@rcsb/rcsb-saguaro-app 4.4.0-models.2 → 4.4.0-models.22

package/build/dist/RcsbAnnotationConfig/AnnotationConfigInterface.d.ts

@@ -31,3 +31,33 @@ export interface RcsbAnnotationConfigInterface {
     ignore?: boolean;
     fitTitleWidth?: boolean;
 }
+export interface RcsbDistributionConfigInterface {
+    blockConfig: RcsbTrackBlockConfigInterface[];
+    trackConfig: RcsbTrackConfigInterface[];
+}
+export interface RcsbTrackBlockConfigInterface {
+    type: string;
+    title: string;
+    trackType: string[];
+    sort: string[];
+    contentType: "binary" | "numerical";
+    undefTrack?: {
+        label: string;
+        color: string;
+        id: string;
+    };
+    axisLabel?: string;
+}
+export interface RcsbTrackConfigInterface {
+    type: string;
+    color?: string;
+    label?: string;
+    numericalCategories?: {
+        thresholds: number[];
+        categories: {
+            label: string;
+            color: string;
+            id: string;
+        }[];
+    };
+}

package/build/dist/RcsbAnnotationConfig/RcsbAnnotationConfig.d.ts

@@ -1,6 +1,7 @@
-import { Feature } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { RcsbFvDisplayTypes, RcsbFvTrackDataElementInterface } from '@rcsb/rcsb-saguaro';
+import { AnnotationFeatures, Feature } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { RcsbFvDisplayTypes } from '@rcsb/rcsb-saguaro';
 import { AnnotationConfigInterface, RcsbAnnotationConfigInterface } from "./AnnotationConfigInterface";
+import { AnnotationRequestContext } from "../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
 export interface RcsbMergedTypesInterface {
     merged_types: Array<string>;
     title: string;
@@ -10,28 +11,21 @@ export interface RcsbMergedTypesInterface {
 export declare class RcsbAnnotationConfig {
     private readonly annotationConfigMap;
     private readonly annotationMap;
-    private readonly externalAnnotationsOrder;
-    private readonly instanceAnnotationsOrder;
-    private readonly entityAnnotationsOrder;
+    private readonly annotationTypes;
     private readonly mergedTypes;
-    private readonly addedTypes;
     constructor(acm?: AnnotationConfigInterface);
     getConfig(type: string): RcsbAnnotationConfigInterface;
     allTypes(): Set<string>;
     uniprotOrder(): Array<string>;
     instanceOrder(): Array<string>;
     entityOrder(): Array<string>;
-    buildAndAddType(d: Feature, trackTitle?: string, titleSuffix?: string, typeSuffix?: string): string;
+    getAnnotationType(requestConfig: AnnotationRequestContext, ann: AnnotationFeatures, feature: Feature): Promise<string>;
+    isMergedType(type: string): boolean;
+    getMergeConfig(type: string): RcsbMergedTypesInterface;
     private addNewType;
-    sortAndIncludeNewTypes(): void;
     private checkAndIncludeNewType;
-    private cleanAddedTypes;
-    isMergedType(type: string): boolean;
-    getMergedType(type: string): string;
-    annotationMergedPreference(type: string, a: RcsbFvTrackDataElementInterface, b: RcsbFvTrackDataElementInterface): boolean;
     static randomRgba(str?: string): string;
-    addProvenance(type: string, provenanceName: string): void;
+    private addProvenance;
     addMultipleProvenance(type: string, provenanceList: Array<string>): void;
-    getProvenanceList(type: string): Array<string>;
-    isTransformedToNumerical(type: string): boolean;
+    private initTypes;
 }

package/build/dist/RcsbAnnotationConfig/RcsbDistributionConfig.d.ts

@@ -0,0 +1,12 @@
+import { RcsbDistributionConfigInterface, RcsbTrackBlockConfigInterface, RcsbTrackConfigInterface } from "./AnnotationConfigInterface";
+export declare class RcsbDistributionConfig {
+    private readonly distributionConfig;
+    private trackToBlockType;
+    private trackConfig;
+    private blockConfig;
+    constructor(dcm?: RcsbDistributionConfigInterface);
+    getBlockType(trackType: string): string;
+    getBlockConfig(type: string): RcsbTrackBlockConfigInterface;
+    getTrackConfig(type: string): RcsbTrackConfigInterface;
+    private processConfig;
+}

