@quiltdata/benchling-webhook 0.7.7-20251114T165315Z → 0.7.8-20251115T063729Z

package/README.md

@@ -32,12 +32,27 @@ npx @quiltdata/benchling-webhook@latest
 
 The wizard will:
 
-1. Detect your Quilt stack from AWS CloudFormation
-2. Collect and validate your Benchling credentials
-3. Sync secrets to AWS Secrets Manager
-4. Deploy to AWS
-
-It will list the outputs, including the webhook URL.
+1. **Catalog Discovery** - Detect and confirm your Quilt catalog DNS
+2. **Stack Query** - Extract configuration from your CloudFormation stack
+3. **Parameter Collection** - Collect Benchling credentials and package settings
+4. **Validation** - Validate all parameters before proceeding
+5. **Deployment Mode** - Choose between integrated or standalone deployment:
+   - **Integrated Mode**: Updates the existing BenchlingSecret in your Quilt stack (recommended if you have one)
+   - **Standalone Mode**: Creates a dedicated secret and optionally deploys a separate webhook stack
+
+#### Deployment Modes
+
+**Integrated Mode** (recommended if your Quilt stack has a BenchlingSecret):
+- Uses the existing BenchlingSecret from your Quilt CloudFormation stack
+- No separate deployment needed - the webhook URL is available from your Quilt stack outputs
+- Cleaner architecture with fewer AWS resources
+
+**Standalone Mode** (for separate deployments):
+- Creates a dedicated secret: `quiltdata/benchling-webhook/<profile>/<tenant>`
+- Prompts you to deploy a separate webhook stack to AWS
+- Useful for testing or isolated deployments
+
+It will list the webhook URL in the completion message or next steps.
 
 NOTE: This version no longer reads your `.env` file.
 Instead, it stores your results in the [XDG_CONFIG_HOME](https://wiki.archlinux.org/title/XDG_Base_Directory),

package/dist/bin/cli.js

@@ -1,5 +1,38 @@
 #!/usr/bin/env node
 "use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
@@ -123,11 +156,22 @@ program
 program
     .command("validate")
     .description("Validate configuration without deploying")
-    .option("--env-file <path>", "Path to .env file", ".env")
+    .option("--profile <name>", "Configuration profile to validate", "default")
     .option("--verbose", "Show detailed validation information")
     .action(async (options) => {
     try {
-        await (0, validate_1.validateCommand)(options);
+        const { XDGConfig } = await Promise.resolve().then(() => __importStar(require("../lib/xdg-config")));
+        const xdg = new XDGConfig();
+        const profile = options.profile || "default";
+        if (!xdg.profileExists(profile)) {
+            console.error(chalk_1.default.red(`Profile does not exist: ${profile}`));
+            console.log();
+            console.log(chalk_1.default.yellow("To create a profile, run:"));
+            console.log(chalk_1.default.cyan("  npx @quiltdata/benchling-webhook"));
+            process.exit(1);
+        }
+        const config = xdg.readProfile(profile);
+        await (0, validate_1.validateCommand)({ config, profile, verbose: options.verbose });
     }
     catch (error) {
         console.error(chalk_1.default.red(error.message));
@@ -153,9 +197,21 @@ program
     .command("manifest")
     .description("Generate Benchling app manifest file")
     .option("--output <path>", "Output file path", "app-manifest.yaml")
+    .option("--profile <name>", "Configuration profile to use (optional)")
+    .option("--catalog <url>", "Catalog URL to use (optional, overrides profile)")
     .action(async (options) => {
     try {
-        await (0, manifest_1.manifestCommand)(options);
+        let catalogUrl = options.catalog;
+        // If catalog not provided directly, try to load from profile
+        if (!catalogUrl && options.profile) {
+            const { XDGConfig } = await Promise.resolve().then(() => __importStar(require("../lib/xdg-config")));
+            const xdg = new XDGConfig();
+            if (xdg.profileExists(options.profile)) {
+                const config = xdg.readProfile(options.profile);
+                catalogUrl = config.quilt.catalog;
+            }
+        }
+        await (0, manifest_1.manifestCommand)({ output: options.output, catalog: catalogUrl });
     }
     catch (error) {
         console.error(chalk_1.default.red(error.message));

