@rcsb/rcsb-saguaro-app 6.4.0 → 6.4.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/build/app.js +1 -1
- package/build/plot.js +1 -1
- package/build/worker.js +1 -1
- package/lib/RcsbCollectTools/DataCollectors/EntryAssembliesCollector.js +1 -1
- package/lib/RcsbCollectTools/DataCollectors/EntryAssembliesCollector.js.map +1 -1
- package/lib/RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector.js +1 -1
- package/lib/RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector.js.map +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/EntryAssembliesCollector.js +1 -1
- package/lib/commonjs/RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector.js +1 -1
- package/package.json +3 -3
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@@ -59,7 +59,7 @@ export class EntryAssembliesCollector {
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asymId: o.asym_id,
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authId: o.auth_asym_id,
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authResId: o.auth_to_entity_poly_seq_mapping,
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-
name: (_m = ((
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name: (_m = ((_g = (_f = (_e = instance.polymer_entity) === null || _e === void 0 ? void 0 : _e.rcsb_polymer_entity) === null || _f === void 0 ? void 0 : _f.pdbx_description) !== null && _g !== void 0 ? _g : (_l = (_k = (_j = (_h = instance.polymer_entity) === null || _h === void 0 ? void 0 : _h.rcsb_polymer_entity) === null || _j === void 0 ? void 0 : _j.rcsb_polymer_name_combined) === null || _k === void 0 ? void 0 : _k.names) === null || _l === void 0 ? void 0 : _l.join(", "))) !== null && _m !== void 0 ? _m : "NA",
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taxNames: Array.from(taxIds),
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experimentalMethod: (_q = (_p = (_o = instance.polymer_entity) === null || _o === void 0 ? void 0 : _o.entry) === null || _p === void 0 ? void 0 : _p.rcsb_entry_info.experimental_method) !== null && _q !== void 0 ? _q : "NA",
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resolution: (_u = (_t = (_s = (_r = instance.polymer_entity) === null || _r === void 0 ? void 0 : _r.entry) === null || _s === void 0 ? void 0 : _s.rcsb_entry_info.resolution_combined) === null || _t === void 0 ? void 0 : _t[0]) !== null && _u !== void 0 ? _u : undefined,
