AISB/catalog/aisb.t3.098_xmahalanobis.zh.yaml +127 -0
  208. package/AISB/catalog/aisb.t3.099_ollalanding.yaml +248 -0
  209. package/AISB/catalog/aisb.t3.099_ollalanding.zh.yaml +182 -0
  210. package/AISB/catalog/aisb.t3.100_invmissingdata.yaml +179 -0
  211. package/AISB/catalog/aisb.t3.100_invmissingdata.zh.yaml +150 -0
  212. package/AISB/catalog/aisb.t3.101_acia.yaml +164 -0
  213. package/AISB/catalog/aisb.t3.101_acia.zh.yaml +109 -0
  214. package/AISB/catalog/aisb.t3.102_stochasticff.yaml +178 -0
  215. package/AISB/catalog/aisb.t3.102_stochasticff.zh.yaml +130 -0
  216. package/AISB/catalog/aisb.t3.103_qdcp.yaml +150 -0
  217. package/AISB/catalog/aisb.t3.103_qdcp.zh.yaml +116 -0
  218. package/AISB/catalog/aisb.t3.104_balancedactiveinf.yaml +137 -0
  219. package/AISB/catalog/aisb.t3.104_balancedactiveinf.zh.yaml +104 -0
  220. package/AISB/catalog/aisb.t3.105_binaryclasseval.yaml +161 -0
  221. package/AISB/catalog/aisb.t3.105_binaryclasseval.zh.yaml +130 -0
  222. package/AISB/image/001_aisb.t3.001_savvy.jpg +0 -0
  223. package/AISB/image/002_aisb.t3.002_pinet.jpg +0 -0
  224. package/AISB/image/003_aisb.t3.003_dmsqd.jpg +0 -0
  225. package/AISB/image/004_aisb.t3.004_decentralattn.jpg +0 -0
  226. package/AISB/image/005_aisb.t3.005_tsae.jpg +0 -0
  227. package/AISB/image/006_aisb.t3.006_physense.jpg +0 -0
  228. package/AISB/image/007_aisb.t3.007_reasoningiqa.jpg +0 -0
  229. package/AISB/image/008_aisb.t3.008_meanflows.jpg +0 -0
  230. package/AISB/image/009_aisb.t3.009_scoremissing.jpg +0 -0
  231. package/AISB/image/010_aisb.t3.010_suitabilityfilter.jpg +0 -0
  232. package/AISB/image/011_aisb.t3.011_osd.jpg +0 -0
  233. package/AISB/image/012_aisb.t3.012_efficientqat.jpg +0 -0
  234. package/AISB/image/013_aisb.t3.013_appl.jpg +0 -0
  235. package/AISB/image/014_aisb.t3.014_piguard.jpg +0 -0
  236. package/AISB/image/015_aisb.t3.015_frspec.jpg +0 -0
  237. package/AISB/image/016_aisb.t3.016_mathfusion.jpg +0 -0
  238. package/AISB/image/017_aisb.t3.017_multimodalglp.jpg +0 -0
  239. package/AISB/image/018_aisb.t3.018_cotsynth.jpg +0 -0
  240. package/AISB/image/019_aisb.t3.019_dyscaleut.jpg +0 -0
  241. package/AISB/image/020_aisb.t3.020_aristotle.jpg +0 -0
  242. package/AISB/image/021_aisb.t3.021_tokenrecycling.jpg +0 -0
  243. package/AISB/image/022_aisb.t3.022_chainofreasoning.jpg +0 -0
  244. package/AISB/image/023_aisb.t3.023_guidedembed.jpg +0 -0
  245. package/AISB/image/024_aisb.t3.024_outputcentric.jpg +0 -0
  246. package/AISB/image/025_aisb.t3.025_deeper.jpg +0 -0
  247. package/AISB/image/026_aisb.t3.026_gartkg.jpg +0 -0
  248. package/AISB/image/027_aisb.t3.027_citeeval.jpg +0 -0
  249. package/AISB/image/028_aisb.t3.028_sbam.jpg +0 -0
  250. package/AISB/image/029_aisb.t3.029_cdqgeoembed.jpg +0 -0
  251. package/AISB/image/030_aisb.t3.030_processrm.jpg +0 -0
  252. package/AISB/image/031_aisb.t3.031_circuitstability.jpg +0 -0
  253. package/AISB/image/032_aisb.t3.032_ptsolver.jpg +0 -0
  254. package/AISB/image/033_aisb.t3.033_gcse.jpg +0 -0
  255. package/AISB/image/034_aisb.t3.034_ensemblewm.jpg +0 -0
  256. package/AISB/image/035_aisb.t3.035_moralvalueswa.jpg +0 -0
  257. package/AISB/image/036_aisb.t3.036_weakstrongpref.jpg +0 -0
  258. package/AISB/image/037_aisb.t3.037_dementiamask.jpg +0 -0
  259. package/AISB/image/038_aisb.t3.038_tinysam.jpg +0 -0
  260. package/AISB/image/039_aisb.t3.039_calf.jpg +0 -0
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@@ -7,6 +7,7 @@ skill_role: stage
7
7
  # Finalize
8
8
 
9
9
  Use this skill to close or pause a quest responsibly.
10
+ The goal is to leave a stable stopping point and a clean resume path, not to keep rediscovering work that is already done.
10
11
 
