@quiltdata/benchling-webhook 0.7.4-20251107T053446Z → 0.7.4-20251113T165616Z

package/dist/bin/commands/setup-wizard.js.map

@@ -1 +1 @@
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package/dist/bin/commands/sync-secrets.d.ts

@@ -15,6 +15,7 @@
  *
  * @module scripts/sync-secrets
  */
+import type { XDGBase } from "../../lib/xdg-base";
 import { ProfileName } from "../../lib/types/config";
 /**
  * Secrets sync options
@@ -22,10 +23,10 @@ import { ProfileName } from "../../lib/types/config";
 interface SyncSecretsOptions {
     profile?: ProfileName;
     awsProfile?: string;
-    region?: string;
+    region: string;
     dryRun?: boolean;
     force?: boolean;
-    baseDir?: string;
+    configStorage?: XDGBase;
 }
 /**
  * Sync result
@@ -42,7 +43,7 @@ interface SyncResult {
  * @param options - Sync options
  * @returns Array of sync results
  */
-export declare function syncSecretsToAWS(options?: SyncSecretsOptions): Promise<SyncResult[]>;
+export declare function syncSecretsToAWS(options: SyncSecretsOptions): Promise<SyncResult[]>;
 /**
  * Retrieves secrets from AWS Secrets Manager
  *
@@ -53,6 +54,7 @@ export declare function getSecretsFromAWS(options: {
     profile?: ProfileName;
     awsProfile?: string;
     region?: string;
+    configStorage?: XDGBase;
 }): Promise<Record<string, string>>;
 /**
  * Validates that secrets are accessible
@@ -64,6 +66,7 @@ export declare function validateSecretsAccess(options: {
     profile?: ProfileName;
     awsProfile?: string;
     region?: string;
+    configStorage?: XDGBase;
 }): Promise<boolean>;
 export {};
 //# sourceMappingURL=sync-secrets.d.ts.map

package/dist/bin/commands/sync-secrets.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"sync-secrets.d.ts","sourceRoot":"","sources":["../../../bin/commands/sync-secrets.ts"],"names":[],"mappings":";AACA;;;;;;;;;;;;;;;GAeG;AAYH,OAAO,EAAiB,WAAW,EAAE,MAAM,wBAAwB,CAAC;AAGpE;;GAEG;AACH,UAAU,kBAAkB;IACxB,OAAO,CAAC,EAAE,WAAW,CAAC;IACtB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC;CACpB;AAWD;;GAEG;AACH,UAAU,UAAU;IAChB,UAAU,EAAE,MAAM,CAAC;IACnB,SAAS,EAAE,MAAM,CAAC;IAClB,MAAM,EAAE,SAAS,GAAG,SAAS,GAAG,SAAS,CAAC;IAC1C,OAAO,EAAE,MAAM,CAAC;CACnB;AAgQD;;;;;GAKG;AACH,wBAAsB,gBAAgB,CAAC,OAAO,GAAE,kBAAuB,GAAG,OAAO,CAAC,UAAU,EAAE,CAAC,CA4G9F;AAED;;;;;GAKG;AACH,wBAAsB,iBAAiB,CAAC,OAAO,EAAE;IAC7C,OAAO,CAAC,EAAE,WAAW,CAAC;IACtB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,MAAM,CAAC,EAAE,MAAM,CAAC;CACnB,GAAG,OAAO,CAAC,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC,CAmBlC;AAED;;;;;GAKG;AACH,wBAAsB,qBAAqB,CAAC,OAAO,EAAE;IACjD,OAAO,CAAC,EAAE,WAAW,CAAC;IACtB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,MAAM,CAAC,EAAE,MAAM,CAAC;CACnB,GAAG,OAAO,CAAC,OAAO,CAAC,CAQnB"}
+{"version":3,"file":"sync-secrets.d.ts","sourceRoot":"","sources":["../../../bin/commands/sync-secrets.ts"],"names":[],"mappings":";AACA;;;;;;;;;;;;;;;GAeG;AAWH,OAAO,KAAK,EAAE,OAAO,EAAE,MAAM,oBAAoB,CAAC;AAElD,OAAO,EAAiB,WAAW,EAAE,MAAM,wBAAwB,CAAC;AAGpE;;GAEG;AACH,UAAU,kBAAkB;IACxB,OAAO,CAAC,EAAE,WAAW,CAAC;IACtB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,MAAM,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,aAAa,CAAC,EAAE,OAAO,CAAC;CAC3B;AAWD;;GAEG;AACH,UAAU,UAAU;IAChB,UAAU,EAAE,MAAM,CAAC;IACnB,SAAS,EAAE,MAAM,CAAC;IAClB,MAAM,EAAE,SAAS,GAAG,SAAS,GAAG,SAAS,CAAC;IAC1C,OAAO,EAAE,MAAM,CAAC;CACnB;AAgQD;;;;;GAKG;AACH,wBAAsB,gBAAgB,CAAC,OAAO,EAAE,kBAAkB,GAAG,OAAO,CAAC,UAAU,EAAE,CAAC,CAiHzF;AAED;;;;;GAKG;AACH,wBAAsB,iBAAiB,CAAC,OAAO,EAAE;IAC7C,OAAO,CAAC,EAAE,WAAW,CAAC;IACtB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,aAAa,CAAC,EAAE,OAAO,CAAC;CAC3B,GAAG,OAAO,CAAC,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC,CAmBlC;AAED;;;;;GAKG;AACH,wBAAsB,qBAAqB,CAAC,OAAO,EAAE;IACjD,OAAO,CAAC,EAAE,WAAW,CAAC;IACtB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,aAAa,CAAC,EAAE,OAAO,CAAC;CAC3B,GAAG,OAAO,CAAC,OAAO,CAAC,CAQnB"}

