@quiltdata/benchling-webhook 0.6.1 → 0.6.3-20251104T170954Z
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +18 -314
- package/dist/bin/benchling-webhook.d.ts.map +1 -1
- package/dist/bin/benchling-webhook.js +1 -1
- package/dist/bin/benchling-webhook.js.map +1 -1
- package/dist/bin/cli.js +1 -1
- package/dist/bin/cli.js.map +1 -1
- package/dist/bin/commands/deploy.d.ts.map +1 -1
- package/dist/bin/commands/deploy.js +167 -58
- package/dist/bin/commands/deploy.js.map +1 -1
- package/dist/bin/commands/setup-wizard.d.ts.map +1 -1
- package/dist/bin/commands/setup-wizard.js +60 -4
- package/dist/bin/commands/setup-wizard.js.map +1 -1
- package/dist/bin/get-env.d.ts +2 -2
- package/dist/bin/get-env.js +8 -8
- package/dist/bin/release.d.ts +3 -3
- package/dist/bin/release.js +7 -7
- package/dist/bin/test-invalid-signature.js +2 -2
- package/dist/bin/version.d.ts +5 -5
- package/dist/bin/version.js +7 -7
- package/dist/lib/xdg-config.d.ts.map +1 -1
- package/dist/lib/xdg-config.js +4 -0
- package/dist/lib/xdg-config.js.map +1 -1
- package/dist/package.json +3 -1
- package/package.json +3 -1
package/README.md
CHANGED
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@@ -4,342 +4,46 @@ Connects Benchling lab notebook entries to Quilt data packages via webhooks.
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## Prerequisites
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- Node.js 18+ with `npx` ([download](https://nodejs.org))
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- [AWS credentials](https://docs.aws.amazon.com/cli/v1/userguide/cli-configure-files.html) configured
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- Existing [Quilt deployment](https://www.quilt.bio/install)
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- Benchling tenant with OAuth app configured
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##
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## Quick Start
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Run the guided setup wizard:
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```bash
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npx @quiltdata/benchling-webhook@latest
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npx @quiltdata/benchling-webhook@latest
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```
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The wizard will:
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1. Detect your Quilt stack from AWS CloudFormation
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2. Collect and validate your Benchling credentials
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3. Sync secrets to AWS Secrets Manager
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4. Deploy to AWS
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```bash
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aws secretsmanager create-secret \
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--name benchling-webhook-credentials \
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--description "Benchling OAuth credentials" \
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--secret-string '{
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"client_id": "your-benchling-client-id",
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"client_secret": "your-benchling-client-secret",
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"tenant": "your-tenant",
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"app_definition_id": "your-app-definition-id"
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}'
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```
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> **Note**: The secret must contain `client_id`, `client_secret`, and `tenant`. The `app_definition_id` is optional but recommended.
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### 3. Deploy to AWS (Secrets-Only Mode - v0.6.0+)
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**Recommended: Secrets-Only Mode** - Minimal configuration, all settings resolved from AWS:
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```bash
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npx @quiltdata/benchling-webhook@latest deploy \
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--quilt-stack-arn "arn:aws:cloudformation:us-east-1:123456789012:stack/QuiltStack/abc123" \
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--benchling-secret "benchling-webhook-credentials"
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```
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That's it! The deployment automatically resolves:
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- Quilt catalog URL from your stack
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- S3 bucket configuration
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- Athena database name
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- SQS queue ARN
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- AWS region and account
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**Alternative: Legacy Mode** - For existing deployments or manual configuration:
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```bash
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npx @quiltdata/benchling-webhook@latest deploy \
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--benchling-secrets @benchling-secrets.json \
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--catalog your-catalog.quiltdata.com
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```
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**See [Secrets Configuration Guide](./docs/SECRETS_CONFIGURATION.md) and [Migration Guide](./docs/MIGRATION_GUIDE_V06.md) for more options**
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### 4. Install in Benchling
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After deployment, you'll receive a webhook URL. Set it in your Benchling app settings and [install the app](https://docs.benchling.com/docs/getting-started-benchling-apps#installing-your-app) in your tenant.
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After deployment, install the webhook URL in your [Benchling app settings](https://docs.benchling.com/docs/getting-started-benchling-apps#installing-your-app).