11
12
  ## Interaction discipline
12
13
 
@@ -20,6 +21,33 @@ Use this skill to close or pause a quest responsibly.
20
21
  - Rechecking that the same bundle files still exist, or re-aligning status surfaces without changing the closure judgment, does not by itself count as a fresh milestone.
21
22
  - Hard execution rule: if this stage needs terminal work such as Git inspection, packaging checks, document builds, or file inspection, every such command must go through `bash_exec`.
22
23
 
24
+ ## Three-layer todo contract
25
+
26
+ - keep quest-root `plan.md` as the top-level research map and closure map
27
+ - keep workspace `PLAN.md` as the active finalize-node contract when closure work is multi-step
28
+ - keep workspace `CHECKLIST.md` as the finalize execution frontier with one real in-progress item and a short `Next` list
29
+ - if the frontier stops changing, stop nesting closure chores and make the route judgment explicit
30
+
31
+ ## Research-map role
32
+
33
+ - `finalize` is the loop-closure controller, not automatic quest death
34
+ - the finalize outcome should update quest-root `plan.md` to one of: `stop`, `park_and_continue_later`, or `publish_and_continue_from_new_incumbent`
35
+ - every finalize handoff should leave explicit reopen conditions and, when relevant, the next loop candidate
36
+
37
+ ## Current-node plan and checklist
38
+
39
+ When finalize work is multi-step, create or refresh:
40
+
41
+ - workspace `PLAN.md` as the finalize-node contract
42
+ - workspace `CHECKLIST.md` as the finalize execution frontier
43
+
44
+ The finalize node should make explicit:
45
+
46
+ - which closure state is currently most justified
47
+ - what evidence still blocks closure
48
+ - what reopen condition still matters
49
+ - whether the next edge is stop, park, or a new loop
50
+
23
51
  ## Stage purpose
24
52
 
25
53
  The finalize stage should not pretend every line succeeded.
@@ -66,8 +94,16 @@ For paper-like deliverables, do not finalize while any of these remain true:
66
94
  - required main-text outline items are still unresolved
67
95
  - completed analysis remains unmapped into the paper contract
68
96
  - the active paper line still reports open supplementary work that is expected to block the manuscript
97
+ - the current paper contract rows still fail to expose the main experiment or required analysis rows that the manuscript depends on
98
+ - `artifact.validate_manuscript_coverage(detail='full')` does not report `submission_ready=true`
99
+ - `artifact.validate_academic_outline(detail='full')` does not pass for the selected outline
100
+ - `artifact.validate_manuscript_language(detail='full')` reports main-text wording blockers
101
+ - the latest bundle is only a `draft_checkpoint` or `review_package`
69
102
 
70
103
  If the current paper-state blocker is not obvious from the existing files, call `artifact.get_paper_contract_health(detail='full')` before deciding whether finalize is legitimate.
104
+ If the exact section rows, evidence rows, or experiment-matrix rows matter, call `artifact.get_paper_contract(detail='full')` before deciding whether finalize is legitimate.
105
+ If a paper bundle exists, call `artifact.validate_manuscript_coverage(detail='full')` before treating the paper line as final.
106
+ If a selected outline or draft exists, call `artifact.validate_academic_outline(detail='full')` and `artifact.validate_manuscript_language(detail='full')` before treating the paper line as final.
71
107
  If the active quest/runtime state is unclear after restart or long pause, call `artifact.get_quest_state(detail='summary')` first.
72
108
  If the exact latest `SUMMARY.md`, `status.md`, or active user requirement wording matters for closure, call `artifact.read_quest_documents(...)`.
73
109
  If earlier user/assistant continuity matters for whether the quest should really stop, call `artifact.get_conversation_context(...)` instead of guessing from prompt context alone.
@@ -290,9 +326,32 @@ Write to memory only when the lesson is reusable across quests, such as:
290
326
  - robust baseline lessons
291
327
  - durable writing or evaluation lessons
292
328
 
329
+ If later continuation remains plausible, also write or refresh one compact checkpoint-style quest memory card that mirrors the live resume packet.
330
+ That checkpoint-style memory should usually state:
331
+
332
+ - current route
333
+ - current active node such as the live paper line, accepted bundle pair, or active continue-later checkpoint
334
+ - node history: which earlier node(s), report/decision pairs, or closure paths were superseded
335
+ - strongest retained result or blocker
336
+ - what not to reopen by default
337
+ - next resume step
338
+ - first files to read
339
+ - reopen conditions
340
+
341
+ Preferred tags usually include:
342
+
343
+ - `stage:finalize`
344
+ - `type:checkpoint-memory`
345
+ - `type:status-clarification`
346
+ - `route:<current_route>`
347
+ - `node:<current_active_node>` when the node label is stable enough to reuse
348
+
349
+ Use `references/checkpoint-memory-template.md` when helpful so the current node history stays explicit.
350
+
293
351
  Stage-end requirement:
294
352
 
295
353
  - if finalize produced a durable cross-quest lesson worth reusing later, write at least one `memory.write(...)` before leaving the stage
354
+ - if the quest is stopping at continue-later / pause-ready rather than true completion, write or refresh one checkpoint-style quest memory card before leaving the stage
296
355
 
297
356
  Quest-specific closure state belongs in files and artifacts first, not only memory.
298
357
 
