@rcsb/rcsb-saguaro-app 6.2.5-dev-js-seqcoord.4 → 6.2.5-dev-js-seqcoord.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/build/app.js +1 -1
- package/lib/RcsbFvExamples/SequenceIdentityGroupAlignmentFv.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAlignment.js +1 -1
- package/lib/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAlignment.js.map +1 -1
- package/lib/commonjs/RcsbFvExamples/SequenceIdentityGroupAlignmentFv.js +1 -1
- package/lib/commonjs/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAlignment.js +1 -1
- package/package.json +1 -1
|
@@ -11,7 +11,7 @@ class UiComponent extends React.Component {
|
|
|
11
11
|
}, children: this.props.text }));
|
|
12
12
|
}
|
|
13
13
|
}
|
|
14
|
-
buildSequenceIdentityAlignmentFv("pfv", "
|
|
14
|
+
buildSequenceIdentityAlignmentFv("pfv", "1_30", undefined, {
|
|
15
15
|
boardConfig: {
|
|
16
16
|
selectionChangeCallback: (selection) => {
|
|
17
17
|
console.log(selection);
|
|
@@ -27,7 +27,6 @@ export class RcsbFvGroupAlignment extends RcsbFvAbstractModule {
|
|
|
27
27
|
sequencePrefix: (_f = (_e = buildConfig.additionalConfig) === null || _e === void 0 ? void 0 : _e.sequencePrefix) !== null && _f !== void 0 ? _f : "",
|
|
28
28
|
externalTrackBuilder: (_g = buildConfig.additionalConfig) === null || _g === void 0 ? void 0 : _g.externalTrackBuilder
|
|
29
29
|
};
|
|
30
|
-
collectNextPage(alignmentRequestContext, this.alignmentCollector, this.annotationCollector).then(() => console.log("Next page ready"));
|
|
31
30
|
const alignmentResponse = yield this.alignmentCollector.collect(alignmentRequestContext, (_h = buildConfig.additionalConfig) === null || _h === void 0 ? void 0 : _h.alignmentFilter);
|
|
32
31
|
const trackFactory = new MsaAlignmentTrackFactory(this.getPolymerEntityInstanceTranslator());
|
|
33
32
|
const targetList = uniqueTargetList(alignmentResponse);
|
|
@@ -40,6 +39,7 @@ export class RcsbFvGroupAlignment extends RcsbFvAbstractModule {
|
|
|
40
39
|
yield this.buildAlignmentTracks(alignmentRequestContext, alignmentResponse, {
|
|
41
40
|
alignmentTrackFactory: trackFactory
|
|
42
41
|
});
|
|
42
|
+
collectNextPage(alignmentRequestContext, this.alignmentCollector, this.annotationCollector).then(() => console.log("Next page ready"));
|
|
43
43
|
return void 0;
|
|
44
44
|
});
|
|
45
45
|
