@rcsb/rcsb-saguaro-app 6.2.6 → 6.3.0

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Files changed (12) hide show
  1. package/build/app.js +1 -1
  2. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvContextManager.js +1 -1
  3. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.d.ts +1 -1
  4. package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.js +5 -5
  5. package/lib/RcsbFvWeb/RcsbFvBuilder.d.ts +1 -1
  6. package/lib/RcsbFvWeb/RcsbFvBuilder.js +1 -1
  7. package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvContextManager.js +1 -1
  8. package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.d.ts +1 -1
  9. package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.js +5 -5
  10. package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder.d.ts +1 -1
  11. package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder.js +1 -1
  12. package/package.json +2 -2
package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvContextManager.js CHANGED
@@ -38,7 +38,7 @@ class RcsbFvContextManager {
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  }
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  }
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  function buildRcsbFvSingleViewer(elementId, boardConfig) {
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- const config = Object.assign({ rowTitleWidth: 190, trackWidth: 900, tooltipGenerator: new RcsbFvTooltip() }, boardConfig);
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+ const config = Object.assign({ rowTitleWidth: 190, tooltipGenerator: new RcsbFvTooltip() }, boardConfig);
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  return new RcsbFv({
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  rowConfigData: [],
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  boardConfigData: config,
package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.d.ts CHANGED
@@ -1,7 +1,7 @@
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  import { RcsbFvAdditionalConfig } from "../RcsbFvModule/RcsbFvModuleInterface";
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  import { RcsbFvModulePublicInterface } from "../RcsbFvModule/RcsbFvModuleInterface";
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  export declare class RcsbFvEntityBuilder {
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- static buildEntitySummaryFv(elementFvId: string, elementSelectId: string, entityId: string): Promise<RcsbFvModulePublicInterface>;
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+ static buildEntitySummaryFv(elementFvId: string, elementSelectId: string, entityId: string, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
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  static buildSingleEntitySummaryFv(elementId: string, entityId: string): Promise<RcsbFvModulePublicInterface>;
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  static buildEntityFv(elementId: string, entityId: string, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
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  }
package/lib/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.js CHANGED
@@ -5,7 +5,7 @@ import { RcsbFvCoreBuilder } from "./RcsbFvCoreBuilder";
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  import { RcsbFvUniprotBuilder } from "./RcsbFvUniprotBuilder";
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  import { TagDelimiter } from "@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter";
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  export class RcsbFvEntityBuilder {
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- static buildEntitySummaryFv(elementFvId, elementSelectId, entityId) {
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+ static buildEntitySummaryFv(elementFvId, elementSelectId, entityId, additionalConfig) {
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  return __awaiter(this, void 0, void 0, function* () {
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  return new Promise((resolve, reject) => {
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  const pdbId = TagDelimiter.parseEntity(entityId).entryId;
@@ -17,7 +17,7 @@ export class RcsbFvEntityBuilder {
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  config: {
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  entityId: entityId,
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  elementSelectId: elementSelectId,
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- additionalConfig: Object.assign({ rcsbContext: TagDelimiter.parseEntity(entityId) }, additionalConfig()),
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+ additionalConfig: Object.assign(Object.assign({ rcsbContext: TagDelimiter.parseEntity(entityId) }, customAdditionalConfig()), additionalConfig),
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  resolve: resolve
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  }
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  });
@@ -30,7 +30,7 @@ export class RcsbFvEntityBuilder {
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  yield RcsbFvEntityBuilder.buildSingleEntitySummaryFv(elementFvId, entityId);
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  }
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  else {
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- yield RcsbFvUniprotBuilder.buildUniprotEntityFv(elementFvId, t, entityId, Object.assign({ alignmentFilter: [entityId] }, additionalConfig({
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+ yield RcsbFvUniprotBuilder.buildUniprotEntityFv(elementFvId, t, entityId, Object.assign({ alignmentFilter: [entityId] }, customAdditionalConfig({
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  field: FieldName.TargetId,
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  operation: OperationType.Contains,
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  source: Source.PdbInstance,
@@ -53,7 +53,7 @@ export class RcsbFvEntityBuilder {
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  const entryId = TagDelimiter.parseEntity(entityId).entryId;
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  RcsbFvCoreBuilder.getPolymerEntityInstanceMapAndBuildFv(elementId, entryId, RcsbFvEntity, {
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  entityId: entityId,
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- additionalConfig: Object.assign({ rcsbContext: TagDelimiter.parseEntity(entityId) }, additionalConfig()),
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+ additionalConfig: Object.assign({ rcsbContext: TagDelimiter.parseEntity(entityId) }, customAdditionalConfig()),
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  resolve: resolve
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  });
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  });
@@ -72,7 +72,7 @@ export class RcsbFvEntityBuilder {
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  });
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  }
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  }