package/dist/bin/commands/sync-secrets.js

@@ -282,12 +282,16 @@ function buildSecretValue(config, clientSecret) {
  * @param options - Sync options
  * @returns Array of sync results
  */
-async function syncSecretsToAWS(options = {}) {
-    const { profile = "default", awsProfile, region = "us-east-1", dryRun = false, force = false, baseDir } = options;
+async function syncSecretsToAWS(options) {
+    const { profile = "default", awsProfile, region, dryRun = false, force = false, configStorage } = options;
+    // Validate required parameters
+    if (!region) {
+        throw new Error("region is required - must specify AWS region for secret storage");
+    }
     const results = [];
     // Step 1: Load configuration
     console.log(`Loading configuration from profile: ${profile}...`);
-    const xdgConfig = new xdg_config_1.XDGConfig(baseDir);
+    const xdgConfig = configStorage || new xdg_config_1.XDGConfig();
     let config;
     try {
         config = xdgConfig.readProfile(profile);
@@ -382,9 +386,9 @@ async function syncSecretsToAWS(options = {}) {
  * @returns Secret value as parsed JSON
  */
 async function getSecretsFromAWS(options) {
-    const { profile = "default", awsProfile, region = "us-east-1" } = options;
+    const { profile = "default", awsProfile, region = "us-east-1", configStorage } = options;
     // Load configuration
-    const xdgConfig = new xdg_config_1.XDGConfig();
+    const xdgConfig = configStorage || new xdg_config_1.XDGConfig();
     const config = xdgConfig.readProfile(profile);
     if (!config.benchling.secretArn) {
         throw new Error("No secret ARN found in configuration. Run sync-secrets first.");
@@ -417,7 +421,7 @@ async function validateSecretsAccess(options) {
  */
 async function main() {
     const args = process.argv.slice(2);
-    const options = {};
+    const options = {}; // Partial until we parse all args
     let command = "sync";
     // Parse command line arguments
     for (let i = 0; i < args.length; i++) {
@@ -461,6 +465,10 @@ async function main() {
             process.exit(0);
         }
     }
+    // Validate required options before execution
+    if (command === "sync" && !options.region) {
+        throw new Error("--region is required for syncing secrets");
+    }
     try {
         if (command === "sync") {
             console.log("╔═══════════════════════════════════════════════════════════╗");

package/dist/bin/commands/sync-secrets.js.map

@@ -1 +1 @@
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package/dist/lib/context-detector.d.ts

@@ -0,0 +1,33 @@
+/**
+ * Execution context detector
+ *
+ * Determines whether CLI is running in repository (with source files)
+ * or via npx (installed package), enabling appropriate command suggestions.
+ *
+ * @module lib/context-detector
+ */
+import { ExecutionContext } from "./types/next-steps";
+/**
+ * Detect execution context
+ *
+ * Determines whether the CLI is running in repository context (with source files)
+ * or via npx (installed package) by examining the file system for:
+ * 1. package.json with matching name
+ * 2. Source TypeScript files in lib/ directory
+ * 3. Available npm scripts
+ *
+ * @returns Execution context information
+ *
+ * @example
+ * ```typescript
+ * const context = detectExecutionContext();
+ * if (context.isRepository) {
+ *   console.log('Running in repository');
+ *   console.log('Available scripts:', context.availableScripts);
+ * } else {
+ *   console.log('Running via npx');
+ * }
+ * ```
+ */
+export declare function detectExecutionContext(): ExecutionContext;
+//# sourceMappingURL=context-detector.d.ts.map

