npm - @quiltdata/benchling-webhook - Versions diffs - 0.9.0-20251126T014959Z → 0.9.0-20251126T040420Z - Mend

@quiltdata/benchling-webhook 0.9.0-20251126T014959Z → 0.9.0-20251126T040420Z

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (18) hide show

package/README.md +1 -1
package/dist/bin/commands/setup-profile.d.ts.map +1 -1
package/dist/bin/commands/setup-profile.js +45 -0
package/dist/bin/commands/setup-profile.js.map +1 -1
package/dist/bin/xdg-launch.d.ts +1 -1
package/dist/bin/xdg-launch.d.ts.map +1 -1
package/dist/bin/xdg-launch.js +103 -24
package/dist/bin/xdg-launch.js.map +1 -1
package/dist/lib/benchling-webhook-stack.d.ts.map +1 -1
package/dist/lib/benchling-webhook-stack.js +38 -4
package/dist/lib/benchling-webhook-stack.js.map +1 -1
package/dist/lib/fargate-service.js +1 -1
package/dist/lib/fargate-service.js.map +1 -1
package/dist/lib/types/config.d.ts +36 -1
package/dist/lib/types/config.d.ts.map +1 -1
package/dist/lib/types/config.js.map +1 -1
package/dist/package.json +1 -1
package/package.json +1 -1

package/README.md CHANGED Viewed

@@ -68,7 +68,7 @@ If the App Canvas is not already part of your standard notebook template, Benchl
 ## Architecture (v0.9.0)
 - **API Gateway HTTP API** terminates TLS and forwards requests through a **VPC Link** to **Cloud Map** service discovery
-- **ECS Fargate** tasks register in `benchling.local` and serve Flask on port **8080** (no ALB hop)
+- **ECS Fargate** tasks register in `benchling.local` and serve FastAPI on port **8080** (no ALB hop)
 - **S3 + SQS** remain the storage and queue backends for package creation
 - **CloudWatch Logs** capture API access logs (`/aws/apigateway/benchling-webhook-http`) and container logs (stack name)

package/dist/bin/commands/setup-profile.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"setup-profile.d.ts","sourceRoot":"","sources":["../../../bin/commands/setup-profile.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AAOH;;;;;;;;;;;;;GAaG;AACH,wBAAsB,mBAAmB,CACrC,WAAW,EAAE,MAAM,EACnB,OAAO,CAAC,EAAE;IACN,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,KAAK,CAAC,EAAE,OAAO,CAAC;CACnB,GACF,OAAO,CAAC,IAAI,CAAC,CAmQf"}