package/build/dist/RcsbChartWeb/RcsbChartComponent/AbstractChartComponent.d.ts

@@ -1,6 +1,6 @@
 import { ChartConfigInterface, ChartObjectInterface } from "./ChartConfigInterface";
 import * as React from "react";
-import { ChartDataProviderInterface } from "../RcsbChartData/ChartDataProviderInterface";
+import { ChartDataProviderInterface } from "../RcsbChartDataProvider/ChartDataProviderInterface";
 import { AbstractChartImplementationType } from "./AbstractChartImplementation";
 interface AbstractChartState {
     data: ChartObjectInterface[];
@@ -21,8 +21,8 @@ export declare abstract class AbstractChartComponent extends React.Component<Abs
     readonly state: AbstractChartState;
     componentDidMount(): void;
     componentWillUnmount(): void;
-    protected unsubscribe(): void;
-    protected subscribe(): void;
+    private unsubscribe;
+    private subscribe;
     private updateChartMap;
     private asyncUpdate;
 }

package/build/dist/RcsbChartWeb/RcsbChartComponent/AbstractChartImplementation.d.ts

@@ -1,5 +1,5 @@
 import React from "react";
-import { ChartDataReaderInterface } from "../RcsbChartData/ChartDataProviderInterface";
+import { ChartDataReaderInterface } from "../RcsbChartDataProvider/ChartDataProviderInterface";
 import { ChartConfigInterface } from "./ChartConfigInterface";
 export interface AbstractChartImplementationInterface {
     height: number;

package/build/dist/RcsbChartWeb/RcsbChartComponent/BarChartComponent.d.ts

@@ -1,5 +1,5 @@
 /// <reference types="react" />
-import { ChartDataProviderInterface } from "../RcsbChartData/ChartDataProviderInterface";
+import { ChartDataProviderInterface } from "../RcsbChartDataProvider/ChartDataProviderInterface";
 import { AbstractChartComponent } from "./AbstractChartComponent";
 export declare class BarChartComponent extends AbstractChartComponent {
     protected readonly dataProvider: ChartDataProviderInterface;

package/build/dist/RcsbChartWeb/RcsbChartComponent/ChartConfigInterface.d.ts

@@ -1,8 +1,12 @@
-import { ChartDataInterface } from "../RcsbChartData/ChartDataInterface";
+import { ChartDataInterface } from "../RcsbChartDataProvider/ChartDataProviderInterface";
 import * as React from "react";
 export interface ChartObjectInterface {
     label: string | number;
     population: number;
+    objectConfig?: {
+        objectId?: string;
+        color?: string;
+    };
 }
 export declare type BarClickCallbackType = (datum: ChartDataInterface, data: ChartDataInterface[], e: React.MouseEvent<any>) => void;
 export interface ChartConfigInterface {
@@ -18,6 +22,22 @@ export interface ChartConfigInterface {
     };
     axisLabel?: string;
     barClickCallback?: BarClickCallbackType;
+    sort?: (b: ChartDataInterface, a: ChartDataInterface) => number;
+    tooltipText?: (a: ChartDataInterface) => string;
+    chartDisplayConfig?: Partial<ChartDisplayConfigInterface>;
+}
+export interface ChartDisplayConfigInterface {
+    paddingLeft: number;
+    paddingTopLarge: number;
+    paddingTop: number;
+    paddingRight: number;
+    constWidth: number;
+    constHeight: number;
+    xIncrement: number;
+    xDomainPadding: number;
+    barWidth: number;
+    fontFamily: string;
+    fontSize: number;
 }
 export declare enum ChartType {
     pie = "pie",

package/build/dist/RcsbChartWeb/RcsbChartComponent/HistogramChartComponent.d.ts

@@ -1,5 +1,5 @@
 /// <reference types="react" />
-import { ChartDataProviderInterface } from "../RcsbChartData/ChartDataProviderInterface";
+import { ChartDataProviderInterface } from "../RcsbChartDataProvider/ChartDataProviderInterface";
 import { AbstractChartComponent } from "./AbstractChartComponent";
 export declare class HistogramChartComponent extends AbstractChartComponent {
     protected readonly dataProvider: ChartDataProviderInterface;

package/build/dist/RcsbChartWeb/RcsbChartComponent/VictoryChartImplementations/Components/TooltipFactory.d.ts

