@rcsb/rcsb-saguaro-app 4.2.1 → 4.3.1

package/build/dist/RcsbFvWeb/RcsbFvBuilder/RcsbFvInstanceBuilder.d.ts

@@ -3,26 +3,23 @@ import { RcsbContextType, RcsbFvAdditionalConfig } from "../RcsbFvModule/RcsbFvM
 import { PolymerEntityInstanceInterface } from "../../RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector";
 import { SelectOptionProps } from "../WebTools/SelectButton";
 import { RcsbFvModulePublicInterface } from "../RcsbFvModule/RcsbFvModuleInterface";
-export interface InstanceSequenceOnchangeInterface {
-    pdbId: string;
-    authId: string;
-    asymId: string;
+export interface InstanceSequenceOnchangeInterface extends PolymerEntityInstanceInterface {
 }
-declare type instanceModule = "interface" | "instance";
+declare type InstanceModuleType = "interface" | "instance";
 export interface InstanceSequenceConfig {
     dropdownTitle?: string;
     defaultValue?: string | undefined | null;
-    beforeChangeCallback?: (x: InstanceSequenceOnchangeInterface) => undefined | RcsbContextType;
-    onChangeCallback?: (x: InstanceSequenceOnchangeInterface) => void;
+    beforeChangeCallback?: (x: InstanceSequenceOnchangeInterface, module: RcsbFvModulePublicInterface | undefined) => undefined | RcsbContextType;
+    onChangeCallback?: (x: InstanceSequenceOnchangeInterface, module: RcsbFvModulePublicInterface) => void;
     filterInstances?: Set<string>;
     displayAuthId?: boolean;
     selectButtonOptionProps?: (props: SelectOptionProps) => JSX.Element;
-    module?: instanceModule;
+    module?: InstanceModuleType;
 }
 export declare class RcsbFvInstanceBuilder {
     static buildMultipleInstanceSequenceFv(elementFvId: string, elementEntrySelectId: string, elementInstanceSelectId: string, entryIdList: Array<string>, config?: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
     static buildInstanceSequenceFv(elementFvId: string, elementSelectId: string, entryId: string, config: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
     static buildSelectorInstanceFv(instanceList: Array<PolymerEntityInstanceInterface>, elementFvId: string, elementSelectId: string, entryId: string, config: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
-    static buildInstanceFv(elementId: string, instanceId: string, additionalConfig?: RcsbFvAdditionalConfig, module?: instanceModule): Promise<RcsbFvModulePublicInterface>;
+    static buildInstanceFv(elementId: string, instanceId: string, additionalConfig?: RcsbFvAdditionalConfig, module?: InstanceModuleType): Promise<RcsbFvModulePublicInterface>;
 }
 export {};

package/build/dist/RcsbFvWeb/RcsbFvBuilder/RcsbFvUniprotBuilder.d.ts

@@ -1,14 +1,12 @@
 import { RcsbContextType, RcsbFvAdditionalConfig } from "../RcsbFvModule/RcsbFvModuleInterface";
+import { PolymerEntityInstanceInterface } from "../../RcsbCollectTools/DataCollectors/PolymerEntityInstancesCollector";
 import { RcsbFvModulePublicInterface } from "../RcsbFvModule/RcsbFvModuleInterface";
-export interface UniprotSequenceOnchangeInterface {
-    pdbId?: string;
-    authId?: string;
-    asymId?: string;
+export interface UniprotSequenceOnchangeInterface extends Partial<PolymerEntityInstanceInterface> {
     upAcc: string;
 }
 export interface UniprotSequenceConfig {
-    beforeChangeCallback?: (x: UniprotSequenceOnchangeInterface) => undefined | RcsbContextType;
-    onChangeCallback?: (x: UniprotSequenceOnchangeInterface) => void;
+    beforeChangeCallback?: (x: UniprotSequenceOnchangeInterface, module: RcsbFvModulePublicInterface | undefined) => undefined | RcsbContextType;
+    onChangeCallback?: (x: UniprotSequenceOnchangeInterface, module: RcsbFvModulePublicInterface) => void;
 }
 export declare class RcsbFvUniprotBuilder {
     static buildUniprotMultipleEntitySequenceFv(elementFvId: string, elementSelectId: string, upAcc: string, config?: UniprotSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;

package/build/dist/RcsbFvWeb/RcsbFvBuilder.d.ts

@@ -9,8 +9,8 @@ export declare function unmount(elementId: string): void;
 export declare function buildMultipleAlignmentSequenceFv(elementFvId: string, elementSelectId: string, upAcc: string, config?: UniprotSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
 export declare function buildEntitySummaryFv(elementFvId: string, elementSelectId: string, entityId: string): Promise<RcsbFvModulePublicInterface>;
 export declare function buildSingleEntitySummaryFv(elementId: string, entityId: string): Promise<RcsbFvModulePublicInterface>;
-export declare function buildInstanceSequenceFv(elementFvId: string, elementSelectId: string, entryId: string, config: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
-export declare function buildMultipleInstanceSequenceFv(elementFvId: string, elementEntrySelectId: string, elementInstanceSelectId: string, entryIdList: Array<string>, config: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
+export declare function buildInstanceSequenceFv(elementFvId: string, elementSelectId: string, entryId: string, config?: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
+export declare function buildMultipleInstanceSequenceFv(elementFvId: string, elementEntrySelectId: string, elementInstanceSelectId: string, entryIdList: Array<string>, config?: InstanceSequenceConfig, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
 export declare function buildAssemblySequenceFv(elementFvId: string, elementSelectAssemblyId: string, elementSelectInstanceId: string, entryId: string, onAsseblyChangeCallback?: (x: string) => void, onInstanceChangeCallback?: (x: InstanceSequenceOnchangeInterface) => void): Promise<RcsbFvModulePublicInterface>;
 export declare function buildUniprotFv(elementId: string, upAcc: string, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;
 export declare function buildEntityFv(elementId: string, entityId: string, additionalConfig?: RcsbFvAdditionalConfig): Promise<RcsbFvModulePublicInterface>;

package/build/dist/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAlignment.d.ts

