@rasensio/aidlc 1.24.0 → 1.25.0

package/dist/doctor/migrations/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/doctor/migrations/index.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AA4B7C,eAAO,MAAM,UAAU,EAAE,SAAS,EAoDjC,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/doctor/migrations/index.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AA6B7C,eAAO,MAAM,UAAU,EAAE,SAAS,EA0DjC,CAAC"}

package/dist/doctor/migrations/index.js

@@ -25,6 +25,7 @@ import { roadmapLayout } from './roadmap-layout.js';
 import { roadmapItemTitles } from './roadmap-item-titles.js';
 import { instanceCompletion } from './instance-completion.js';
 import { roadmapSyncGhMissing } from './roadmap-sync-gh-missing.js';
+import { knowledgeStaleSources } from './knowledge-stale-sources.js';
 import { complianceLayerUnowned, complianceNoticeMissing, compliancePackMissingLayer, compliancePackUnregistered, } from './compliance-pack-drift.js';
 export const MIGRATIONS = [
     costGitignore,
@@ -78,5 +79,11 @@ export const MIGRATIONS = [
     // Report tier: no legitimate remedy exists, so it states the condition and never
     // gates doctor's exit code (compliance-packs/AC-91).
     complianceNoticeMissing,
+    // Report tier, ordered last: the only migration that reads the whole knowledge graph,
+    // so putting the one parse-bound check at the end leaves every cheap repair already
+    // reported by the time it runs. It depends on nothing above it — `knowledge-gitignore`
+    // touches only `.aidlc/knowledge/.gitignore`, never a source file — so the position is
+    // about reading order, not correctness (stale-graph-entries/AC-10).
+    knowledgeStaleSources,
 ];
 //# sourceMappingURL=index.js.map

package/dist/doctor/migrations/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/doctor/migrations/index.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAGH,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,kBAAkB,EAAE,MAAM,0BAA0B,CAAC;AAC9D,OAAO,EAAE,aAAa,EAAE,MAAM,oBAAoB,CAAC;AACnD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,mBAAmB,EAAE,MAAM,4BAA4B,CAAC;AACjE,OAAO,EAAE,iBAAiB,EAAE,MAAM,0BAA0B,CAAC;AAC7D,OAAO,EAAE,cAAc,EAAE,MAAM,uBAAuB,CAAC;AACvD,OAAO,EAAE,wBAAwB,EAAE,MAAM,wBAAwB,CAAC;AAClE,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,kBAAkB,EAAE,MAAM,2BAA2B,CAAC;AAC/D,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,iBAAiB,EAAE,MAAM,0BAA0B,CAAC;AAC7D,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AACxD,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,cAAc,EAAE,MAAM,uBAAuB,CAAC;AACvD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,iBAAiB,EAAE,MAAM,0BAA0B,CAAC;AAC7D,OAAO,EAAE,kBAAkB,EAAE,MAAM,0BAA0B,CAAC;AAC9D,OAAO,EAAE,oBAAoB,EAAE,MAAM,8BAA8B,CAAC;AACpE,OAAO,EACL,sBAAsB,EACtB,uBAAuB,EACvB,0BAA0B,EAC1B,0BAA0B,GAC3B,MAAM,4BAA4B,CAAC;AAEpC,MAAM,CAAC,MAAM,UAAU,GAAgB;IACrC,aAAa;IACb,kBAAkB;IAClB,aAAa;IACb,cAAc;IACd,eAAe;IACf,4EAA4E;IAC5E,2EAA2E;IAC3E,8EAA8E;IAC9E,cAAc;IACd,aAAa;IACb,0EAA0E;IAC1E,qEAAqE;IACrE,+EAA+E;IAC/E,0EAA0E;IAC1E,mDAAmD;IACnD,iBAAiB;IACjB,8EAA8E;IAC9E,0EAA0E;IAC1E,yEAAyE;IACzE,kBAAkB;IAClB,qFAAqF;IACrF,uFAAuF;IACvF,8EAA8E;IAC9E,oBAAoB;IACpB,mBAAmB;IACnB,iBAAiB;IACjB,cAAc;IACd,wBAAwB;IACxB,aAAa;IACb,kBAAkB;IAClB,6EAA6E;IAC7E,6EAA6E;IAC7E,4EAA4E;IAC5E,eAAe;IACf,eAAe;IACf,gFAAgF;IAChF,iEAAiE;IACjE,iBAAiB;IACjB,yEAAyE;IACzE,0EAA0E;IAC1E,eAAe;IACf,oFAAoF;IACpF,oFAAoF;IACpF,qFAAqF;IACrF,sCAAsC;IACtC,0BAA0B;IAC1B,0BAA0B;IAC1B,sBAAsB;IACtB,iFAAiF;IACjF,qDAAqD;IACrD,uBAAuB;CACxB,CAAC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../../src/doctor/migrations/index.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAGH,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,kBAAkB,EAAE,MAAM,0BAA0B,CAAC;AAC9D,OAAO,EAAE,aAAa,EAAE,MAAM,oBAAoB,CAAC;AACnD,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtD,OAAO,EAAE,mBAAmB,EAAE,MAAM,4BAA4B,CAAC;AACjE,OAAO,EAAE,iBAAiB,EAAE,MAAM,0BAA0B,CAAC;AAC7D,OAAO,EAAE,cAAc,EAAE,MAAM,uBAAuB,CAAC;AACvD,OAAO,EAAE,wBAAwB,EAAE,MAAM,wBAAwB,CAAC;AAClE,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,kBAAkB,EAAE,MAAM,2BAA2B,CAAC;AAC/D,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,iBAAiB,EAAE,MAAM,0BAA0B,CAAC;AAC7D,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,eAAe,EAAE,MAAM,uBAAuB,CAAC;AACxD,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,cAAc,EAAE,MAAM,uBAAuB,CAAC;AACvD,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AACpD,OAAO,EAAE,iBAAiB,EAAE,MAAM,0BAA0B,CAAC;AAC7D,OAAO,EAAE,kBAAkB,EAAE,MAAM,0BAA0B,CAAC;AAC9D,OAAO,EAAE,oBAAoB,EAAE,MAAM,8BAA8B,CAAC;AACpE,OAAO,EAAE,qBAAqB,EAAE,MAAM,8BAA8B,CAAC;AACrE,OAAO,EACL,sBAAsB,EACtB,uBAAuB,EACvB,0BAA0B,EAC1B,0BAA0B,GAC3B,MAAM,4BAA4B,CAAC;AAEpC,MAAM,CAAC,MAAM,UAAU,GAAgB;IACrC,aAAa;IACb,kBAAkB;IAClB,aAAa;IACb,cAAc;IACd,eAAe;IACf,4EAA4E;IAC5E,2EAA2E;IAC3E,8EAA8E;IAC9E,cAAc;IACd,aAAa;IACb,0EAA0E;IAC1E,qEAAqE;IACrE,+EAA+E;IAC/E,0EAA0E;IAC1E,mDAAmD;IACnD,iBAAiB;IACjB,8EAA8E;IAC9E,0EAA0E;IAC1E,yEAAyE;IACzE,kBAAkB;IAClB,qFAAqF;IACrF,uFAAuF;IACvF,8EAA8E;IAC9E,oBAAoB;IACpB,mBAAmB;IACnB,iBAAiB;IACjB,cAAc;IACd,wBAAwB;IACxB,aAAa;IACb,kBAAkB;IAClB,6EAA6E;IAC7E,6EAA6E;IAC7E,4EAA4E;IAC5E,eAAe;IACf,eAAe;IACf,gFAAgF;IAChF,iEAAiE;IACjE,iBAAiB;IACjB,yEAAyE;IACzE,0EAA0E;IAC1E,eAAe;IACf,oFAAoF;IACpF,oFAAoF;IACpF,qFAAqF;IACrF,sCAAsC;IACtC,0BAA0B;IAC1B,0BAA0B;IAC1B,sBAAsB;IACtB,iFAAiF;IACjF,qDAAqD;IACrD,uBAAuB;IACvB,sFAAsF;IACtF,oFAAoF;IACpF,uFAAuF;IACvF,uFAAuF;IACvF,oEAAoE;IACpE,qBAAqB;CACtB,CAAC"}

