@rcsb/rcsb-saguaro-app 6.3.2-dev-js-seqcoord.13 → 6.3.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (523) hide show
  1. package/build/app.js +1 -1
  2. package/build/constants.js +1 -1
  3. package/build/plot.js +1 -1
  4. package/build/worker.js +1 -1
  5. package/lib/ExternalResources/NcbiData/NcbiGenomeSequenceData.js +0 -1
  6. package/lib/ExternalResources/NcbiData/NcbiSummary.js +0 -1
  7. package/lib/RcsbAnnotationConfig/AnnotationConfigInterface.js +0 -1
  8. package/lib/RcsbAnnotationConfig/RcsbAnnotationConfig.d.ts +2 -2
  9. package/lib/RcsbAnnotationConfig/RcsbAnnotationConfig.js +0 -1
  10. package/lib/RcsbAnnotationConfig/RcsbAnnotationConstants.js +0 -1
  11. package/lib/RcsbAnnotationConfig/RcsbDistributionConfig.js +0 -1
  12. package/lib/RcsbChartWeb/AbsractChartComponent.js +0 -1
  13. package/lib/RcsbChartWeb/BarChartComponent.js +0 -1
  14. package/lib/RcsbChartWeb/HistogramChartComponent.js +0 -1
  15. package/lib/RcsbCollectTools/AlignmentCollector/AlignmentCollector.d.ts +4 -4
  16. package/lib/RcsbCollectTools/AlignmentCollector/AlignmentCollector.js +8 -9
  17. package/lib/RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface.d.ts +4 -4
  18. package/lib/RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface.js +0 -1
  19. package/lib/RcsbCollectTools/AnnotationCollector/AnnotationCollector.d.ts +4 -4
  20. package/lib/RcsbCollectTools/AnnotationCollector/AnnotationCollector.js +9 -17
  21. package/lib/RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface.d.ts +10 -11
  22. package/lib/RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface.js +0 -1
  23. package/lib/RcsbCollectTools/DataCollectors/AssemblyInterfacesCollector.js +0 -1
  24. package/lib/RcsbCollectTools/DataCollectors/DataCollectorInterface.js +0 -1
  25. package/lib/RcsbCollectTools/DataCollectors/EntryAssembliesCollector.js +0 -1
  26. package/lib/RcsbCollectTools/DataCollectors/GroupMemberCollector.js +0 -1
  27. package/lib/RcsbCollectTools/DataCollectors/GroupPropertyCollector.js +0 -1
  28. package/lib/RcsbCollectTools/DataCollectors/InterfaceInstanceCollector.js +0 -1
  29. package/lib/RcsbCollectTools/DataCollectors/MultipleEntityInstancesCollector.js +0 -1
  30. package/lib/RcsbCollectTools/DataCollectors/MultipleEntryPropertyCollector.js +0 -1
  31. package/lib/RcsbCollectTools/DataCollectors/MultipleInstanceSequencesCollector.js +0 -1
  32. package/lib/RcsbCollectTools/DataCollectors/MultiplePolymerEntityCollector.js +0 -1
  33. package/lib/RcsbCollectTools/DataCollectors/PolymerEntityChromosomeCollector.js +1 -2
  34. package/lib/RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector.js +0 -1
  35. package/lib/RcsbCollectTools/FeatureTools/ExternalTrackBuilderInterface.d.ts +7 -7
  36. package/lib/RcsbCollectTools/FeatureTools/ExternalTrackBuilderInterface.js +0 -1
  37. package/lib/RcsbCollectTools/FeatureTools/FeatureTools.js +0 -1
  38. package/lib/RcsbExport/FeatureType.d.ts +4 -4
  39. package/lib/RcsbExport/FeatureType.js +2 -3
  40. package/lib/RcsbExport/RcsbFvUI.js +0 -1
  41. package/lib/RcsbFvExamples/ChromosomeFv.js +0 -1
  42. package/lib/RcsbFvExamples/EntitySummaryFv.js +0 -1
  43. package/lib/RcsbFvExamples/ExternalDataProvider.js +4 -5
  44. package/lib/RcsbFvExamples/GroupHistogram.js +0 -1
  45. package/lib/RcsbFvExamples/InstanceFv.js +0 -1
  46. package/lib/RcsbFvExamples/InstanceSequenceFv.js +2 -3
  47. package/lib/RcsbFvExamples/ResidueDistribution.js +0 -1
  48. package/lib/RcsbFvExamples/SequenceIdentityGroupAlignmentFv.js +2 -3
  49. package/lib/RcsbFvExamples/SequenceIdentityGroupFv.js +0 -1
  50. package/lib/RcsbFvExamples/SingleEntitySummaryFv.js +0 -1
  51. package/lib/RcsbFvExamples/TestCollectors.js +0 -1
