@rdfc/sparql-ingest-processor-ts 0.4.0 → 0.4.2

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Files changed (9) hide show
  1. package/lib/SPARQLIngest.d.ts +1 -0
  2. package/lib/SPARQLIngest.js +9 -13
  3. package/lib/SPARQLQueries.d.ts +2 -2
  4. package/lib/SPARQLQueries.js +34 -20
  5. package/lib/Utils.d.ts +1 -0
  6. package/lib/Utils.js +57 -9
  7. package/lib/tsconfig.tsbuildinfo +1 -1
  8. package/package.json +9 -9
  9. package/processors.ttl +6 -0
package/lib/SPARQLIngest.d.ts CHANGED
@@ -12,6 +12,7 @@ export type TransactionConfig = {
12
12
  };
13
13
  export type IngestConfig = {
14
14
  memberIsGraph: boolean;
15
+ maxQueryLength: number;
15
16
  memberShapes?: string[];
16
17
  changeSemantics?: ChangeSemantics;
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18
  targetNamedGraph?: string;
package/lib/SPARQLIngest.js CHANGED
@@ -59,7 +59,6 @@ export async function sparqlIngest(memberStream, config, sparqlWriter) {
59
59
  }
60
60
  }
61
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  let query;
62
- let queryType;
63
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  if (config.changeSemantics) {
64
63
  if (transactionMembers.length > 0) {
65
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  query = createTransactionQueries(transactionMembers, config);
@@ -72,18 +71,15 @@ export async function sparqlIngest(memberStream, config, sparqlWriter) {
72
71
  sanitizeQuads(store);
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72
  if (ctv.object.value === config.changeSemantics.createValue) {
74
73
  logger.info(`Preparing 'INSERT DATA {}' SPARQL query for member ${memberIRI.value}`);
75
- query = CREATE(store, ng);
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- queryType = "CREATE";
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+ query = CREATE(store, config.maxQueryLength, ng);
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  }
78
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  else if (ctv.object.value === config.changeSemantics.updateValue) {
79
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  logger.info(`Preparing 'DELETE {} INSERT {} WHERE {}' SPARQL query for member ${memberIRI.value}`);
80
- query = UPDATE(store, ng);
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- queryType = "UPDATE";
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+ query = UPDATE(store, config.maxQueryLength, ng);
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  }
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  else if (ctv.object.value === config.changeSemantics.deleteValue) {
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  logger.info(`Preparing 'DELETE WHERE {}' SPARQL query for member ${memberIRI.value}`);
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  query = DELETE(store, [memberIRI.value], config.memberShapes, ng);
86
- queryType = "DELETE";
87
83
  }
88
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  else {
89
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  throw new Error(`[sparqlIngest] Unrecognized change type value: ${ctv.object.value}`);
@@ -95,20 +91,20 @@ export async function sparqlIngest(memberStream, config, sparqlWriter) {
95
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  transactionMembers.forEach(ts => {
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92
  ts.store.getQuads(null, null, null, null).forEach(q => store.addQuad(q));
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93
  });