package/dist/doctor/migrations/knowledge-stale-sources.d.ts

@@ -0,0 +1,45 @@
+/**
+ * `knowledge-stale-sources` (report tier): the knowledge graph describes something
+ * that is not there.
+ *
+ * Two conditions, one read: an entity whose `source` names a path that does not
+ * resolve, and an edge whose `from`/`to` names no entity. See
+ * `knowledge/source-resolution.ts` for why `staleness.ts`'s two existing signals
+ * cannot see either — in short, a deleted directory stops appearing in `git diff`,
+ * so the change signal goes quiet precisely when the entry becomes wrong.
+ *
+ * **Why `report` and not `confirm`.** The remedy is a decision, and doctor may not
+ * make it. Of the 15 entities this found on its first run, 12 wanted deleting and 3
+ * wanted their path corrected to a different manifest — indistinguishable from the
+ * data alone. A `confirm`-tier remover applies unprompted under `--yes`, so the
+ * first unattended `aidlc doctor --yes` would have deleted three entities whose real
+ * fix was a one-line edit, and deleting knowledge is the loss this graph exists to
+ * prevent. Precedent: `roadmap-sync-gh-missing` and two of the four
+ * `compliance-pack-drift` conditions use `report` for exactly this shape. Nothing
+ * here writes anything, under any tier or flag, and it never gates doctor's exit
+ * code.
+ *
+ * **`ctx.projectRoot`, not the primary checkout.** The opposite of
+ * `roadmap-sync-gh-missing`, deliberately: `.aidlc/knowledge/*.yaml` is committed, so
+ * the graph is per-branch and the copy that matters is the one in the tree being
+ * checked. Roadmap items live in the primary checkout because an inbox stranded on a
+ * feature branch is indistinguishable from a lost one; a graph is the reverse — a
+ * branch that deletes a package and its entries should read clean on that branch.
+ *
+ * **No subprocess and no index.** `YamlSourceStore` plus `existsSync`, nothing else.
+ * The constant it needs came from `engine.ts`, which imports `SqliteIndex`; that
+ * import would have put `node:sqlite`'s experimental warning on the default path of
+ * `aidlc doctor`, so `KNOWLEDGE_DIR` moved to `types.ts` instead. An import-graph
+ * test pins this, because a behavioural test would keep passing until somebody
+ * happened to exercise the new path.
+ *
+ * Requirements: stale-graph-entries/AC-10 … stale-graph-entries/AC-19
+ */
+import type { CheckResult, DoctorContext, Migration } from '../types.js';
+/**
+ * The single source of pending-ness (`../types.ts`), so a dry run and a real run
+ * cannot disagree. Exported for the tests, which drive it against fixture roots.
+ */
+export declare function staleSourcesCheck(ctx: DoctorContext): CheckResult;
+export declare const knowledgeStaleSources: Migration;
+//# sourceMappingURL=knowledge-stale-sources.d.ts.map