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package/dist/bin/commands/deploy.d.ts

@@ -1,3 +1,4 @@
+import { ProfileConfig } from "../../lib/types/config";
 /**
  * Deploy command for v0.7.0 configuration architecture
  *
@@ -19,4 +20,17 @@ export declare function deployCommand(options: {
     region?: string;
     envFile?: string;
 }): Promise<void>;
+/**
+ * Deploy the Benchling webhook stack
+ */
+export declare function deploy(stackArn: string, benchlingSecret: string, config: ProfileConfig, options: {
+    yes?: boolean;
+    bootstrapCheck?: boolean;
+    requireApproval?: string;
+    stage: "dev" | "prod";
+    profileName: string;
+    imageTag: string;
+    region?: string;
+    envFile?: string;
+}): Promise<void>;
 //# sourceMappingURL=deploy.d.ts.map

package/dist/bin/commands/deploy.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"deploy.d.ts","sourceRoot":"","sources":["../../../bin/commands/deploy.ts"],"names":[],"mappings":"AAgDA;;;;;;;;GAQG;AACH,wBAAsB,aAAa,CAAC,OAAO,EAAE;IACzC,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,cAAc,CAAC,EAAE,OAAO,CAAC;IACzB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,KAAK,CAAC,EAAE,KAAK,GAAG,MAAM,CAAC;IACvB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC;CACpB,GAAG,OAAO,CAAC,IAAI,CAAC,CA8FhB"}
+{"version":3,"file":"deploy.d.ts","sourceRoot":"","sources":["../../../bin/commands/deploy.ts"],"names":[],"mappings":"AAYA,OAAO,EAAE,aAAa,EAAE,MAAM,wBAAwB,CAAC;AAoCvD;;;;;;;;GAQG;AACH,wBAAsB,aAAa,CAAC,OAAO,EAAE;IACzC,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,cAAc,CAAC,EAAE,OAAO,CAAC;IACzB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,KAAK,CAAC,EAAE,KAAK,GAAG,MAAM,CAAC;IACvB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC;CACpB,GAAG,OAAO,CAAC,IAAI,CAAC,CA8FhB;AAED;;GAEG;AACH,wBAAsB,MAAM,CACxB,QAAQ,EAAE,MAAM,EAChB,eAAe,EAAE,MAAM,EACvB,MAAM,EAAE,aAAa,EACrB,OAAO,EAAE;IACL,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,cAAc,CAAC,EAAE,OAAO,CAAC;IACzB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,KAAK,EAAE,KAAK,GAAG,MAAM,CAAC;IACtB,WAAW,EAAE,MAAM,CAAC;IACpB,QAAQ,EAAE,MAAM,CAAC;IACjB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC;CACpB,GACF,OAAO,CAAC,IAAI,CAAC,CAgSf"}

package/dist/bin/commands/deploy.js

@@ -37,6 +37,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.deployCommand = deployCommand;
+exports.deploy = deploy;
 const child_process_1 = require("child_process");
 const chalk_1 = __importDefault(require("chalk"));
 const ora_1 = __importDefault(require("ora"));

package/dist/bin/commands/deploy.js.map

@@ -1 +1 @@
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package/dist/bin/commands/infer-quilt-config.d.ts

@@ -19,6 +19,7 @@ interface InferenceResult {
     region?: string;
     account?: string;
     queueUrl?: string;
+    benchlingSecretArn?: string;
     source: string;
 }
 /**
@@ -37,6 +38,8 @@ export declare function inferQuiltConfig(options: {
     region?: string;
     profile?: string;
     interactive?: boolean;
+    yes?: boolean;
+    catalogDns?: string;
 }): Promise<InferenceResult>;
 export {};
 //# sourceMappingURL=infer-quilt-config.d.ts.map