}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"RcsbFvGroupAlignment.js","sourceRoot":"","sources":["../../../src/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAlignment.ts"],"names":[],"mappings":";AAEA,OAAO,EAAC,oBAAoB,EAAC,MAAM,wBAAwB,CAAC;AAE5D,OAAO,EAGH,SAAS,EACT,cAAc,EACd,aAAa,EACb,mBAAmB,EACnB,YAAY,EACf,MAAM,+DAA+D,CAAC;AACvE,OAAO,EACH,wBAAwB,EAC3B,MAAM,iFAAiF,CAAC;AAKzF,OAAO,EAAC,UAAU,EAAC,MAAM,oCAAoC,CAAC;AAC9D,IAAO,aAAa,GAAG,UAAU,CAAC,aAAa,CAAC;AAChD,OAAO,EAAC,YAAY,EAAC,MAAM,mDAAmD,CAAC;AAC/E,OAAO,EAAC,QAAQ,EAAC,MAAM,kCAAkC,CAAC;AAC1D,OAAO,EAAC,qBAAqB,EAAC,MAAM,6CAA6C,CAAC;AAOlF,MAAM,OAAO,oBAAqB,SAAQ,oBAAoB;IAE1C,cAAc;;;YAC1B,MAAM,WAAW,GAA+B,IAAI,CAAC,WAAW,CAAC;YACjE,aAAa,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,aAAa,CAAC,WAAW,CAAC,KAAK,CAAC,EAAE,aAAa,CAAC,MAAA,WAAW,CAAC,gBAAgB,0CAAE,IAAI,CAAC,CAAC;YACxH,MAAM,uBAAuB,GAAmC;gBAC5D,KAAK,EAAE,WAAW,CAAC,KAAK;gBACxB,OAAO,EAAE,WAAW,CAAC,OAAO;gBAC5B,MAAM,EAAE,MAAA,WAAW,CAAC,gBAAgB,0CAAE,eAAe;gBACrD,IAAI,EAAE,MAAA,WAAW,CAAC,gBAAgB,0CAAE,IAAI;gBACxC,WAAW,EAAE,MAAA,WAAW,CAAC,gBAAgB,0CAAE,WAAW;gBACtD,IAAI,EAAE,WAAW,CAAC,IAAI;gBACtB,EAAE,EAAE,WAAW,CAAC,EAAE;gBAClB,cAAc,EAAC,KAAK;gBACpB,aAAa,EAAC,IAAI;gBAClB,mBAAmB,EAAE,IAAI;gBACzB,cAAc,EAAE,MAAA,MAAA,WAAW,CAAC,gBAAgB,0CAAE,cAAc,mCAAI,EAAE;gBAClE,oBAAoB,EAAE,MAAA,WAAW,CAAC,gBAAgB,0CAAE,oBAAoB;aAC3E,CAAC;
|
|
1
|
+
{"version":3,"file":"RcsbFvGroupAlignment.js","sourceRoot":"","sources":["../../../src/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAlignment.ts"],"names":[],"mappings":";AAEA,OAAO,EAAC,oBAAoB,EAAC,MAAM,wBAAwB,CAAC;AAE5D,OAAO,EAGH,SAAS,EACT,cAAc,EACd,aAAa,EACb,mBAAmB,EACnB,YAAY,EACf,MAAM,+DAA+D,CAAC;AACvE,OAAO,EACH,wBAAwB,EAC3B,MAAM,iFAAiF,CAAC;AAKzF,OAAO,EAAC,UAAU,EAAC,MAAM,oCAAoC,CAAC;AAC9D,IAAO,aAAa,GAAG,UAAU,CAAC,aAAa,CAAC;AAChD,OAAO,EAAC,YAAY,EAAC,MAAM,mDAAmD,CAAC;AAC/E,OAAO,EAAC,QAAQ,EAAC,MAAM,kCAAkC,CAAC;AAC1D,OAAO,EAAC,qBAAqB,EAAC,MAAM,6CAA6C,CAAC;AAOlF,MAAM,OAAO,oBAAqB,SAAQ,oBAAoB;IAE1C,cAAc;;;YAC1B,MAAM,WAAW,GAA+B,IAAI,CAAC,WAAW,CAAC;YACjE,aAAa,CAAC,WAAW,CAAC,OAAO,CAAC,EAAE,aAAa,CAAC,WAAW,CAAC,KAAK,CAAC,EAAE,aAAa,CAAC,MAAA,WAAW,CAAC,gBAAgB,0CAAE,IAAI,CAAC,CAAC;YACxH,MAAM,uBAAuB,GAAmC;gBAC5D,KAAK,EAAE,WAAW,CAAC,KAAK;gBACxB,OAAO,EAAE,WAAW,CAAC,OAAO;gBAC5B,MAAM,EAAE,MAAA,WAAW,CAAC,gBAAgB,0CAAE,eAAe;gBACrD,IAAI,EAAE,MAAA,WAAW,CAAC,gBAAgB,0CAAE,IAAI;gBACxC,WAAW,EAAE,MAAA,WAAW,CAAC,gBAAgB,0CAAE,WAAW;gBACtD,IAAI,EAAE,WAAW,CAAC,IAAI;gBACtB,EAAE,EAAE,WAAW,CAAC,EAAE;gBAClB,cAAc,EAAC,KAAK;gBACpB,aAAa,EAAC,IAAI;gBAClB,mBAAmB,EAAE,IAAI;gBACzB,cAAc,EAAE,MAAA,MAAA,WAAW,CAAC,gBAAgB,0CAAE,cAAc,mCAAI,EAAE;gBAClE,oBAAoB,EAAE,MAAA,WAAW,CAAC,gBAAgB,0CAAE,oBAAoB;aAC3E,CAAC;YAGF,MAAM,iBAAiB,GAAuB,MAAM,IAAI,CAAC,kBAAkB,CAAC,OAAO,CAAC,uBAAuB,EAAE,MAAA,WAAW,CAAC,gBAAgB,0CAAE,eAAe