package/dist/doctor/migrations/knowledge-stale-sources.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"knowledge-stale-sources.d.ts","sourceRoot":"","sources":["../../../src/doctor/migrations/knowledge-stale-sources.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;GAoCG;AAWH,OAAO,KAAK,EAAE,WAAW,EAAE,aAAa,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AAEzE;;;GAGG;AACH,wBAAgB,iBAAiB,CAAC,GAAG,EAAE,aAAa,GAAG,WAAW,CA0CjE;AAED,eAAO,MAAM,qBAAqB,EAAE,SAInC,CAAC"}

package/dist/doctor/migrations/knowledge-stale-sources.js

@@ -0,0 +1,87 @@
+/**
+ * `knowledge-stale-sources` (report tier): the knowledge graph describes something
+ * that is not there.
+ *
+ * Two conditions, one read: an entity whose `source` names a path that does not
+ * resolve, and an edge whose `from`/`to` names no entity. See
+ * `knowledge/source-resolution.ts` for why `staleness.ts`'s two existing signals
+ * cannot see either — in short, a deleted directory stops appearing in `git diff`,
+ * so the change signal goes quiet precisely when the entry becomes wrong.
+ *
+ * **Why `report` and not `confirm`.** The remedy is a decision, and doctor may not
+ * make it. Of the 15 entities this found on its first run, 12 wanted deleting and 3
+ * wanted their path corrected to a different manifest — indistinguishable from the
+ * data alone. A `confirm`-tier remover applies unprompted under `--yes`, so the
+ * first unattended `aidlc doctor --yes` would have deleted three entities whose real
+ * fix was a one-line edit, and deleting knowledge is the loss this graph exists to
+ * prevent. Precedent: `roadmap-sync-gh-missing` and two of the four
+ * `compliance-pack-drift` conditions use `report` for exactly this shape. Nothing
+ * here writes anything, under any tier or flag, and it never gates doctor's exit
+ * code.
+ *
+ * **`ctx.projectRoot`, not the primary checkout.** The opposite of
+ * `roadmap-sync-gh-missing`, deliberately: `.aidlc/knowledge/*.yaml` is committed, so
+ * the graph is per-branch and the copy that matters is the one in the tree being
+ * checked. Roadmap items live in the primary checkout because an inbox stranded on a
+ * feature branch is indistinguishable from a lost one; a graph is the reverse — a
+ * branch that deletes a package and its entries should read clean on that branch.
+ *
+ * **No subprocess and no index.** `YamlSourceStore` plus `existsSync`, nothing else.
+ * The constant it needs came from `engine.ts`, which imports `SqliteIndex`; that
+ * import would have put `node:sqlite`'s experimental warning on the default path of
+ * `aidlc doctor`, so `KNOWLEDGE_DIR` moved to `types.ts` instead. An import-graph
+ * test pins this, because a behavioural test would keep passing until somebody
+ * happened to exercise the new path.
+ *
+ * Requirements: stale-graph-entries/AC-10 … stale-graph-entries/AC-19
+ */
+import { join } from 'node:path';
+import { describeResolution, isResolved, resolveGraphAgainstDisk, } from '../../knowledge/source-resolution.js';
+import { KNOWLEDGE_DIR } from '../../knowledge/types.js';
+import { YamlSourceStore } from '../../knowledge/yaml-source.js';
+/**
+ * The single source of pending-ness (`../types.ts`), so a dry run and a real run
+ * cannot disagree. Exported for the tests, which drive it against fixture roots.
+ */
+export function staleSourcesCheck(ctx) {
+    const store = new YamlSourceStore(join(ctx.projectRoot, KNOWLEDGE_DIR));
+    // A project that never ran `aidlc discover` has no graph to be wrong about, and
+    // pays no parse for the check (AC-16).
+    if (!store.exists()) {
+        return { applicable: false, reason: 'no knowledge graph in .aidlc/knowledge/' };
+    }
+    // `loadAll` collects unreadable and unparseable files as warnings rather than
+    // throwing (AC-18). A corrupt file is a different defect with a better message
+    // elsewhere — `aidlc knowledge` prints the parser's own error where it matters —
+    // so it is named here and the run continues on the documents that did parse.
+    const graph = store.loadAll();
+    const result = resolveGraphAgainstDisk(graph, ctx.projectRoot);
+    if (isResolved(result)) {
+        // Deliberately not pending even when `loadAll` produced warnings: an
+        // unparseable file is not evidence that the graph is stale, and reporting it
+        // here would give one condition two voices.
+        return { applicable: true, pending: false };
+    }
+    // Named as a hand edit because it is one. There is no `aidlc knowledge remove`,
+    // and `aidlc knowledge update` takes --description/--confidence/--tags/--name
+    // and not --source, so pointing at either would be this very defect — an
+    // instruction to run something that is not there.
+    const parseNote = graph.warnings.length > 0
+        ? ` ${graph.warnings.length} source file(s) could not be read in full, so this is a ` +
+            `partial view: ${graph.warnings.join('; ')}.`
+        : '';
+    return {
+        applicable: true,
+        pending: true,
+        description: `${describeResolution(result)}. ` +
+            'Two remedies, and doctor applies neither: delete the entity document from ' +
+            `${KNOWLEDGE_DIR} if the code is gone, or edit its \`source\` if the code moved. ` +
+            `Paths were resolved against ${ctx.projectRoot}.${parseNote}`,
+    };
+}
+export const knowledgeStaleSources = {
+    id: 'knowledge-stale-sources',
+    tier: 'report',
+    check: staleSourcesCheck,
+};
+//# sourceMappingURL=knowledge-stale-sources.js.map

package/dist/doctor/migrations/knowledge-stale-sources.js.map

@@ -0,0 +1 @@
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package/dist/knowledge/engine.d.ts