package/dist/bin/commands/infer-quilt-config.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"infer-quilt-config.d.ts","sourceRoot":"","sources":["../../../bin/commands/infer-quilt-config.ts"],"names":[],"mappings":";AACA;;;;;;;;;GASG;AA6BH;;GAEG;AACH,UAAU,eAAe;IACrB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,MAAM,EAAE,MAAM,CAAC;CAClB;AAqJD;;;;;;;;;;;GAWG;AACH,wBAAsB,gBAAgB,CAAC,OAAO,EAAE;IAC5C,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,WAAW,CAAC,EAAE,OAAO,CAAC;CACzB,GAAG,OAAO,CAAC,eAAe,CAAC,CAyH3B"}
+{"version":3,"file":"infer-quilt-config.d.ts","sourceRoot":"","sources":["../../../bin/commands/infer-quilt-config.ts"],"names":[],"mappings":";AACA;;;;;;;;;GASG;AA8BH;;GAEG;AACH,UAAU,eAAe;IACrB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,QAAQ,CAAC,EAAE,MAAM,CAAC;IAClB,kBAAkB,CAAC,EAAE,MAAM,CAAC;IAC5B,MAAM,EAAE,MAAM,CAAC;CAClB;AAwJD;;;;;;;;;;;GAWG;AACH,wBAAsB,gBAAgB,CAAC,OAAO,EAAE;IAC5C,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,WAAW,CAAC,EAAE,OAAO,CAAC;IACtB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,UAAU,CAAC,EAAE,MAAM,CAAC;CACvB,GAAG,OAAO,CAAC,eAAe,CAAC,CAoM3B"}