@@ -1,6 +1,11 @@
 import * as React from "react";
 import { VictoryTooltipProps } from "victory-tooltip";
-export declare class TooltipFactory extends React.Component<VictoryTooltipProps, any> {
-    static getTooltip(props: VictoryTooltipProps): JSX.Element;
+import { ChartConfigInterface } from "../../ChartConfigInterface";
+declare type TooltipPropsType = VictoryTooltipProps & {
+    tooltipText?: ChartConfigInterface["tooltipText"];
+};
+export declare class TooltipFactory extends React.Component<TooltipPropsType, any> {
+    static getTooltip(props: TooltipPropsType): JSX.Element;
     private static text;
 }
+export {};

package/build/dist/RcsbChartWeb/{RcsbChartData/BarChartData.d.ts → RcsbChartDataProvider/BarChartDataProvider.d.ts}

@@ -1,11 +1,10 @@
 import { ChartConfigInterface, ChartObjectInterface } from "../RcsbChartComponent/ChartConfigInterface";
-import { ChartDataProviderInterface } from "./ChartDataProviderInterface";
-import { ChartDataInterface } from "./ChartDataInterface";
-export declare class BarChartData implements ChartDataProviderInterface {
+import { ChartDataProviderInterface, ChartDataInterface } from "./ChartDataProviderInterface";
+export declare class BarChartDataProvider implements ChartDataProviderInterface {
     private stringTicks;
     private excludedData;
     private data;
-    setData(chartData: ChartObjectInterface[], chartSubData: ChartObjectInterface[], config: ChartConfigInterface): void;
+    setData(chartData: ChartObjectInterface[], chartSubData: ChartObjectInterface[], config?: ChartConfigInterface): void;
     getChartData(): {
         data: ChartDataInterface[];
         excludedData: ChartDataInterface[];

package/build/dist/RcsbChartWeb/{RcsbChartData → RcsbChartDataProvider}/ChartDataProviderInterface.d.ts

@@ -1,5 +1,13 @@
 import { ChartConfigInterface, ChartObjectInterface } from "../RcsbChartComponent/ChartConfigInterface";
-import { ChartDataInterface } from "./ChartDataInterface";
+export interface ChartDataInterface {
+    x: string | number;
+    y: number;
+    yc?: number;
+    label?: string;
+    isLabel?: boolean;
+    color?: string;
+    id?: string;
+}
 export interface ChartDataProviderInterface extends ChartDataReaderInterface {
     setData(data: ChartObjectInterface[], subData: ChartObjectInterface[], config: ChartConfigInterface): void;
 }

package/build/dist/RcsbChartWeb/{RcsbChartData/HistogramChartData.d.ts → RcsbChartDataProvider/HistogramChartDataProvider.d.ts}

@@ -1,10 +1,9 @@
-import { ChartDataProviderInterface } from "./ChartDataProviderInterface";
+import { ChartDataProviderInterface, ChartDataInterface } from "./ChartDataProviderInterface";
 import { ChartConfigInterface, ChartObjectInterface } from "../RcsbChartComponent/ChartConfigInterface";
-import { ChartDataInterface } from "./ChartDataInterface";
-export declare class HistogramChartData implements ChartDataProviderInterface {
+export declare class HistogramChartDataProvider implements ChartDataProviderInterface {
     private config;
     private data;
-    setData(chartData: ChartObjectInterface[], chartSubData: ChartObjectInterface[], config: ChartConfigInterface): void;
+    setData(chartData: ChartObjectInterface[], chartSubData: ChartObjectInterface[], config?: ChartConfigInterface): void;
     getChartData(): {
         data: ChartDataInterface[];
     };