@@ -16,8 +16,15 @@ import { KnowledgeWriter } from './writer.js';
 import { KnowledgeReader } from './reader.js';
 import { ContextGenerator } from './context-generator.js';
 import { StalenessDetector } from './staleness.js';
-/** Relative path of the knowledge directory within a project. */
-export declare const KNOWLEDGE_DIR: string;
+import { KNOWLEDGE_DIR } from './types.js';
+/**
+ * Relative path of the knowledge directory within a project.
+ *
+ * Re-exported for the importers that already reach for it here; the declaration
+ * moved to `types.ts` so a reader that must not pull `SqliteIndex` into its
+ * import graph can have the constant without it (stale-graph-entries/AC-17).
+ */
+export { KNOWLEDGE_DIR };
 export interface KnowledgeEngine {
     source: YamlSourceStore;
     index: SqliteIndex;

package/dist/knowledge/engine.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"engine.d.ts","sourceRoot":"","sources":["../../src/knowledge/engine.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAKH,OAAO,EAAE,eAAe,EAAE,MAAM,kBAAkB,CAAC;AACnD,OAAO,EAAE,WAAW,EAAiB,MAAM,yBAAyB,CAAC;AAErE,OAAO,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAC9C,OAAO,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAC9C,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAC;AAC1D,OAAO,EAAE,iBAAiB,EAAE,MAAM,gBAAgB,CAAC;AACnD,OAAO,EAAE,aAAa,EAAE,MAAM,YAAY,CAAC;AAE3C;;;;;;GAMG;AACH,OAAO,EAAE,aAAa,EAAE,CAAC;AAEzB,MAAM,WAAW,eAAe;IAC9B,MAAM,EAAE,eAAe,CAAC;IACxB,KAAK,EAAE,WAAW,CAAC;IACnB,MAAM,EAAE,eAAe,CAAC;IACxB,MAAM,EAAE,eAAe,CAAC;IACxB,OAAO,EAAE,gBAAgB,CAAC;IAC1B,SAAS,EAAE,iBAAiB,CAAC;IAC7B,6DAA6D;IAC7D,QAAQ,EAAE,MAAM,EAAE,CAAC;IACnB,KAAK,IAAI,IAAI,CAAC;CACf;AAED;;;;GAIG;AACH,wBAAgB,aAAa,CAAC,WAAW,EAAE,MAAM,GAAG,eAAe,CAgDlE;AAED,2DAA2D;AAC3D,wBAAgB,eAAe,CAAC,WAAW,EAAE,MAAM,GAAG,OAAO,CAE5D"}

package/dist/knowledge/engine.js

@@ -19,8 +19,15 @@ import { KnowledgeWriter } from './writer.js';
 import { KnowledgeReader } from './reader.js';
 import { ContextGenerator } from './context-generator.js';
 import { StalenessDetector } from './staleness.js';
-/** Relative path of the knowledge directory within a project. */
-export const KNOWLEDGE_DIR = join('.aidlc', 'knowledge');
+import { KNOWLEDGE_DIR } from './types.js';
+/**
+ * Relative path of the knowledge directory within a project.
+ *
+ * Re-exported for the importers that already reach for it here; the declaration
+ * moved to `types.ts` so a reader that must not pull `SqliteIndex` into its
+ * import graph can have the constant without it (stale-graph-entries/AC-17).
+ */
+export { KNOWLEDGE_DIR };
 /**
  * Open the knowledge engine for a project.
  *