  52. package/lib/RcsbFvExamples/UniprotAlignmentFv.js +0 -1
  53. package/lib/RcsbFvExamples/UniprotEntityInstanceFv.js +0 -1
  54. package/lib/RcsbFvExamples/UniprotFv.js +0 -1
  55. package/lib/RcsbFvExamples/UniprotGroupFv.js +5 -7
  56. package/lib/RcsbFvExamples/utils/events.js +0 -1
  57. package/lib/RcsbFvUI/AbstractMenuItemComponent.js +0 -1
  58. package/lib/RcsbFvUI/Components/FilterItemComponent.js +0 -1
  59. package/lib/RcsbFvUI/Components/ItemComponent.js +0 -1
  60. package/lib/RcsbFvUI/Components/PaginationItemComponent.d.ts +1 -1
  61. package/lib/RcsbFvUI/Components/PaginationItemComponent.js +1 -2
  62. package/lib/RcsbFvUI/GroupPfvUI.js +0 -1
  63. package/lib/RcsbFvUI/Helper/ActionMethods.js +0 -1
  64. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvAssemblyBuilder.js +0 -1
  65. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvChromosomeBuilder.js +0 -1
  66. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvContextManager.js +0 -1
  67. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvCoreBuilder.js +0 -1
  68. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvDataProviderBuilder.js +0 -1
  69. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.js +5 -6
  70. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvGroupAlignmentBuilder.js +4 -5
  71. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvGroupBuilder.js +0 -1
  72. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvInstanceBuilder.js +0 -1
  73. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvPairwiseAligmentBuilder.js +0 -1
  74. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvProteinSequenceBuilder.js +4 -5
  75. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvUniprotBuilder.js +0 -1
  76. package/lib/RcsbFvWeb/RcsbFvBuilder.js +0 -1
  77. package/lib/RcsbFvWeb/RcsbFvComponents/ComponentsManager.js +0 -1
  78. package/lib/RcsbFvWeb/RcsbFvComponents/LoaderSpinner.js +0 -1
  79. package/lib/RcsbFvWeb/RcsbFvComponents/MountableComponent.js +0 -1
  80. package/lib/RcsbFvWeb/RcsbFvComponents/RcsbTabs.js +0 -1
  81. package/lib/RcsbFvWeb/RcsbFvComponents/SelectButton.js +0 -1
  82. package/lib/RcsbFvWeb/RcsbFvComponents/SelectButtonManager.js +0 -1
  83. package/lib/RcsbFvWeb/RcsbFvComponents/SelectButtonTitle.js +0 -1
  84. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AlignmentBlockFactory.d.ts +6 -6
  85. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AlignmentBlockFactory.js +2 -3
  86. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AnnotationsBlockFactory.d.ts +4 -4
  87. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AnnotationsBlockFactory.js +0 -1
  88. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockFactoryInterface.js +0 -1
  89. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationBlockManager.d.ts +3 -3
  90. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationBlockManager.js +0 -1
  91. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationTrackManager.d.ts +2 -2
  92. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationTrackManager.js +2 -3
  93. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/BlockManagerInterface.js +0 -1
  94. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/TrackManagerInterface.d.ts +3 -3
  95. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/TrackManagerInterface.js +0 -1
  96. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/RcsbFvTrackDataAnnotationInterface.js +0 -1
  97. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/AlignmentTrackFactory.d.ts +5 -5
  98. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/AlignmentTrackFactory.js +0 -1
  99. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/AnnotationsTrackFactory.js +0 -1
  100. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.d.ts +3 -3