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"EntryAssembliesCollector.js","sourceRoot":"","sources":["../../../src/RcsbCollectTools/DataCollectors/EntryAssembliesCollector.ts"],"names":[],"mappings":";AAAA,OAAO,EAAC,UAAU,EAAa,MAAM,8BAA8B,CAAC;AAQpE,OAAO,EAAC,UAAU,EAAC,MAAM,oCAAoC,CAAC;AAE9D,IAAO,wBAAwB,GAAG,UAAU,CAAC,wBAAwB,CAAC;AACtE,IAAO,aAAa,GAAG,UAAU,CAAC,aAAa,CAAC;AAEhD,MAAM,OAAO,wBAAwB;IAArC;QAEqB,gBAAW,GAAe,UAAU,CAAC;IAgF1D,CAAC;IA7EgB,OAAO,CAAC,aAA6B;;YAC9C,IAAG,CAAC;gBACA,MAAM,SAAS,GAAc,MAAM,IAAI,CAAC,WAAW,CAAC,sBAAsB,CAAC,aAAa,CAAC,CAAC;gBAC1F,OAAO,wBAAwB,CAAC,kBAAkB,CAAC,SAAS,CAAC,CAAC;YAClE,CAAC;YAAA,OAAO,KAAK,EAAC,CAAC;gBACX,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;gBACnB,MAAM,KAAK,CAAC;YAChB,CAAC;QACL,CAAC;KAAA;IAEO,MAAM,CAAC,kBAAkB,CAAC,KAAgB;QAC9C,MAAM,GAAG,GAAsD,IAAI,GAAG,EAAgD,CAAC;QACvH,GAAG,CAAC,GAAG,CAAC,wBAAwB,CAAC,QAAQ,EAAE,IAAI,KAAK,EAAkC,CAAC,CAAC;QACxF,MAAM,eAAe,GAAgD,IAAI,GAAG,EAA0C,CAAC;QACvH,IAAG,CAAA,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,gBAAgB,aAAY,KAAK,EAAC,CAAC;YACzC,KAAK,CAAC,gBAAgB,CAAC,OAAO,CAAC,MAAM,CAAA,EAAE;gBACnC,IAAG,CAAA,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,wBAAwB,KAAI,KAAK,CAAC,OAAO,CAAC,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,wBAAwB,CAAC,EAAC,CAAC;oBACpF,wBAAwB,CAAC,MAAM,CAAC,wBAAwB,CAAC,CAAC;oBAC1D,wBAAwB,CAAC,2BAA2B,CAAC,MAAM,CAAC,wBAAwB,EAAE,eAAe,EAAE,GAAG,CAAC,CAAC;gBAChH,CAAC;YACL,CAAC,CAAC,CAAA;QACN,CAAC;QACD,IAAG,CAAA,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,UAAU,aAAY,KAAK,EAAC,CAAC;YACnC,KAAK,CAAC,UAAU,CAAC,OAAO,CAAC,QAAQ,CAAA,EAAE;gBAC/B,IAAG,QAAQ;oBACP,wBAAwB,CAAC,4BAA4B,CAAC,QAAQ,EAAE,eAAe,EAAE,GAAG,CAAC,CAAC;YAC9F,CAAC,CAAC,CAAC;QACP,CAAC;QACD,OAAO,GAAG,CAAC;IACf,CAAC;IAEO,MAAM,CAAC,2BAA2B,CAAC,sBAAwD,EAAE,eAA4D,EAAE,GAAsD;QACrN,sBAAsB,CAAC,OAAO,CAAC,QAAQ,CAAA,EAAE;;YACrC,MAAM,MAAM,GAAgB,IAAI,GAAG,EAAU,CAAC;YAC9C,IAAG,CAAA,MAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,cAAc,0CAAE,2BAA2B,aAAY,KAAK;gBACrE,QAAQ,CAAC,cAAc,CAAC,2BAA2B,CAAC,OAAO,CAAC,EAAE,CAAA,EAAE;oBAC5D,IAAG,OAAO,CAAA,EAAE,aAAF,EAAE,uBAAF,EAAE,CAAE,oBAAoB,CAAA,KAAK,QAAQ,IAAI,EAAE,CAAC,oBAAoB,CAAC,MAAM,GAAG,CAAC;wBACjF,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,oBAAoB,CAAC,CAAC;gBAC5C,CAAC,CAAC,CAAC;YACP,MAAM,CAAC,GAAG,QAAQ,CAAC,kDAAkD,CAAC;YACtE,aAAa,CAAC,CAAC,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,QAAQ,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,SAAS,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,SAAS,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,OAAO,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,YAAY,CAAC,EAAE,wBAAwB,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,+BAA+B,CAAC,CAAA;YAC/N,aAAa,CAAC,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,WAAW,0CAAE,2BAA2B,CAAC,CAAC;YACjF,aAAa,CAAC,MAAA,QAAQ,CAAC,cAAc,CAAC,KAAK,0CAAE,eAAe,CAAC,mCAAmC,CAAC,CAAC;YAClG,MAAM,CAAC,GAAmC;gBACtC,MAAM,EAAE,QAAQ,CAAC,OAAO;gBACxB,OAAO,EAAE,CAAC,CAAC,QAAQ;gBACnB,QAAQ,EAAE,CAAC,CAAC,SAAS;gBACrB,MAAM,EAAE,CAAC,CAAC,OAAO;gBACjB,MAAM,EAAE,CAAC,CAAC,YAAY;gBACtB,SAAS,EAAE,CAAC,CAAC,+BAA+B;gBAC5C,IAAI,EAAE,MAAA,CAAC,MAAA,MAAA,MAAA,