package/dist/lib/context-detector.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"context-detector.d.ts","sourceRoot":"","sources":["../../lib/context-detector.ts"],"names":[],"mappings":"AAAA;;;;;;;GAOG;AAIH,OAAO,EAAE,gBAAgB,EAAE,MAAM,oBAAoB,CAAC;AAqBtD;;;;;;;;;;;;;;;;;;;;;GAqBG;AACH,wBAAgB,sBAAsB,IAAI,gBAAgB,CA6BzD"}

package/dist/lib/context-detector.js

@@ -0,0 +1,224 @@
+"use strict";
+/**
+ * Execution context detector
+ *
+ * Determines whether CLI is running in repository (with source files)
+ * or via npx (installed package), enabling appropriate command suggestions.
+ *
+ * @module lib/context-detector
+ */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.detectExecutionContext = detectExecutionContext;
+const fs = __importStar(require("fs"));
+const path = __importStar(require("path"));
+/**
+ * Package name constant
+ */
+const PACKAGE_NAME = "@quiltdata/benchling-webhook";
+/**
+ * Source directory name
+ */
+const SOURCE_DIR = "lib";
+/**
+ * Detect execution context
+ *
+ * Determines whether the CLI is running in repository context (with source files)
+ * or via npx (installed package) by examining the file system for:
+ * 1. package.json with matching name
+ * 2. Source TypeScript files in lib/ directory
+ * 3. Available npm scripts
+ *
+ * @returns Execution context information
+ *
+ * @example
+ * ```typescript
+ * const context = detectExecutionContext();
+ * if (context.isRepository) {
+ *   console.log('Running in repository');
+ *   console.log('Available scripts:', context.availableScripts);
+ * } else {
+ *   console.log('Running via npx');
+ * }
+ * ```
+ */
+function detectExecutionContext() {
+    try {
+        // Find package.json
+        const pkgPath = findPackageJson();
+        if (!pkgPath) {
+            // No package.json found - assume npx
+            return createNpxContext();
+        }
+        // Read and parse package.json
+        const pkg = readPackageJson(pkgPath);
+        if (!pkg || pkg.name !== PACKAGE_NAME) {
+            // Wrong package or invalid - assume npx
+            return createNpxContext();
+        }
+        // Check for source files
+        const hasSourceFiles = checkForSourceFiles(pkgPath);
+        if (hasSourceFiles) {
+            // Has source files - repository context
+            return createRepositoryContext(pkg);
+        }
+        // No source files - npx context
+        return createNpxContext();
+    }
+    catch {
+        // On any error, default to npx context (safer)
+        return createNpxContext();
+    }
+}
+/**
+ * Find package.json by walking up directory tree
+ *
+ * Starts from current working directory and walks up until package.json
+ * is found or filesystem root is reached.
+ *
+ * @returns Path to package.json or null if not found
+ */
+function findPackageJson() {
+    try {
+        let dir = process.cwd();
+        const root = path.parse(dir).root;
+        while (dir !== root) {
+            const pkgPath = path.join(dir, "package.json");
+            if (fs.existsSync(pkgPath)) {
+                return pkgPath;
+            }
+            dir = path.dirname(dir);
+        }
+        // Check root directory as well
+        const rootPkgPath = path.join(root, "package.json");
+        if (fs.existsSync(rootPkgPath)) {
+            return rootPkgPath;
+        }
+        return null;
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Read and parse package.json
+ *
+ * @param pkgPath - Path to package.json
+ * @returns Parsed package.json or null on error
+ */
+function readPackageJson(pkgPath) {
+    try {
+        const content = fs.readFileSync(pkgPath, "utf-8");
+        const pkg = JSON.parse(content);
+        // Validate it's an object
+        if (typeof pkg !== "object" || pkg === null || Array.isArray(pkg)) {
+            return null;
+        }
+        return pkg;
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Check if source files exist in lib/ directory
+ *
+ * Looks for TypeScript (.ts) files in the lib/ directory relative
+ * to package.json location. Presence of .ts files indicates repository context.
+ *
+ * @param pkgPath - Path to package.json
+ * @returns True if source TypeScript files found
+ */
+function checkForSourceFiles(pkgPath) {
+    try {
+        const pkgDir = path.dirname(pkgPath);
+        const libDir = path.join(pkgDir, SOURCE_DIR);
+        // Check if lib directory exists
+        if (!fs.existsSync(libDir)) {
+            return false;
+        }
+        // Check for TypeScript files
+        const files = fs.readdirSync(libDir);
+        return files.some((f) => f.endsWith(".ts"));
+    }
+    catch {
+        return false;
+    }
+}
+/**
+ * Extract available npm scripts from package.json
+ *
+ * @param pkg - Parsed package.json object
+ * @returns Array of script names
+ */
+function extractAvailableScripts(pkg) {
+    try {
+        if (!pkg || !pkg.scripts || typeof pkg.scripts !== "object") {
+            return [];
+        }
+        return Object.keys(pkg.scripts);
+    }
+    catch {
+        return [];
+    }
+}
+/**
+ * Create repository context object
+ *
+ * @param pkg - Parsed package.json object
+ * @returns Repository execution context
+ */
+function createRepositoryContext(pkg) {
+    return {
+        isRepository: true,
+        isNpx: false,
+        packageName: PACKAGE_NAME,
+        availableScripts: extractAvailableScripts(pkg),
+    };
+}
+/**
+ * Create npx context object
+ *
+ * @returns NPX execution context
+ */
+function createNpxContext() {
+    return {
+        isRepository: false,
+        isNpx: true,
+        packageName: PACKAGE_NAME,
+        availableScripts: [],
+    };
+}
+//# sourceMappingURL=context-detector.js.map