package/dist/bin/commands/setup-profile.js CHANGED Viewed

@@ -114,6 +114,12 @@ async function setupProfileCommand(profileName, options) {
             message: "Use a different Secrets Manager ARN for this profile?",
             default: false,
         },
+        {
+            type: "confirm",
+            name: "customizeVpc",
+            message: "Specify an existing VPC (or auto-create)?",
+            default: false,
+        },
     ]);
     // Optionally prompt for custom Quilt stack ARN
     let quiltStackArn = baseConfig.quilt.stackArn;
@@ -157,6 +163,43 @@ async function setupProfileCommand(profileName, options) {
         ]);
         secretArn = secretAnswer.secretArn;
     }
+    // Optionally prompt for VPC ID
+    let vpcId;
+    if (answers.customizeVpc) {
+        const vpcAnswer = await inquirer_1.default.prompt([
+            {
+                type: "input",
+                name: "vpcId",
+                message: "VPC ID (leave empty to auto-create VPC with private subnets):",
+                default: baseConfig.deployment.vpc?.vpcId || "",
+                validate: (input) => {
+                    if (!input || input.trim().length === 0) {
+                        return true; // Empty is OK - will auto-create VPC
+                    }
+                    if (!/^vpc-[a-f0-9]{8,17}$/.test(input)) {
+                        return "Invalid VPC ID format (expected vpc-xxxxxxxx)";
+                    }
+                    return true;
+                },
+            },
+        ]);
+        vpcId = vpcAnswer.vpcId.trim() || undefined;
+        // If VPC ID was provided, show a warning about requirements
+        if (vpcId) {
+            console.log(chalk_1.default.yellow("\n⚠️  VPC Requirements (v0.9.0):"));
+            console.log(chalk_1.default.dim("  - Must have private subnets in at least 2 availability zones"));
+            console.log(chalk_1.default.dim("  - Private subnets must have NAT Gateway for outbound internet"));
+            console.log(chalk_1.default.dim("  - VPC Link requires proper routing configuration"));
+            console.log(chalk_1.default.dim("  - Deployment will fail if VPC doesn't meet these requirements\n"));
+        }
+        else {
+            console.log(chalk_1.default.green("\n✓ Will auto-create VPC with:"));
+            console.log(chalk_1.default.dim("  - 2 Availability Zones"));
+            console.log(chalk_1.default.dim("  - Public subnets (for NAT Gateways)"));
+            console.log(chalk_1.default.dim("  - Private subnets (for ECS tasks)"));
+            console.log(chalk_1.default.dim("  - 2 NAT Gateways (~$64/month)\n"));
+        }
+    }
     // Create profile config
     const profileConfig = {
         quilt: {
@@ -174,6 +217,7 @@ async function setupProfileCommand(profileName, options) {
         deployment: {
             ...baseConfig.deployment,
             imageTag: answers.imageTag,
+            vpc: vpcId ? { vpcId } : baseConfig.deployment.vpc,
         },
         logging: baseConfig.logging,
         security: baseConfig.security,
@@ -209,6 +253,7 @@ async function setupProfileCommand(profileName, options) {
         console.log(chalk_1.default.dim(`  Image Tag: ${profileConfig.deployment.imageTag}`));
         console.log(chalk_1.default.dim(`  Secret ARN: ${profileConfig.benchling.secretArn}`));
         console.log(chalk_1.default.dim(`  Quilt Stack: ${profileConfig.quilt.stackArn}`));
+        console.log(chalk_1.default.dim(`  VPC: ${profileConfig.deployment.vpc?.vpcId || "auto-create"}`));
         console.log();
     }
     catch (error) {

package/dist/bin/commands/setup-profile.js.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ 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package/dist/bin/xdg-launch.d.ts CHANGED Viewed

@@ -2,7 +2,7 @@
 /**
  * XDG Launch: Unified Configuration Bridge
  *
- * Single command to launch Flask application in different modes (native, docker, docker-dev)
+ * Single command to launch FastAPI application in different modes (native, docker, docker-dev)
  * using profile-based XDG configuration as the single source of truth.
  *
  * Eliminates .env files and manual environment variable management.

package/dist/bin/xdg-launch.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"xdg-launch.d.ts","sourceRoot":"","sources":["../../bin/xdg-launch.ts"],"names":[],"mappings":";AACA;;;;;;;;;;GAUG;AAMH,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AAEpD;;GAEG;AACH,KAAK,UAAU,GAAG,QAAQ,GAAG,QAAQ,GAAG,YAAY,CAAC;AAErD;;GAEG;AACH,UAAU,aAAa;IACnB,IAAI,EAAE,UAAU,CAAC;IACjB,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,OAAO,CAAC;IACjB,IAAI,EAAE,OAAO,CAAC;CACjB;AAED;;GAEG;AACH,KAAK,OAAO,GAAG,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;AAEtC;;;;;GAKG;AACH,iBAAS,cAAc,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,aAAa,CAyCrD;AA2BD;;;;;GAKG;AACH,iBAAS,WAAW,CAAC,WAAW,EAAE,MAAM,GAAG,aAAa,CAmBvD;AAgCD;;;;;;;;;GASG;AACH,iBAAS,YAAY,CAAC,MAAM,EAAE,aAAa,EAAE,IAAI,EAAE,UAAU,EAAE,OAAO,EAAE,aAAa,GAAG,OAAO,~~CAkD9F~~;AAED;;;;;;;GAOG;AACH,iBAAS,cAAc,CAAC,OAAO,EAAE,OAAO,EAAE,OAAO,EAAE,MAAM,GAAG,IAAI,CA2C/D;AAED;;;;;GAKG;AACH,iBAAS,aAAa,CAAC,OAAO,EAAE,OAAO,GAAG,OAAO,CAWhD;~~AAgZD~~,OAAO,EAAE,cAAc,EAAE,WAAW,EAAE,YAAY,EAAE,cAAc,EAAE,aAAa,EAAE,CAAC"}
1	+ {"version":3,"file":"xdg-launch.d.ts","sourceRoot":"","sources":["../../bin/xdg-launch.ts"],"names":[],"mappings":";AACA;;;;;;;;;;GAUG;AAMH,OAAO,EAAE,aAAa,EAAE,MAAM,qBAAqB,CAAC;AAEpD;;GAEG;AACH,KAAK,UAAU,GAAG,QAAQ,GAAG,QAAQ,GAAG,YAAY,CAAC;AAErD;;GAEG;AACH,UAAU,aAAa;IACnB,IAAI,EAAE,UAAU,CAAC;IACjB,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,OAAO,EAAE,OAAO,CAAC;IACjB,IAAI,EAAE,OAAO,CAAC;CACjB;AAED;;GAEG;AACH,KAAK,OAAO,GAAG,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;AAEtC;;;;;GAKG;AACH,iBAAS,cAAc,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,aAAa,CAyCrD;AA2BD;;;;;GAKG;AACH,iBAAS,WAAW,CAAC,WAAW,EAAE,MAAM,GAAG,aAAa,CAmBvD;AAgCD;;;;;;;;;GASG;AACH,iBAAS,YAAY,CAAC,MAAM,EAAE,aAAa,EAAE,IAAI,EAAE,UAAU,EAAE,OAAO,EAAE,aAAa,GAAG,OAAO,CAyD9F;AAED;;;;;;;GAOG;AACH,iBAAS,cAAc,CAAC,OAAO,EAAE,OAAO,EAAE,OAAO,EAAE,MAAM,GAAG,IAAI,CA2C/D;AAED;;;;;GAKG;AACH,iBAAS,aAAa,CAAC,OAAO,EAAE,OAAO,GAAG,OAAO,CAWhD;AA0eD,OAAO,EAAE,cAAc,EAAE,WAAW,EAAE,YAAY,EAAE,cAAc,EAAE,aAAa,EAAE,CAAC"}

