@rely-ai/caliber 1.12.3 → 1.12.5

package/dist/bin.js

@@ -2407,7 +2407,14 @@ These checks are currently PASSING \u2014 do NOT break them:`);
       }
     }
     parts.push(`
-IMPORTANT: Return the existing CLAUDE.md and skills with MINIMAL changes \u2014 only the edits needed to fix the above checks. Do NOT rewrite, restructure, rephrase, or make cosmetic changes. Preserve the existing content as-is except for targeted fixes. If a skill file is not related to a failing check, return it EXACTLY as-is, character for character.`);
+IMPORTANT RULES FOR TARGETED FIX:
+- Return the existing CLAUDE.md and skills with MINIMAL changes \u2014 only the edits needed to fix the above checks.
+- Do NOT rewrite, restructure, rephrase, or make cosmetic changes.
+- Preserve the existing content as-is except for targeted fixes.
+- If a skill file is not related to a failing check, return it EXACTLY as-is, character for character.
+- For "Documented commands exist": DELETE the specific invalid commands listed in the suggestion. Do NOT replace them with other commands unless you are 100% certain they exist.
+- For "Documented paths exist": DELETE the specific non-existent paths listed in the suggestion. Do NOT replace them with guessed paths.
+- For "Concise context files": Remove the least important lines to get under the line limit. Do NOT add new content.`);
   } else if (hasExistingConfigs) {
     parts.push(`Audit and improve the existing coding agent configuration for target: ${targetAgent}`);
   } else {
@@ -3193,15 +3200,15 @@ function collectSetupFiles(setup) {
     if (claude) agentRefs.push("See `CLAUDE.md` for Claude Code configuration.");
     if (cursor) agentRefs.push("See `.cursor/rules/` for Cursor rules.");
     if (agentRefs.length === 0) agentRefs.push("See CLAUDE.md and .cursor/rules/ for agent configurations.");
-    files.push({
-      path: "AGENTS.md",
-      content: `# AGENTS.md
+    const stubContent = `# AGENTS.md
 
 This project uses AI coding agents configured by [Caliber](https://github.com/rely-ai-org/caliber).
 
