@rcsb/rcsb-saguaro-app 4.4.0-models.3 → 4.4.0-models.4

package/build/dist/RcsbAnnotationConfig/RcsbAnnotationConfig.d.ts

@@ -1,6 +1,7 @@
-import { Feature } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { RcsbFvDisplayTypes, RcsbFvTrackDataElementInterface } from '@rcsb/rcsb-saguaro';
+import { AnnotationFeatures, Feature } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { RcsbFvDisplayTypes } from '@rcsb/rcsb-saguaro';
 import { AnnotationConfigInterface, RcsbAnnotationConfigInterface } from "./AnnotationConfigInterface";
+import { AnnotationRequestContext } from "../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
 export interface RcsbMergedTypesInterface {
     merged_types: Array<string>;
     title: string;
@@ -10,28 +11,21 @@ export interface RcsbMergedTypesInterface {
 export declare class RcsbAnnotationConfig {
     private readonly annotationConfigMap;
     private readonly annotationMap;
-    private readonly externalAnnotationsOrder;
-    private readonly instanceAnnotationsOrder;
-    private readonly entityAnnotationsOrder;
+    private readonly annotationTypes;
     private readonly mergedTypes;
-    private readonly addedTypes;
     constructor(acm?: AnnotationConfigInterface);
     getConfig(type: string): RcsbAnnotationConfigInterface;
     allTypes(): Set<string>;
     uniprotOrder(): Array<string>;
     instanceOrder(): Array<string>;
     entityOrder(): Array<string>;
-    buildAndAddType(d: Feature, trackTitle?: string, titleSuffix?: string, typeSuffix?: string): string;
-    private addNewType;
-    sortAndIncludeNewTypes(): void;
-    private checkAndIncludeNewType;
-    private cleanAddedTypes;
+    getAnnotationType(requestConfig: AnnotationRequestContext, ann: AnnotationFeatures, feature: Feature): Promise<string>;
     isMergedType(type: string): boolean;
     getMergeConfig(type: string): RcsbMergedTypesInterface;
-    annotationMergedPreference(type: string, a: RcsbFvTrackDataElementInterface, b: RcsbFvTrackDataElementInterface): boolean;
+    private addNewType;
+    private checkAndIncludeNewType;
     static randomRgba(str?: string): string;
-    addProvenance(type: string, provenanceName: string): void;
+    private addProvenance;
     addMultipleProvenance(type: string, provenanceList: Array<string>): void;
-    getProvenanceList(type: string): Array<string>;
-    isTransformedToNumerical(type: string): boolean;
+    private initTypes;
 }

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationBlockManager.d.ts

@@ -17,6 +17,5 @@ export declare class AnnotationBlockManager implements BlockManagerInterface<[An
     private orderedTypes;
     private processAnnotations;
     private addFeature;
-    private buildType;
     private mergeTracks;
 }

package/build/dist/RcsbUtils/Helpers/TagDelimiter.d.ts

@@ -5,6 +5,8 @@ export declare class TagDelimiter {
     static readonly alignmentTitle: string;
     static readonly operatorComposition: string;
     static readonly assembly: string;
+    private static rcsbEntityRegExp;
+    private static rcsbInstanceRegExp;
     static parseEntity(rcsbId: string): {
         entryId: string;
         entityId: string;
@@ -13,4 +15,5 @@ export declare class TagDelimiter {
         instanceId: string;
         entryId: string;
     };
+    static isEntityOrInstanceId(rcsb: string): boolean;
 }