package/dist/lib/context-detector.js.map

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package/dist/lib/interfaces/config-storage.d.ts

@@ -0,0 +1,80 @@
+/**
+ * Configuration Storage Interface
+ *
+ * This interface abstracts the storage mechanism for configuration,
+ * allowing tests to use in-memory implementations instead of the filesystem.
+ */
+import { ProfileConfig, DeploymentHistory, DeploymentRecord, ValidationResult } from "../types/config";
+/**
+ * Interface for configuration storage operations
+ *
+ * This abstraction allows for multiple implementations:
+ * - XDGConfigStorage: Real filesystem-based storage (production)
+ * - MockConfigStorage: In-memory storage (testing)
+ */
+export interface IConfigStorage {
+    /**
+     * Reads configuration for a profile
+     * @param profile - Profile name
+     * @returns Parsed configuration object
+     * @throws {Error} If profile not found or configuration is invalid
+     */
+    readProfile(profile: string): ProfileConfig;
+    /**
+     * Writes configuration for a profile
+     * @param profile - Profile name
+     * @param config - Configuration object to write
+     * @throws {Error} If validation fails or write operation fails
+     */
+    writeProfile(profile: string, config: ProfileConfig): void;
+    /**
+     * Deletes a profile and all its files
+     * @param profile - Profile name to delete
+     * @throws {Error} If attempting to delete default profile or if deletion fails
+     */
+    deleteProfile(profile: string): void;
+    /**
+     * Lists all available profiles
+     * @returns Array of profile names
+     */
+    listProfiles(): string[];
+    /**
+     * Checks if a profile exists
+     * @param profile - Profile name to check
+     * @returns True if profile exists, false otherwise
+     */
+    profileExists(profile: string): boolean;
+    /**
+     * Gets deployment history for a profile
+     * @param profile - Profile name
+     * @returns Deployment history with active deployments and full history
+     */
+    getDeployments(profile: string): DeploymentHistory;
+    /**
+     * Records a new deployment for a profile
+     * @param profile - Profile name
+     * @param deployment - Deployment record to add
+     */
+    recordDeployment(profile: string, deployment: DeploymentRecord): void;
+    /**
+     * Gets the active deployment for a specific stage
+     * @param profile - Profile name
+     * @param stage - Stage name (e.g., "dev", "prod")
+     * @returns Active deployment record for the stage, or null if none exists
+     */
+    getActiveDeployment(profile: string, stage: string): DeploymentRecord | null;
+    /**
+     * Reads profile configuration with inheritance support
+     * @param profile - Profile name to read
+     * @param baseProfile - Optional explicit base profile
+     * @returns Merged configuration with inheritance applied
+     */
+    readProfileWithInheritance(profile: string, baseProfile?: string): ProfileConfig;
+    /**
+     * Validates a profile configuration against the schema
+     * @param config - Configuration object to validate
+     * @returns Validation result with errors and warnings
+     */
+    validateProfile(config: ProfileConfig): ValidationResult;
+}
+//# sourceMappingURL=config-storage.d.ts.map

package/dist/lib/interfaces/config-storage.d.ts.map

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package/dist/lib/interfaces/config-storage.js

@@ -0,0 +1,9 @@
+"use strict";
+/**
+ * Configuration Storage Interface
+ *
+ * This interface abstracts the storage mechanism for configuration,
+ * allowing tests to use in-memory implementations instead of the filesystem.
+ */
+Object.defineProperty(exports, "__esModule", { value: true });
+//# sourceMappingURL=config-storage.js.map

package/dist/lib/interfaces/config-storage.js.map

@@ -0,0 +1 @@
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