@rcsb/rcsb-saguaro-app 4.4.0-models.3 → 4.4.0-models.6

package/build/dist/RcsbAnnotationConfig/RcsbAnnotationConfig.d.ts

@@ -1,6 +1,7 @@
-import { Feature } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { RcsbFvDisplayTypes, RcsbFvTrackDataElementInterface } from '@rcsb/rcsb-saguaro';
+import { AnnotationFeatures, Feature } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { RcsbFvDisplayTypes } from '@rcsb/rcsb-saguaro';
 import { AnnotationConfigInterface, RcsbAnnotationConfigInterface } from "./AnnotationConfigInterface";
+import { AnnotationRequestContext } from "../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
 export interface RcsbMergedTypesInterface {
     merged_types: Array<string>;
     title: string;
@@ -10,28 +11,21 @@ export interface RcsbMergedTypesInterface {
 export declare class RcsbAnnotationConfig {
     private readonly annotationConfigMap;
     private readonly annotationMap;
-    private readonly externalAnnotationsOrder;
-    private readonly instanceAnnotationsOrder;
-    private readonly entityAnnotationsOrder;
+    private readonly annotationTypes;
     private readonly mergedTypes;
-    private readonly addedTypes;
     constructor(acm?: AnnotationConfigInterface);
     getConfig(type: string): RcsbAnnotationConfigInterface;
     allTypes(): Set<string>;
     uniprotOrder(): Array<string>;
     instanceOrder(): Array<string>;
     entityOrder(): Array<string>;
-    buildAndAddType(d: Feature, trackTitle?: string, titleSuffix?: string, typeSuffix?: string): string;
-    private addNewType;
-    sortAndIncludeNewTypes(): void;
-    private checkAndIncludeNewType;
-    private cleanAddedTypes;
+    getAnnotationType(requestConfig: AnnotationRequestContext, ann: AnnotationFeatures, feature: Feature): Promise<string>;
     isMergedType(type: string): boolean;
     getMergeConfig(type: string): RcsbMergedTypesInterface;
-    annotationMergedPreference(type: string, a: RcsbFvTrackDataElementInterface, b: RcsbFvTrackDataElementInterface): boolean;
+    private addNewType;
+    private checkAndIncludeNewType;
     static randomRgba(str?: string): string;
-    addProvenance(type: string, provenanceName: string): void;
+    private addProvenance;
     addMultipleProvenance(type: string, provenanceList: Array<string>): void;
-    getProvenanceList(type: string): Array<string>;
-    isTransformedToNumerical(type: string): boolean;
+    private initTypes;
 }

package/build/dist/RcsbFvExamples/EntitySummaryFv.d.ts

@@ -0,0 +1 @@
+export {};

package/build/dist/RcsbFvExamples/GroupHistogram.d.ts

@@ -0,0 +1 @@
+export {};

package/build/dist/RcsbFvExamples/InstanceSequenceFv.d.ts

@@ -0,0 +1 @@
+export {};

package/build/dist/RcsbFvExamples/SingleEntitySummaryFv.d.ts

@@ -0,0 +1 @@
+export {};

package/build/dist/RcsbFvWeb/RcsbFvBuilder/RcsbFvContextManager.d.ts

@@ -1,7 +1,7 @@
 import { RcsbFv, RcsbFvBoardConfigInterface } from "@rcsb/rcsb-saguaro";
 declare class RcsbFvContextManager {
-    private rcsbFvManager;
-    private rcsbButtonManager;
+    private readonly rcsbFvManager;
+    private readonly rcsbButtonManager;
     getFv(elementFvId: string, boardConfig?: Partial<RcsbFvBoardConfigInterface>): RcsbFv;
     hasFv(elementFvId: string): boolean;
     private setFv;

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationBlockManager.d.ts

@@ -17,6 +17,5 @@ export declare class AnnotationBlockManager implements BlockManagerInterface<[An
     private orderedTypes;
     private processAnnotations;
     private addFeature;
-    private buildType;
     private mergeTracks;
 }

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/TrackManagerInterface.d.ts

@@ -7,7 +7,7 @@ export interface TrackManagerFactoryInterface<T extends any[]> {
 }
 export interface TrackManagerInterface {
     getId(): string;
-    getConfig(): RcsbAnnotationConfigInterface;
+    getConfig(): RcsbAnnotationConfigInterface | undefined;
     getRange(): {
         min: number;
         max: number;

package/build/dist/RcsbFvWeb/WebTools/WebToolsManager.d.ts

@@ -9,9 +9,10 @@ export interface SelectButtonConfigInterface {
     isAdditionalButton?: boolean;
 }
 export declare class WebToolsManager {
-    private static suffix;
-    private static suffixAdditionalButton;
-    private static loaderSpinner;
+    private static readonly suffix;
+    private static readonly suffixAdditionalButton;
+    private static readonly loaderSpinner;
+    private static readonly nodeMap;
     static buildSelectButton(elementId: string, options: Array<SelectOptionInterface> | Array<GroupedOptionsInterface>, config?: SelectButtonConfigInterface): void;
     static addSelectButton(elementId: string, options: Array<SelectOptionInterface>, config?: SelectButtonConfigInterface): void;
     private static innerBuildSelectButton;

package/build/dist/RcsbGroupWeb/RcsbGroupView/RcsbGroupMembers/Components/Slider.d.ts

@@ -1,9 +1,11 @@
 import * as React from "react";
+import { ReactNode } from "react";
 export declare type SlideAction = "next" | "prev";
 export interface SliderInterface {
     slide(action: SlideAction): void;
     pages: number;
     currentPage: number;
+    children: ReactNode;
 }
 export declare class Slider extends React.Component<SliderInterface, null> {
     render(): JSX.Element;

package/build/dist/RcsbRequest/RcsbRequestContextManager.d.ts

@@ -11,6 +11,7 @@ import { SearchQueryType } from "../RcsbSeacrh/SearchRequestProperty";
 import { FacetType } from "../RcsbSeacrh/FacetStore/FacetMemberInterface";
 import { ReturnType } from "@rcsb/rcsb-api-tools/build/RcsbSearch/Types/SearchEnums";
 import { SearchQuery } from "@rcsb/rcsb-api-tools/build/RcsbSearch/Types/SearchQueryInterface";
+import { RequestInit as GraphqlRequestInit } from "graphql-request/src/types.dom";
 declare class RcsbRequestContextManager {
     private readonly polymerEntityToInstanceMap;
     private readonly entryToAssemblyMap;
@@ -40,11 +41,11 @@ declare class RcsbRequestContextManager {
     private getAssemblyInterfaces;
     initializeBorregoClient(config: {
         api?: string;
-        requestConfig?: RequestInit;
+        requestConfig?: GraphqlRequestInit;
     }): void;
     initializeYosemiteClient(config: {
         api?: string;
-        requestConfig?: RequestInit;
+        requestConfig?: GraphqlRequestInit;
     }): void;
     initializeArchesClient(config: {
         uri?: string;

package/build/dist/RcsbUtils/Helpers/TagDelimiter.d.ts

@@ -5,6 +5,8 @@ export declare class TagDelimiter {
     static readonly alignmentTitle: string;
     static readonly operatorComposition: string;
     static readonly assembly: string;
+    private static rcsbEntityRegExp;
+    private static rcsbInstanceRegExp;
     static parseEntity(rcsbId: string): {
         entryId: string;
         entityId: string;
@@ -13,4 +15,5 @@ export declare class TagDelimiter {
         instanceId: string;
         entryId: string;
     };
+    static isEntityOrInstanceId(rcsb: string): boolean;
 }