package/build/dist/RcsbChartWeb/RcsbChartTools/ChartTools.d.ts

@@ -1,33 +1,23 @@
-import { ChartObjectInterface } from "../RcsbChartComponent/ChartConfigInterface";
-import { ChartDataInterface } from "../RcsbChartData/ChartDataInterface";
+import { ChartDisplayConfigInterface, ChartObjectInterface } from "../RcsbChartComponent/ChartConfigInterface";
+import { ChartDataInterface } from "../RcsbChartDataProvider/ChartDataProviderInterface";
 export declare class ChartTools {
-    static readonly paddingLeft: number;
-    static readonly paddingTopLarge: number;
-    static readonly paddingTop: number;
-    static readonly paddingRight: number;
-    static readonly constWidth: number;
-    static readonly constHeight: number;
-    static readonly xIncrement: number;
-    static readonly xDomainPadding: number;
-    static readonly barWidth: number;
-    static readonly fontFamily: string;
-    static readonly fontSize: number;
-    static mergeGroupSize(data: ChartObjectInterface[], size: number, mergeName?: string): {
-        x: string;
-        y: number;
-    }[];
-    static mostPopulatedGroups(data: ChartObjectInterface[], maxGroups: number, mergeName?: string): {
-        x: string;
-        y: number;
-    }[];
-    static mergeDomainMaxValue(data: ChartObjectInterface[], maxValue: number): {
-        x: number;
-        y: number;
-    }[];
+    private static readonly paddingLeft;
+    private static readonly paddingTopLarge;
+    private static readonly paddingTop;
+    private static readonly paddingRight;
+    private static readonly constWidth;
+    private static readonly constHeight;
+    private static readonly xIncrement;
+    private static readonly xDomainPadding;
+    private static readonly barWidth;
+    private static readonly fontFamily;
+    private static readonly fontSize;
+    static getConfig<T>(key: keyof ChartDisplayConfigInterface, chartDisplayConfig: Partial<ChartDisplayConfigInterface>): T;
+    static mergeGroupSize(data: ChartObjectInterface[], size: number, mergeName?: string): ChartDataInterface[];
+    static mostPopulatedGroups(data: ChartObjectInterface[], maxGroups: number, mergeName?: string): ChartDataInterface[];
+    static mergeDomainMaxValue(data: ChartObjectInterface[], maxValue: number): ChartDataInterface[];
     static labelsAsString(data: ChartObjectInterface[]): ChartDataInterface[];
-    static labelsAsNumber(data: ChartObjectInterface[]): {
-        x: number;
-        y: number;
-    }[];
+    static labelsAsNumber(data: ChartObjectInterface[]): ChartDataInterface[];
     static addComplementaryData(data: ChartDataInterface[], subData: ChartDataInterface[]): void;
+    static mergeData(data: ChartDataInterface[]): ChartDataInterface[];
 }

package/build/dist/RcsbExport/RcsbFvUI.d.ts

@@ -1,5 +1,5 @@
-import { GroupedOptionsInterface, SelectOptionInterface } from "../RcsbFvWeb/WebTools/SelectButton";
-import { SelectButtonConfigInterface } from "../RcsbFvWeb/WebTools/WebToolsManager";
+import { GroupedOptionsInterface, SelectOptionInterface } from "../RcsbFvWeb/RcsbFvComponents/SelectButton";
+import { SelectButtonConfigInterface } from "../RcsbFvWeb/RcsbFvComponents/ComponentsManager";
 export declare class RcsbFvUI {
     static clearSelectButton(elementFvId: string, selectButtonId: string): void;
     static createSelectButton(elementFvId: string, selectButtonId: string, options: Array<SelectOptionInterface> | Array<GroupedOptionsInterface>, config?: SelectButtonConfigInterface): void;

package/build/dist/RcsbFvExamples/EntitySummaryFv.d.ts

@@ -0,0 +1 @@
+export {};

package/build/dist/RcsbFvExamples/GroupHistogram.d.ts

@@ -0,0 +1 @@
+export {};

package/build/dist/RcsbFvExamples/InstanceSequenceFv.d.ts

@@ -0,0 +1 @@
+export {};

package/build/dist/RcsbFvExamples/ResidueDistribution.d.ts

@@ -0,0 +1 @@
+export {};

package/build/dist/RcsbFvExamples/SingleEntitySummaryFv.d.ts

@@ -0,0 +1 @@
+export {};

package/build/dist/RcsbFvWeb/RcsbFvBuilder/RcsbFvContextManager.d.ts

@@ -1,7 +1,7 @@
 import { RcsbFv, RcsbFvBoardConfigInterface } from "@rcsb/rcsb-saguaro";
 declare class RcsbFvContextManager {
-    private rcsbFvManager;
-    private rcsbButtonManager;
+    private readonly rcsbFvManager;
+    private readonly rcsbButtonManager;
     getFv(elementFvId: string, boardConfig?: Partial<RcsbFvBoardConfigInterface>): RcsbFv;
     hasFv(elementFvId: string): boolean;
     private setFv;