package/dist/bin/xdg-launch.js CHANGED Viewed

@@ -3,7 +3,7 @@
 /**
  * XDG Launch: Unified Configuration Bridge
  *
- * Single command to launch Flask application in different modes (native, docker, docker-dev)
+ * Single command to launch FastAPI application in different modes (native, docker, docker-dev)
  * using profile-based XDG configuration as the single source of truth.
  *
  * Eliminates .env files and manual environment variable management.
@@ -153,9 +153,16 @@ function extractSecretName(arn) {
  * @returns Environment variables map
  */
 function buildEnvVars(config, mode, options) {
+    // Filter out undefined values from process.env and convert to Record<string, string>
+    const filteredProcessEnv = {};
+    for (const [key, value] of Object.entries(process.env)) {
+        if (value !== undefined) {
+            filteredProcessEnv[key] = value;
+        }
+    }
     const envVars = {
-        // Preserve existing process.env
-        ...process.env,
+        // Preserve existing process.env (with undefined values filtered out)
+        ...filteredProcessEnv,
         // Quilt Services (v0.8.0+ service-specific - NO MORE STACK ARN!)
         QUILT_WEB_HOST: config.quilt.catalog,
         ATHENA_USER_DATABASE: config.quilt.database,
@@ -176,8 +183,7 @@ function buildEnvVars(config, mode, options) {
     };
     // Mode-specific variables
     if (mode === "native" || mode === "docker-dev") {
-        envVars.FLASK_ENV = "development";
-        envVars.FLASK_DEBUG = "true";
+        envVars.APP_ENV = "development";
         envVars.LOG_LEVEL = config.logging?.level || "DEBUG";
         // Disable verification in dev mode for easier testing
         if (mode === "docker-dev") {
@@ -186,7 +192,7 @@ function buildEnvVars(config, mode, options) {
     }
     else {
         // docker (production)
-        envVars.FLASK_ENV = "production";
+        envVars.APP_ENV = "production";
         envVars.LOG_LEVEL = config.logging?.level || "INFO";
     }
     // Test mode flag
@@ -266,6 +272,18 @@ function filterSecrets(envVars) {
  * @returns Child process
  */
 function spawnDockerCompose(args, dockerDir, envVars, stdio = "inherit") {
+    // Debug: Log key environment variables being passed
+    const keyVars = ["QUILT_WEB_HOST", "ATHENA_USER_DATABASE", "PACKAGER_SQS_URL", "BenchlingSecret"];
+    const debug = process.env.DEBUG_XDG === "true";
+    if (debug) {
+        console.log("DEBUG: Spawning docker-compose with environment:");
+        keyVars.forEach(key => {
+            const value = envVars[key];
+            console.log(`  ${key}=${value ? (key.includes("Secret") ? "***" : value) : "MISSING"}`);
+        });
+        console.log(`DEBUG: cwd=${dockerDir}`);
+        console.log(`DEBUG: command=docker-compose ${args.join(" ")}`);
+    }
     return (0, child_process_1.spawn)("docker-compose", args, {
         cwd: dockerDir,
         env: envVars,
@@ -291,9 +309,19 @@ async function waitForHealth(url, maxAttempts = 30, delayMs = 1000) {
                 console.log(`✅ Server is healthy (attempt ${attempt}/${maxAttempts})\n`);
                 return;
             }
+            else {
+                // Log non-OK responses for debugging
+                if (process.env.DEBUG_XDG === "true") {
+                    console.log(`DEBUG: Health check attempt ${attempt}: HTTP ${response.status}`);
+                }
+            }
         }
-        catch {
-            // Ignore errors and retry
+        catch (error) {
+            // Log errors for debugging
+            if (process.env.DEBUG_XDG === "true" && attempt % 5 === 0) {
+                const err = error;
+                console.log(`DEBUG: Health check attempt ${attempt}: ${err.message}`);
+            }
         }
         if (attempt < maxAttempts) {
             await new Promise(resolve => setTimeout(resolve, delayMs));
@@ -330,9 +358,9 @@ async function runTests(url, profile) {
     });
 }
 /**
- * Launch Flask application in native mode
+ * Launch FastAPI application in native mode
  *
- * Runs Flask directly on host using uv.
+ * Runs FastAPI directly on host using uv.
  *
  * @param envVars - Environment variables
  * @param options - Launch options
@@ -340,7 +368,7 @@ async function runTests(url, profile) {
 async function launchNative(envVars, options) {
     const port = options.port || 8080;
     envVars.PORT = String(port);
-    console.log(`🚀 Launching native Flask (port ${port})...`);
+    console.log(`🚀 Launching native FastAPI (port ${port})...`);
     if (options.verbose) {
         console.log("\nEnvironment Variables:");
         const filtered = filterSecrets(envVars);
@@ -355,8 +383,8 @@ async function launchNative(envVars, options) {
         throw new Error(`Docker directory not found: ${dockerDir}`);
     }
     console.log(`Working directory: ${dockerDir}`);
-    console.log("Command: uv run python -m src.app\n");
-    const proc = (0, child_process_1.spawn)("uv", ["run", "python", "-m", "src.app"], {
+    console.log(`Command: uv run uvicorn src.app:create_app --factory --host 0.0.0.0 --port ${port}\n`);
+    const proc = (0, child_process_1.spawn)("uv", ["run", "uvicorn", "src.app:create_app", "--factory", "--host", "0.0.0.0", "--port", String(port)], {
         cwd: dockerDir,
         env: envVars,
         stdio: options.test ? "pipe" : "inherit",
@@ -388,7 +416,7 @@ async function launchNative(envVars, options) {
         process.on("SIGINT", cleanup);
         process.on("SIGTERM", cleanup);
         proc.on("error", (error) => {
-            console.error(`\n❌ Failed to start native Flask: ${error.message}`);
+            console.error(`\n❌ Failed to start native FastAPI: ${error.message}`);
             if (error.code === "ENOENT") {
                 console.error("\nIs \"uv\" installed and in your PATH?");
                 console.error("Install uv: https://docs.astral.sh/uv/getting-started/installation/");