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## Usage
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In Benchling: Create entry → Insert Canvas → "Quilt Integration" → Create/Update package
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##
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### Deployment Modes (v0.6.0+)
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#### Secrets-Only Mode (Recommended)
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The simplest deployment method - just provide two parameters:
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```bash
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npx @quiltdata/benchling-webhook@latest deploy \
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--quilt-stack-arn "arn:aws:cloudformation:region:account:stack/QuiltStack/id" \
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--benchling-secret "my-secret-name"
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```
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**Benefits**:
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- ✅ Minimal configuration - only 2 parameters needed
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- ✅ Centralized secrets in AWS Secrets Manager
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- ✅ Automatic configuration resolution from CloudFormation
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- ✅ No manual parameter updates when infrastructure changes
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- ✅ Better security - no secrets in CI/CD pipelines
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**How to find your Quilt Stack ARN**:
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```bash
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# List your CloudFormation stacks
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aws cloudformation describe-stacks --query 'Stacks[?contains(StackName, `Quilt`)].StackId'
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# Or from the AWS Console → CloudFormation → Stack Details → Stack info → ARN
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```
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#### Legacy Mode
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For existing deployments or manual configuration:
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```bash
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# Option 1: Inline JSON
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npx @quiltdata/benchling-webhook@latest deploy \
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--benchling-secrets '{"client_id":"xxx","client_secret":"yyy","tenant":"company"}' \
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--catalog your-catalog.quiltdata.com
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# Option 2: JSON File
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npx @quiltdata/benchling-webhook@latest deploy \
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--benchling-secrets @benchling-secrets.json \
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--catalog your-catalog.quiltdata.com
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# Option 3: AWS Secrets Manager ARN
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npx @quiltdata/benchling-webhook@latest deploy \
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--benchling-secrets "arn:aws:secretsmanager:region:account:secret:name" \
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--catalog your-catalog.quiltdata.com
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```
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**📖 [Complete Configuration Guide](./docs/SECRETS_CONFIGURATION.md)**
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**📖 [Migration Guide to v0.6.0](./docs/MIGRATION_GUIDE_V06.md)**
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### Secret Format
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**Required fields**:
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- `client_id`: Benchling OAuth client ID
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- `client_secret`: Benchling OAuth client secret
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- `tenant`: Benchling tenant name (e.g., "company" for company.benchling.com)
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**Optional fields**:
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- `app_definition_id`: Benchling app definition ID
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- `api_url`: Custom Benchling API URL
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**Example**:
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```json
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{
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"client_id": "abc123",
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"client_secret": "secret_key",
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"tenant": "mycompany",
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"app_definition_id": "app_def_123"
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}
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```
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### Updating Secrets
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To update Benchling credentials after deployment:
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**Method 1: Update in AWS Secrets Manager (Recommended)**
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```bash
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aws secretsmanager update-secret \
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--secret-id benchling-webhook/credentials \
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--secret-string '{"client_id":"new_id","client_secret":"new_secret","tenant":"company"}'
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# Restart ECS service to pick up changes
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aws ecs update-service \
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--cluster benchling-webhook-cluster \
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--service benchling-webhook-service \
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--force-new-deployment
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```
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**Method 2: Redeploy Stack**
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```bash
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npx @quiltdata/benchling-webhook@latest deploy \
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--benchling-secrets @updated-secrets.json
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```
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## All Available Commands
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For all available commands, run:
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## Additional Commands
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```bash
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npx @quiltdata/benchling-webhook@latest --help
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npx @quiltdata/benchling-webhook@latest --help # Show all commands
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npx @quiltdata/benchling-webhook@latest deploy # Deploy only
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npx @quiltdata/benchling-webhook@latest test # Test integration
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npx @quiltdata/benchling-webhook@latest manifest # Generate app manifest
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```
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## Resources
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- `validate` - Validate configuration without deploying
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- `test` - Test the deployed webhook endpoint
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- `manifest` - Generate Benchling app manifest file
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### Deploy Options
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```bash
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npx @quiltdata/benchling-webhook@latest deploy [options]
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```