package/build/dist/RcsbFvWeb/RcsbFvBuilder/RcsbFvCoreBuilder.d.ts

@@ -1,8 +1,8 @@
 import { PolymerEntityInstanceTranslate } from "../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
 import { RcsbFv } from "@rcsb/rcsb-saguaro";
 import { RcsbFvModuleBuildInterface, RcsbFvModuleInterface, RcsbFvModulePublicInterface } from "../RcsbFvModule/RcsbFvModuleInterface";
-import { SelectButtonConfigInterface } from "../WebTools/WebToolsManager";
-import { GroupedOptionsInterface, SelectOptionInterface } from "../WebTools/SelectButton";
+import { SelectButtonConfigInterface } from "../RcsbFvComponents/ComponentsManager";
+import { GroupedOptionsInterface, SelectOptionInterface } from "../RcsbFvComponents/SelectButton";
 export interface CreateFvInterface {
     elementId: string;
     fvModuleI: new (elementId: string, rcsbFv: RcsbFv) => RcsbFvModuleInterface;

package/build/dist/RcsbFvWeb/RcsbFvBuilder/RcsbFvInstanceBuilder.d.ts

@@ -1,7 +1,7 @@
 /// <reference types="react" />
 import { RcsbContextType, RcsbFvAdditionalConfig } from "../RcsbFvModule/RcsbFvModuleInterface";
 import { PolymerEntityInstanceInterface } from "../../RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector";
-import { SelectOptionProps } from "../WebTools/SelectButton";
+import { SelectOptionProps } from "../RcsbFvComponents/SelectButton";
 import { RcsbFvModulePublicInterface } from "../RcsbFvModule/RcsbFvModuleInterface";
 export interface InstanceSequenceOnchangeInterface extends PolymerEntityInstanceInterface {
 }

package/build/dist/RcsbFvWeb/{WebTools/WebToolsManager.d.ts → RcsbFvComponents/ComponentsManager.d.ts}

@@ -8,17 +8,14 @@ export interface SelectButtonConfigInterface {
     optionProps?: (props: SelectOptionProps) => JSX.Element;
     isAdditionalButton?: boolean;
 }
-export declare class WebToolsManager {
-    private static suffix;
-    private static suffixAdditionalButton;
-    private static loaderSpinner;
+export declare class ComponentsManager {
+    private static readonly loaderSpinner;
+    private static readonly selectButtonMap;
+    private static readonly nodeMap;
     static buildSelectButton(elementId: string, options: Array<SelectOptionInterface> | Array<GroupedOptionsInterface>, config?: SelectButtonConfigInterface): void;
     static addSelectButton(elementId: string, options: Array<SelectOptionInterface>, config?: SelectButtonConfigInterface): void;
-    private static innerBuildSelectButton;
-    private static jsxButton;
     static clearSelectButton(elementId: string): void;
     static clearAdditionalSelectButton(elementId: string): void;
-    static innerClearSelectButton(elementId: string, suffix: string): void;
     static buildLoaderSpinner(elementId: string): void;
     static unmountLoaderSpinner(elementId: string): void;
     private static hideElement;

package/build/dist/RcsbFvWeb/RcsbFvComponents/MountableComponent.d.ts

@@ -0,0 +1,8 @@
+import { ReactNode } from "react";
+export declare class MountableComponent {
+    private readonly element;
+    private root;
+    constructor(element: HTMLElement);
+    render(node: ReactNode): void;
+    unmount(): void;
+}

package/build/dist/RcsbFvWeb/{WebTools → RcsbFvComponents}/SelectButton.d.ts

@@ -8,8 +8,8 @@ export declare type SelectOptionProps = OptionProps<OptionPropsInterface, false,
 interface SelectButtonInterface {
     elementId: string;
     options?: Array<SelectOptionInterface> | Array<GroupedOptionsInterface>;
-    additionalOptions?: Array<SelectOptionInterface>;
     addTitle: boolean;
+    renderTitle: (title: string) => void;
     defaultValue?: string | undefined | null;
     width?: number;
     dropdownTitle?: string;
@@ -35,8 +35,9 @@ interface SelectButtonState {
     selectedOption: OptionPropsInterface;
 }
 export declare class SelectButton extends React.Component<SelectButtonInterface, SelectButtonState> {
-    static readonly BUTTON_CONTAINER_DIV_SUFFIX = "_buttonContainerDiv";
+    private static readonly BUTTON_CONTAINER_DIV_SUFFIX;
     private defaultValue;
+    private currentOption;
     readonly state: SelectButtonState;
     constructor(props: SelectButtonInterface);
     private change;
@@ -44,10 +45,10 @@ export declare class SelectButton extends React.Component<SelectButtonInterface,
     componentDidMount(): void;
     render(): JSX.Element;
     private selectRender;
-    private titleRender;
     private selectButtonRender;
     private innerSelectButtonRender;
     private configStyle;
     private getSelectOpt;
+    private renderTitle;
 }
 export {};