  101. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/Helper/TrackUtils.js +0 -1
  102. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.d.ts +4 -4
  103. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.js +0 -1
  104. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainAlignmentTrackFactory.d.ts +5 -5
  105. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainAlignmentTrackFactory.js +0 -1
  106. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainObservedAlignmentTrackFactory.d.ts +4 -4
  107. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PlainObservedAlignmentTrackFactory.js +0 -1
  108. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PositionalScoreAlignmentTrackFactory.d.ts +4 -4
  109. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/PositionalScoreAlignmentTrackFactory.js +2 -3
  110. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory.js +0 -1
  111. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryInterface.js +0 -1
  112. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.d.ts +5 -5
  113. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AlignmentTrackTitleFactory.js +0 -1
  114. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/AnnotationsTrackTitleFactory.js +0 -1
  115. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ExperimentalAlignmentTrackTitleFactory.d.ts +5 -5
  116. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ExperimentalAlignmentTrackTitleFactory.js +0 -1
  117. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/InstanceSequenceTrackTitleFactory.js +0 -1
  118. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ModelAlignmentTrackTitleFactory.d.ts +5 -5
  119. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/ModelAlignmentTrackTitleFactory.js +0 -1
  120. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryImpl/SequenceTrackTitleFactory.js +0 -1
  121. package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackTitleFactoryInterface.js +0 -1
  122. package/lib/RcsbFvWeb/RcsbFvGroup/GroupPfvTabs.js +11 -12
  123. package/lib/RcsbFvWeb/RcsbFvGroup/GroupTabs/GroupPfvApp.js +23 -30
  124. package/lib/RcsbFvWeb/RcsbFvGroup/RcsbFvGroupTabsBuilder.js +0 -1
  125. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvAbstractModule.d.ts +6 -6
  126. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvAbstractModule.js +0 -1
  127. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvChromosome.js +8 -9
  128. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvDataProvider.js +0 -1
  129. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvEntity.js +3 -4
  130. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAlignment.js +28 -35
  131. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAnnotation.js +5 -7
  132. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvInstance.js +2 -3
  133. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvInterface.d.ts +3 -3
  134. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvInterface.js +11 -14
  135. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvModuleInterface.d.ts +9 -10
  136. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvModuleInterface.js +0 -1
  137. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvPairwiseAlignment.js +1 -2
  138. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvProteinSequence.js +2 -5
  139. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprot.js +6 -7
  140. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotAlignment.js +6 -7
  141. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotEntity.js +4 -5
  142. package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvUniprotInstance.js +4 -5
  143. package/lib/RcsbFvWeb/RcsbFvTooltip/RcsbFvTooltip.js +1 -2