package/dist/bin/commands/infer-quilt-config.js

@@ -138,6 +138,10 @@ async function findQuiltStacks(region = "us-east-1", profile) {
                             stackInfo.queueUrl = value;
                         }
                     }
+                    else if (key === "BenchlingSecretArn" || key === "BenchlingSecret") {
+                        // Check for BenchlingSecret output from T4 template
+                        stackInfo.benchlingSecretArn = value;
+                    }
                 }
                 stackInfos.push(stackInfo);
             }
@@ -195,22 +199,35 @@ async function promptCatalogSelection(options) {
  * @returns Inferred configuration
  */
 async function inferQuiltConfig(options) {
-    const { region, profile, interactive = true } = options;
+    const { region, profile, interactive = true, yes = false, catalogDns } = options;
     const result = {
         source: "none",
     };
-    // Step 1: Try quilt3 CLI command
-    console.log("Checking quilt3 CLI configuration...");
-    const quilt3Config = getQuilt3Catalog();
-    if (quilt3Config?.catalogUrl) {
-        result.catalog = quilt3Config.catalogUrl;
-        result.source = "quilt3-cli";
+    // Step 1: Use provided catalog or try quilt3 CLI command
+    let quilt3Config = null;
+    if (catalogDns) {
+        // Use the provided catalog DNS - skip quilt3 check
+        console.log(`Using provided catalog: ${catalogDns}`);
+        const catalogUrl = catalogDns.startsWith('http') ? catalogDns : `https://${catalogDns}`;
+        result.catalog = catalogUrl;
+        result.source = "provided";
+        quilt3Config = { catalogUrl }; // Create fake quilt3Config for config.json fetch
     }
     else {
-        console.log("No quilt3 CLI configuration found.");
+        // Try quilt3 CLI command
+        console.log("Checking quilt3 CLI configuration...");
+        quilt3Config = getQuilt3Catalog();
+        if (quilt3Config?.catalogUrl) {
+            result.catalog = quilt3Config.catalogUrl;
+            result.source = "quilt3-cli";
+        }
+        else {
+            console.log("No quilt3 CLI configuration found.");
+        }
     }
     // Step 1.5: If we have a catalog URL but no region specified, fetch config.json to get the region
     let searchRegion = region;
+    let catalogNameFromUrl;
     if (quilt3Config?.catalogUrl && !searchRegion) {
         try {
             console.log(`\nFetching catalog configuration from ${quilt3Config.catalogUrl}...`);
@@ -224,6 +241,10 @@ async function inferQuiltConfig(options) {
             else {
                 console.log("⚠️  config.json does not contain region field");
             }
+            // Extract catalog name from config.json if available
+            if (catalogConfig.stackName) {
+                catalogNameFromUrl = catalogConfig.stackName;
+            }
         }
         catch (error) {
             console.log(`⚠️  Could not fetch config.json: ${error.message}`);
@@ -251,6 +272,26 @@ async function inferQuiltConfig(options) {
         if (matchingStack) {
             selectedStack = matchingStack;
             console.log(`Auto-selected stack matching catalog URL: ${selectedStack.stackName}`);
+            // If --yes not passed, interactive mode, and catalog was NOT explicitly provided, verify the catalog name before using it
+            if (!yes && interactive && !catalogDns) {
+                const rl = readline.createInterface({
+                    input: process.stdin,
+                    output: process.stdout,
+                });
+                const confirmed = await new Promise((resolve) => {
+                    rl.question(`\nUsing catalog stack: ${selectedStack.stackName}\nIs this the correct catalog? (y/n): `, (answer) => {
+                        rl.close();
+                        resolve(answer.trim().toLowerCase() === "y" || answer.trim().toLowerCase() === "yes");
+                    });
+                });
+                if (!confirmed) {
+                    console.log("\nPlease select the correct stack:");
+                    const options = stacks.map((s) => `${s.stackName} (${s.region})`);
+                    const selectedIndex = await promptCatalogSelection(options);
+                    selectedStack = stacks[selectedIndex];
+                    console.log(`\nSelected: ${selectedStack.stackName}`);
+                }
+            }
         }
         else {
             // No match found, prompt user
@@ -270,6 +311,27 @@ async function inferQuiltConfig(options) {
     else if (stacks.length === 1) {
         selectedStack = stacks[0];
         console.log(`Using stack: ${selectedStack.stackName}`);
+        // If --yes not passed, interactive mode, and catalog was NOT explicitly provided, verify the catalog name before using it
+        if (!yes && interactive && !catalogDns) {
+            const rl = readline.createInterface({
+                input: process.stdin,
+                output: process.stdout,
+            });
+            const confirmed = await new Promise((resolve) => {
+                rl.question(`\nUsing catalog stack: ${selectedStack.stackName}\nIs this the correct catalog? (y/n): `, (answer) => {
+                    rl.close();
+                    resolve(answer.trim().toLowerCase() === "y" || answer.trim().toLowerCase() === "yes");
+                });
+            });
+            if (!confirmed) {
+                // User wants to select manually - let the wizard handle it
+                // Return partial result so wizard can prompt for missing fields
+                return {
+                    ...result,
+                    source: "manual-selection-required",
+                };
+            }
+        }
     }
     else if (interactive) {
         const options = stacks.map((s) => `${s.stackName} (${s.region})`);
@@ -300,6 +362,10 @@ async function inferQuiltConfig(options) {
     if (selectedStack.region) {
         result.region = selectedStack.region;
     }
+    if (selectedStack.benchlingSecretArn) {
+        result.benchlingSecretArn = selectedStack.benchlingSecretArn;
+        console.log(`✓ Found BenchlingSecret from Quilt stack: ${selectedStack.benchlingSecretArn}`);
+    }
     if (result.source === "quilt3-cli") {
         result.source = "quilt3-cli+cloudformation";
     }