package/dist/knowledge/engine.js.map

@@ -1 +1 @@
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+{"version":3,"file":"engine.js","sourceRoot":"","sources":["../../src/knowledge/engine.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AACjC,OAAO,EAAE,UAAU,EAAE,MAAM,EAAE,MAAM,SAAS,CAAC;AAE7C,OAAO,EAAE,eAAe,EAAE,MAAM,kBAAkB,CAAC;AACnD,OAAO,EAAE,WAAW,EAAE,aAAa,EAAE,MAAM,yBAAyB,CAAC;AACrE,OAAO,EAAE,kBAAkB,EAAE,MAAM,4BAA4B,CAAC;AAChE,OAAO,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAC9C,OAAO,EAAE,eAAe,EAAE,MAAM,aAAa,CAAC;AAC9C,OAAO,EAAE,gBAAgB,EAAE,MAAM,wBAAwB,CAAC;AAC1D,OAAO,EAAE,iBAAiB,EAAE,MAAM,gBAAgB,CAAC;AACnD,OAAO,EAAE,aAAa,EAAE,MAAM,YAAY,CAAC;AAE3C;;;;;;GAMG;AACH,OAAO,EAAE,aAAa,EAAE,CAAC;AAczB;;;;GAIG;AACH,MAAM,UAAU,aAAa,CAAC,WAAmB;IAC/C,MAAM,YAAY,GAAG,IAAI,CAAC,WAAW,EAAE,aAAa,CAAC,CAAC;IACtD,MAAM,MAAM,GAAG,IAAI,eAAe,CAAC,YAAY,CAAC,CAAC;IACjD,MAAM,QAAQ,GAAa,EAAE,CAAC;IAE9B,MAAM,MAAM,GAAG,IAAI,CAAC,YAAY,EAAE,aAAa,CAAC,CAAC;IACjD,MAAM,SAAS,GAAG,UAAU,CAAC,MAAM,CAAC,CAAC;IAErC,IAAI,KAAkB,CAAC;IACvB,IAAI,CAAC;QACH,KAAK,GAAG,IAAI,WAAW,CAAC,YAAY,CAAC,CAAC;IACxC,CAAC;IAAC,OAAO,GAAY,EAAE,CAAC;QACtB,IAAI,GAAG,YAAY,kBAAkB,EAAE,CAAC;YACtC,+DAA+D;YAC/D,MAAM,CAAC,MAAM,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC;YAChC,MAAM,CAAC,MAAM,GAAG,MAAM,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC;YACzC,MAAM,CAAC,MAAM,GAAG,MAAM,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC;YACzC,KAAK,GAAG,IAAI,WAAW,CAAC,YAAY,CAAC,CAAC;YACtC,QAAQ,CAAC,IAAI,CAAC,uEAAuE,CAAC,CAAC;QACzF,CAAC;aAAM,CAAC;YACN,MAAM,GAAG,CAAC;QACZ,CAAC;IACH,CAAC;IAED,mEAAmE;IACnE,IAAI,CAAC,CAAC,SAAS,IAAI,KAAK,CAAC,cAAc,EAAE,CAAC,MAAM,KAAK,CAAC,CAAC,IAAI,MAAM,CAAC,MAAM,EAAE,EAAE,CAAC;QAC3E,MAAM,MAAM,GAAG,MAAM,CAAC,OAAO,EAAE,CAAC;QAChC,IAAI,MAAM,CAAC,QAAQ,CAAC,MAAM,GAAG,CAAC,IAAI,MAAM,CAAC,aAAa,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YAClE,KAAK,CAAC,OAAO,CAAC,MAAM,CAAC,QAAQ,EAAE,MAAM,CAAC,aAAa,CAAC,CAAC;QACvD,CAAC;QACD,QAAQ,CAAC,IAAI,CAAC,GAAG,MAAM,CAAC,QAAQ,CAAC,CAAC;IACpC,CAAC;IAED,MAAM,MAAM,GAAG,IAAI,eAAe,CAAC,MAAM,EAAE,KAAK,CAAC,CAAC;IAClD,MAAM,MAAM,GAAG,IAAI,eAAe,CAAC,KAAK,CAAC,CAAC;IAC1C,MAAM,OAAO,GAAG,IAAI,gBAAgB,CAAC,KAAK,CAAC,CAAC;IAC5C,MAAM,SAAS,GAAG,IAAI,iBAAiB,CAAC,KAAK,EAAE,MAAM,EAAE,WAAW,CAAC,CAAC;IAEpE,OAAO;QACL,MAAM;QACN,KAAK;QACL,MAAM;QACN,MAAM;QACN,OAAO;QACP,SAAS;QACT,QAAQ;QACR,KAAK,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,KAAK,EAAE;KAC3B,CAAC;AACJ,CAAC;AAED,2DAA2D;AAC3D,MAAM,UAAU,eAAe,CAAC,WAAmB;IACjD,OAAO,IAAI,eAAe,CAAC,IAAI,CAAC,WAAW,EAAE,aAAa,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;AACxE,CAAC"}

package/dist/knowledge/index/sqlite-index.js

@@ -14,7 +14,7 @@
 import { DatabaseSync } from 'node:sqlite';
 import { join } from 'node:path';
 import { mkdirSync } from 'node:fs';
-import { KNOWLEDGE_SCHEMA_VERSION } from '../types.js';
+import { AGENT_INFERRED_SOURCE, KNOWLEDGE_SCHEMA_VERSION } from '../types.js';
 import { IndexOutdatedError } from './knowledge-index.js';
 /** Filename of the index database inside the knowledge directory. */
 export const INDEX_DB_FILE = 'index.db';
@@ -308,7 +308,7 @@ export class SqliteIndex {
     }
     syncFileMapping(entity) {
         this.db.prepare('DELETE FROM file_mappings WHERE entity_id = ?').run(entity.id);
-        if (entity.source && entity.source !== 'agent-inferred') {
+        if (entity.source && entity.source !== AGENT_INFERRED_SOURCE) {
             this.db
                 .prepare('INSERT OR REPLACE INTO file_mappings (file_path, entity_id) VALUES (?, ?)')
                 .run(entity.source, entity.id);

package/dist/knowledge/index/sqlite-index.js.map

@@ -1 +1 @@
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package/dist/knowledge/seed.js

@@ -15,7 +15,7 @@
  */
 import { readFileSync, readdirSync, existsSync, statSync } from 'node:fs';
 import { join } from 'node:path';
-import { DISCOVERY_CONFIDENCE } from './types.js';
+import { AGENT_INFERRED_SOURCE, DISCOVERY_CONFIDENCE } from './types.js';
 import { detectWorkspacePackages } from '../discover/workspaces.js';
 const AUTO_AUTHOR = 'auto-discovery';
 /** Route definitions recognized in source files (best-effort, design risk 4). */
@@ -144,7 +144,7 @@ export function seedFromScan(projectRoot, scan) {
             name,
             description: value,
             confidence: DISCOVERY_CONFIDENCE,
-            source: 'agent-inferred',
+            source: AGENT_INFERRED_SOURCE,
             author: AUTO_AUTHOR,
             tags: ['auto-discovered', 'style'],
             lastVerified: now,

package/dist/knowledge/seed.js.map

@@ -1 +1 @@
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package/dist/knowledge/source-resolution.d.ts