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1
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{"version":3,"file":"EntryAssembliesCollector.js","sourceRoot":"","sources":["../../../src/RcsbCollectTools/DataCollectors/EntryAssembliesCollector.ts"],"names":[],"mappings":";AAAA,OAAO,EAAC,UAAU,EAAa,MAAM,8BAA8B,CAAC;AAQpE,OAAO,EAAC,UAAU,EAAC,MAAM,oCAAoC,CAAC;AAE9D,IAAO,wBAAwB,GAAG,UAAU,CAAC,wBAAwB,CAAC;AACtE,IAAO,aAAa,GAAG,UAAU,CAAC,aAAa,CAAC;AAEhD,MAAM,OAAO,wBAAwB;IAArC;QAEqB,gBAAW,GAAe,UAAU,CAAC;IAgF1D,CAAC;IA7EgB,OAAO,CAAC,aAA6B;;YAC9C,IAAG,CAAC;gBACA,MAAM,SAAS,GAAc,MAAM,IAAI,CAAC,WAAW,CAAC,sBAAsB,CAAC,aAAa,CAAC,CAAC;gBAC1F,OAAO,wBAAwB,CAAC,kBAAkB,CAAC,SAAS,CAAC,CAAC;YAClE,CAAC;YAAA,OAAO,KAAK,EAAC,CAAC;gBACX,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;gBACnB,MAAM,KAAK,CAAC;YAChB,CAAC;QACL,CAAC;KAAA;IAEO,MAAM,CAAC,kBAAkB,CAAC,KAAgB;QAC9C,MAAM,GAAG,GAAsD,IAAI,GAAG,EAAgD,CAAC;QACvH,GAAG,CAAC,GAAG,CAAC,wBAAwB,CAAC,QAAQ,EAAE,IAAI,KAAK,EAAkC,CAAC,CAAC;QACxF,MAAM,eAAe,GAAgD,IAAI,GAAG,EAA0C,CAAC;QACvH,IAAG,CAAA,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,gBAAgB,aAAY,KAAK,EAAC,CAAC;YACzC,KAAK,CAAC,gBAAgB,CAAC,OAAO,CAAC,MAAM,CAAA,EAAE;gBACnC,IAAG,CAAA,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,wBAAwB,KAAI,KAAK,CAAC,OAAO,CAAC,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,wBAAwB,CAAC,EAAC,CAAC;oBACpF,wBAAwB,CAAC,MAAM,CAAC,wBAAwB,CAAC,CAAC;oBAC1D,wBAAwB,CAAC,2BAA2B,CAAC,MAAM,CAAC,wBAAwB,EAAE,eAAe,EAAE,GAAG,CAAC,CAAC;gBAChH,CAAC;YACL,CAAC,CAAC,CAAA;QACN,CAAC;QACD,IAAG,CAAA,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,UAAU,aAAY,KAAK,EAAC,CAAC;YACnC,KAAK,CAAC,UAAU,CAAC,OAAO,CAAC,QAAQ,CAAA,EAAE;gBAC/B,IAAG,QAAQ;oBACP,wBAAwB,CAAC,4BAA4B,CAAC,QAAQ,EAAE,eAAe,EAAE,GAAG,CAAC,CAAC;YAC9F,CAAC,CAAC,CAAC;QACP,CAAC;QACD,OAAO,GAAG,CAAC;IACf,CAAC;IAEO,MAAM,CAAC,2BAA2B,CAAC,sBAAwD,EAAE,eAA4D,EAAE,GAAsD;QACrN,sBAAsB,CAAC,OAAO,CAAC,QAAQ,CAAA,EAAE;;YACrC,MAAM,MAAM,GAAgB,IAAI,GAAG,EAAU,CAAC;YAC9C,IAAG,CAAA,MAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,cAAc,0CAAE,2BAA2B,aAAY,KAAK;gBACrE,QAAQ,CAAC,cAAc,CAAC,2BAA2B,CAAC,OAAO,CAAC,EAAE,CAAA,EAAE;oBAC5D,IAAG,OAAO,CAAA,EAAE,aAAF,EAAE,uBAAF,EAAE,CAAE,oBAAoB,CAAA,KAAK,QAAQ,IAAI,EAAE,CAAC,oBAAoB,CAAC,MAAM,GAAG,CAAC;wBACjF,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,oBAAoB,CAAC,CAAC;gBAC5C,CAAC,CAAC,CAAC;YACP,MAAM,CAAC,GAAG,QAAQ,CAAC,kDAAkD,CAAC;YACtE,aAAa,CAAC,CAAC,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,QAAQ,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,SAAS,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,SAAS,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