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**Secrets-Only Mode (v0.6.0+ - Recommended)**:
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- `--quilt-stack-arn <arn>` - ARN of Quilt CloudFormation stack
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- `--benchling-secret <name>` - Name or ARN of Benchling secret in Secrets Manager
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**Legacy Mode Configuration**:
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- `--benchling-secrets <value>` - Benchling secrets (ARN, JSON, or @file)
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- `--catalog <url>` - Quilt catalog URL
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- `--bucket <name>` - S3 bucket for data
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**AWS Configuration**:
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- `--profile <name>` - AWS profile to use
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- `--region <region>` - AWS region to deploy to (auto-detected in secrets-only mode)
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- `--image-tag <tag>` - Docker image tag to deploy (default: latest)
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**Deployment Options**:
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- `--env-file <path>` - Path to .env file (default: .env)
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- `--yes` - Skip confirmation prompts
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- `--no-bootstrap-check` - Skip CDK bootstrap verification
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- `--require-approval <level>` - CDK approval level (default: never)
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### Deprecated Parameters (v0.6.0+)
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> ⚠️ **Warning**: The following parameters are deprecated and will be removed in v1.0.0
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- `--tenant` - Use `--benchling-secrets` or secrets-only mode instead
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- `--client-id` - Use `--benchling-secrets` or secrets-only mode instead
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- `--client-secret` - Use `--benchling-secrets` or secrets-only mode instead
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- `--app-id` - Use `--benchling-secrets` or secrets-only mode instead
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**Migration guide**: See [Migration Guide to v0.6.0](./docs/MIGRATION_GUIDE_V06.md)
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## Documentation
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- 📖 [Secrets Configuration Guide](./docs/SECRETS_CONFIGURATION.md) - Comprehensive secrets management documentation
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- 📖 [Architecture Decision Record: Secrets Management](./docs/ADR-001-SECRETS-MANAGEMENT.md) - Design decisions and rationale
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- 📖 [CHANGELOG.md](./CHANGELOG.md) - Version history and release notes
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## Development
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For local development and contributing:
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```bash
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git clone https://github.com/quiltdata/benchling-webhook.git
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cd benchling-webhook
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# Install dependencies and configure (interactive)
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npm run setup
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# Build package
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npm run build
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```
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### Testing Workflow
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```bash
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# 1. Run unit tests (lint + typecheck + mocked tests)
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npm run test
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# 2. Run local integration tests (builds Docker, uses real Benchling payloads)
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npm run test:local
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# 3. Run remote integration tests (deploys dev stack, tests through API Gateway)
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npm run test:remote
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# Individual test commands
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npm run test:ts # TypeScript tests only
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npm run test:python # Python unit tests only
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npm run build:typecheck # Type checking only
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npm run lint # Linting only
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```
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### Release Workflow
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```bash
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# Create and push version tag (triggers release pipeline)
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npm run release:tag
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# CI will run:
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# - npm run test:remote (builds dev image, deploys dev stack, tests)
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# - npm run release (promotes to production after tests pass)
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```
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## Troubleshooting
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### Common Issues
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**Error: "Invalid secret ARN format"**
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- Verify ARN format: `arn:aws:secretsmanager:region:account:secret:name`
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- See [Troubleshooting Guide](./docs/SECRETS_CONFIGURATION.md#troubleshooting)
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**Error: "Missing required field: client_id"**
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- Check secret JSON includes all required fields: `client_id`, `client_secret`, `tenant`
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- Validate JSON syntax: `echo '{"client_id":"..."}' | jq .`
|
|
301
|
-
|
|
302
|
-
**Deprecation Warning**
|
|
303
|
-
|
|
304
|
-
- Migrate to `--benchling-secrets` parameter
|
|
305
|
-
- See [Migration Guide](./docs/SECRETS_CONFIGURATION.md#migration-guide)
|
|
306
|
-
|
|
307
|
-
**For more help**: See [Secrets Configuration - Troubleshooting](./docs/SECRETS_CONFIGURATION.md#troubleshooting)
|
|
308
|
-
|
|
309
|
-
## Security
|
|
310
|
-
|
|
311
|
-
- Secrets are stored in AWS Secrets Manager with encryption at rest
|
|
312
|
-
- Secrets are masked in all CLI output
|
|
313
|
-
- CloudFormation parameters use `noEcho: true`
|
|
314
|
-
- IAM policies grant least-privilege access
|
|
315
|
-
- CloudTrail logs all secret access for audit
|
|
316
|
-
|
|
317
|
-
**Best Practices**:
|
|
318
|
-
|
|
319
|
-
- Never commit secrets to version control
|
|
320
|
-
- Use AWS Secrets Manager for production deployments
|
|
321
|
-
- Rotate secrets regularly
|
|
322
|
-
- Review IAM policies periodically
|
|
323
|
-
|
|
324
|
-
**For detailed security guidance**: See [Secrets Configuration - Security](./docs/SECRETS_CONFIGURATION.md#security-best-practices)
|
|
325
|
-
|
|
326
|
-
## Support
|
|
327
|
-
|
|
328
|
-
- 🐛 [Report Issues](https://github.com/quiltdata/benchling-webhook/issues)
|
|
329
|
-
- 📧 Security vulnerabilities: <security@quiltdata.com>
|
|
330
|
-
- 📖 [Documentation](./docs/)
|
|
331
|
-
- 💬 [Discussions](https://github.com/quiltdata/benchling-webhook/discussions)
|
|
44
|
+
- [Changelog](./CHANGELOG.md) - Version history
|
|
45
|
+
- [Report Issues](https://github.com/quiltdata/benchling-webhook/issues)
|
|
332
46
|
|
|
333
47
|
## License
|
|
334
48
|
|
|
335
49
|
Apache-2.0
|
|
336
|
-
|
|
337
|
-
## Version
|
|
338
|
-
|
|
339
|
-
See [CHANGELOG.md](./CHANGELOG.md) for version history.