,CAAC,CAAC;YAE5J,MAAM,YAAY,GAA6B,IAAI,wBAAwB,CAAC,IAAI,CAAC,kCAAkC,EAAE,CAAC,CAAC;YAEvH,MAAM,UAAU,GAAa,gBAAgB,CAAC,iBAAiB,CAAC,CAAC;YACjE,MAAM,iBAAiB,GAA0B,MAAM,eAAe,CAAC;gBACnE,OAAO,EAAE,WAAW,CAAC,OAAO;gBAC5B,oBAAoB,EAAE,MAAA,WAAW,CAAC,gBAAgB,0CAAE,oBAAoB;gBACxE,UAAU;aACb,EAAE,IAAI,CAAC,mBAAmB,CAAC,CAAC;YAE7B,MAAM,YAAY,CAAC,eAAe,CAC9B,iBAAiB,CAAC,GAAG,CAAC,EAAE,CAAA,EAAE,WAAA,OAAA,iCAAK,EAAE,KAAE,OAAO,EAAC,MAAA,EAAE,CAAC,QAAQ,0CAAE,MAAM,CAAC,CAAC,CAAA,EAAE,CAAA,CAAA,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,IAAI,KAAE,YAAY,CAAC,oBAAoB,CAAC,IAAE,CAAA,EAAA,CAAC,EAChH,iBAAiB,CAAC,GAAG,CAAC,EAAE,CAAA,EAAE,WAAA,OAAA,iCAAK,EAAE,KAAE,OAAO,EAAC,MAAA,EAAE,CAAC,QAAQ,0CAAE,MAAM,CAAC,CAAC,CAAA,EAAE,CAAA,CAAA,CAAC,aAAD,CAAC,uBAAD,CAAC,CAAE,IAAI,KAAE,YAAY,CAAC,wBAAwB,CAAC,IAAE,CAAA,EAAA,CAAC,CACvH,CAAC;YAEF,MAAM,IAAI,CAAC,oBAAoB,CAAC,uBAAuB,EAAE,iBAAiB,EAAE;gBACxE,qBAAqB,EAAE,YAAY;aACtC,CAAC,CAAC;YAEH,eAAe,CAAC,uBAAuB,EAAE,IAAI,CAAC,kBAAkB,EAAE,IAAI,CAAC,mBAAmB,CAAC,CAAC,IAAI,CAAC,GAAE,EAAE,CAAA,OAAO,CAAC,GAAG,CAAC,iBAAiB,CAAC,CAAC,CAAC;YAErI,OAAO,KAAK,CAAC,CAAC;QAClB,CAAC;KAAA;IAES,kCAAkC;QACxC,IAAI,CAAC,aAAa,GAAI,IAAI,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,cAAc,CAAC,CAAC,MAAM,CAAC,IAAI,CAAC,eAAe,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,eAAe,CAAC;IAC1H,CAAC;IAEe,cAAc;;YAC1B,uCACQ,IAAI,CAAC,eAAe,KACxB,MAAM,EAAE,MAAM,IAAI,CAAC,kBAAkB,CAAC,kBAAkB,EAAE,EAC1D,WAAW,EAAE,IAAI,IACpB;QACL,CAAC;KAAA;CAEJ;AAED,SAAe,eAAe,CAAC,uBAAuD,EAAE,kBAA+C,EAAE,mBAAiD;;QACtL,MAAM,iBAAiB,GAAuB,MAAM,kBAAkB,CAAC,OAAO,iCACvE,uBAAuB,KAC1B,WAAW,EAAE,IAAI,EACjB,IAAI,EAAE;gBACF,KAAK,EAAE,uBAAuB,CAAC,IAAI,CAAC,KAAK;gBACzC,KAAK,EAAE,uBAAuB,CAAC,IAAI,CAAC,KAAK,GAAG,uBAAuB,CAAC,IAAI,CAAC,KAAK;aACjF,IACH,CAAA;QACF,MAAM,UAAU,GAAa,gBAAgB,CAAC,iBAAiB,CAAC,CAAC;QACjE,IAAG,uBAAuB,CAAC,OAAO,EAAE,CAAC;YACjC,MAAM,iBAAiB,GAA0B,MAAM,eAAe,CAAC;gBACnE,OAAO,EAAE,uBAAuB,CAAC,OAAO;gBACxC,UAAU;aACb,EAAE,mBAAmB,CAAC,CAAC;YACxB,MAAM,iBAAiB,GAAG,QAAQ,CAAC,YAAY,CAAS,iBAAiB,CAAC,GAAG,CAAC,EAAE,CAAA,EAAE,WAAA,OAAA,YAAY,CAAC,aAAa,CAAC,MAAA,EAAE,CAAC,SAAS,mCAAI,EAAE,CAAC,CAAC,OAAO,CAAA,EAAA,CAAC,CAAC,CAAC;YAC3I,QAAQ,CAAC,UAAU,CAAC,iBAAiB,EAAC,GAAG,CAAC,CAAC,OAAO,CAAC,GAAG,CAAC,EAAE,CAAC,qBAAqB,CAAC,kBAAkB,CAAC,GAAG,CAAC,CAAC,CAAC;QAC7G,CAAC;IACL,CAAC;CAAA;AAED,SAAS,gBAAgB,CAAC,iBAAqC;;IAC3D,OAAO,QAAQ,CAAC,YAAY,CAAS,MAAA,MAAA,iBAAiB,CAAC,iBAAiB,0CAAE,GAAG,CAAC,EAAE,CAAA,EAAE;QAC9E,aAAa,CAAC,EAAE,aAAF,EAAE,uBAAF,EAAE,CAAE,SAAS,CAAC,CAAC;QAC7B,OAAO,YAAY,CAAC,WAAW,CAAC,EAAE,CAAC,SAAS,CAAC,CAAC,OAAO,CAAA;IACzD,CAAC,CAAC,mCAAI,EAAE,CAAC,CAAC;AACd,CAAC;AAED,SAAe,eAAe,CAAC,kBAAkH,EAAE,mBAAiD;;QAChM,MAAM,yBAAyB,GAAqC;YAChE,OAAO,EAAE,kBAAkB,CAAC,OAAO;YACnC,KAAK,EAAE,cAAc,CAAC,gBAAgB;YACtC,OAAO,EAAE,CAAC,mBAAmB,CAAC,WAAW,CAAC;YAC1C,SAAS,EAAE,KAAK;YAChB,OAAO,EAAE,CAAC;oBACN,MAAM,EAAC,mBAAmB,CAAC,WAAW;oBACtC,SAAS,EAAE,aAAa,CAAC,MAAM;oBAC/B,KAAK,EAAC,SAAS,CAAC,IAAI;oBACpB,MAAM,EAAC,CAAC,YAAY,CAAC,oBAAoB,EAAC,YAAY,CAAC,wBAAwB,CAAC;iBACnF,EAAC;oBACE,MAAM,EAAC,mBAAmB,CAAC,WAAW;oBACtC,SAAS,EAAE,aAAa,CAAC,QAAQ;oBACjC,KAAK,EAAC,SAAS,CAAC,QAAQ;oBACxB,MAAM,EAAC,kBAAkB,CAAC,UAAU;iBACvC,CAAC;YACF,oBAAoB,EAAE,kBAAkB,CAAC,oBAAoB;SAChE,CAAA;QACD,OAAO,MAAM,mBAAmB,CAAC,OAAO,CAAC,yBAAyB,CAAC,CAAC;IACxE,CAAC;CAAA"}
|
|
@@ -14,7 +14,7 @@ class UiComponent extends react_1.default.Component {
|
|
|
14
14
|
}, children: this.props.text }));
|
|
15
15
|
}
|
|
16
16
|
}
|
|
17
|
-
(0, RcsbFvBuilder_1.buildSequenceIdentityAlignmentFv)("pfv", "
|
|
17
|
+
(0, RcsbFvBuilder_1.buildSequenceIdentityAlignmentFv)("pfv", "1_30", undefined, {
|
|
18
18
|
boardConfig: {
|
|
19
19
|
selectionChangeCallback: (selection) => {
|
|
20
20
|
console.log(selection);
|
|
@@ -30,7 +30,6 @@ class RcsbFvGroupAlignment extends RcsbFvAbstractModule_1.RcsbFvAbstractModule {
|
|
|
30
30
|
sequencePrefix: (_f = (_e = buildConfig.additionalConfig) === null || _e === void 0 ? void 0 : _e.sequencePrefix) !== null && _f !== void 0 ? _f : "",
|
|
31
31
|
externalTrackBuilder: (_g = buildConfig.additionalConfig) === null || _g === void 0 ? void 0 : _g.externalTrackBuilder
|
|
32
32
|
};
|
|
33
|
-
collectNextPage(alignmentRequestContext, this.alignmentCollector, this.annotationCollector).then(() => console.log("Next page ready"));
|
|
34
33
|
const alignmentResponse = yield this.alignmentCollector.collect(alignmentRequestContext, (_h = buildConfig.additionalConfig) === null || _h === void 0 ? void 0 : _h.alignmentFilter);
|
|
35
34
|
const trackFactory = new MsaAlignmentTrackFactory_1.MsaAlignmentTrackFactory(this.getPolymerEntityInstanceTranslator());
|
|
36
35
|
const targetList = uniqueTargetList(alignmentResponse);
|
|
@@ -43,6 +42,7 @@ class RcsbFvGroupAlignment extends RcsbFvAbstractModule_1.RcsbFvAbstractModule {
|
|
|
43
42
|
yield this.buildAlignmentTracks(alignmentRequestContext, alignmentResponse, {
|
|
44
43
|
alignmentTrackFactory: trackFactory
|
|
45
44
|
});
|
|
45
|
+
collectNextPage(alignmentRequestContext, this.alignmentCollector, this.annotationCollector).then(() => console.log("Next page ready"));
|
|
46
46
|
return void 0;
|
|
47
47
|
});
|
|
48
48
|
}
|