@@ -397,14 +425,14 @@ async function launchNative(envVars, options) {
         });
         proc.on("exit", (code) => {
             if (code !== 0 && code !== null) {
-                console.error(`\n❌ Native Flask exited with code ${code}`);
+                console.error(`\n❌ Native FastAPI exited with code ${code}`);
             }
             process.exit(code || 0);
         });
     }
 }
 /**
- * Launch Flask application in Docker production mode
+ * Launch FastAPI application in Docker production mode
  *
  * Runs production Docker container via docker-compose.
  *
@@ -428,6 +456,24 @@ async function launchDocker(envVars, options) {
         throw new Error(`Docker directory not found: ${dockerDir}`);
     }
     console.log(`Working directory: ${dockerDir}`);
+    // Build first with --pull to ensure base image is current
+    // This forces Docker to check if source files have changed
+    console.log("Building image with latest source changes...");
+    const buildProc = spawnDockerCompose(["build", "--pull", "app"], dockerDir, envVars, "inherit");
+    // Wait for build to complete
+    await new Promise((resolve, reject) => {
+        buildProc.on("exit", (code) => {
+            if (code === 0) {
+                console.log("\n✅ Build complete, starting container...\n");
+                resolve();
+            }
+            else {
+                reject(new Error(`Build failed with exit code ${code}`));
+            }
+        });
+        buildProc.on("error", reject);
+    });
+    // Now start the container
     console.log("Command: docker-compose up app\n");
     const proc = spawnDockerCompose(["up", "app"], dockerDir, envVars, options.test ? "pipe" : "inherit");
     // If in test mode, run tests after server is healthy
@@ -476,7 +522,7 @@ async function launchDocker(envVars, options) {
     }
 }
 /**
- * Launch Flask application in Docker development mode
+ * Launch FastAPI application in Docker development mode
  *
  * Runs Docker container with hot-reload enabled via docker-compose --profile dev.
  *
@@ -484,9 +530,10 @@ async function launchDocker(envVars, options) {
  * @param options - Launch options
  */
 async function launchDockerDev(envVars, options) {
-    const port = options.port || 8082;
-    envVars.PORT = String(port);
-    console.log(`🐳 Launching Docker development (port ${port}, hot-reload enabled)...`);
+    const hostPort = options.port || 8082;
+    // Note: Container always listens on 8080, hostPort is for the port mapping
+    // Don't set PORT in envVars - let docker-compose.yml handle it
+    console.log(`🐳 Launching Docker development (port ${hostPort}, hot-reload enabled)...`);
     if (options.verbose) {
         console.log("\nEnvironment Variables:");
         const filtered = filterSecrets(envVars);
@@ -500,15 +547,45 @@ async function launchDockerDev(envVars, options) {
         throw new Error(`Docker directory not found: ${dockerDir}`);
     }
     console.log(`Working directory: ${dockerDir}`);
-    console.log("Command: docker-compose --profile dev up app-dev\n");
-    const proc = spawnDockerCompose(["--profile", "dev", "up", "app-dev"], dockerDir, envVars, options.test ? "pipe" : "inherit");
+    // Build first with --pull to ensure base image is current
+    // This forces Docker to check if source files have changed
+    console.log("Building image with latest source changes...");
+    const buildProc = spawnDockerCompose(["--profile", "dev", "build", "--pull", "app-dev"], dockerDir, envVars, "inherit");
+    // Wait for build to complete
+    await new Promise((resolve, reject) => {
+        buildProc.on("exit", (code) => {
+            if (code === 0) {
+                console.log("\n✅ Build complete, starting container...\n");
+                resolve();
+            }
+            else {
+                reject(new Error(`Build failed with exit code ${code}`));
+            }
+        });
+        buildProc.on("error", reject);
+    });
     // If in test mode, run tests after server is healthy
     if (options.test) {
+        // In test mode, use detached mode (-d) to start container in background
+        console.log("Command: docker-compose --profile dev up -d app-dev\n");
+        const startProc = spawnDockerCompose(["--profile", "dev", "up", "-d", "app-dev"], dockerDir, envVars, "inherit");
+        // Wait for docker-compose to start the container
+        await new Promise((resolve, reject) => {
+            startProc.on("exit", (code) => {
+                if (code === 0) {
+                    resolve();
+                }
+                else {
+                    reject(new Error(`docker-compose up failed with exit code ${code}`));
+                }
+            });
+            startProc.on("error", reject);
+        });
         const dockerCleanup = () => {
             spawnDockerCompose(["--profile", "dev", "down"], dockerDir, envVars);
         };
         try {
-            const serverUrl = `http://localhost:${port}`;
+            const serverUrl = `http://localhost:${hostPort}`;
             await waitForHealth(serverUrl);
             const exitCode = await runTests(serverUrl, options.profile);
             console.log("\n🛑 Shutting down Docker dev container...");
@@ -524,7 +601,9 @@ async function launchDockerDev(envVars, options) {
         }
     }
     else {
-        // Non-test mode: run server interactively with graceful shutdown
+        // Non-test mode: run server interactively (foreground)
+        console.log("Command: docker-compose --profile dev up app-dev\n");
+        const proc = spawnDockerCompose(["--profile", "dev", "up", "app-dev"], dockerDir, envVars, "inherit");
         const cleanup = () => {
             console.log("\n\n🛑 Shutting down Docker dev container...");
             spawnDockerCompose(["--profile", "dev", "down"], dockerDir, envVars);