package/build/dist/RcsbFvWeb/RcsbFvComponents/SelectButtonManager.d.ts

@@ -0,0 +1,17 @@
+import { GroupedOptionsInterface, SelectOptionInterface } from "./SelectButton";
+import { SelectButtonConfigInterface } from "./ComponentsManager";
+export declare class SelectButtonManager {
+    private readonly elementId;
+    private static readonly MAIN_BUTTON_SUFFIX;
+    private static readonly ADDITIONAL_BUTTON_SUFFIX;
+    private static readonly SELECT_TITLE_DIV;
+    private readonly selectComponent;
+    constructor(elementId: string);
+    createButton(options: Array<SelectOptionInterface> | Array<GroupedOptionsInterface>, config?: SelectButtonConfigInterface): void;
+    addButton(options: Array<SelectOptionInterface> | Array<GroupedOptionsInterface>, config?: SelectButtonConfigInterface): void;
+    unmountButton(): void;
+    unmountAdditionalButton(): void;
+    private button;
+    private renderTitle;
+    private createDiv;
+}

package/build/dist/RcsbFvWeb/RcsbFvComponents/SelectButtonTitle.d.ts

@@ -0,0 +1,6 @@
+import * as React from "react";
+export declare class SelectButtonTitle extends React.Component<{
+    title: string;
+}> {
+    render(): JSX.Element;
+}

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AlignmentBlockFactory.d.ts

@@ -1,10 +1,10 @@
-import { AlignmentResponse, AnnotationFeatures, TargetAlignment } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { AlignmentRequestContextType } from "../RcsbFvTrackFactory/AlignmentTrackFactory";
+import { AlignmentResponse, TargetAlignment } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
+import { AlignmentRequestContextType } from "../RcsbFvTrackFactory/TrackFactoryImpl/AlignmentTrackFactory";
 import { BlockFactoryInterface } from "./BlockFactoryInterface";
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro";
 import { TrackFactoryInterface } from "../RcsbFvTrackFactory/TrackFactoryInterface";
-export declare class AlignmentBlockFactory implements BlockFactoryInterface<[AlignmentRequestContextType, AlignmentResponse, Array<AnnotationFeatures>]> {
-    private readonly alignmentTrackFactory;
-    constructor(alignmentTrackFactory: TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignment, Array<AnnotationFeatures>]> | TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignment]>);
-    getBlock(alignmentRequestContext: AlignmentRequestContextType, alignmentData: AlignmentResponse, features?: Array<AnnotationFeatures>): Promise<RcsbFvRowConfigInterface[]>;
+export declare class AlignmentBlockFactory implements BlockFactoryInterface<[AlignmentRequestContextType, AlignmentResponse], [AlignmentRequestContextType, TargetAlignment]> {
+    readonly trackFactory: TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignment]>;
+    constructor(alignmentTrackFactory: TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignment]>);
+    getBlock(alignmentRequestContext: AlignmentRequestContextType, alignmentData: AlignmentResponse): Promise<RcsbFvRowConfigInterface[]>;
 }

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AnnotationsBlockFactory.d.ts

@@ -5,10 +5,10 @@ import { AnnotationFeatures } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types
 import { TrackFactoryInterface } from "../RcsbFvTrackFactory/TrackFactoryInterface";
 import { BlockManagerInterface } from "./BlockManager/BlockManagerInterface";
 import { TrackManagerInterface } from "./BlockManager/TrackManagerInterface";
-export declare class AnnotationsBlockFactory implements BlockFactoryInterface<[AnnotationRequestContext, AnnotationFeatures[]]> {
+export declare class AnnotationsBlockFactory implements BlockFactoryInterface<[AnnotationRequestContext, AnnotationFeatures[]], [TrackManagerInterface]> {
     private readonly annotationBlockManager;
     private readonly annotationsBlockData;
-    private readonly annotationTrackFactory;
+    readonly trackFactory: TrackFactoryInterface<[TrackManagerInterface]>;
     constructor(annotationBlockManager: BlockManagerInterface<[AnnotationRequestContext, AnnotationFeatures[]]>, annotationTrackFactory: TrackFactoryInterface<[TrackManagerInterface]>);
     getBlock(annotationsRequestContext: AnnotationRequestContext, annotations: AnnotationFeatures[]): Promise<RcsbFvRowConfigInterface[]>;
 }