98
- logger.info(`Preparing 'DELETE {} INSERT {} WHERE {}' SPARQL query for transaction member ${memberIRI.value}`);
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- query = UPDATE(store, config.targetNamedGraph);
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+ logger.info(`Preparing 'DELETE {} WHERE {} + INSERT DATA {}' SPARQL query for transaction member ${memberIRI.value}`);
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+ query = UPDATE(store, config.maxQueryLength, config.targetNamedGraph);
100
96
  }
101
97
  else {
102
98
  const ng = getNamedGraphIfAny(memberIRI, config.memberIsGraph, config.targetNamedGraph);
103
- logger.info(`Preparing 'DELETE {} INSERT {} WHERE {}' SPARQL query for member ${memberIRI.value}`);
104
- query = UPDATE(store, ng);
99
+ logger.info(`Preparing 'DELETE {} WHERE {} + INSERT DATA {}' SPARQL query for member ${memberIRI.value}`);
100
+ query = UPDATE(store, config.maxQueryLength, ng);
105
101
  }
106
102
  }
107
103
  if (query) {
108
104
  logger.debug(`Generated SPARQL query: \n${query}`);
109
105
  if (config.graphStoreUrl) {
110
106
  await doSPARQLRequest(query, config.graphStoreUrl);
111
- logger.info(`Executed ${queryType} on remote SPARQL server ${config.graphStoreUrl} - ${new Date().toISOString()}`);
107
+ logger.info(`Executed query on remote SPARQL server ${config.graphStoreUrl}`);
112
108
  }
113
109
  if (sparqlWriter) {
114
110
  await sparqlWriter.push(query);
@@ -174,10 +170,10 @@ function createTransactionQueries(transactionMembers, config) {
174
170
  }
175
171
  }
176
172
  if (createStore.size > 0) {
177
- transactionQueryBuilder.push(CREATE(createStore, config.targetNamedGraph));
173
+ transactionQueryBuilder.push(CREATE(createStore, config.maxQueryLength, config.targetNamedGraph));
178
174
  }
179
175
  if (updateStore.size > 0) {
180
- transactionQueryBuilder.push(UPDATE(updateStore, config.targetNamedGraph));
176
+ transactionQueryBuilder.push(UPDATE(updateStore, config.maxQueryLength, config.targetNamedGraph));
181
177
  }
182
178
  if (updateStore.size > 0) {
183
179
  transactionQueryBuilder.push(DELETE(deleteStore, deleteMembers, config.memberShapes, config.targetNamedGraph));
package/lib/SPARQLQueries.d.ts CHANGED
@@ -1,4 +1,4 @@
1
1
  import { RdfStore } from "rdf-stores";
2
- export declare const CREATE: (store: RdfStore, namedGraph?: string, multipleNamedGraphs?: boolean) => string;
3
- export declare const UPDATE: (store: RdfStore, namedGraph?: string, multipleNamedGraphs?: boolean) => string;
2
+ export declare const CREATE: (store: RdfStore, maxQueryLength?: number, namedGraph?: string, multipleNamedGraphs?: boolean) => string;
3
+ export declare const UPDATE: (store: RdfStore, maxQueryLength?: number, namedGraph?: string, multipleNamedGraphs?: boolean) => string;
4
4
  export declare const DELETE: (store: RdfStore, memberIRIs: string[], memberShapes?: string[], namedGraph?: string, multipleNamedGraphs?: boolean) => string;
package/lib/SPARQLQueries.js CHANGED
@@ -2,30 +2,42 @@ import { RDF, SHACL } from "@treecg/types";
2
2
  import { Writer as N3Writer, Parser } from "n3";
3
3
  import { RdfStore } from "rdf-stores";
4
4
  import { DataFactory } from "rdf-data-factory";
5
- import { getObjects, getSubjects } from "./Utils.js";
5
+ import { getObjects, getSubjects, splitStore } from "./Utils.js";
6
6
  const df = new DataFactory();
7
- export const CREATE = (store, namedGraph, multipleNamedGraphs) => {
8
- const content = new N3Writer().quadsToString(store.getQuads(null, null, null, null));