,OAAO,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,YAAY,CAAC,EAAE,wBAAwB,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,+BAA+B,CAAC,CAAA;YAC/N,aAAa,CAAC,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,WAAW,0CAAE,2BAA2B,CAAC,CAAC;YACjF,aAAa,CAAC,MAAA,QAAQ,CAAC,cAAc,CAAC,KAAK,0CAAE,eAAe,CAAC,mCAAmC,CAAC,CAAC;YAClG,MAAM,CAAC,GAAmC;gBACtC,MAAM,EAAE,QAAQ,CAAC,OAAO;gBACxB,OAAO,EAAE,CAAC,CAAC,QAAQ;gBACnB,QAAQ,EAAE,CAAC,CAAC,SAAS;gBACrB,MAAM,EAAE,CAAC,CAAC,OAAO;gBACjB,MAAM,EAAE,CAAC,CAAC,YAAY;gBACtB,SAAS,EAAE,CAAC,CAAC,+BAA+B;gBAC5C,IAAI,EAAE,MAAA,CAAC,MAAA,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,mBAAmB,0CAAE,gBAAgB,mCAAI,MAAA,MAAA,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,mBAAmB,0CAAE,0BAA0B,0CAAE,KAAK,0CAAE,IAAI,CAAC,IAAI,CAAC,CAAC,mCAAI,IAAI;gBAC7K,QAAQ,EAAC,KAAK,CAAC,IAAI,CAAC,MAAM,CAAC;gBAC3B,kBAAkB,EAAE,MAAA,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,KAAK,0CAAE,eAAe,CAAC,mBAAmB,mCAAI,IAAI;gBAC/F,UAAU,EAAE,MAAA,MAAA,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,KAAK,0CAAE,eAAe,CAAC,mBAAmB,0CAAG,CAAC,CAAC,mCAAI,SAAS;gBACjG,cAAc,EAAE,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,WAAW,0CAAE,2BAA2B;gBACjF,qBAAqB,EAAE,MAAA,MAAA,QAAQ,CAAC,cAAc,CAAC,mBAAmB,0CAAE,cAAc,mCAAI,SAAS;gBAC/F,oBAAoB,EAAE,MAAA,MAAA,QAAQ,CAAC,cAAc,CAAC,KAAK,0CAAE,eAAe,CAAC,gBAAgB,mCAAI,SAAS;gBAClG,iCAAiC,EAAE,QAAQ,CAAC,cAAc,CAAC,KAAK,CAAC,eAAe,CAAC,mCAAwE;aAC5J,CAAC;YACF,MAAA,GAAG,CAAC,GAAG,CAAC,wBAAwB,CAAC,QAAQ,CAAC,0CAAE,IAAI,CAAC,CAAC,CAAC,CAAC;YACpD,IAAG,MAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,kDAAkD,0CAAE,OAAO;gBACpE,eAAe,CAAC,GAAG,CAAC,MAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,kDAAkD,0CAAE,OAAO,EAAE,CAAC,CAAC,CAAC;QACtG,CAAC,CAAC,CAAC;IACP,CAAC;IAEO,MAAM,CAAC,4BAA4B,CAAC,QAAsB,EAAE,eAA4D,EAAE,GAAsD;;QACpL,GAAG,CAAC,GAAG,CAAC,QAAQ,CAAC,mCAAmC,CAAC,WAAW,EAAE,IAAI,KAAK,EAAkC,CAAC,CAAC;QAC/G,MAAA,QAAQ,CAAC,wBAAwB,0CAAE,OAAO,CAAC,WAAW,CAAA,EAAE;;YACpD,MAAA,WAAW,aAAX,WAAW,uBAAX,WAAW,CAAE,YAAY,0CAAE,OAAO,CAAC,MAAM,CAAA,EAAE;;gBACvC,IAAG,CAAC,MAAM;oBACN,OAAM;gBACV,MAAM,CAAC,GAAG,eAAe,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;gBACtC,IAAG,CAAC;oBACA,MAAA,GAAG,CAAC,GAAG,CAAC,QAAQ,CAAC,mCAAmC,CAAC,WAAW,CAAC,0CAAE,IAAI,CAAC,CAAC,CAAC,CAAA;YAClF,CAAC,CAAC,CAAC;QACP,CAAC,CAAC,CAAA;IACN,CAAC;;AA9Ee,iCAAQ,GAAW,OAAO,AAAlB,CAAmB"}
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@@ -53,7 +53,7 @@ export class PolymerEntityInstancesCollector {
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asymId: o.asym_id,
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authId: o.auth_asym_id,
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authResId: o.auth_to_entity_poly_seq_mapping,