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- function additionalConfig(f) {
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+ function customAdditionalConfig(f) {
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  const filters = [{
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  field: FieldName.Type,
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  operation: OperationType.Equals,
package/lib/RcsbFvWeb/RcsbFvBuilder.d.ts CHANGED
@@ -8,7 +8,7 @@ import { PairwiseAlignmentInterface } from "../RcsbUtils/PairwiseAlignmentTools/
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  import { ActionMethods } from "../RcsbFvUI/Helper/ActionMethods";
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  export declare function unmount(elementId: string): void;
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  export declare function buildMultipleAlignmentSequenceFv(elementFvId: string, elementSelectId: string, upAcc: string, config?: UniprotSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
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- export declare function buildEntitySummaryFv(elementFvId: string, elementSelectId: string, entityId: string): Promise<RcsbFvModulePublicInterface>;
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+ export declare function buildEntitySummaryFv(elementFvId: string, elementSelectId: string, entityId: string, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
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  export declare function buildSingleEntitySummaryFv(elementId: string, entityId: string): Promise<RcsbFvModulePublicInterface>;
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  export declare function buildInstanceSequenceFv(elementFvId: string, elementSelectId: string, entryId: string, config?: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
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  export declare function buildMultipleInstanceSequenceFv(elementFvId: string, elementEntrySelectId: string, elementInstanceSelectId: string, entryIdList: Array<string>, config?: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
package/lib/RcsbFvWeb/RcsbFvBuilder.js CHANGED
@@ -16,7 +16,7 @@ export function unmount(elementId) {
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  export function buildMultipleAlignmentSequenceFv(elementFvId, elementSelectId, upAcc, config = {}, additionalConfig) {
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  return RcsbFvUniprotBuilder.buildUniprotMultipleEntitySequenceFv(elementFvId, elementSelectId, upAcc, config, additionalConfig);
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  }
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- export function buildEntitySummaryFv(elementFvId, elementSelectId, entityId) {
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+ export function buildEntitySummaryFv(elementFvId, elementSelectId, entityId, additionalConfig) {
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  return RcsbFvEntityBuilder.buildEntitySummaryFv(elementFvId, elementSelectId, entityId);
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  }
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  export function buildSingleEntitySummaryFv(elementId, entityId) {
package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvContextManager.js CHANGED
@@ -41,7 +41,7 @@ class RcsbFvContextManager {
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  }
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  }
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  function buildRcsbFvSingleViewer(elementId, boardConfig) {
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- const config = Object.assign({ rowTitleWidth: 190, trackWidth: 900, tooltipGenerator: new RcsbFvTooltip_1.RcsbFvTooltip() }, boardConfig);
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+ const config = Object.assign({ rowTitleWidth: 190, tooltipGenerator: new RcsbFvTooltip_1.RcsbFvTooltip() }, boardConfig);
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  return new RcsbFv_1.RcsbFv({
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  rowConfigData: [],
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  boardConfigData: config,
package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.d.ts CHANGED
@@ -1,7 +1,7 @@
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  import { RcsbFvAdditionalConfig } from "../RcsbFvModule/RcsbFvModuleInterface";
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  import { RcsbFvModulePublicInterface } from "../RcsbFvModule/RcsbFvModuleInterface";
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  export declare class RcsbFvEntityBuilder {
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- static buildEntitySummaryFv(elementFvId: string, elementSelectId: string, entityId: string): Promise<RcsbFvModulePublicInterface>;
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+ static buildEntitySummaryFv(elementFvId: string, elementSelectId: string, entityId: string, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
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  static buildSingleEntitySummaryFv(elementId: string, entityId: string): Promise<RcsbFvModulePublicInterface>;
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  static buildEntityFv(elementId: string, entityId: string, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
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  }
package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder/RcsbFvEntityBuilder.js CHANGED
@@ -8,7 +8,7 @@ const RcsbFvCoreBuilder_1 = require("./RcsbFvCoreBuilder");
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  const RcsbFvUniprotBuilder_1 = require("./RcsbFvUniprotBuilder");
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  const TagDelimiter_1 = require("@rcsb/rcsb-api-tools/build/RcsbUtils/TagDelimiter");
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  class RcsbFvEntityBuilder {
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- static buildEntitySummaryFv(elementFvId, elementSelectId, entityId) {
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+ static buildEntitySummaryFv(elementFvId, elementSelectId, entityId, additionalConfig) {
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  return tslib_1.__awaiter(this, void 0, void 0, function* () {
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  return new Promise((resolve, reject) => {
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  const pdbId = TagDelimiter_1.TagDelimiter.parseEntity(entityId).entryId;
@@ -20,7 +20,7 @@ class RcsbFvEntityBuilder {
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  config: {
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  entityId: entityId,
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  elementSelectId: elementSelectId,
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- additionalConfig: Object.assign({ rcsbContext: TagDelimiter_1.TagDelimiter.parseEntity(entityId) }, additionalConfig()),