@@ -333,6 +392,7 @@ Use these references when you need a denser closure checklist:
333
392
 
334
393
  - `references/finalization-checklist.md`
335
394
  - `references/resume-packet-template.md`
395
+ - `references/checkpoint-memory-template.md`
336
396
 
337
397
  ## Exit criteria
338
398
 
@@ -343,3 +403,5 @@ Exit the finalize stage once one of the following is durably true:
343
403
  - the limitations and recommendation are explicit
344
404
  - the stopping point is recorded through artifact
345
405
  - the claim ledger and package inventory are clear enough for later resumption or publication handoff
406
+
407
+ A good finalize pass leaves the quest easier to reopen correctly than it was before finalization began.
@@ -0,0 +1,49 @@
1
+ # Checkpoint Memory Template
2
+
3
+ Use this when the quest is pausing, entering continue-later, or otherwise needs one compact memory card that says exactly where later turns should resume.
4
+
5
+ ## Recommended structure
6
+
7
+ ### 1. Current route
8
+
9
+ - current route label
10
+ - current stage / anchor
11
+ - short closure or continue-later judgment
12
+
13
+ ### 2. Current active node
14
+
15
+ - active paper line / run node / report-decision pair
16
+ - why this is the authoritative checkpoint now
17
+
18
+ ### 3. Node history
19
+
20
+ - predecessor node(s)
21
+ - superseded completion, experiment, or writing paths
22
+ - why the current checkpoint replaced them
23
+
24
+ ### 4. Strongest retained result or blocker
25
+
26
+ - strongest still-valid result
27
+ - or the dominant blocker
28
+ - why it matters
29
+
30
+ ### 5. Do-not-reopen by default
31
+
32
+ - experiments, branches, or closure paths that should stay closed unless new evidence appears
33
+ - any explicit do-not-repeat rule
34
+
35
+ ### 6. Next resume step
36
+
37
+ - the single best next step
38
+ - why it dominates alternatives
39
+
40
+ ### 7. First-read files
41
+
42
+ - `status.md`
43
+ - `SUMMARY.md`
44
+ - active resume / handoff packet
45
+ - current manifest, report, or decision file that defines the live checkpoint
46
+
47
+ ### 8. Reopen condition
48
+
49
+ - exact condition that would justify reopening an older node or switching away from the current checkpoint
@@ -10,6 +10,13 @@ Use this when the quest is pausing rather than ending permanently.
10
10
  - present stage
11
11
  - final recommendation at pause time
12
12
 
13
+ ### 1A. Current node history
14
+
15
+ - current active node
16
+ - predecessor node(s)
17
+ - superseded node(s) or closure paths
18
+ - why the current node is the authoritative resume point
19
+
13
20
  ### 2. Accepted baseline
14
21
 
15
22
  - baseline id or path
@@ -6,12 +6,162 @@ skill_role: stage
6
6
 
7
7
  # Idea
8
8
 
9
- Use this skill to turn the current baseline and problem frame into concrete, literature-grounded, testable directions.
9
+ Use this skill to turn the current baseline and problem frame into concrete, literature-grounded, frontier-aware, testable directions.
10
+ The goal is to choose the next executable research route, not to maximize brainstorming volume or reward shallow novelty.
10
11
 
11
12
  When `startup_contract.need_research_paper = false` and the quest already has a concrete optimization handle, `idea` may stop after selecting or seeding a direction and then hand off into `optimize` instead of insisting on the full paper-oriented ideation loop.
12
13
  In that algorithm-first case, `idea` should usually produce a small method-brief frontier and then defer candidate ranking, promotion, and bounded search to `optimize`.
13
14
  When doing that handoff, prefer the brief-shaping discipline later used by `optimize`: clarify the bottleneck and constraints, keep only a small differentiated `2-3` option slate, and hand off a recommended brief rather than a pile of loose intuitions.
14
15
 