7
+ export const CREATE = (store, maxQueryLength = 500, namedGraph, multipleNamedGraphs) => {
8
+ const stores = splitStore(store, maxQueryLength);
9
9
  return `
10
- INSERT DATA {
11
- ${namedGraph ? `GRAPH <${namedGraph}> {${content}}` : `${content}`}
12
- }
10
+ ${stores.map((subStore, i) => {
11
+ return `
12
+ ${namedGraph ? `WITH <${namedGraph}>` : ""}
13
+ INSERT DATA {
14
+ ${new N3Writer().quadsToString(subStore.getQuads())}
15
+ }
16
+ ${i === stores.length - 1 ? "" : ";"}
17
+ `;
18
+ }).join("\n")}
13
19
  `;
14
20
  };
15
- export const UPDATE = (store, namedGraph, multipleNamedGraphs) => {
16
- const formattedQuery = formatDeleteQuery(store);
17
- const content = new N3Writer().quadsToString(store.getQuads(null, null, null, null));
21
+ export const UPDATE = (store, maxQueryLength = 500, namedGraph, multipleNamedGraphs) => {
22
+ const formattedQuery = formatQuery(store);
23
+ const stores = splitStore(store, maxQueryLength);
18
24
  return `
19
25
  ${namedGraph ? `WITH <${namedGraph}>` : ""}
20
26
  DELETE {
21
27
  ${formattedQuery[0]}
22
28
  }
23
- INSERT {
24
- ${content}
25
- }
26
29
  WHERE {
27
30
  ${formattedQuery[0]}
28
- }
31
+ };
32
+ ${stores.map((subStore, i) => {
33
+ return `
34
+ ${namedGraph ? `WITH <${namedGraph}>` : ""}
35
+ INSERT DATA {
36
+ ${new N3Writer().quadsToString(subStore.getQuads())}
37
+ }
38
+ ${i === stores.length - 1 ? "" : ";"}
39
+ `;
40
+ }).join("\n")}
29
41
  `;
30
42
  };
31
43
  export const DELETE = (store, memberIRIs, memberShapes, namedGraph, multipleNamedGraphs) => {
@@ -33,7 +45,7 @@ export const DELETE = (store, memberIRIs, memberShapes, namedGraph, multipleName
33
45
  const whereBuilder = [];
34
46
  let indexStart = 0;
35
47
  for (const memberIRI of memberIRIs) {
36
- const formatted = formatDeleteQuery(store, memberIRI, memberShapes, indexStart);
48
+ const formatted = formatQuery(store, memberIRI, memberShapes, indexStart);
37
49
  deleteBuilder.push(formatted.length > 1 ? formatted[1] : formatted[0]);
38
50
  whereBuilder.push(formatted[0]);
39
51
  indexStart++;
@@ -47,22 +59,24 @@ export const DELETE = (store, memberIRIs, memberShapes, namedGraph, multipleName
47
59
  }
48
60
  `;
49
61
  };
50
- function formatDeleteQuery(memberStore, memberIRI, memberShapes, indexStart = 0) {
62
+ function formatQuery(memberStore, memberIRI, memberShapes, indexStart = 0) {
51
63
  const subjectSet = new Set();
52
64
  const queryBuilder = [];
53
65
  const formattedQueries = [];
54
66
  let i = indexStart;
55
67
  if (!memberShapes || memberShapes.length === 0) {
56
- for (const quad of memberStore.getQuads(null, null, null, null)) {
68
+ for (const quad of memberStore.getQuads()) {
57
69
  if (!subjectSet.has(quad.subject.value)) {
58
70
  subjectSet.add(quad.subject.value);
59
71
  if (quad.subject.termType === "NamedNode") {
60
72
  queryBuilder.push(`<${quad.subject.value}> ?p_${i} ?o_${i}.`);
61
73
  }
62
74
  else if (quad.subject.termType === "BlankNode") {
63
- const bnQ = memberStore.getQuads(null, null, quad.subject, null)[0];
64
- queryBuilder.push(`<${bnQ.subject.value}> <${bnQ.predicate.value}> ?bn_${i}.`);
65
- queryBuilder.push(`?bn_${i} ?p_${i} ?o${i}.`);
75
+ queryBuilder.push(`?bn_${i} <${quad.predicate.value}> ${quad.object.termType === "Literal" ? `"${quad.object.value}"^^<${quad.object.datatype.value}>`
76
+ : quad.object.termType === "BlankNode" ? `?bn_ref_${i}`
77
+ : `<${quad.object.value}>`}.`);
78