package/dist/bin/xdg-launch.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/lib/benchling-webhook-stack.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"benchling-webhook-stack.d.ts","sourceRoot":"","sources":["../../lib/benchling-webhook-stack.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,GAAG,MAAM,aAAa,CAAC;AAGnC,OAAO,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAGvC,OAAO,EAAE,aAAa,EAAE,MAAM,gBAAgB,CAAC;AAG/C;;;;;GAKG;AACH,MAAM,WAAW,0BAA2B,SAAQ,GAAG,CAAC,UAAU;IAC9D;;;OAGG;IACH,QAAQ,CAAC,MAAM,EAAE,aAAa,CAAC;CAClC;AAED,qBAAa,qBAAsB,SAAQ,GAAG,CAAC,KAAK;IAChD,OAAO,CAAC,QAAQ,CAAC,cAAc,CAAiB;IAChD,OAAO,CAAC,QAAQ,CAAC,GAAG,CAAiB;IACrC,SAAgB,eAAe,EAAE,MAAM,CAAC;gBAGpC,KAAK,EAAE,SAAS,EAChB,EAAE,EAAE,MAAM,EACV,KAAK,EAAE,0BAA0B;~~CAuNxC~~"}
1	+ {"version":3,"file":"benchling-webhook-stack.d.ts","sourceRoot":"","sources":["../../lib/benchling-webhook-stack.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,GAAG,MAAM,aAAa,CAAC;AAGnC,OAAO,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAGvC,OAAO,EAAE,aAAa,EAAE,MAAM,gBAAgB,CAAC;AAG/C;;;;;GAKG;AACH,MAAM,WAAW,0BAA2B,SAAQ,GAAG,CAAC,UAAU;IAC9D;;;OAGG;IACH,QAAQ,CAAC,MAAM,EAAE,aAAa,CAAC;CAClC;AAED,qBAAa,qBAAsB,SAAQ,GAAG,CAAC,KAAK;IAChD,OAAO,CAAC,QAAQ,CAAC,cAAc,CAAiB;IAChD,OAAO,CAAC,QAAQ,CAAC,GAAG,CAAiB;IACrC,SAAgB,eAAe,EAAE,MAAM,CAAC;gBAGpC,KAAK,EAAE,SAAS,EAChB,EAAE,EAAE,MAAM,EACV,KAAK,EAAE,0BAA0B;CAgQxC"}