16
+ ## Match signals
17
+
18
+ Use `idea` when:
19
+
20
+ - the accepted baseline and metric contract already exist, but the next route is still unresolved
21
+ - the current line failed and the quest needs a new falsifiable direction
22
+ - the problem is not "build a new module" but "decide what kind of route should be tried next"
23
+ - the current bottleneck might be a mechanism problem, an objective mismatch, a measurement/evaluator problem, or an infrastructure constraint that changes what should be tested next
24
+
25
+ Do not use `idea` when:
26
+
27
+ - the baseline gate is still unresolved
28
+ - the current board state is too stale or conflicting to say what the mainline actually is
29
+ - the next step is already obviously `write`, `review`, or `finalize`
30
+
31
+ If the current board cannot be compressed cleanly, route through `decision` or `intake-audit` before widening the frontier.
32
+
33
+ ## One-sentence summary
34
+
35
+ Turn the current objective, board state, and bottleneck into a small differentiated frontier, then select the next falsifiable route.
36
+
37
+ ## Control workflow
38
+
39
+ 1. Write the objective contract.
40
+ Use `references/objective-contract-template.md`.
41
+ Make the real target, trusted proxies, false-progress signals, and hard constraints explicit before generating ideas.
42
+ Default durable path: `artifacts/idea/objective_contract.md`.
43
+ 2. Write the current board packet.
44
+ Use `references/current-board-packet-template.md`.
45
+ Compress the incumbent, latest decisive result, active blocker, and stale routes-to-ignore into one current state surface.
46
+ Default durable path: `artifacts/idea/current_board_packet.md`.
47
+ 3. Identify the important contradiction and plausible novelty source.
48
+ Use `references/high-value-idea-sourcing.md`.
49
+ Start from the most important unresolved contradiction, anomaly, bottleneck, or failure region rather than from a preferred mechanism.
50
+ 4. Run a broad, history-aware literature search before proposing serious ideas.
51
+ Use `references/related-work-playbook.md`, `references/research-history-playbook.md`, and `references/literature-survey-template.md`.
52
+ Cover direct in-domain frontier papers, foundational papers, strongest nearby competitors, and cross-domain papers whose mechanisms may translate into the current task.
53
+ If the runtime prompt explicitly enables cross-quest recall, follow that injected policy before going outside; otherwise stay inside the current quest's memory/artifacts and explicit user-provided files. See playbook §2.1 for the full source-order protocol.
54
+ If DeepXiv is available, use it for broad paper-centric discovery and citation expansion; otherwise use search engines and citation chaining directly.
55
+ Do not promote or even seriously shortlist a new idea until the durable survey and closest-prior-work comparison are updated enough to judge novelty and feasibility honestly.
56
+ 5. Extract the limitation pattern and novelty opportunity from the survey.
57
+ Distinguish what is already saturated, what is only a decorative tweak, and what could still support a differentiated route.
58
+ Default against small local edits unless they are explicitly shown to be the highest-value surviving route.
59
+ 6. Choose the idea family mix.
60
+ At minimum, decide whether the current pass should consider some mix of:
61
+ - mechanism-family routes
62
+ - objective-family routes
63
+ - measurement-family routes
64
+ - infrastructure-family routes
65
+ 7. Run bounded brainstorming.
66
+ Use `references/controlled-brainstorming-playbook.md` when the route is not already obvious.
67
+ Generate a small, meaningfully different slate rather than a pile of micro-variants.
68
+ Prefer candidate families that could change the conclusion, capability boundary, or paper value materially, not just move a knob.
69
+ 8. Write a compact pre-idea draft for the serious surviving candidates.
70
+ Use `references/pre-idea-draft-template.md`.
71
+ Normally write drafts for the top `1-3` candidates, not for the whole raw slate.
72
+ The draft must surface hidden assumptions, local-optimum lock-in risk, strongest outside-family alternative, strongest rejection case, and the cheapest falsification path before any formal idea submission.
73
+ Default durable path per candidate: `artifacts/idea/pre_idea_drafts/<candidate_id>.md`.
74
+ 9. Filter aggressively.
75
+ Use `references/selection-gate.md`.
76
+ Remove candidates that only improve a surrogate, reopen a stale route without new evidence, violate leakage or submission-time boundaries, or lack a cheap falsification path.
77
+ 10. Select and hand off.
78
+ The selected package must include the route, why now, novelty type, main risk, anti-win condition, core hypothesis, mechanism sketch, strongest falsification experiment, minimal validation, abandonment condition, and the next stage.
79
+
80
+ ## Draft-before-submit SOP
81
+
82
+ Before a direction is formally submitted as the selected idea, write a compact pre-idea draft or equivalent durable challenge memo for each serious surviving candidate.
83
+
84
+ The default rule is:
85
+
86
+ - raw brainstorming can widen the frontier
87
+ - pre-idea drafts narrow and stress-test the frontier
88
+ - only then can a final selected idea be submitted
89
+
90
+ The pre-idea draft exists to stop three failure modes:
91
+
92
+ - local-optimum lock-in around the current mainline
93
+ - hidden assumptions staying implicit
94
+ - attractive ideas being promoted before the strongest rejection case is written down
95
+
96
+ Unless there is already an up-to-date equivalent artifact, do not formally submit the final idea until at least one pre-idea draft has:
97
+
98
+ - been written for the likely winner
99
+ - been compared against the incumbent and at least one outside-family or assumption-reversal alternative
100
+ - been revised, rejected, or promoted based on that comparison
101
+
102
+ Default durable path rules:
103
+
104
+ - objective contract: `artifacts/idea/objective_contract.md`
105
+ - current board packet: `artifacts/idea/current_board_packet.md`
106
+ - candidate frontier summary: `artifacts/idea/candidates.md`
107
+ - pre-idea draft per serious candidate: `artifacts/idea/pre_idea_drafts/<candidate_id>.md`
108
+ - final selected idea: `artifacts/idea/selected_idea.md`
109
+
110
+ When a candidate is promoted, `artifacts/idea/selected_idea.md` should point back to the winning pre-idea draft path instead of losing that lineage in prose only.
111
+
112
+ ## AVOID / pitfalls
113
+
114
+ - Do not start from swapping method A for method B before naming the important contradiction or bottleneck.
115
+ - Do not brainstorm before the real objective and false-progress signals are explicit.
116
+ - Do not treat lower loss, better average surrogate, or cleaner intermediate metrics as route health if the real target is unchanged.
117
+ - Do not reopen stale routes unless new evidence explicitly weakens the current mainline.
118
+ - Do not generate a large within-family variant swarm before the mechanism family itself is chosen.
119
+ - Do not propose an idea as "new" before the direct-field and adjacent transferable literature have both been checked.
120
+ - Do not default to cosmetic modifications, parameter nudges, or tiny architecture swaps unless the survey and bottleneck analysis show they are genuinely the best surviving route.
121
+ - Do not let the current mainline, favorite mechanism, or easiest implementation path lock the search into a local optimum while the hidden assumptions behind that line remain unchallenged.
122
+ - Do not jump from brainstorming notes straight to final idea submission without a compact draft that forces the hidden assumptions, strongest rejection case, and falsification path into the open.
123
+ - Do not treat novelty as “totally unprecedented”; it may come from a new problem, view, mechanism, method, setting, evaluation, or boundary condition.
124
+ - Do not promote a direction that fails a value/feasibility screen simply because it sounds exciting.
125
+ - Do not promote a direction without a cheap falsification path and a visible anti-win condition.
126
+
127
+ ## Constraints
128
+
129
+ - Keep the accepted dataset, metric, and evaluation contract fixed unless scope explicitly changed.
130
+ - Do not propose routes that depend on submit-time unavailable features.
131
+ - Do not propose routes that introduce leakage-prone targets or labels into training.
132
+ - Do not let implementation convenience outrank target alignment.
133
+ - Search should be broad enough to map the main paradigms, history, and strongest overlaps, not just skim a few recent papers.
134
+ - Search must cover both the current field's strongest direct papers and adjacent or cross-domain papers whose mechanisms may translate into the current task, evaluator, or systems setting.
135
+ - If DeepXiv is available, prefer it for broad paper-centric discovery; otherwise use search engines, citation chaining, and open-web search directly.
136
+ - Serious idea generation should happen only after the survey is broad enough to rule out obvious rediscoveries and to reveal non-trivial opportunity gaps.
137
+ - A serious candidate should be explainable in terms of importance, novelty type, feasibility, verification path, and failure value.
138
+ - By default, prefer routes with step-change or boundary-changing potential over small local refinements.
139
+ - Small refinements are allowed only when the literature and current evidence indicate they are still the highest-value route and the reason is stated explicitly.
140
+ - In system optimization work, a valid idea may be a mechanism change, an objective/evaluator correction, a measurement fix, or an infrastructure change if that is what best improves the real target.
141
+
142
+ ## Validation
143
+
144
+ Before the idea pass can end, the durable selected idea package should make explicit:
145
+
146
+ - the important contradiction, gap, anomaly, or bottleneck it is targeting
147
+ - the literature coverage used to justify the route, including direct-field papers and adjacent transferable papers
148
+ - the dominant novelty type
149
+ - the targeted limitation
150
+ - the real objective and the strongest false-progress signal
151
+ - the pre-idea draft or equivalent challenge memo that preceded promotion
152
+ - the selected direction and why it won now
153
+ - why the selected route is not merely a decorative tweak relative to the closest prior work or current baseline
154
+ - the value/feasibility screen or equivalent judgment
155
+ - the core hypothesis
156
+ - the mechanism sketch
157
+ - the strongest falsification experiment
158
+ - the anti-win condition
159
+ - the minimal validation
160
+ - the abandonment condition
161
+ - the next stage
162
+
163
+ If those fields are still fuzzy, continue ideation or route back through `decision` rather than pretending the route is ready.
164
+
15
165
  ## Interaction discipline
16
166
 