+ queryBuilder.push(`?bn_${i} ?p_${i} ?o_${i}.`);
79
+ queryBuilder.push(`?s_ref_${i} ?p_ref_${i} ?bn_${i}.`);
66
80
  }
67
81
  i++;
68
82
  }
@@ -77,7 +91,7 @@ function formatDeleteQuery(memberStore, memberIRI, memberShapes, indexStart = 0)
77
91
  shapeIndex.set(extractMainTargetClass(shapeStore).value, shapeStore);
78
92
  });
79
93
  queryBuilder.push(`<${memberIRI}> ?p_${i} ?o_${i}.`);
80
- const memberType = getObjects(memberStore, df.namedNode(memberIRI), RDF.terms.type, null)[0];
94
+ const memberType = getObjects(memberStore, df.namedNode(memberIRI), RDF.terms.type)[0];
81
95
  if (memberType) {
82
96
  i++;
83
97
  const mshStore = shapeIndex.get(memberType.value);
package/lib/Utils.d.ts CHANGED
@@ -2,5 +2,6 @@ import { RdfStore } from "rdf-stores";
2
2
  import type { Term, Quad_Subject, Quad_Object } from "@rdfjs/types";
3
3
  export declare function getSubjects(store: RdfStore, predicate: Term | null, object: Term | null, graph?: Term | null): Quad_Subject[];
4
4
  export declare function getObjects(store: RdfStore, subject: Term | null, predicate: Term | null, graph?: Term | null): Quad_Object[];
5
+ export declare function splitStore(store: RdfStore, threshold: number): RdfStore[];
5
6
  export declare function sanitizeQuads(store: RdfStore): void;
6
7
  export declare function doSPARQLRequest(query: string, url: string): Promise<void>;
package/lib/Utils.js CHANGED
@@ -1,5 +1,7 @@
1
1
  import { XSD } from "@treecg/types";
2
2
  import { DataFactory } from "rdf-data-factory";
3
+ import { RdfStore } from "rdf-stores";
4
+ import { getLoggerFor } from "./LogUtil.js";
3
5
  const df = new DataFactory();
4
6
  export function getSubjects(store, predicate, object, graph) {
5
7
  return store.getQuads(null, predicate, object, graph).map((quad) => {
@@ -11,6 +13,45 @@ export function getObjects(store, subject, predicate, graph) {
11
13
  return quad.object;
12
14
  });
13
15
  }
16
+ export function splitStore(store, threshold) {
17
+ const stores = [];
18
+ if (store.size < threshold) {
19
+ stores.push(store);
20
+ }
21
+ else {
22
+ const quads = store.getQuads();
23
+ const bnSet = new Set();
24
+ let subStore = RdfStore.createDefault();
25
+ for (let i = 0; i < quads.length; i++) {
26
+ if (bnSet.has(`${quads[i].subject.value}${quads[i].predicate.value}${quads[i].object.value}${quads[i].graph.value}`)) {
27
+ continue;
28
+ }
29
+ if (subStore.size >= threshold) {
30
+ stores.push(subStore);
31
+ subStore = RdfStore.createDefault();
32
+ }
33
+ if (quads[i].subject.termType === "BlankNode") {
34
+ const subjectQuads = store.getQuads(quads[i].subject);
35
+ const objectQuads = store.getQuads(null, null, quads[i].subject);
36
+ [...subjectQuads, ...objectQuads].forEach((q) => {
37
+ subStore.addQuad(q);
38
+ bnSet.add(`${q.subject.value}${q.predicate.value}${q.object.value}${q.graph.value}`);
39
+ });
40
+ }
41
+ if (quads[i].object.termType === "BlankNode") {
42
+ const subjectQuads = store.getQuads(quads[i].object);
43
+ const objectQuads = store.getQuads(null, null, quads[i].object);
44
+ [...subjectQuads, ...objectQuads].forEach((q) => {
45
+ subStore.addQuad(q);
46
+ bnSet.add(`${q.subject.value}${q.predicate.value}${q.object.value}${q.graph.value}`);
47
+ });
48
+ }
49
+ subStore.addQuad(quads[i]);
50
+ }
51
+ stores.push(subStore);
52
+ }
53
+ return stores;
54
+ }
14
55
  export function sanitizeQuads(store) {
15
56
  for (const q of store.getQuads()) {
16
57
  if (q.object.termType === "Literal" && q.object.datatype.value === XSD.integer) {