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name: (_o = ((
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name: (_o = ((_h = (_g = (_f = instance === null || instance === void 0 ? void 0 : instance.polymer_entity) === null || _f === void 0 ? void 0 : _f.rcsb_polymer_entity) === null || _g === void 0 ? void 0 : _g.pdbx_description) !== null && _h !== void 0 ? _h : (_m = (_l = (_k = (_j = instance.polymer_entity) === null || _j === void 0 ? void 0 : _j.rcsb_polymer_entity) === null || _k === void 0 ? void 0 : _k.rcsb_polymer_name_combined) === null || _l === void 0 ? void 0 : _l.names) === null || _m === void 0 ? void 0 : _m.join(", "))) !== null && _o !== void 0 ? _o : "NA",
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taxNames: Array.from(taxIds),
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experimentalMethod: (_p = p.rcsb_entry_info.experimental_method) !== null && _p !== void 0 ? _p : "NA",
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resolution: (_t = (_s = (_r = (_q = instance.polymer_entity) === null || _q === void 0 ? void 0 : _q.entry) === null || _r === void 0 ? void 0 : _r.rcsb_entry_info.resolution_combined) === null || _s === void 0 ? void 0 : _s[0]) !== null && _t !== void 0 ? _t : undefined,
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-
{"version":3,"file":"PolymerEntityInstancesCollector.js","sourceRoot":"","sources":["../../../src/RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector.ts"],"names":[],"mappings":";AAAA,OAAO,EAAC,UAAU,EAAa,MAAM,8BAA8B,CAAC;AAGpE,OAAO,EAAC,UAAU,EAAC,MAAM,oCAAoC,CAAC;AAC9D,IAAO,wBAAwB,GAAG,UAAU,CAAC,wBAAwB,CAAC;AACtE,IAAO,aAAa,GAAG,UAAU,CAAC,aAAa,CAAC;AAmBhD,MAAM,OAAO,+BAA+B;IAA5C;QAEqB,gBAAW,GAAe,UAAU,CAAC;IA0D1D,CAAC;IAxDgB,OAAO,CAAC,aAA6B;;YAC9C,IAAI,CAAC;gBACD,MAAM,MAAM,GAAc,MAAM,IAAI,CAAC,WAAW,CAAC,sBAAsB,CAAC,aAAa,CAAC,CAAC;gBACvF,OAAO,+BAA+B,CAAC,iBAAiB,CAAC,MAAM,CAAC,CAAC;YACrE,CAAC;YAAA,OAAO,KAAK,EAAE,CAAC;gBACZ,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;gBACnB,MAAM,KAAK,CAAC;YAChB,CAAC;QACL,CAAC;KAAA;IAEO,MAAM,CAAC,iBAAiB,CAAC,KAAgB;QAC7C,MAAM,GAAG,GAA0C,IAAI,KAAK,EAAkC,CAAC;QAC/F,IAAG,CAAA,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,gBAAgB,aAAY,KAAK,EAAC,CAAC;YACzC,KAAK,CAAC,gBAAgB,CAAC,OAAO,CAAC,MAAM,CAAA,EAAE;gBACnC,IAAG,MAAM,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,wBAAwB,CAAC,EAAC,CAAC;oBAC1D,wBAAwB,CAAC,MAAM,CAAC,wBAAwB,CAAC,CAAC;oBAC1D,+BAA+B,CAAC,2BAA2B,CAAC,MAAM,CAAC,wBAAwB,EAAE,GAAG,CAAC,CAAC;gBACtG,CAAC;YACL,CAAC,CAAC,CAAA;QACN,CAAC;QACD,OAAO,GAAG,CAAC;IACf,CAAC;IAED,MAAM,CAAC,2BAA2B,CAAC,sBAAwD,EAAE,GAA0C;QACnI,sBAAsB,CAAC,OAAO,CAAC,QAAQ,CAAA,EAAE;;YACrC,MAAM,MAAM,GAAgB,IAAI,GAAG,EAAU,CAAC;YAC9C,IAAG,CAAA,MAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,cAAc,0CAAE,2BAA2B,aAAY,KAAK;gBACrE,QAAQ,CAAC,cAAc,CAAC,2BAA2B,CAAC,OAAO,CAAC,EAAE,CAAA,EAAE;oBAC5D,IAAG,OAAO,CAAA,EAAE,aAAF,EAAE,uBAAF,EAAE,CAAE,oBAAoB,CAAA,KAAK,QAAQ,IAAI,EAAE,CAAC,oBAAoB,CAAC,MAAM,GAAG,CAAC;wBACjF,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,oBAAoB,CAAC,CAAC;gBAC5C,CAAC,CAAC,CAAC;YACP,MAAM,CAAC,GAAG,QAAQ,CAAC,kDAAkD,CAAC;YACtE,MAAM,CAAC,GAAG,MAAA,QAAQ,CAAC,cAAc,0CAAE,KAAK,CAAC;YACzC,aAAa,CAAC,CAAC,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,SAAS,CAAC,EAAE,aAAa,CAAC,CAAC,CAAC,YAAY,CAAC,EAAE,wBAAwB,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,+BAA+B,CAAC,CAAC;YAC3I,aAAa,CAAC,CAAC,CAAC,CAAC;YACjB,aAAa,CAAC,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,WAAW,0CAAE,2BAA2B,CAAC,CAAC;YACjF,aAAa,CAAC,MAAA,QAAQ,CAAC,cAAc,CAAC,KAAK,0CAAE,eAAe,CAAC,mCAAmC,CAAC,CAAC;YAClG,GAAG,CAAC,IAAI,CAAC;gBACL,MAAM,EAAE,QAAQ,CAAC,OAAO;gBACxB,OAAO,EAAE,CAAC,CAAC,QAAQ;gBACnB,QAAQ,EAAE,CAAC,CAAC,SAAS;gBACrB,MAAM,EAAE,CAAC,CAAC,OAAO;gBACjB,MAAM,EAAE,CAAC,CAAC,YAAY;gBACtB,SAAS,EAAE,CAAC,CAAC,+BAA+B;gBAC5C,IAAI,EAAE,MAAA,CAAC,MAAA,MAAA,MAAA,
|
|
1
|
+
{"version":3,"file":"PolymerEntityInstancesCollector.js","sourceRoot":"","sources":["../../../src/RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector.ts"],"names":[],"mappings":";AAAA,OAAO,EAAC,UAAU,EAAa,MAAM,8BAA8B,CAAC;AAGpE,OAAO,EAAC,UAAU,EAAC,MAAM,oCAAoC,CAAC;AAC9D,IAAO,wBAAwB,GAAG,UAAU,CAAC,wBAAwB,CAAC;AACtE,IAAO,aAAa,GAAG,UAAU,CAAC,aAAa,CAAC;AAmBhD,MAAM,OAAO,+BAA+B;IAA5C;QAEqB,gBAAW,GAAe,UAAU,CAAC;IA0D1D,CAAC;IAxDgB,OAAO,CAAC,aAA6B;;YAC9C,IAAI,CAAC;gBACD,MAAM,MAAM,GAAc,MAAM,IAAI,CAAC,WAAW,CAAC,sBAAsB,CAAC,aAAa,CAAC,CAAC;gBACvF,OAAO,+BAA+B,CAAC,iBAAiB,CAAC,MAAM,CAAC,CAAC;YACrE,CAAC;YAAA,OAAO,KAAK,EAAE,CAAC;gBACZ,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC;gBACnB,MAAM,KAAK,CAAC;YAChB,CAAC;QACL,CAAC;KAAA;IAEO,MAAM,CAAC,iBAAiB,CAAC,KAAgB;QAC7C,MAAM,GAAG,GAA0C,IAAI,KAAK,EAAkC,CAAC;QAC/F,IAAG,CAAA,KAAK,aAAL,KAAK,uBAAL,KAAK,CAAE,gBAAgB,aAAY,KAAK,EAAC,CAAC;YACzC,KAAK,CAAC,gBAAgB,CAAC,OAAO,CAAC,MAAM,CAAA,EAAE;gBACnC,IAAG,MAAM,IAAI,KAAK,CAAC,OAAO,CAAC,MAAM,aAAN,MAAM,uBAAN,MAAM,CAAE,wBAAwB,CAAC,EAAC,CAAC;oBAC1D,wBAAwB,CAAC,MAAM,CAAC,wBAAwB,CAAC,CAAC;oBAC1D,+BAA+B,CAAC,2BAA2B,CAAC,MAAM,CAAC,wBAAwB,EAAE,GAAG,CAAC,CAAC;gBACtG,CAAC;YACL,CAAC,CAAC,CAAA;QACN,CAAC;QACD,OAAO,GAAG,CAAC;IACf,CAAC;IAED,MAAM,CAAC,2BAA2B,CAAC,sBAAwD,EAAE,GAA0C;QACnI,sBAAsB,CAAC,OAAO,CAAC,QAAQ,CAAA,EAAE;;YACrC,MAAM,MAAM,GAAgB,IAAI,GAAG,EAAU,CAAC;YAC9C,IAAG,CAAA,MAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,cAAc,0CAAE,2BAA2B,aAAY,KAAK;gBACrE,QAAQ,CAAC,cAAc,CAAC,2BAA2B,CAAC,OAAO,CAAC,EAAE,CAAA,EAAE;oBAC5D,IAAG,OAAO,CAAA,EAAE,aAAF,EAAE,uBAAF,EAAE,CAAE,oBAAoB,CAAA