17
167
  - Follow the shared interaction contract injected by the system prompt.
@@ -23,6 +173,38 @@ When doing that handoff, prefer the brief-shaping discipline later used by `opti
23
173
  - Message templates are references only. Adapt to the actual context and vary wording so updates feel natural and non-robotic.
24
174
  - If a threaded user reply arrives, interpret it relative to the latest idea progress update before assuming the task changed completely.
25
175
 
176
+ ## Three-layer todo contract
177
+
178
+ - keep quest-root `plan.md` as the research map for the whole quest loop
179
+ - keep workspace `PLAN.md` as the active idea-node contract when ideation is multi-step, literature-heavy, or route-sensitive
180
+ - keep workspace `CHECKLIST.md` as the active ideation frontier with one real in-progress item and a short `Next` list
181
+ - if the execution frontier stops changing across repeated passes, revise the node contract or the research map instead of nesting more substeps
182
+
183
+ ## Research-map role
184
+
185
+ - `idea` selects or refreshes the next route within the current loop; it does not replace the whole quest roadmap
186
+ - when an idea is selected, rejected, or downgraded, update quest-root `plan.md` so the next experiment node or fallback decision node is explicit
187
+ - when a strong result later becomes the new incumbent, the next idea pass should open a new loop entry in quest-root `plan.md` rather than drifting into ad hoc brainstorming
188
+
189
+ ## Current-node plan and checklist
190
+
191
+ When ideation becomes multi-step, create or refresh:
192
+
193
+ - workspace `PLAN.md` as the current idea-node contract
194
+ - workspace `CHECKLIST.md` as the ideation frontier
195
+
196
+ The idea node should make explicit:
197
+
198
+ - which bottleneck is being attacked now
199
+ - which candidate families are still live
200
+ - what selection gate must be cleared before experiment
201
+
202
+ Before widening the frontier, the node should also make explicit:
203
+
204
+ - the current objective contract
205
+ - the current board packet
206
+ - which candidate-family mix is actually being explored in this pass
207
+
26
208
  ## Stage purpose
27
209
 