@@ -0,0 +1,104 @@
+/**
+ * Does the graph still describe code that is there?
+ *
+ * `staleness.ts` has two signals and neither is existence. `byAge` flags anything
+ * not verified in 30 days, which on a real graph is most of it, correct entries
+ * included. `degradeChanged` intersects entity `source` paths with
+ * `git diff --name-only` — so a *deleted* directory goes quiet exactly when its
+ * entries become wrong, because a path that no longer exists stops appearing in
+ * diffs. That is how eight `@rasensio/aidlc-web` module entries and seven `dep-*`
+ * entries survived 17 days past the cutover that deleted `packages/web/`, and why
+ * `aidlc knowledge query "web"` answered with the deleted package first.
+ *
+ * Two classes, one read, because they are one defect at two levels: an entity whose
+ * `source` names nothing, and an edge whose endpoint names no entity. The second
+ * measured 0 across 195 edges before this instance, which makes it the guard on the
+ * fix itself — deleting 15 entities and forgetting their 16 edges would trade one
+ * class for the other.
+ *
+ * Pure over a `LoadedGraph` and one injectable existence predicate: no index, no
+ * subprocess, no network (stale-graph-entries/AC-17). `doctor` calls it, so anything
+ * it reaches is on the default path of a command people run casually.
+ *
+ * Requirements: stale-graph-entries/AC-11, AC-12, AC-14, AC-15
+ *
+ * @module
+ */
+import type { LoadedGraph } from './yaml-source.js';
+/**
+ * What a `source` string is, before anything touches the filesystem.
+ *
+ * `not-repo-relative` exists so that classification, not `existsSync`, is what
+ * decides whether a path is safe to probe. `source` arrives from a tracked YAML
+ * file — tracked is not the same as trusted, and `secure-defaults.md` asks for
+ * `..` rejection at the boundary rather than downstream. An absolute
+ * `/etc/passwd` or a `../../` escape is reported as a defect in the entry and is
+ * never handed to a filesystem call, so a graph file cannot make `aidlc doctor`
+ * probe paths outside the repo it is run in (AC-14).
+ */
+export type SourceKind = {
+    kind: 'sentinel';
+} | {
+    kind: 'empty';
+} | {
+    kind: 'not-repo-relative';
+    reason: 'absolute' | 'escapes-root';
+} | {
+    kind: 'repo-relative';
+    relative: string;
+};
+/**
+ * Classify a `source` without touching the disk.
+ *
+ * Containment is decided on the *resolved* path rather than by looking for `..`
+ * segments: `packages/web/../website` contains `..` and stays inside the root,
+ * while `a/../../b` does not, and only resolution tells them apart.
+ */
+export declare function classifySource(source: string, projectRoot: string): SourceKind;
+/** One entity whose `source` does not describe something on disk. */
+export interface UnresolvedSource {
+    entityId: string;
+    entityName: string;
+    source: string;
+    /**
+     * `missing` — a repo-relative path that resolves nowhere.
+     * `absolute` / `escapes-root` — rejected at classification; never probed.
+     */
+    reason: 'missing' | 'absolute' | 'escapes-root';
+}
+/** One edge whose `from` or `to` names an entity the graph does not hold. */
+export interface DanglingRelationship {
+    from: string;
+    to: string;
+    type: string;
+    /** Which endpoint(s) name nothing — both, when an edge lost both ends. */
+    missing: string[];
+}
+export interface GraphResolution {
+    unresolvedSources: UnresolvedSource[];
+    danglingRelationships: DanglingRelationship[];
+    /** How many entities carried a repo-relative `source` and were therefore probed. */
+    checkedSources: number;
+}
+/**
+ * Resolve every `source` against the disk and every edge endpoint against the
+ * entity set.
+ *
+ * @param graph - Output of `YamlSourceStore.loadAll()`.
+ * @param projectRoot - Working tree the relative paths are resolved against.
+ * @param exists - Injected for tests, which assert that no path outside the
+ *   fixture root ever reaches it (AC-23). Production passes `existsSync`.
+ */
+export declare function resolveGraphAgainstDisk(graph: LoadedGraph, projectRoot: string, exists?: (absolutePath: string) => boolean): GraphResolution;
+/** True when the graph describes nothing that is not there. */
+export declare function isResolved(result: GraphResolution): boolean;
+/**
+ * One-line-per-class summary, longest-lived detail first.
+ *
+ * Capped at `maxItems` per class with an explicit "and N more", because the
+ * failure this reports is plural by nature — the first run against a graph that
+ * has never been checked found 15 — and a doctor line that scrolls is a doctor
+ * line nobody reads.
+ */
+export declare function describeResolution(result: GraphResolution, maxItems?: number): string;
+//# sourceMappingURL=source-resolution.d.ts.map

package/dist/knowledge/source-resolution.d.ts.map

@@ -0,0 +1 @@
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package/dist/knowledge/source-resolution.js