,KAAK,QAAQ,IAAI,EAAE,CAAC,oBAAoB,CAAC,MAAM,GAAG,CAAC;wBACjF,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,oBAAoB,CAAC,CAAC;gBAC5C,CAAC,CAAC,CAAC;YACP,MAAM,CAAC,GAAG,QAAQ,CAAC,kDAAkD,CAAC;YACtE,MAAM,CAAC,GAAG,MAAA,QAAQ,CAAC,cAAc,0CAAE,KAAK,CAAC;YACzC,aAAa,CAAC,CAAC,CAAC,EAAE,aAAa,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,SAAS,CAAC,EAAE,aAAa,CAAC,CAAC,CAAC,YAAY,CAAC,EAAE,wBAAwB,CAAC,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,+BAA+B,CAAC,CAAC;YAC3I,aAAa,CAAC,CAAC,CAAC,CAAC;YACjB,aAAa,CAAC,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,WAAW,0CAAE,2BAA2B,CAAC,CAAC;YACjF,aAAa,CAAC,MAAA,QAAQ,CAAC,cAAc,CAAC,KAAK,0CAAE,eAAe,CAAC,mCAAmC,CAAC,CAAC;YAClG,GAAG,CAAC,IAAI,CAAC;gBACL,MAAM,EAAE,QAAQ,CAAC,OAAO;gBACxB,OAAO,EAAE,CAAC,CAAC,QAAQ;gBACnB,QAAQ,EAAE,CAAC,CAAC,SAAS;gBACrB,MAAM,EAAE,CAAC,CAAC,OAAO;gBACjB,MAAM,EAAE,CAAC,CAAC,YAAY;gBACtB,SAAS,EAAE,CAAC,CAAC,+BAA+B;gBAC5C,IAAI,EAAE,MAAA,CAAC,MAAA,MAAA,MAAA,QAAQ,aAAR,QAAQ,uBAAR,QAAQ,CAAE,cAAc,0CAAE,mBAAmB,0CAAE,gBAAgB,mCAAI,MAAA,MAAA,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,mBAAmB,0CAAE,0BAA0B,0CAAE,KAAK,0CAAE,IAAI,CAAC,IAAI,CAAC,CAAC,mCAAI,IAAI;gBAC9K,QAAQ,EAAC,KAAK,CAAC,IAAI,CAAC,MAAM,CAAC;gBAC3B,kBAAkB,EAAE,MAAA,CAAC,CAAC,eAAe,CAAC,mBAAmB,mCAAI,IAAI;gBACjE,UAAU,EAAE,MAAA,MAAA,MAAA,MAAA,QAAQ,CAAC,cAAc,0CAAE,KAAK,0CAAE,eAAe,CAAC,mBAAmB,0CAAG,CAAC,CAAC,mCAAI,SAAS;gBACjG,cAAc,EAAE,QAAQ,CAAC,cAAc,CAAC,WAAW,CAAC,2BAA2B;gBAC/E,qBAAqB,EAAE,MAAA,MAAA,QAAQ,CAAC,cAAc,CAAC,mBAAmB,0CAAE,cAAc,mCAAI,SAAS;gBAC/F,oBAAoB,EAAE,MAAA,MAAA,QAAQ,CAAC,cAAc,CAAC,KAAK,0CAAE,eAAe,CAAC,gBAAgB,mCAAI,SAAS;gBAClG,iCAAiC,EAAE,QAAQ,CAAC,cAAc,CAAC,KAAK,CAAC,eAAe,CAAC,mCAAwE;aAC5J,CAAC,CAAC;QACP,CAAC,CAAC,CAAC;IACP,CAAC;CAEJ"}
|
|
@@ -62,7 +62,7 @@ class EntryAssembliesCollector {
|
|
|
62
62
|
asymId: o.asym_id,
|
|
63
63
|
authId: o.auth_asym_id,
|
|
64
64
|
authResId: o.auth_to_entity_poly_seq_mapping,
|
|
65
|
-
name: (_m = ((
|
|
65
|
+
name: (_m = ((_g = (_f = (_e = instance.polymer_entity) === null || _e === void 0 ? void 0 : _e.rcsb_polymer_entity) === null || _f === void 0 ? void 0 : _f.pdbx_description) !== null && _g !== void 0 ? _g : (_l = (_k = (_j = (_h = instance.polymer_entity) === null || _h === void 0 ? void 0 : _h.rcsb_polymer_entity) === null || _j === void 0 ? void 0 : _j.rcsb_polymer_name_combined) === null || _k === void 0 ? void 0 : _k.names) === null || _l === void 0 ? void 0 : _l.join(", "))) !== null && _m !== void 0 ? _m : "NA",
|
|
66
66
|
taxNames: Array.from(taxIds),
|
|
67
67
|
experimentalMethod: (_q = (_p = (_o = instance.polymer_entity) === null || _o === void 0 ? void 0 : _o.entry) === null || _p === void 0 ? void 0 : _p.rcsb_entry_info.experimental_method) !== null && _q !== void 0 ? _q : "NA",