  144. package/lib/RcsbFvWeb/RcsbFvWorkers/RcsbFvAlignmentCollectorQueue.d.ts +2 -2
  145. package/lib/RcsbFvWeb/RcsbFvWorkers/RcsbFvAlignmentCollectorQueue.js +0 -1
  146. package/lib/RcsbFvWeb/RcsbFvWorkers/RcsbFvAlignmentCollectorWorker.worker.js +0 -1
  147. package/lib/RcsbGraphQL/RcsbClient.d.ts +5 -7
  148. package/lib/RcsbGraphQL/RcsbClient.js +1 -8
  149. package/lib/RcsbGraphQL/RcsbCoreQueryInterface.js +0 -1
  150. package/lib/RcsbGraphQL/RcsbQueryAlignment.d.ts +7 -7
  151. package/lib/RcsbGraphQL/RcsbQueryAlignment.js +2 -3
  152. package/lib/RcsbGraphQL/RcsbQueryAnnotations.d.ts +5 -10
  153. package/lib/RcsbGraphQL/RcsbQueryAnnotations.js +7 -20
  154. package/lib/RcsbGraphQL/RcsbQueryAssemblyInterfaces.js +0 -1
  155. package/lib/RcsbGraphQL/RcsbQueryEntryInstances.js +0 -1
  156. package/lib/RcsbGraphQL/RcsbQueryGroup.js +0 -1
  157. package/lib/RcsbGraphQL/RcsbQueryInterfaceInstances.js +0 -1
  158. package/lib/RcsbGraphQL/RcsbQueryMultipleEntityInstances.js +0 -1
  159. package/lib/RcsbGraphQL/RcsbQueryMultipleEntriesProperties.js +0 -1
  160. package/lib/RcsbGraphQL/RcsbQueryMultipleInstanceSequences.js +0 -1
  161. package/lib/RcsbGroupWeb/RcsbGroupBuilder.js +0 -1
  162. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartAdditionalProperties.js +0 -1
  163. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartEvents.js +0 -1
  164. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartLayout.js +0 -1
  165. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/GroupChartTools.js +0 -1
  166. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/RcsbGroupChartComponent.js +0 -1
  167. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupChart/RcsbStatsChartComponent.js +0 -1
  168. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupContent/RcsbGroupContentComponent.js +0 -1
  169. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupDisplay.js +0 -1
  170. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/Components/Slider.js +0 -1
  171. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMemberItem.js +0 -1
  172. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/GroupMembersGrid.js +0 -1
  173. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/RcsbGroupMembersComponent.js +0 -1
  174. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupSeacrhQuery/RcsbGroupSeacrhQueryComponent.js +0 -1
  175. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbGroupSeacrhQuery/SearchQueryContextManager.js +0 -1
  176. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/RcsbResidueChartComponent.js +0 -1
  177. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartFactories/DistributionChartFactoryImpl/DistributionChartFactory.js +0 -1
  178. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartFactories/ResidueDistributionFactoryImpl/MultipleTrackDistributionFactory.js +0 -1
  179. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartFactories/ResidueDistributionFactoryImpl/NumericalTrackDistributionFactory.js +0 -1
  180. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartFactories/ResidueDistributionFactoryImpl/TrackDistributionFactory.js +0 -1
  181. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartFactories/ResidueDistributionFactoryInterface.js +0 -1
  182. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartFactories/TrackBlockFactoryImpl/TrackBlockFactory.js +0 -1
  183. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartTools/Helper.js +0 -1
  184. package/lib/RcsbGroupWeb/RcsbGroupView/RcsbResidueChart/ResidueChartTools/ResidueChartTools.js +2 -3
  185. package/lib/RcsbQueries/Borrego/.graphqlconfig +15 -0
  186. package/lib/RcsbQueries/Borrego/QueryAlignments.graphql +3 -3
  187. package/lib/RcsbQueries/Borrego/QueryAnnotations.graphql +1 -7