@@ -0,0 +1,141 @@
+/**
+ * Does the graph still describe code that is there?
+ *
+ * `staleness.ts` has two signals and neither is existence. `byAge` flags anything
+ * not verified in 30 days, which on a real graph is most of it, correct entries
+ * included. `degradeChanged` intersects entity `source` paths with
+ * `git diff --name-only` — so a *deleted* directory goes quiet exactly when its
+ * entries become wrong, because a path that no longer exists stops appearing in
+ * diffs. That is how eight `@rasensio/aidlc-web` module entries and seven `dep-*`
+ * entries survived 17 days past the cutover that deleted `packages/web/`, and why
+ * `aidlc knowledge query "web"` answered with the deleted package first.
+ *
+ * Two classes, one read, because they are one defect at two levels: an entity whose
+ * `source` names nothing, and an edge whose endpoint names no entity. The second
+ * measured 0 across 195 edges before this instance, which makes it the guard on the
+ * fix itself — deleting 15 entities and forgetting their 16 edges would trade one
+ * class for the other.
+ *
+ * Pure over a `LoadedGraph` and one injectable existence predicate: no index, no
+ * subprocess, no network (stale-graph-entries/AC-17). `doctor` calls it, so anything
+ * it reaches is on the default path of a command people run casually.
+ *
+ * Requirements: stale-graph-entries/AC-11, AC-12, AC-14, AC-15
+ *
+ * @module
+ */
+import { existsSync } from 'node:fs';
+import { isAbsolute, resolve, sep } from 'node:path';
+import { AGENT_INFERRED_SOURCE } from './types.js';
+/**
+ * Classify a `source` without touching the disk.
+ *
+ * Containment is decided on the *resolved* path rather than by looking for `..`
+ * segments: `packages/web/../website` contains `..` and stays inside the root,
+ * while `a/../../b` does not, and only resolution tells them apart.
+ */
+export function classifySource(source, projectRoot) {
+    const trimmed = source.trim();
+    if (trimmed === '')
+        return { kind: 'empty' };
+    if (trimmed === AGENT_INFERRED_SOURCE)
+        return { kind: 'sentinel' };
+    // Windows drive letters and UNC paths are absolute on win32 only, so `isAbsolute`
+    // is platform-correct where a leading-slash test would not be. A leading slash is
+    // rejected everywhere regardless, since it is absolute on posix and root-relative
+    // on win32 — neither is a repo-relative path.
+    if (isAbsolute(trimmed) || trimmed.startsWith('/') || trimmed.startsWith('\\')) {
+        return { kind: 'not-repo-relative', reason: 'absolute' };
+    }
+    const root = resolve(projectRoot);
+    const target = resolve(root, trimmed);
+    // `startsWith(root + sep)` and not `startsWith(root)`: a sibling directory named
+    // `<root>-backup` starts with the root string and is not inside it.
+    if (target !== root && !target.startsWith(root + sep)) {
+        return { kind: 'not-repo-relative', reason: 'escapes-root' };
+    }
+    return { kind: 'repo-relative', relative: trimmed };
+}
+/**
+ * Resolve every `source` against the disk and every edge endpoint against the
+ * entity set.
+ *
+ * @param graph - Output of `YamlSourceStore.loadAll()`.
+ * @param projectRoot - Working tree the relative paths are resolved against.
+ * @param exists - Injected for tests, which assert that no path outside the
+ *   fixture root ever reaches it (AC-23). Production passes `existsSync`.
+ */
+export function resolveGraphAgainstDisk(graph, projectRoot, exists = existsSync) {
+    const root = resolve(projectRoot);
+    const unresolvedSources = [];
+    let checkedSources = 0;
+    for (const entity of graph.entities) {
+        const classified = classifySource(entity.source ?? '', root);
+        if (classified.kind === 'sentinel' || classified.kind === 'empty')
+            continue;
+        if (classified.kind === 'not-repo-relative') {
+            unresolvedSources.push({
+                entityId: entity.id,
+                entityName: entity.name,
+                source: entity.source,
+                reason: classified.reason,
+            });
+            continue;
+        }
+        checkedSources++;
+        if (!exists(resolve(root, classified.relative))) {
+            unresolvedSources.push({
+                entityId: entity.id,
+                entityName: entity.name,
+                source: entity.source,
+                reason: 'missing',
+            });
+        }
+    }
+    const ids = new Set(graph.entities.map((e) => e.id));
+    const danglingRelationships = [];
+    for (const rel of graph.relationships) {
+        const missing = [rel.from, rel.to].filter((endpoint) => !ids.has(endpoint));
+        if (missing.length > 0) {
+            danglingRelationships.push({ from: rel.from, to: rel.to, type: rel.type, missing });
+        }
+    }
+    return { unresolvedSources, danglingRelationships, checkedSources };
+}
+/** True when the graph describes nothing that is not there. */
+export function isResolved(result) {
+    return result.unresolvedSources.length === 0 && result.danglingRelationships.length === 0;
+}
+/**
+ * One-line-per-class summary, longest-lived detail first.
+ *
+ * Capped at `maxItems` per class with an explicit "and N more", because the
+ * failure this reports is plural by nature — the first run against a graph that
+ * has never been checked found 15 — and a doctor line that scrolls is a doctor
+ * line nobody reads.
+ */
+export function describeResolution(result, maxItems = 8) {
+    const parts = [];
+    if (result.unresolvedSources.length > 0) {
+        const listed = result.unresolvedSources
+            .slice(0, maxItems)
+            .map((u) => `${u.entityId} -> ${u.source}${u.reason === 'missing' ? '' : ` (${u.reason})`}`);
+        const more = result.unresolvedSources.length - listed.length;
+        const one = result.unresolvedSources.length === 1;
+        parts.push(`${result.unresolvedSources.length} ${one ? 'entity names' : 'entities name'} ` +
+            `a source path that does not resolve: ${listed.join(', ')}` +
+            (more > 0 ? `, and ${more} more` : ''));
+    }
+    if (result.danglingRelationships.length > 0) {
+        const listed = result.danglingRelationships
+            .slice(0, maxItems)
+            .map((d) => `${d.from} --${d.type}-> ${d.to} (missing: ${d.missing.join(', ')})`);
+        const more = result.danglingRelationships.length - listed.length;
+        const one = result.danglingRelationships.length === 1;
+        parts.push(`${result.danglingRelationships.length} ${one ? 'relationship names' : 'relationships name'} ` +
+            `an entity the graph does not hold: ${listed.join(', ')}` +
+            (more > 0 ? `, and ${more} more` : ''));
+    }
+    return parts.join('. ');
+}
+//# sourceMappingURL=source-resolution.js.map

package/dist/knowledge/source-resolution.js.map

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package/dist/knowledge/types.d.ts