@@ -1,12 +1,8 @@
 import { RcsbFvAbstractModule } from "./RcsbFvAbstractModule";
-import { RcsbFvAdditionalConfig, RcsbFvModuleBuildInterface } from "./RcsbFvModuleInterface";
-import { RcsbFv } from "@rcsb/rcsb-saguaro";
+import { RcsbFvModuleBuildInterface } from "./RcsbFvModuleInterface";
 import { AnnotationCollectorInterface } from "../../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
-import { SequenceCollectorInterface } from "../../RcsbCollectTools/SequenceCollector/SequenceCollectorInterface";
 export declare class RcsbFvGroupAlignment extends RcsbFvAbstractModule {
     protected readonly annotationCollector: AnnotationCollectorInterface;
-    protected readonly sequenceCollector: SequenceCollectorInterface;
-    constructor(elementId: string, rcsbFv: RcsbFv, additionalConfig?: RcsbFvAdditionalConfig);
     protected protectedBuild(buildConfig: RcsbFvModuleBuildInterface): Promise<void>;
     protected concatAlignmentAndAnnotationTracks(buildConfig: RcsbFvModuleBuildInterface): void;
 }

package/build/dist/RcsbFvWeb/RcsbFvModule/RcsbFvGroupAnnotation.d.ts

@@ -1,12 +1,8 @@
 import { RcsbFvAbstractModule } from "./RcsbFvAbstractModule";
-import { RcsbFvAdditionalConfig, RcsbFvModuleBuildInterface } from "./RcsbFvModuleInterface";
-import { RcsbFv } from "@rcsb/rcsb-saguaro";
+import { RcsbFvModuleBuildInterface } from "./RcsbFvModuleInterface";
 import { AnnotationCollectorInterface } from "../../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
-import { SequenceCollectorInterface } from "../../RcsbCollectTools/SequenceCollector/SequenceCollectorInterface";
 export declare class RcsbFvGroupAnnotation extends RcsbFvAbstractModule {
     protected readonly annotationCollector: AnnotationCollectorInterface;
-    protected readonly sequenceCollector: SequenceCollectorInterface;
-    constructor(elementId: string, rcsbFv: RcsbFv, additionalConfig?: RcsbFvAdditionalConfig);
     protectedBuild(buildConfig: RcsbFvModuleBuildInterface): Promise<void>;
     protected concatAlignmentAndAnnotationTracks(buildConfig: RcsbFvModuleBuildInterface): void;
 }

package/build/dist/RcsbFvWeb/RcsbFvModule/RcsbFvModuleInterface.d.ts

@@ -3,7 +3,6 @@ import { PolymerEntityInstanceTranslate } from "../../RcsbUtils/Translators/Poly
 import { RcsbFv, RcsbFvBoardConfigInterface, RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro";
 import { PairwiseAlignmentInterface } from "../PairwiseAlignmentTools/PairwiseAlignmentBuilder";
 import { AnnotationProcessingInterface } from "../../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
-import { SequenceCollectorInterface } from "../../RcsbCollectTools/SequenceCollector/SequenceCollectorInterface";
 import { ExternalTrackBuilderInterface } from "../../RcsbCollectTools/FeatureTools/ExternalTrackBuilderInterface";
 export declare type RcsbContextType = Partial<{
     entryId: string;
@@ -25,7 +24,6 @@ export interface RcsbFvAdditionalConfig {
     boardConfig?: Partial<RcsbFvBoardConfigInterface>;
     sequencePrefix?: string;
     annotationProcessing?: AnnotationProcessingInterface;
-    sequenceCollector?: SequenceCollectorInterface;
     externalTrackBuilder?: ExternalTrackBuilderInterface;
     page?: {
         first: number;

package/build/dist/RcsbFvWeb/RcsbFvModule/RcsbFvUniprot.d.ts

@@ -1,10 +1,8 @@
 import { RcsbFvAbstractModule } from "./RcsbFvAbstractModule";
 import { RcsbFvModuleBuildInterface } from "./RcsbFvModuleInterface";
-import { RcsbFv } from "@rcsb/rcsb-saguaro";
 import { SequenceCollectorInterface } from "../../RcsbCollectTools/SequenceCollector/SequenceCollectorInterface";
 export declare class RcsbFvUniprot extends RcsbFvAbstractModule {
     protected readonly sequenceCollector: SequenceCollectorInterface;
-    constructor(elementId: string, rcsbFv: RcsbFv);
     protected protectedBuild(buildConfig: RcsbFvModuleBuildInterface): Promise<void>;
     protected concatAlignmentAndAnnotationTracks(buildConfig: RcsbFvModuleBuildInterface): void;
 }

package/build/dist/RcsbUtils/Helpers/SingletonMap.d.ts

@@ -0,0 +1,4 @@
+export declare class SingletonMap {
+    private static readonly map;
+    static update(key: string, obj: any): void;
+}