package/dist/lib/benchling-webhook-stack.js CHANGED Viewed

@@ -140,10 +140,44 @@ class BenchlingWebhookStack extends cdk.Stack {
         const quiltDatabaseValue = quiltDatabaseParam.valueAsString;
         // Bucket name will be resolved at runtime from CloudFormation outputs
         // For CDK purposes, we use a placeholder for IAM permissions
-        // Get the default VPC or create a new one
-        const vpc = ec2.Vpc.fromLookup(this, "DefaultVPC", {
-            isDefault: true,
-        });
+        // VPC Configuration (v0.9.0+)
+        // Architecture mirrors ~/GitHub/deployment/t4/template/network.py (network_version=2.0)
+        // - Option 1: Use existing VPC (if vpcId specified in config)
+        // - Option 2: Create new VPC with private subnets and NAT Gateway (production HA setup)
+        const vpc = config.deployment.vpc?.vpcId
+            ? ec2.Vpc.fromLookup(this, "ExistingVPC", {
+                vpcId: config.deployment.vpc.vpcId,
+            })
+            : new ec2.Vpc(this, "BenchlingWebhookVPC", {
+                maxAzs: 2,
+                natGateways: 2, // Mirror production: 1 NAT Gateway per AZ for high availability
+                subnetConfiguration: [
+                    {
+                        name: "Public",
+                        subnetType: ec2.SubnetType.PUBLIC,
+                        cidrMask: 24,
+                    },
+                    {
+                        name: "Private",
+                        subnetType: ec2.SubnetType.PRIVATE_WITH_EGRESS, // Private + NAT Gateway
+                        cidrMask: 24,
+                    },
+                ],
+            });
+        // Validate VPC has private subnets (required for VPC Link and ECS with assignPublicIp: false)
+        if (vpc.privateSubnets.length === 0) {
+            const vpcIdentifier = config.deployment.vpc?.vpcId || "created";
+            throw new Error(`VPC (${vpcIdentifier}) does not have private subnets. ` +
+                "The v0.9.0 architecture requires private subnets with NAT Gateway for:\n" +
+                "  - VPC Link to connect API Gateway to ECS tasks\n" +
+                "  - ECS Fargate tasks with assignPublicIp: false\n\n" +
+                "If using an existing VPC, ensure it has:\n" +
+                "  - Private subnets in at least 2 availability zones\n" +
+                "  - NAT Gateway(s) for outbound internet access\n" +
+                "  - Proper route tables configured\n\n" +
+                "Or omit vpc.vpcId from config to auto-create a VPC with the correct configuration.");
+        }
+        console.log(`Using VPC: ${config.deployment.vpc?.vpcId || "auto-created"} (${vpc.privateSubnets.length} private subnets)`);
         // HARDCODED: Always use the quiltdata AWS account for ECR images
         const account = "712023778557";
         const region = "us-east-1";