package/dist/bin/commands/infer-quilt-config.js.map

@@ -1 +1 @@
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package/dist/bin/commands/install.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"install.d.ts","sourceRoot":"","sources":["../../../bin/commands/install.ts"],"names":[],"mappings":";AACA;;;;;;;GAOG;AAQH;;GAEG;AACH,MAAM,WAAW,qBAAqB;IAClC;;;OAGG;IACH,OAAO,CAAC,EAAE,MAAM,CAAC;IAEjB;;OAEG;IACH,WAAW,CAAC,EAAE,MAAM,CAAC;IAErB;;OAEG;IACH,UAAU,CAAC,EAAE,MAAM,CAAC;IAEpB;;OAEG;IACH,SAAS,CAAC,EAAE,MAAM,CAAC;IAEnB;;OAEG;IACH,SAAS,CAAC,EAAE,OAAO,CAAC;IAEpB;;OAEG;IACH,GAAG,CAAC,EAAE,OAAO,CAAC;CAEjB;AAED;;;;;;;;;;;GAWG;AACH,wBAAsB,cAAc,CAAC,OAAO,GAAE,qBAA0B,GAAG,OAAO,CAAC,IAAI,CAAC,CAwIvF"}
+{"version":3,"file":"install.d.ts","sourceRoot":"","sources":["../../../bin/commands/install.ts"],"names":[],"mappings":";AACA;;;;;;;GAOG;AA6BH;;GAEG;AACH,MAAM,WAAW,qBAAqB;IAClC;;;OAGG;IACH,OAAO,CAAC,EAAE,MAAM,CAAC;IAEjB;;OAEG;IACH,WAAW,CAAC,EAAE,MAAM,CAAC;IAErB;;OAEG;IACH,UAAU,CAAC,EAAE,MAAM,CAAC;IAEpB;;OAEG;IACH,SAAS,CAAC,EAAE,MAAM,CAAC;IAEnB;;OAEG;IACH,SAAS,CAAC,EAAE,OAAO,CAAC;IAEpB;;OAEG;IACH,GAAG,CAAC,EAAE,OAAO,CAAC;CAEjB;AAED;;;;;;;;;;;GAWG;AACH,wBAAsB,cAAc,CAAC,OAAO,GAAE,qBAA0B,GAAG,OAAO,CAAC,IAAI,CAAC,CAwJvF"}

package/dist/bin/commands/install.js

@@ -18,6 +18,25 @@ const chalk_1 = __importDefault(require("chalk"));
 const setup_wizard_1 = require("./setup-wizard");
 const deploy_1 = require("./deploy");
 const next_steps_generator_1 = require("../../lib/next-steps-generator");
+/**
+ * Phase titles for the install command
+ * This is the single source of truth for install phase headers
+ */
+const PHASE_TITLES = {
+    setup: "Configuration Setup",
+    deployment: "Deployment",
+};
+/**
+ * Prints a phase header for the install command
+ * Uses distinct visual style from wizard steps (double borders, cyan color)
+ * @param phaseNumber - The phase number
+ * @param title - The phase title
+ */
+function printPhaseHeader(phaseNumber, title) {
+    console.log(chalk_1.default.blue("\n═══════════════════════════════════════════════════════════"));
+    console.log(chalk_1.default.bold.cyan(`  PHASE ${phaseNumber}: ${title}`));
+    console.log(chalk_1.default.blue("═══════════════════════════════════════════════════════════\n"));
+}
 /**
  * Install command - orchestrates setup → deploy workflow
  *
@@ -34,9 +53,8 @@ async function installCommand(options = {}) {
     const { profile = "default", inheritFrom, awsProfile, awsRegion, setupOnly = false, yes = false, } = options;
     // Validate flags
     validateFlags({ setupOnly, yes });
-    // Step 1: Run setup wizard
-    console.log(chalk_1.default.blue("\n═══════════════════════════════════════════════════════════\n"));
-    console.log(chalk_1.default.bold("Step 1: Configuration Setup\n"));
+    // Phase 1: Run setup wizard
+    printPhaseHeader(1, PHASE_TITLES.setup);
     let setupResult;
     try {
         setupResult = await (0, setup_wizard_1.setupWizardCommand)({
@@ -58,6 +76,23 @@ async function installCommand(options = {}) {
         throw new Error("Setup failed. Please check the errors above and try again.");
     }
     console.log(chalk_1.default.green("\n✓ Setup complete!\n"));
+    // Check if integrated stack mode - no deployment needed
+    const isIntegratedMode = setupResult.config.integratedStack === true;
+    if (isIntegratedMode) {
+        // Integrated stack mode - no deployment needed
+        console.log(chalk_1.default.blue("═══════════════════════════════════════════════════════════\n"));
+        console.log(chalk_1.default.bold("Using Integrated Stack Mode"));
+        console.log(chalk_1.default.dim("─".repeat(80)));
+        console.log(chalk_1.default.green("✓ BenchlingSecret updated in Quilt stack"));
+        console.log(chalk_1.default.dim("✓ No separate webhook deployment needed"));
+        console.log(chalk_1.default.dim("✓ Quilt stack will handle webhook events\n"));
+        console.log(chalk_1.default.bold("Next steps:"));
+        console.log("  1. Configure webhook URL in Benchling app settings");
+        console.log(`     (Get the webhook URL from your Quilt stack outputs)`);
+        console.log("  2. Test the webhook integration");
+        console.log(`  3. Monitor logs: npx ts-node scripts/check-logs.ts --profile ${setupResult.profile}\n`);
+        return;
+    }
     // Step 2: Determine if we should deploy
     if (setupOnly) {
         // User explicitly requested setup only
@@ -76,8 +111,7 @@ async function installCommand(options = {}) {
     // Step 3: Prompt for deployment (unless --yes)
     let shouldDeploy = yes;
     if (!yes && !yes) {
-        console.log(chalk_1.default.blue("═══════════════════════════════════════════════════════════\n"));
-        console.log(chalk_1.default.bold("Step 2: Deployment\n"));
+        printPhaseHeader(2, PHASE_TITLES.deployment);
         const answers = await inquirer_1.default.prompt([
             {
                 type: "confirm",
@@ -103,8 +137,7 @@ async function installCommand(options = {}) {
         return;
     }
     // Step 4: Execute deployment
-    console.log(chalk_1.default.blue("\n═══════════════════════════════════════════════════════════\n"));
-    console.log(chalk_1.default.bold("Step 2: Deployment\n"));
+    printPhaseHeader(2, PHASE_TITLES.deployment);
     console.log("Deploying to AWS... This may take 5-10 minutes.\n");
     const stage = determineStage(setupResult.profile);
     try {