  188. package/lib/RcsbQueries/Borrego/QueryGroupAlignments.graphql +29 -24
  189. package/lib/RcsbQueries/Borrego/QueryGroupAlignmentsNoLogo.graphql +28 -22
  190. package/lib/RcsbQueries/Borrego/QueryGroupAnnotations.graphql +2 -6
  191. package/lib/RcsbQueries/Borrego/schema.graphql +163 -376
  192. package/lib/RcsbQueries/QueryCheck.js +0 -1
  193. package/lib/RcsbRequest/RcsbRequestClient.js +0 -1
  194. package/lib/RcsbRequest/RcsbRequestContextManager.d.ts +1 -1
  195. package/lib/RcsbRequest/RcsbRequestContextManager.js +0 -1
  196. package/lib/RcsbRequest/RcsbRequestTools.js +12 -15
  197. package/lib/RcsbSeacrh/FacetStore/DepositionGroupFacetStore.js +0 -1
  198. package/lib/RcsbSeacrh/FacetStore/EntityGranularitySearchFacetStore.js +0 -1
  199. package/lib/RcsbSeacrh/FacetStore/FacetMemberInterface.js +0 -1
  200. package/lib/RcsbSeacrh/FacetStore/FacetStoreInterface.js +0 -1
  201. package/lib/RcsbSeacrh/FacetStore/SequenceGroupFacetStore.js +0 -1
  202. package/lib/RcsbSeacrh/FacetStore/SingleFacets.js +0 -1
  203. package/lib/RcsbSeacrh/FacetStore/UniprotGroupFacetStore.js +0 -1
  204. package/lib/RcsbSeacrh/FacetTools.js +0 -1
  205. package/lib/RcsbSeacrh/SearchQueryTools.js +0 -1
  206. package/lib/RcsbSeacrh/SearchRequestProperty.js +0 -1
  207. package/lib/RcsbServerConfig/ServerConfig.js +0 -1
  208. package/lib/RcsbServerConfig/codegen.borrego.json +1 -1
  209. package/lib/RcsbUtils/Groups/GroupGapLessTransformer.d.ts +3 -3
  210. package/lib/RcsbUtils/Groups/GroupGapLessTransformer.js +21 -11
  211. package/lib/RcsbUtils/Groups/GroupPropertiesProvider.js +0 -1
  212. package/lib/RcsbUtils/Groups/GroupProvenanceToAggregationType.js +0 -1
  213. package/lib/RcsbUtils/Helpers/Assertions.js +0 -1
  214. package/lib/RcsbUtils/Helpers/DataContainer.js +0 -1
  215. package/lib/RcsbUtils/Helpers/ObservableHelper.js +0 -1
  216. package/lib/RcsbUtils/Helpers/Operator.js +0 -1
  217. package/lib/RcsbUtils/Helpers/SingletonMap.js +0 -1
  218. package/lib/RcsbUtils/Helpers/UrlTools.js +0 -1
  219. package/lib/RcsbUtils/PairwiseAlignmentTools/AlignmentReference.d.ts +2 -2
  220. package/lib/RcsbUtils/PairwiseAlignmentTools/AlignmentReference.js +3 -4
  221. package/lib/RcsbUtils/PairwiseAlignmentTools/PairwiseAlignmentBuilder.js +0 -1
  222. package/lib/RcsbUtils/TrackGenerators/AlignmentGlobalBindingSite.js +28 -27
  223. package/lib/RcsbUtils/TrackGenerators/BurialFraction.d.ts +3 -3
  224. package/lib/RcsbUtils/TrackGenerators/BurialFraction.js +4 -5
  225. package/lib/RcsbUtils/TrackGenerators/BuriedResidues.d.ts +3 -3
  226. package/lib/RcsbUtils/TrackGenerators/BuriedResidues.js +5 -6
  227. package/lib/RcsbUtils/TrackGenerators/GroupExternalTrackBuilder.js +0 -1
  228. package/lib/RcsbUtils/TrackGenerators/Logo.js +0 -1
  229. package/lib/RcsbUtils/TrackGenerators/UnmodeledTrackBuilder.d.ts +3 -3
  230. package/lib/RcsbUtils/TrackGenerators/UnmodeledTrackBuilder.js +5 -6
  231. package/lib/RcsbUtils/Translators/AssemblyInterfacesTranslate.js +0 -1
  232. package/lib/RcsbUtils/Translators/EntryAssemblyTranslate.js +0 -1
  233. package/lib/RcsbUtils/Translators/InterfaceInstanceTranslate.js +0 -1
  234. package/lib/RcsbUtils/Translators/MultipleEntityInstanceTranslate.js +0 -1
  235. package/lib/RcsbUtils/Translators/PolymerEntityChromosomeTranslate.js +0 -1
  236. package/lib/RcsbUtils/Translators/PolymerEntityInstanceTranslate.d.ts +2 -2
  237. package/lib/RcsbUtils/Translators/PolymerEntityInstanceTranslate.js +3 -4
  238. package/lib/app.js +0 -1
  239. package/lib/commonjs/RcsbAnnotationConfig/RcsbAnnotationConfig.d.ts +2 -2
  240. package/lib/commonjs/RcsbCollectTools/AlignmentCollector/AlignmentCollector.d.ts +4 -4
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