 ${agentRefs.join(" ")}
-`
-    });
+`;
+    files.push({ path: "AGENTS.md", content: stubContent });
+    if (!setup.codex) setup.codex = {};
+    setup.codex.agentsMd = stubContent;
   }
   return files;
 }
@@ -4398,7 +4405,7 @@ function checkAccuracy(dir) {
     earnedPoints: cmdPoints,
     passed: cmdRatio >= 0.8,
     detail: cmds.total === 0 ? "No commands documented" : `${cmds.valid.length}/${cmds.total} commands verified`,
-    suggestion: cmds.invalid.length > 0 ? `Invalid: ${cmds.invalid[0]}${cmds.invalid.length > 1 ? ` (+${cmds.invalid.length - 1} more)` : ""}` : void 0
+    suggestion: cmds.invalid.length > 0 ? `Remove these invalid commands from CLAUDE.md: ${cmds.invalid.join("; ")}` : void 0
   });
   const paths = validateDocumentedPaths(dir);
   const pathRatio = paths.total > 0 ? paths.valid.length / paths.total : 1;
@@ -4411,7 +4418,7 @@ function checkAccuracy(dir) {
     earnedPoints: pathPoints,
     passed: pathRatio >= 0.8,
     detail: paths.total === 0 ? "No file paths documented" : `${paths.valid.length}/${paths.total} paths verified`,
-    suggestion: paths.invalid.length > 0 ? `Stale path: ${paths.invalid[0]}${paths.invalid.length > 1 ? ` (+${paths.invalid.length - 1} more)` : ""}` : void 0
+    suggestion: paths.invalid.length > 0 ? `Remove these non-existent paths from CLAUDE.md: ${paths.invalid.join("; ")}` : void 0
   });
   const drift = detectConfigDrift(dir);
   let driftPoints = POINTS_CONFIG_DRIFT;
@@ -6031,6 +6038,43 @@ async function initCommand(options) {
     if (rawOutput) report.addCodeBlock("Generation: Raw LLM Response", rawOutput);
     report.addJson("Generation: Parsed Setup", generatedSetup);
   }
+  {
+    const preWriteResult = writeSetup(generatedSetup);
+    const inlineScore = computeLocalScore(process.cwd(), targetAgent);
+    if (inlineScore.score < 100) {
+      const inlineFailingChecks = inlineScore.checks.filter((c) => !c.passed && c.maxPoints > 0).filter((c) => !NON_LLM_CHECKS.has(c.id));
+      if (inlineFailingChecks.length > 0) {
+        genSpinner.text = "Polishing generated setup...";
+        log(options.verbose, `Inline polish: score ${inlineScore.score}/100, fixing ${inlineFailingChecks.length} checks`);
+        try {
+          const polishResult = await generateSetup(
+            fingerprint,
+            targetAgent,
+            void 0,
+            { onStatus: () => {
+            }, onComplete: () => {
+            }, onError: () => {
+            } },
+            inlineFailingChecks.map((c) => ({ name: c.name, suggestion: c.suggestion })),
+            inlineScore.score,
+            inlineScore.checks.filter((c) => c.passed).map((c) => ({ name: c.name })),
+            { skipSkills: true, forceTargetedFix: true }
+          );
+          if (polishResult.setup) {
+            generatedSetup = polishResult.setup;
+            writeSetup(generatedSetup);
+            log(options.verbose, "Inline polish applied");
+          }
+        } catch {
+          log(options.verbose, "Inline polish failed, continuing with original");
+        }
+      }
+    }
+    try {
+      undoSetup();
+    } catch {
+    }
+  }
   const elapsedMs = Date.now() - genStartTime;
   trackInitGenerationCompleted(elapsedMs, 0);
   const mins = Math.floor(elapsedMs / 6e4);
@@ -6174,50 +6218,7 @@ async function initCommand(options) {
   if (hookChoice === "skip") {
     console.log(chalk8.dim("  Skipped auto-refresh hooks. Run ") + chalk8.hex("#83D1EB")("caliber hooks --install") + chalk8.dim(" later to enable."));
   }
-  let afterScore = computeLocalScore(process.cwd(), targetAgent);
-  if (afterScore.score < 100) {
-    const polishFailingChecks = afterScore.checks.filter((c) => !c.passed && c.maxPoints > 0).filter((c) => !NON_LLM_CHECKS.has(c.id));
-    if (polishFailingChecks.length > 0) {
-      console.log("");
-      console.log(chalk8.dim(`  Score: ${afterScore.score}/100 \u2014 polishing ${polishFailingChecks.length} remaining check${polishFailingChecks.length === 1 ? "" : "s"}...`));
-      if (options.verbose) {
-        for (const c of polishFailingChecks) {
-          log(options.verbose, `  Polish target: ${c.name}${c.suggestion ? ` \u2014 ${c.suggestion}` : ""}`);
-        }
-      }
-      const polishFailing = polishFailingChecks.map((c) => ({
-        name: c.name,
-        suggestion: c.suggestion
-      }));
-      const polishPassing = afterScore.checks.filter((c) => c.passed).map((c) => ({ name: c.name }));
-      try {
-        const polishResult = await generateSetup(
-          fingerprint,
-          targetAgent,
-          void 0,
-          {
-            onStatus: () => {
-            },
-            onComplete: () => {
-            },
-            onError: () => {
-            }
-          },
-          polishFailing,
-          afterScore.score,
-          polishPassing,
-          { skipSkills: true, forceTargetedFix: true }
-        );
-        if (polishResult.setup) {
-          const polishWriteResult = writeSetup(polishResult.setup);
-          if (polishWriteResult.written.length > 0) {
-            afterScore = computeLocalScore(process.cwd(), targetAgent);
-          }
-        }
-      } catch {
-      }
-    }
-  }
+  const afterScore = computeLocalScore(process.cwd(), targetAgent);
   if (afterScore.score < baselineScore.score) {
     trackInitScoreRegression(baselineScore.score, afterScore.score);
     console.log("");

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@rely-ai/caliber",
-  "version": "1.12.3",
+  "version": "1.12.5",
   "description": "Analyze your codebase and generate optimized AI agent configs (CLAUDE.md, .cursorrules, skills) — no API key needed",
   "type": "module",
   "bin": {