package/dist/bin/commands/install.js.map

@@ -1 +1 @@
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package/dist/bin/commands/manifest.d.ts

@@ -1,5 +1,22 @@
-import { type ConfigOptions } from "../../lib/utils/config";
-export declare function manifestCommand(options: ConfigOptions & {
+#!/usr/bin/env node
+/**
+ * Manifest Command
+ *
+ * Pure function to generate Benchling app manifest file.
+ * Catalog URL is passed in as parameter.
+ */
+interface ManifestOptions {
     output?: string;
-}): Promise<void>;
+    catalog?: string;
+}
+/**
+ * Pure function to generate manifest YAML content
+ */
+export declare function generateManifest(catalogUrl?: string): string;
+/**
+ * Manifest command - generates Benchling app manifest file
+ * This is a pure function - catalog URL must be passed in
+ */
+export declare function manifestCommand(options: ManifestOptions): Promise<void>;
+export {};
 //# sourceMappingURL=manifest.d.ts.map

package/dist/bin/commands/manifest.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"manifest.d.ts","sourceRoot":"","sources":["../../../bin/commands/manifest.ts"],"names":[],"mappings":"AAGA,OAAO,EAAkB,KAAK,aAAa,EAAE,MAAM,wBAAwB,CAAC;AAK5E,wBAAsB,eAAe,CAAC,OAAO,EAAE,aAAa,GAAG;IAAE,MAAM,CAAC,EAAE,MAAM,CAAA;CAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CAoDjG"}
+{"version":3,"file":"manifest.d.ts","sourceRoot":"","sources":["../../../bin/commands/manifest.ts"],"names":[],"mappings":";AACA;;;;;GAKG;AASH,UAAU,eAAe;IACrB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC;CACpB;AAED;;GAEG;AACH,wBAAgB,gBAAgB,CAAC,UAAU,CAAC,EAAE,MAAM,GAAG,MAAM,CAyB5D;AAED;;;GAGG;AACH,wBAAsB,eAAe,CAAC,OAAO,EAAE,eAAe,GAAG,OAAO,CAAC,IAAI,CAAC,CA2B7E"}