28
210
  The idea stage should not generate vague inspiration.
@@ -34,9 +216,10 @@ It should produce executable hypotheses tied to:
34
216
  - the strongest relevant prior work
35
217
 
36
218
  This stage is not just "brainstorming".
37
- It is the research-direction selection stage.
219
+ It is a controlled brainstorming plus route-selection stage.
38
220
  It still needs a bounded creative-divergence phase before convergence.
39
221
  Do not collapse onto the first plausible route just because it sounds implementable.
222
+ Do not settle for a low-amplitude tweak when a broader, still-feasible route remains live.
40
223
  It should normally create a new candidate direction branch and node; it does not by itself decide the next optimization round.
41
224
  The output must survive three checks at once:
42
225
 
@@ -44,11 +227,13 @@ The output must survive three checks at once:
44
227
  - feasibility in the current repo and resource budget
45
228
  - manuscript defensibility if the line later becomes a paper claim
46
229
 
230
+ When multiple routes survive, prefer the most differentiated route that is still falsifiable and executable in the current repo, rather than the easiest tiny patch.
231
+
47
232
  When the route already looks likely to become a paper-facing line, seed one lightweight structured outline candidate during idea work.
48
233
  Use `artifact.submit_paper_outline(mode='candidate', ...)` for that seed instead of leaving the future paper structure only in prose.
49
234
  Use `references/outline-seeding-example.md` for the minimum acceptable shape.
50
- The idea-stage outline candidate is not the full paper line yet, but it should already name the likely `research_questions`, `experimental_designs`, and the first section-level evidence needs that later supplementary slices must satisfy.
51
- Keep that seed minimal and executable: a small section skeleton plus expected evidence items is better than a long narrative outline with no concrete evidence hooks.
235
+ The idea-stage outline candidate is not the full paper line yet, but it should already name the likely one-sentence paper idea, scoped claims, `research_questions`, `experimental_designs`, and the first section-level evidence needs that later supplementary slices must satisfy.
236
+ Keep that seed minimal and executable: a short `paper_view` plus expected evidence items is better than a long narrative outline with no concrete evidence hooks.
52
237
  If the current research head, strongest measured branch, or active runtime refs are unclear after resume, call `artifact.get_quest_state(detail='summary')` and `artifact.list_research_branches(...)` before choosing a foundation.
53
238
  If the current brief / plan / status wording matters for direction choice, call `artifact.read_quest_documents(...)`.
54
239
  If earlier user conversation materially changes the direction-selection target, call `artifact.get_conversation_context(...)` before locking the next idea.
@@ -81,7 +266,7 @@ At the direction level, prefer elegant algorithmic or theoretical improvements o
81
266
  This stage should preserve the strongest old DeepScientist direction-selection logic:
82
267
 
83
268
  - understand the baseline and its failure modes
84
- - search related work broadly before claiming an idea is good
269
+ - search related work broadly before claiming an idea is good, including adjacent fields with translatable mechanisms
85
270
  - derive limitations
86
271
  - produce a compact set of candidate ideas from an explicit direction set
87
272
  - rank them with explicit tradeoffs
@@ -101,6 +286,8 @@ Candidate sets should usually cover some mix of:
101
286
  - a strong local refinement of the incumbent
102
287
  - an orthogonal alternative that addresses the same bottleneck differently
103
288
  - a cleaner or more defensible route with lower conceptual complexity
289
+ - an objective/evaluator fix when the current route may be optimizing the wrong thing
290
+ - an infrastructure or throughput fix when measurement cost itself is blocking useful iteration
104
291
 