|
|
68
68
|
resolution: (_u = (_t = (_s = (_r = instance.polymer_entity) === null || _r === void 0 ? void 0 : _r.entry) === null || _s === void 0 ? void 0 : _s.rcsb_entry_info.resolution_combined) === null || _t === void 0 ? void 0 : _t[0]) !== null && _u !== void 0 ? _u : undefined,
|
|
@@ -56,7 +56,7 @@ class PolymerEntityInstancesCollector {
|
|
|
56
56
|
asymId: o.asym_id,
|
|
57
57
|
authId: o.auth_asym_id,
|
|
58
58
|
authResId: o.auth_to_entity_poly_seq_mapping,
|
|
59
|
-
name: (_o = ((
|
|
59
|
+
name: (_o = ((_h = (_g = (_f = instance === null || instance === void 0 ? void 0 : instance.polymer_entity) === null || _f === void 0 ? void 0 : _f.rcsb_polymer_entity) === null || _g === void 0 ? void 0 : _g.pdbx_description) !== null && _h !== void 0 ? _h : (_m = (_l = (_k = (_j = instance.polymer_entity) === null || _j === void 0 ? void 0 : _j.rcsb_polymer_entity) === null || _k === void 0 ? void 0 : _k.rcsb_polymer_name_combined) === null || _l === void 0 ? void 0 : _l.names) === null || _m === void 0 ? void 0 : _m.join(", "))) !== null && _o !== void 0 ? _o : "NA",
|
|
60
60
|
taxNames: Array.from(taxIds),
|
|
61
61
|
experimentalMethod: (_p = p.rcsb_entry_info.experimental_method) !== null && _p !== void 0 ? _p : "NA",
|
|
62
62
|
resolution: (_t = (_s = (_r = (_q = instance.polymer_entity) === null || _q === void 0 ? void 0 : _q.entry) === null || _r === void 0 ? void 0 : _r.rcsb_entry_info.resolution_combined) === null || _s === void 0 ? void 0 : _s[0]) !== null && _t !== void 0 ? _t : undefined,
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@rcsb/rcsb-saguaro-app",
|
|
3
|
-
"version": "6.4.
|
|
3
|
+
"version": "6.4.2",
|
|
4
4
|
"description": "RCSB 1D Saguaro Web App",
|
|
5
5
|
"main": "build/app.js",
|
|
6
6
|
"files": [
|
|
@@ -27,7 +27,7 @@
|
|
|
27
27
|
"buildDoc": "typedoc --excludeExternals --externalPattern \"**/node_modules/**\" --plugin typedoc-plugin-missing-exports --plugin typedoc-theme-hierarchy --theme hierarchy --entryPointStrategy expand ./src && sed -i '' '/---/d' docs/index.html",
|
|
28
28
|
"cpExamples": "ncp examples docs/examples",
|
|
29
29
|
"buildAllDoc": "npm run buildDoc && npm run cpExamples",
|
|
30
|
-
"publishApp": "npm publish
|
|
30
|
+
"publishApp": "npm publish",
|
|
31
31
|
"test": "echo \"Error: no test specified\" && exit 1"
|
|
32
32
|
},
|
|
33
33
|
"repository": {
|
|
@@ -89,7 +89,7 @@
|
|
|
89
89
|
"worker-loader": "^3.0.8"
|
|
90
90
|
},
|
|
91
91
|
"dependencies": {
|
|
92
|
-
"@rcsb/rcsb-api-tools": "^5.1.
|
|
92
|
+
"@rcsb/rcsb-api-tools": "^5.1.1",
|
|
93
93
|
"@rcsb/rcsb-charts": "^0.2.27",
|
|
94
94
|
"@rcsb/rcsb-saguaro": "^3.1.7",
|
|
95
95
|
"@rcsb/rcsb-search-tools": "^0.0.15",
|