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockFactoryInterface.d.ts

@@ -1,4 +1,6 @@
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro";
-export interface BlockFactoryInterface<T extends any[]> {
+import { TrackFactoryInterface } from "../RcsbFvTrackFactory/TrackFactoryInterface";
+export interface BlockFactoryInterface<T extends any[], S extends any[]> {
+    readonly trackFactory: TrackFactoryInterface<S>;
     getBlock(...args: T): Promise<RcsbFvRowConfigInterface[]>;
 }

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationBlockManager.d.ts

@@ -15,8 +15,7 @@ export declare class AnnotationBlockManager implements BlockManagerInterface<[An
     getTracks(): Array<TrackManagerInterface>;
     private has;
     private orderedTypes;
-    private addAnnotationToTracks;
+    private processAnnotations;
     private addFeature;
-    private buildType;
     private mergeTracks;
 }

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/TrackManagerInterface.d.ts

@@ -6,8 +6,8 @@ export interface TrackManagerFactoryInterface<T extends any[]> {
     getTrackManager(...args: T): TrackManagerInterface;
 }
 export interface TrackManagerInterface {
-    getTrackId(): string;
-    getConfig(): RcsbAnnotationConfigInterface;
+    getId(): string;
+    getConfig(): RcsbAnnotationConfigInterface | undefined;
     getRange(): {
         min: number;
         max: number;

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/{AlignmentTrackFactory.d.ts → TrackFactoryImpl/AlignmentTrackFactory.d.ts}

@@ -1,19 +1,19 @@
 import { RcsbFvLink, RcsbFvRowConfigInterface, RcsbFvTrackDataElementInterface } from "@rcsb/rcsb-saguaro";
 import { AlignedRegion, TargetAlignment } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { PolymerEntityInstanceTranslate, AlignmentContextInterface } from "../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
-import { TrackFactoryInterface } from "./TrackFactoryInterface";
-import { AlignmentCollectConfig } from "../../../RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface";
+import { PolymerEntityInstanceTranslate, AlignmentContextInterface } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
+import { TrackFactoryInterface } from "../TrackFactoryInterface";
+import { AlignmentCollectConfig } from "../../../../RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface";
 export declare type AlignmentRequestContextType = AlignmentCollectConfig & {
     querySequence?: string;
 };
 export declare class AlignmentTrackFactory implements TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignment]> {
     private readonly sequenceTrackFactory;
     private readonly entityInstanceTranslator;
+    private readonly trackTitleFactory;
     constructor(entityInstanceTranslator?: PolymerEntityInstanceTranslate);
     getTrack(alignmentRequestContext: AlignmentRequestContextType, targetAlignment: TargetAlignment, alignedRegionToTrackElementList?: (region: AlignedRegion, alignmentContext: AlignmentContextInterface) => Array<RcsbFvTrackDataElementInterface>): Promise<RcsbFvRowConfigInterface>;
-    buildAlignmentRowTitle(alignmentQueryContext: AlignmentRequestContextType, targetAlignment: TargetAlignment): string | RcsbFvLink;
+    buildAlignmentRowTitle(alignmentQueryContext: AlignmentRequestContextType, targetAlignment: TargetAlignment): Promise<string | RcsbFvLink>;
     private getAlignmentTrackConfiguration;
-    private buildInstanceId;
     alignedRegionToTrackElementList(region: AlignedRegion, alignmentContext: AlignmentContextInterface): Array<RcsbFvTrackDataElementInterface>;
     addAuthorResIds(e: RcsbFvTrackDataElementInterface, alignmentContext: AlignmentContextInterface): RcsbFvTrackDataElementInterface;
 }

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/{AnnotationsTrackFactory.d.ts → TrackFactoryImpl/AnnotationsTrackFactory.d.ts}

@@ -1,6 +1,6 @@
-import { TrackFactoryInterface } from "./TrackFactoryInterface";
+import { TrackFactoryInterface } from "../TrackFactoryInterface";
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro";
-import { TrackManagerInterface } from "../RcsbFvBlockFactory/BlockManager/TrackManagerInterface";
+import { TrackManagerInterface } from "../../RcsbFvBlockFactory/BlockManager/TrackManagerInterface";
 export declare class AnnotationsTrackFactory implements TrackFactoryInterface<[TrackManagerInterface]> {
     getTrack(annotations: TrackManagerInterface): Promise<RcsbFvRowConfigInterface>;
 }