105
292
  Do not default to “run a small experiment and see” as the way to break ties.
106
293
  Break ties primarily through careful reasoning over:
@@ -117,26 +304,30 @@ Break ties primarily through careful reasoning over:
117
304
  - Do not select an idea before checking whether close prior work already did it.
118
305
  - Do not confuse "I can implement this" with "this is a publishable or useful research direction".
119
306
  - Do not treat a weak literature search as sufficient because the idea sounds elegant.
120
- - Do not write, promote, or submit a final idea until the durable survey covers at least `5` and usually `5-10` task-modeling-related, mechanism-relevant, or otherwise directly usable papers.
121
- - Treat that literature floor as a hard gate, not a suggestion.
122
- If the direct task-modeling neighborhood truly contains fewer than `5` usable papers, record that evidence explicitly and fill the remaining slots with the closest adjacent papers whose mechanism can be translated into the current task and codebase.
307
+ - Do not start serious ideation from memory or taste alone; refresh the external literature unless the existing survey already covers the needed frontier and that reuse is recorded explicitly.
308
+ - Do not treat the current field as the only search space; check cross-domain mechanism transfer whenever the bottleneck might admit it.
309
+ - Do not promote a small tweak by default; if an incremental route wins, record why broader routes failed on novelty, feasibility, or claim value.
310
+ - For paper-ready idea packages, aim for a durable survey that usually covers at least `5` and often `5-10` task-modeling-related, mechanism-relevant, or otherwise directly usable papers.
311
+ - If the direct task-modeling neighborhood truly contains fewer than `5` usable papers, record that evidence explicitly and fill the remaining coverage with the closest adjacent papers whose mechanism can still be translated into the current task and codebase.
123
312
  - Algorithm-first exception:
124
313
  - when `startup_contract.need_research_paper = false` and a concrete optimization handle already exists, you may stop after a memory sweep plus a small targeted paper check instead of satisfying the full `5-10` paper floor
125
314
  - use that exception only when the immediate goal is method-brief selection for `optimize`, not paper-level novelty claims
126
315
  - if you use the exception, say explicitly that the output is an optimization brief frontier rather than a paper-ready idea package
127
316
  - still shape that frontier deliberately: clarify the bottleneck and comparability boundary first, keep a differentiated `2-3` candidate slate, and explain why one brief is recommended now
128
- - Every fresh idea build or idea-refinement pass must begin with:
317
+ - Every fresh idea build or idea-refinement pass should begin with:
129
318
  - a memory sweep, and
130
- - an external literature sweep.
131
- - Every fresh or resumed idea pass must update `artifacts/idea/literature_survey.md` or an equivalent durable survey report before a direction is promoted.
319
+ - an external literature sweep or a clear reason why the existing survey is already sufficient.
320
+ - For paper-ready promotion, refresh `artifacts/idea/literature_survey.md` or an equivalent durable survey report before the direction is promoted.
132
321
  - Every survey update must explicitly separate:
133
322
  - reused prior survey coverage
134
323
  - newly added papers or comparisons from this pass
135
324
  - still-missing or unresolved overlaps
136
325
  - When a web/search tool is available, actively use it.
137
326
  Prefer web search for paper discovery, usually targeting arXiv first, then expand with citation and open-web search for neighborhood coverage.
327
+ - If DeepXiv is declared available by the system prompt, prefer the DeepXiv route for paper-centric discovery and shortlist paper triage before broad open-web search.
328
+ - If DeepXiv is declared unavailable, do not try to force it; stay on the legacy route.
138
329
  - When a concrete arXiv paper needs to be read, compared, or summarized, use `artifact.arxiv(paper_id=..., full_text=False)`.
139
- Keep search in web discovery; use `artifact.arxiv(...)` for reading shortlisted papers, and set `full_text=True` only when needed.
330
+ Keep search in web discovery by default; use `artifact.arxiv(...)` for reading shortlisted papers, and set `full_text=True` only when needed.
140
331
  - Before opening a broad new search, check quest and global memory with `memory.search(...)` and reuse existing paper notes, idea notes, and knowledge cards.
141
332
  - Search for genuinely missing, newly relevant, or more recent papers whenever possible.
142
333
  Do not rerun the same broad search without stating what gap the new search is meant to close.
@@ -212,6 +403,7 @@ Do not skip the `scout` pass just because the quest is already in the `idea` sta
212
403
 
213
404
  Use `references/idea-thinking-flow.md` when the main need is better reasoning hygiene.
214
405
  Use `references/idea-generation-playbook.md` when the main need is to create a new idea slate and select one clear next research object.
406
+ Use `references/high-value-idea-sourcing.md` when the main need is to identify a truly important contradiction or bottleneck before widening.
215
407
 
216
408
  Default creation flow for a fresh idea pass:
217
409
 
@@ -283,10 +475,20 @@ If durable quest memory already contains a recent and explicit survey, reuse it
283
475
  For a normal selected-idea decision, the durable sweep must end with at least `5` and usually `5-10` papers that are close enough to the task-modeling problem, failure mode, mechanism, or codebase translation question to inform the actual design.
284
476
  This floor exists to prevent thin novelty claims and under-motivated ideas, not to reward quota chasing.
285
477
 
478
+ Do not treat “recent papers” as a substitute for “the field history”.
479
+ At minimum, map:
480
+
481
+ - seminal or foundational papers
482
+ - turning-point or paradigm-shift papers
483
+ - current mainstream or SOTA papers
484
+
485
+ Then use citation chaining to reconstruct how the question evolved and where the real breakpoints still are.
486
+
286
487
  When tools allow it, combine:
287
488
 
288
489
  - `memory.search(...)` and recent memory reads
289
- - web search for arXiv and adjacent sources
490
+ - DeepXiv for broad paper-centric discovery and citation expansion when available
491
+ - otherwise web search for arXiv and adjacent sources
290
492
  - `artifact.arxiv(paper_id=..., full_text=False)` for actually reading shortlisted papers
291
493
  - citation expansion or open-web search for follow-up papers, code, and comparisons
292
494
 
@@ -338,6 +540,8 @@ If the search is still too thin to support a novelty or value judgment, the idea
338
540
 
339
541
  The idea stage should usually leave behind:
340
542
 
543
+ - an objective contract
544
+ - a current board packet
341
545
  - a limitations analysis
342
546
  - a literature survey report
343
547
  - a survey-delta section that marks:
@@ -349,6 +553,7 @@ The idea stage should usually leave behind:
349
553
  - `2-5` candidate ideas, with the final serious frontier usually narrowed to `2-3`
350
554
  - a selected idea or explicit rejection of the current line
351
555
  - a durable Markdown idea draft that is finalized before the accepted idea is submitted
556
+ - one pre-idea draft per serious surviving candidate, usually `1-3`
352
557
  - one or more memory cards for reusable rationale
353
558
  - one or more quest `papers` cards for the strongest papers or search clusters
354
559
  - an idea artifact and a decision artifact
@@ -380,14 +585,20 @@ Do not force this structure for every tiny ideation turn, but use it when the qu
380
585
 