@@ -22,15 +63,22 @@ export function sanitizeQuads(store) {
22
63
  }
23
64
  }
24
65
  export async function doSPARQLRequest(query, url) {
25
- const res = await fetch(url, {
26
- method: "POST",
27
- headers: {
28
- 'Content-Type': 'application/x-www-form-urlencoded; charset=UTF-8',
29
- },
30
- body: `update=${fixedEncodeURIComponent(query)}`
31
- });
32
- if (!res.ok) {
33
- throw new Error(`HTTP request failed with code ${res.status} and message: \n${await res.text()}`);
66
+ const logger = getLoggerFor("doSPARQLRequest");
67
+ try {
68
+ const res = await fetch(url, {
69
+ method: "POST",
70
+ headers: {
71
+ 'Content-Type': 'application/x-www-form-urlencoded; charset=UTF-8',
72
+ },
73
+ body: `update=${fixedEncodeURIComponent(query)}`
74
+ });
75
+ if (!res.ok) {
76
+ throw new Error(`HTTP request failed with code ${res.status} and message: \n${await res.text()}`);
77
+ }
78
+ }
79
+ catch (err) {
80
+ logger.error(`Error while executing SPARQL request: ${err.message}`);
81
+ throw err;
34
82
  }
35
83
  }
36
84
  function fixedEncodeURIComponent(str) {
package/lib/tsconfig.tsbuildinfo CHANGED
@@ -1 +1 @@
1
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package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@rdfc/sparql-ingest-processor-ts",
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- "version": "0.4.0",
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+ "version": "0.4.2",
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  "description": "SPARQL Update function to be within RDF-Connect pipelines",
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  "author": "Julián Rojas",
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  "type": "module",
@@ -31,21 +31,21 @@
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  "winston": "^3.17.0"
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  },
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  "devDependencies": {
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- "@comunica/query-sparql": "^4.2.0",
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+ "@comunica/query-sparql": "^4.3.0",
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  "@rdfc/js-runner": "^1.0.0",
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  "@rdfjs/types": "^2.0.1",
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- "@types/node": "^22.15.29",
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- "@typescript-eslint/eslint-plugin": "^8.33.1",
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- "@typescript-eslint/parser": "^8.33.1",
41
- "@vitest/coverage-v8": "^3.2.1",
42
- "eslint": "^9.28.0",
37
+ "@types/n3": "^1.26.0",
38
+ "@types/node": "^24.0.13",
39
+ "@typescript-eslint/eslint-plugin": "^8.37.0",
40
+ "@typescript-eslint/parser": "^8.37.0",
41
+ "@vitest/coverage-v8": "^3.2.4",
42
+ "eslint": "^9.31.0",
43
43
  "eslint-config-prettier": "^10.1.5",
44
44
  "husky": "^9.1.7",
45
45
  "ts-patch": "^3.3.0",
46
46
  "tsc-alias": "^1.8.16",
47
47
  "typescript": "^5.8.3",
48
48
  "vite-tsconfig-paths": "^5.1.4",
49
- "vitest": "^3.2.1"
49
+ "vitest": "^3.2.4"
50
50
  }
51
51
  }
package/processors.ttl CHANGED
@@ -85,6 +85,12 @@ js:SPARQLIngest a js:JsProcess;
85
85
  sh:name "graphStoreUrl";
86
86
  sh:maxCount 1;
87
87
  sh:minCount 0;
88
+ ], [
89
+ sh:path js:maxQueryLength;
90
+ sh:datatype xsd:integer;
91
+ sh:name "maxQueryLength";
92
+ sh:maxCount 1;
93
+ sh:minCount 0;
88
94
  ].
89
95
 
90
96
  [ ] a sh:NodeShape;