|
|
340
|
-
|
|
341
|
-
**Important:** Always use `@latest` with npx to avoid caching issues:
|
|
342
|
-
|
|
343
|
-
```bash
|
|
344
|
-
npx @quiltdata/benchling-webhook@latest --help
|
|
345
|
-
```
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"benchling-webhook.d.ts","sourceRoot":"","sources":["../../bin/benchling-webhook.ts"],"names":[],"mappings":";AACA,OAAO,eAAe,CAAC;AACvB,OAAO,KAAK,GAAG,MAAM,aAAa,CAAC;AACnC,OAAO,EAAE,qBAAqB,EAAE,MAAM,gCAAgC,CAAC;AAEvE,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,qBAAqB,CAAC;AAIlD,QAAA,MAAQ,gBAAgB,
|
|
1
|
+
{"version":3,"file":"benchling-webhook.d.ts","sourceRoot":"","sources":["../../bin/benchling-webhook.ts"],"names":[],"mappings":";AACA,OAAO,eAAe,CAAC;AACvB,OAAO,KAAK,GAAG,MAAM,aAAa,CAAC;AACnC,OAAO,EAAE,qBAAqB,EAAE,MAAM,gCAAgC,CAAC;AAEvE,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,qBAAqB,CAAC;AAIlD,QAAA,MAAQ,gBAAgB,KAAyB,CAAC;AAElD;;GAEG;AACH,MAAM,WAAW,eAAe;IAC9B,YAAY,EAAE,OAAO,CAAC;IACtB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAED;;GAEG;AACH,MAAM,WAAW,gBAAgB;IAC/B,GAAG,EAAE,GAAG,CAAC,GAAG,CAAC;IACb,KAAK,EAAE,qBAAqB,CAAC;IAC7B,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,EAAE,MAAM,CAAC;CACjB;AAED;;GAEG;AACH,MAAM,WAAW,eAAe;IAC9B,OAAO,EAAE,OAAO,CAAC;IACjB,YAAY,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;IACrC,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAED;;;GAGG;AACH,wBAAsB,iBAAiB,CACnC,OAAO,EAAE,MAAM,EACf,MAAM,EAAE,MAAM,GACf,OAAO,CAAC,eAAe,CAAC,CAsC1B;AAED;;;GAGG;AACH,wBAAsB,kBAAkB,CAAC,UAAU,EAAE,MAAM,GAAG,OAAO,CAAC,eAAe,CAAC,CAoBrF;AAED;;;GAGG;AACH,wBAAgB,WAAW,CAAC,MAAM,EAAE,MAAM,GAAG,gBAAgB,CAuB5D;AAuKD,OAAO,EAAE,gBAAgB,EAAE,CAAC"}
|
|
@@ -44,7 +44,7 @@ const benchling_webhook_stack_1 = require("../lib/benchling-webhook-stack");
|
|
|
44
44
|
const child_process_1 = require("child_process");
|
|
45
45
|
// Import get-env for library usage
|
|
46
46
|
// eslint-disable-next-line @typescript-eslint/no-require-imports
|
|
47
|
-
const { inferStackConfig } = require("./get-env
|
|
47
|
+
const { inferStackConfig } = require("./get-env");
|
|
48
48
|
exports.inferStackConfig = inferStackConfig;
|
|
49
49
|
/**
|
|
50
50
|