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+ additionalConfig: Object.assign(Object.assign({ rcsbContext: TagDelimiter_1.TagDelimiter.parseEntity(entityId) }, customAdditionalConfig()), additionalConfig),
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  resolve: resolve
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  }
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  });
@@ -33,7 +33,7 @@ class RcsbFvEntityBuilder {
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  yield RcsbFvEntityBuilder.buildSingleEntitySummaryFv(elementFvId, entityId);
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  }
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  else {
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- yield RcsbFvUniprotBuilder_1.RcsbFvUniprotBuilder.buildUniprotEntityFv(elementFvId, t, entityId, Object.assign({ alignmentFilter: [entityId] }, additionalConfig({
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+ yield RcsbFvUniprotBuilder_1.RcsbFvUniprotBuilder.buildUniprotEntityFv(elementFvId, t, entityId, Object.assign({ alignmentFilter: [entityId] }, customAdditionalConfig({
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  field: GqlTypes_1.FieldName.TargetId,
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  operation: GqlTypes_1.OperationType.Contains,
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  source: GqlTypes_1.Source.PdbInstance,
@@ -56,7 +56,7 @@ class RcsbFvEntityBuilder {
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  const entryId = TagDelimiter_1.TagDelimiter.parseEntity(entityId).entryId;
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  RcsbFvCoreBuilder_1.RcsbFvCoreBuilder.getPolymerEntityInstanceMapAndBuildFv(elementId, entryId, RcsbFvEntity_1.RcsbFvEntity, {
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  entityId: entityId,
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- additionalConfig: Object.assign({ rcsbContext: TagDelimiter_1.TagDelimiter.parseEntity(entityId) }, additionalConfig()),
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+ additionalConfig: Object.assign({ rcsbContext: TagDelimiter_1.TagDelimiter.parseEntity(entityId) }, customAdditionalConfig()),
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  resolve: resolve
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  });
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  });
@@ -76,7 +76,7 @@ class RcsbFvEntityBuilder {
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  }
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  }
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  exports.RcsbFvEntityBuilder = RcsbFvEntityBuilder;
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- function additionalConfig(f) {
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+ function customAdditionalConfig(f) {
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  const filters = [{
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  field: GqlTypes_1.FieldName.Type,
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  operation: GqlTypes_1.OperationType.Equals,
package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder.d.ts CHANGED
@@ -8,7 +8,7 @@ import { PairwiseAlignmentInterface } from "../RcsbUtils/PairwiseAlignmentTools/
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  import { ActionMethods } from "../RcsbFvUI/Helper/ActionMethods";
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  export declare function unmount(elementId: string): void;
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  export declare function buildMultipleAlignmentSequenceFv(elementFvId: string, elementSelectId: string, upAcc: string, config?: UniprotSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
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- export declare function buildEntitySummaryFv(elementFvId: string, elementSelectId: string, entityId: string): Promise<RcsbFvModulePublicInterface>;
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+ export declare function buildEntitySummaryFv(elementFvId: string, elementSelectId: string, entityId: string, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
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  export declare function buildSingleEntitySummaryFv(elementId: string, entityId: string): Promise<RcsbFvModulePublicInterface>;
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  export declare function buildInstanceSequenceFv(elementFvId: string, elementSelectId: string, entryId: string, config?: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
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  export declare function buildMultipleInstanceSequenceFv(elementFvId: string, elementEntrySelectId: string, elementInstanceSelectId: string, entryIdList: Array<string>, config?: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
package/lib/commonjs/RcsbFvWeb/RcsbFvBuilder.js CHANGED
@@ -40,7 +40,7 @@ function unmount(elementId) {
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  function buildMultipleAlignmentSequenceFv(elementFvId, elementSelectId, upAcc, config = {}, additionalConfig) {
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  return RcsbFvUniprotBuilder_1.RcsbFvUniprotBuilder.buildUniprotMultipleEntitySequenceFv(elementFvId, elementSelectId, upAcc, config, additionalConfig);
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  }
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- function buildEntitySummaryFv(elementFvId, elementSelectId, entityId) {
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+ function buildEntitySummaryFv(elementFvId, elementSelectId, entityId, additionalConfig) {
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  return RcsbFvEntityBuilder_1.RcsbFvEntityBuilder.buildEntitySummaryFv(elementFvId, elementSelectId, entityId);
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  }
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  function buildSingleEntitySummaryFv(elementId, entityId) {
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@rcsb/rcsb-saguaro-app",
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- "version": "6.2.6",
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+ "version": "6.3.0",
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  "description": "RCSB 1D Saguaro Web App",
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  "main": "build/app.js",
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  "files": [
@@ -92,7 +92,7 @@
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  },
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  "dependencies": {
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  "@rcsb/rcsb-charts": "^0.2.24",
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- "@rcsb/rcsb-saguaro": "^3.0.9",
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+ "@rcsb/rcsb-saguaro": "^3.1.0",
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  "@rcsb/rcsb-search-tools": "^0.0.14",
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  "ideogram": "^1.47.0",
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  "react-bootstrap": "^2.10.4",