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/{ObservedAlignmentTrackFactory.d.ts → TrackFactoryImpl/ObservedAlignmentTrackFactory.d.ts}

@@ -1,6 +1,6 @@
 import { AnnotationFeatures, TargetAlignment } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { PolymerEntityInstanceTranslate } from "../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
-import { TrackFactoryInterface } from "./TrackFactoryInterface";
+import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
+import { TrackFactoryInterface } from "../TrackFactoryInterface";
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro";
 import { AlignmentRequestContextType } from "./AlignmentTrackFactory";
 export declare class ObservedAlignmentTrackFactory implements TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignment]> {

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/{PlainAlignmentTrackFactory.d.ts → TrackFactoryImpl/PlainAlignmentTrackFactory.d.ts}

@@ -1,23 +1,23 @@
 import { RcsbFvColorGradient, RcsbFvLink, RcsbFvRowConfigInterface, RcsbFvTrackDataElementInterface } from "@rcsb/rcsb-saguaro";
 import { AlignedRegion, TargetAlignment } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { PolymerEntityInstanceTranslate, AlignmentContextInterface } from "../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
-import { TrackFactoryInterface } from "./TrackFactoryInterface";
-import { AlignmentCollectConfig } from "../../../RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface";
+import { PolymerEntityInstanceTranslate, AlignmentContextInterface } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
+import { TrackFactoryInterface } from "../TrackFactoryInterface";
+import { AlignmentCollectConfig } from "../../../../RcsbCollectTools/AlignmentCollector/AlignmentCollectorInterface";
 export declare type AlignmentRequestContextType = AlignmentCollectConfig & {
     querySequence?: string;
 };
 export declare class PlainAlignmentTrackFactory implements TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignment]> {
     private readonly sequenceTrackFactory;
     private readonly entityInstanceTranslator;
+    private readonly trackTitleFactory;
     constructor(entityInstanceTranslator?: PolymerEntityInstanceTranslate);
     getTrack(alignmentRequestContext: AlignmentRequestContextType, targetAlignment: TargetAlignment, alignedRegionToTrackElementList?: (region: AlignedRegion, alignmentContext: AlignmentContextInterface) => Array<RcsbFvTrackDataElementInterface>, alignmentColor?: RcsbFvColorGradient): Promise<RcsbFvRowConfigInterface>;
-    buildAlignmentRowTitle(alignmentQueryContext: AlignmentRequestContextType, targetAlignment: TargetAlignment): string | RcsbFvLink;
+    buildAlignmentRowTitle(alignmentQueryContext: AlignmentRequestContextType, targetAlignment: TargetAlignment): Promise<string | RcsbFvLink>;
     getAlignmentTrackConfiguration(alignmentQueryContext: AlignmentRequestContextType, targetAlignment: TargetAlignment, alignedRegionToTrackElementList: (region: AlignedRegion, alignmentContext: AlignmentContextInterface) => Array<RcsbFvTrackDataElementInterface>): {
         alignedBlocks: Array<RcsbFvTrackDataElementInterface>;
         mismatchData: Array<RcsbFvTrackDataElementInterface>;
         sequenceData: Array<RcsbFvTrackDataElementInterface>;
     };
-    private buildInstanceId;
     alignedRegionToTrackElementList(region: AlignedRegion, alignmentContext: AlignmentContextInterface): Array<RcsbFvTrackDataElementInterface>;
     addAuthorResIds(e: RcsbFvTrackDataElementInterface, alignmentContext: AlignmentContextInterface): RcsbFvTrackDataElementInterface;
 }

package/build/dist/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/{PlainObservedAlignmentTrackFactory.d.ts → TrackFactoryImpl/PlainObservedAlignmentTrackFactory.d.ts}

@@ -1,6 +1,6 @@
 import { AnnotationFeatures, TargetAlignment } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { PolymerEntityInstanceTranslate } from "../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
-import { TrackFactoryInterface } from "./TrackFactoryInterface";
+import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
+import { TrackFactoryInterface } from "../TrackFactoryInterface";
 import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro";
 import { AlignmentRequestContextType } from "./AlignmentTrackFactory";
 export declare class PlainObservedAlignmentTrackFactory implements TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignment]> {