@@ -26,6 +26,32 @@ export declare const DISCOVERY_CONFIDENCE = 0.6;
 export declare const AGENT_CONFIDENCE = 0.9;
 /** Entities below this confidence are excluded from context output (KG Req 7.5). */
 export declare const STALE_CONFIDENCE_FLOOR = 0.3;
+/**
+ * The `source` value meaning "this fact came from an agent, not from a file".
+ *
+ * The single declaration site for the sentinel (stale-graph-entries/AC-13). It was a
+ * bare literal in three places — the writer's default, the seeder, and the index's
+ * file-mapping predicate — and this instance added a fourth reader that resolves every
+ * *non*-sentinel `source` against the disk. A check whose skip list is its own copy of
+ * the literal is a check that starts reporting all 89 agent-inferred entities the day
+ * one of the copies is respelled.
+ *
+ * One occurrence is deliberately left alone: the `DEFAULT 'agent-inferred'` in the
+ * index's `CREATE TABLE` text. That is schema, not a comparison — interpolating a
+ * constant into DDL buys nothing and makes the schema string depend on a value a
+ * future edit could change without a migration.
+ */
+export declare const AGENT_INFERRED_SOURCE = "agent-inferred";
+/**
+ * Relative path of the knowledge directory within a project.
+ *
+ * Declared here rather than in `engine.ts`, which is where it used to live and
+ * still re-exports it. `engine.ts` imports `SqliteIndex`, so a `doctor` migration
+ * that reached for the constant would have pulled the whole index — and
+ * `node:sqlite`'s experimental warning — onto the default path of
+ * `aidlc doctor` for the sake of one string (stale-graph-entries/AC-17).
+ */
+export declare const KNOWLEDGE_DIR: string;
 /** A node in the knowledge graph (KG Req 1.2, 12.1). */
 export interface Entity {
     /** Unique lowercase slug, e.g. "payment-service". */

package/dist/knowledge/types.d.ts.map

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package/dist/knowledge/types.js

@@ -10,6 +10,7 @@
  *
  * @module
  */
+import { join } from 'node:path';
 // ---------------------------------------------------------------------------
 // Type constants
 // ---------------------------------------------------------------------------
@@ -46,6 +47,32 @@ export const DISCOVERY_CONFIDENCE = 0.6;
 export const AGENT_CONFIDENCE = 0.9;
 /** Entities below this confidence are excluded from context output (KG Req 7.5). */
 export const STALE_CONFIDENCE_FLOOR = 0.3;
+/**
+ * The `source` value meaning "this fact came from an agent, not from a file".
+ *
+ * The single declaration site for the sentinel (stale-graph-entries/AC-13). It was a
+ * bare literal in three places — the writer's default, the seeder, and the index's
+ * file-mapping predicate — and this instance added a fourth reader that resolves every
+ * *non*-sentinel `source` against the disk. A check whose skip list is its own copy of
+ * the literal is a check that starts reporting all 89 agent-inferred entities the day
+ * one of the copies is respelled.
+ *
+ * One occurrence is deliberately left alone: the `DEFAULT 'agent-inferred'` in the
+ * index's `CREATE TABLE` text. That is schema, not a comparison — interpolating a
+ * constant into DDL buys nothing and makes the schema string depend on a value a
+ * future edit could change without a migration.
+ */
+export const AGENT_INFERRED_SOURCE = 'agent-inferred';
+/**
+ * Relative path of the knowledge directory within a project.
+ *
+ * Declared here rather than in `engine.ts`, which is where it used to live and
+ * still re-exports it. `engine.ts` imports `SqliteIndex`, so a `doctor` migration
+ * that reached for the constant would have pulled the whole index — and
+ * `node:sqlite`'s experimental warning — onto the default path of
+ * `aidlc doctor` for the sake of one string (stale-graph-entries/AC-17).
+ */
+export const KNOWLEDGE_DIR = join('.aidlc', 'knowledge');
 // ---------------------------------------------------------------------------
 // Validation helpers
 // ---------------------------------------------------------------------------

package/dist/knowledge/types.js.map

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package/dist/knowledge/writer.d.ts.map

@@ -1 +1 @@
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package/dist/knowledge/writer.js

@@ -11,7 +11,7 @@
  * @module
  */
 import { execSync } from 'node:child_process';
-import { ENTITY_ID_RE, isValidEntityType, isValidRelationshipType, AGENT_CONFIDENCE, } from './types.js';
+import { ENTITY_ID_RE, isValidEntityType, isValidRelationshipType, AGENT_CONFIDENCE, AGENT_INFERRED_SOURCE, } from './types.js';
 /** Patterns that suggest a credential is being written into the graph (NFR N6). */
 const SECRET_PATTERNS = [
     /-----BEGIN [A-Z ]*PRIVATE KEY-----/,
@@ -58,7 +58,7 @@ export class KnowledgeWriter {
             name: input.name,
             description: input.description ?? '',
             confidence: input.confidence ?? AGENT_CONFIDENCE,
-            source: input.source ?? 'agent-inferred',
+            source: input.source ?? AGENT_INFERRED_SOURCE,
             author: input.author ?? resolveAuthor(),
             tags: input.tags ?? [],
             lastVerified: input.lastVerified ?? new Date().toISOString(),

package/dist/knowledge/writer.js.map

@@ -1 +1 @@
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package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@rasensio/aidlc",
-  "version": "1.24.0",
+  "version": "1.25.0",
   "description": "AI Development Lifecycle Framework — structured lifecycle guidance for AI coding agents across platforms",
   "type": "module",
   "main": "dist/cli.js",
@@ -24,7 +24,7 @@
     "commander": "15.0.0",
     "picomatch": "4.0.5",
     "yaml": "2.9.0",
-    "@rasensio/aidlc-content": "1.24.0"
+    "@rasensio/aidlc-content": "1.25.0"
   },
   "devDependencies": {
     "@types/node": "22.15.32",