381
586
  Recommended durable files:
382
587
 
588
+ - `artifacts/idea/objective_contract.md`
589
+ - `artifacts/idea/current_board_packet.md`
383
590
  - `artifacts/idea/literature_survey.md`
384
591
  - `artifacts/idea/related_work.md`
385
592
  - `artifacts/idea/limitations.md`
386
593
  - `artifacts/idea/candidates.md`
594
+ - `artifacts/idea/pre_idea_drafts/<candidate_id>.md`
387
595
  - `artifacts/idea/selected_idea.md`
388
596
  - `artifacts/idea/research_outline.md`
389
597
 
390
598
  When producing the literature survey report, prefer the structure in `references/literature-survey-template.md`.
599
+ When writing the objective contract, prefer `references/objective-contract-template.md`.
600
+ When writing the current board packet, prefer `references/current-board-packet-template.md`.
601
+ When the route needs a bounded but real creative-divergence pass, prefer `references/controlled-brainstorming-playbook.md`.
391
602
 
392
603
  When producing a full research-outline style note, prefer the detailed structure in `references/research-outline-template.md`.
393
604
 
@@ -1225,9 +1436,9 @@ Preferred artifact choices:
1225
1436
  - use `approval` when the user explicitly confirms a preference-sensitive choice
1226
1437
  - use `milestone` when ideation hits a meaningful user-visible checkpoint
1227
1438
 
1228
- If the idea is selected and becomes the active route, immediately call `artifact.submit_idea(mode='create', lineage_intent='continue_line'|'branch_alternative', ...)`.
1439
+ If the idea is selected and becomes the active durable route, normally call `artifact.submit_idea(mode='create', lineage_intent='continue_line'|'branch_alternative', ...)`.
1229
1440
  Before that call, first finalize a concise but durable Markdown draft for the chosen route.
1230
- Do not start writing that final draft until the literature survey has already met the hard minimum of at least `5` and usually `5-10` usable papers.
1441
+ For a paper-ready idea package, do not finalize that draft until the literature survey is broad enough to support the route credibly; for an execution-brief handoff, a smaller targeted survey can be enough.
1231
1442
  That draft should usually cover:
1232
1443
 
1233
1444
  - executive summary
@@ -1284,3 +1495,5 @@ Do not exit this stage with a "selected idea" if:
1284
1495
  - the novelty / value verdict is still hand-wavy
1285
1496
  - the falsification path is unclear
1286
1497
  - the experiment handoff contract is incomplete
1498
+
1499
+ A good idea pass ends with one route the next stage can actually run, or one explicit reason why no route is ready yet.
@@ -0,0 +1,78 @@
1
+ # Controlled Brainstorming Playbook
2
+
3
+ Use this reference when the current route is not already obvious and `idea` needs a real divergence pass.
4
+
5
+ The goal is not open-ended ideation.
6
+ The goal is a bounded, differentiated slate that is broad enough to avoid premature convergence and narrow enough to remain auditable.
7
+
8
+ ## 1. Enter only after framing
9
+
10
+ Before brainstorming, make sure both of these already exist:
11
+
12
+ - an objective contract
13
+ - a current board packet
14
+
15
+ If either is still fuzzy, do not widen yet.
16
+
17
+ ## 2. Choose the family mix first
18
+
19
+ Decide which route families are allowed in this pass:
20
+
21
+ - `mechanism_family`
22
+ - new algorithmic or modeling idea
23
+ - `objective_family`
24
+ - change the training target, ranking target, or optimization target
25
+ - `measurement_family`
26
+ - change the evaluator, validation lens, or what is being trusted
27
+ - `infrastructure_family`
28
+ - change throughput, batching, staging, or other system constraints that affect useful iteration
29
+
30
+ Do not default to mechanism-family routes only.
31
+
32
+ ## 3. Generate a bounded slate
33
+
34
+ Default target:
35
+
36
+ - `6-12` raw ideas
37
+ - collapse to a serious frontier of `2-3`, and at most `5`
38
+
39
+ Require visible differentiation:
40
+
41
+ - one local refinement of the incumbent
42
+ - one orthogonal alternative
43
+ - one route that changes the objective or measurement layer when that layer may be wrong
44
+ - one infrastructure or iteration-speed route when throughput itself is blocking progress
45
+
46
+ ## 4. Filter aggressively
47
+
48
+ Discard or downgrade candidates that:
49
+
50
+ - only improve a surrogate without changing the real objective
51
+ - violate hard constraints
52
+ - are just within-family micro-variants
53
+ - reopen stale routes without new evidence
54
+ - have no cheap falsification path
55
+
56
+ ## 5. Force `why now`
57
+
58
+ Every serious candidate must answer:
59
+
60
+ - what changed?
61
+ - why now?
62
+ - why this family instead of the current mainline?
63
+
64
+ If the answer is weak, the candidate should usually not survive.
65
+
66
+ ## 6. End with a structured selection
67
+
68
+ The final serious candidates should each include:
69
+
70
+ - family type
71
+ - targeted limitation
72
+ - why now
73
+ - strongest prior-work overlap
74
+ - anti-win condition
75
+ - minimal validation
76
+ - abandonment condition
77
+
78
+ The selected route should beat the others on evidence-per-run, not just novelty theater.