package/dist/lib/benchling-webhook-stack.js.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/lib/fargate-service.js CHANGED Viewed

@@ -264,7 +264,7 @@ class FargateService extends constructs_1.Construct {
             // Security Configuration (verification can be disabled for dev/test)
             ENABLE_WEBHOOK_VERIFICATION: String(config.security?.enableVerification !== false),
             // Application Configuration
-            FLASK_ENV: "production",
+            APP_ENV: "production",
             LOG_LEVEL: props.logLevel || config.logging?.level || "INFO",
         };
         // Add container with configured environment

package/dist/lib/fargate-service.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- 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package/dist/lib/types/config.d.ts CHANGED Viewed

@@ -346,11 +346,46 @@ export interface DeploymentConfig {
      * @default "latest"
      */
     imageTag?: string;
+    /**
+     * VPC configuration for ECS deployment
+     * If not specified, a new VPC will be created with private subnets and NAT Gateway
+     *
+     * @example { vpcId: "vpc-0123456789abcdef0" }
+     */
+    vpc?: VpcConfig;
+}
+/**
+ * VPC Configuration
+ *
+ * Configures VPC for ECS deployment. Supports both existing VPC (by ID) and auto-creation.
+ */
+export interface VpcConfig {
+    /**
+     * Existing VPC ID to use (optional)
+     *
+     * If specified, the VPC must have:
+     * - Private subnets with NAT Gateway for outbound internet access
+     * - Proper routing for ECS tasks
+     *
+     * If not specified, a new VPC will be created matching the Quilt production architecture:
+     * - 2 Availability Zones
+     * - Public subnets (for NAT Gateways)
+     * - Private subnets with NAT Gateway (for ECS tasks)
+     *
+     * @example "vpc-0123456789abcdef0"
+     */
+    vpcId?: string;
+    /**
+     * Whether to create a new VPC if vpcId is not specified
+     *
+     * @default true
+     */
+    createIfMissing?: boolean;
 }
 /**
  * Logging Configuration
  *
- * Python logging level for Flask application.
+ * Python logging level for FastAPI application.
  */
 export interface LoggingConfig {
     /**

package/dist/lib/types/config.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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package/dist/package.json CHANGED Viewed

@@ -1,6 +1,6 @@
 {
     "name": "@quiltdata/benchling-webhook",
-    "version": "0.9.0-20251126T014959Z",
+    "version": "0.9.0-20251126T040420Z",
     "description": "AWS CDK deployment for Benchling webhook processing using Fargate - Deploy directly with npx",
     "main": "dist/lib/index.js",
     "types": "dist/lib/index.d.ts",

package/package.json CHANGED Viewed

@@ -1,6 +1,6 @@
 {
   "name": "@quiltdata/benchling-webhook",
-  "version": "0.9.0-20251126T014959Z",
+  "version": "0.9.0-20251126T040420Z",
   "description": "AWS CDK deployment for Benchling webhook processing using Fargate - Deploy directly with npx",
   "main": "dist/lib/index.js",
   "types": "dist/lib/index.d.ts",