* Check if CDK is bootstrapped for the given account/region
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"benchling-webhook.js","sourceRoot":"","sources":["../../bin/benchling-webhook.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AA6CA,8CAyCC;AAMD,gDAoBC;AAMD,kCAuBC;AA5ID,yBAAuB;AACvB,iDAAmC;AACnC,4EAAuE;AACvE,iDAAyC;AAGzC,mCAAmC;AACnC,iEAAiE;AACjE,MAAM,EAAE,gBAAgB,EAAE,GAAG,OAAO,CAAC,
|
|
1
|
+
{"version":3,"file":"benchling-webhook.js","sourceRoot":"","sources":["../../bin/benchling-webhook.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AA6CA,8CAyCC;AAMD,gDAoBC;AAMD,kCAuBC;AA5ID,yBAAuB;AACvB,iDAAmC;AACnC,4EAAuE;AACvE,iDAAyC;AAGzC,mCAAmC;AACnC,iEAAiE;AACjE,MAAM,EAAE,gBAAgB,EAAE,GAAG,OAAO,CAAC,WAAW,CAAC,CAAC;AA2SzC,4CAAgB;AA3QzB;;;GAGG;AACI,KAAK,UAAU,iBAAiB,CACnC,OAAe,EACf,MAAc;IAEd,IAAI,CAAC;QACD,MAAM,MAAM,GAAG,IAAA,wBAAQ,EACnB,+CAA+C,MAAM,6EAA6E,EAClI,EAAE,QAAQ,EAAE,OAAO,EAAE,CACxB,CAAC;QAEF,MAAM,WAAW,GAAG,MAAM,CAAC,IAAI,EAAE,CAAC;QAElC,IACI,WAAW,CAAC,QAAQ,CAAC,gBAAgB,CAAC;YAC5C,WAAW,CAAC,QAAQ,CAAC,iBAAiB,CAAC,EACnC,CAAC;YACC,OAAO;gBACH,YAAY,EAAE,KAAK;gBACnB,OAAO,EAAE,uCAAuC,OAAO,cAAc,MAAM,EAAE;gBAC7E,OAAO,EAAE,2BAA2B,OAAO,IAAI,MAAM,EAAE;aAC1D,CAAC;QACN,CAAC;QAED,IAAI,CAAC,WAAW,CAAC,QAAQ,CAAC,UAAU,CAAC,EAAE,CAAC;YACpC,OAAO;gBACH,YAAY,EAAE,IAAI;gBAClB,MAAM,EAAE,WAAW;gBACnB,OAAO,EAAE,iCAAiC,WAAW,qCAAqC;aAC7F,CAAC;QACN,CAAC;QAED,OAAO;YACH,YAAY,EAAE,IAAI;YAClB,MAAM,EAAE,WAAW;SACtB,CAAC;IACN,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACb,OAAO;YACH,YAAY,EAAE,KAAK;YACnB,OAAO,EAAE,0CAA2C,KAAe,CAAC,OAAO,EAAE;SAChF,CAAC;IACN,CAAC;AACL,CAAC;AAED;;;GAGG;AACI,KAAK,UAAU,kBAAkB,CAAC,UAAkB;IACvD,IAAI,CAAC;QACL,gBAAgB;QACZ,MAAM,aAAa,GAAG,UAAU,CAAC,UAAU,CAAC,MAAM,CAAC;YAC/C,CAAC,CAAC,UAAU;YACZ,CAAC,CAAC,WAAW,UAAU,EAAE,CAAC;QAE9B,MAAM,MAAM,GAAG,MAAM,gBAAgB,CAAC,aAAa,CAAC,CAAC;QAErD,OAAO;YACH,OAAO,EAAE,IAAI;YACb,YAAY,EAAE,MAAM,CAAC,YAAY;SACpC,CAAC;IACN,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACb,OAAO;YACH,OAAO,EAAE,KAAK;YACd,YAAY,EAAE,EAAE;YAChB,KAAK,EAAG,KAAe,CAAC,OAAO;SAClC,CAAC;IACN,CAAC;AACL,CAAC;AAED;;;GAGG;AACH,SAAgB,WAAW,CAAC,MAAc;IACtC,MAAM,GAAG,GAAG,IAAI,GAAG,CAAC,GAAG,EAAE,CAAC;IAE1B,MAAM,KAAK,GAAG,IAAI,+CAAqB,CAAC,GAAG,EAAE,uBAAuB,EAAE;QAClE,GAAG,EAAE;YACD,OAAO,EAAE,MAAM,CAAC,UAAU;YAC1B,MAAM,EAAE,MAAM,CAAC,SAAS;SAC3B;QACD,yCAAyC;QACzC,aAAa,EAAE,MAAM,CAAC,aAAc;QACpC,eAAe,EAAE,MAAM,CAAC,eAAgB;QACxC,QAAQ,EAAE,MAAM,CAAC,QAAQ,IAAI,MAAM;QACnC,mBAAmB,EAAE,MAAM,CAAC,mBAAmB,KAAK,MAAM;QAC1D,iBAAiB,EAAE,MAAM,CAAC,iBAAiB,IAAI,qBAAqB;QACpE,QAAQ,EAAE,MAAM,CAAC,QAAQ,IAAI,QAAQ;KACxC,CAAC,CAAC;IAEH,OAAO;QACH,GAAG;QACH,KAAK;QACL,SAAS,EAAE,KAAK,CAAC,SAAS;QAC1B,OAAO,EAAE,KAAK,CAAC,OAAO;KACzB,CAAC;AACN,CAAC;AAED;;;;GAIG;AACH,KAAK,UAAU,eAAe;IAC1B,MAAM,OAAO,GAAG,OAAO,CAAC,GAAG,CAAC;IAC5B,IAAI,WAAW,GAA2B,EAAE,CAAC;IAE7C,sEAAsE;IACtE,IAAI,OAAO,CAAC,aAAa,EAAE,CAAC;QACxB,IAAI,CAAC;YACD,OAAO,CAAC,GAAG,CAAC,yCAAyC,OAAO,CAAC,aAAa,EAAE,CAAC,CAAC;YAC9E,MAAM,MAAM,GAAG,MAAM,gBAAgB,CACjC,WAAW,OAAO,CAAC,aAAa,CAAC,OAAO,CAAC,cAAc,EAAE,EAAE,CAAC,EAAE,CACjE,CAAC;YACF,WAAW,GAAG,MAAM,CAAC,YAAY,CAAC;YAClC,OAAO,CAAC,GAAG,CAAC,+CAA+C,CAAC,CAAC;QACjE,CAAC;QAAC,OAAO,KAAK,EAAE,CAAC;YACb,OAAO,CAAC,KAAK,CACT,wDAAyD,KAAe,CAAC,OAAO,EAAE,CACrF,CAAC;YACF,OAAO,CAAC,KAAK,CAAC,+CAA+C,CAAC,CAAC;QACnE,CAAC;IACL,CAAC;IAED,wDAAwD;IACxD,MAAM,MAAM,GAAG,EAAE,GAAG,WAAW,EAAE,GAAG,OAAO,EAAE,CAAC;IAE9C,yCAAyC;IACzC,MAAM,gBAAgB,GAAG;QACrB,eAAe;QACf,mBAAmB;QACnB,qBAAqB;QACrB,yBAAyB;QACzB,kBAAkB;KACrB,CAAC;IAEF,MAAM,WAAW,GAAG,gBAAgB,CAAC,MAAM,CAAC,CAAC,OAAO,EAAE,EAAE,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,CAAC;IAE3E,IAAI,WAAW,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QACzB,OAAO,CAAC,KAAK,CAAC,gDAAgD,CAAC,CAAC;QAChE,WAAW,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,EAAE;YAC5B,OAAO,CAAC,KAAK,CAAC,OAAO,OAAO,EAAE,CAAC,CAAC;QACpC,CAAC,CAAC,CAAC;QACH,OAAO,CAAC,KAAK,CAAC,iDAAiD,CAAC,CAAC;QACjE,OAAO,CAAC,KAAK,CAAC,gCAAgC,CAAC,CAAC;QAChD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC;IAED,uCAAuC;IACvC,MAAM,oBAAoB,GAAG;QACzB,qBAAqB;QACrB,oBAAoB;QACpB,WAAW;QACX,gBAAgB;KACnB,CAAC;IAEF,MAAM,mBAAmB,GAAG,oBAAoB,CAAC,MAAM,CACnD,CAAC,OAAO,EAAE,EAAE,CAAC,CAAC,MAAM,CAAC,OAAO,CAAC,CAChC,CAAC;IAEF,IAAI,mBAAmB,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QACjC,OAAO,CAAC,KAAK,CAAC,gDAAgD,CAAC,CAAC;QAChE,mBAAmB,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,EAAE;YACpC,OAAO,CAAC,KAAK,CAAC,OAAO,OAAO,EAAE,CAAC,CAAC;QACpC,CAAC,CAAC,CAAC;QACH,OAAO,CAAC,KAAK,CACT,0EAA0E,CAC7E,CAAC;QACF,OAAO,CAAC,KAAK,CAAC,gBAAgB,CAAC,CAAC;QAChC,OAAO,CAAC,KAAK,CAAC,qCAAqC,CAAC,CAAC;QACrD,OAAO,CAAC,KAAK,CAAC,gEAAgE,CAAC,CAAC;QAChF,OAAO,CAAC,KAAK,CAAC,iDAAiD,CAAC,CAAC;QACjE,OAAO,CAAC,KAAK,CAAC,uEAAuE,CAAC,CAAC;QACvF,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC;IAED,qCAAqC;IACrC,MAAM,uBAAuB,GAAG;QAC5B,kBAAkB;QAClB,qBAAqB;QACrB,yBAAyB;QACzB,6BAA6B;KACvB,CAAC;IAEX,MAAM,gBAAgB,GAAG,uBAAuB,CAAC,MAAM,CACnD,CAAC,KAAK,EAAE,EAAE,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,CAC5B,CAAC;IAEF,IAAI,gBAAgB,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QAC9B,OAAO,CAAC,KAAK,CACT,mEAAmE,CACtE,CAAC;QACF,gBAAgB,CAAC,OAAO,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,OAAO,CAAC,KAAK,CAAC,OAAO,KAAK,EAAE,CAAC,CAAC,CAAC;QACnE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC;IAED,OAAO,MAAM,CAAC;AAClB,CAAC;AAED;;;GAGG;AACH,KAAK,UAAU,UAAU;IACrB,MAAM,MAAM,GAAG,MAAM,eAAe,EAAE,CAAC;IAEvC,kBAAkB;IAClB,MAAM,eAAe,GAAG,MAAM,iBAAiB,CAC/C,MAAM,CAAC,mBAAoB,EAC3B,MAAM,CAAC,kBAAmB,CACzB,CAAC;IAEF,IAAI,CAAC,eAAe,CAAC,YAAY,EAAE,CAAC;QAChC,OAAO,CAAC,KAAK,CAAC,yBAAyB,CAAC,CAAC;QACzC,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC;QAC9B,OAAO,CAAC,KAAK,CAAC,eAAe,CAAC,OAAO,CAAC,CAAC;QACvC,OAAO,CAAC,KAAK,CAAC,0BAA0B,CAAC,CAAC;QAC1C,OAAO,CAAC,KAAK,CAAC,KAAK,eAAe,CAAC,OAAO,EAAE,CAAC,CAAC;QAC9C,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC;QAC9B,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC;IAED,IAAI,eAAe,CAAC,OAAO,EAAE,CAAC;QAC1B,OAAO,CAAC,KAAK,CAAC,6BAA6B,CAAC,CAAC;QAC7C,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC;QAC9B,OAAO,CAAC,KAAK,CAAC,eAAe,CAAC,OAAO,CAAC,CAAC;QACvC,OAAO,CAAC,KAAK,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CAAC,CAAC;IAClC,CAAC;SAAM,CAAC;QACJ,OAAO,CAAC,GAAG,CAAC,4CAA4C,eAAe,CAAC,MAAM,KAAK,CAAC,CAAC;IACzF,CAAC;IAED,6CAA6C;IAC7C,MAAM,GAAG,GAAG,IAAI,GAAG,CAAC,GAAG,EAAE,CAAC;IAE1B,8DAA8D;IAC9D,2CAA2C;IAC3C,MAAM,aAAa,GAAG,OAAO,CAAC,GAAG,CAAC,eAAe,IAAI,MAAM,CAAC,eAAe,CAAC;IAC5E,MAAM,eAAe,GAAG,OAAO,CAAC,GAAG,CAAC,gBAAgB,IAAI,MAAM,CAAC,gBAAgB,CAAC;IAEhF,IAAI,+CAAqB,CAAC,GAAG,EAAE,uBAAuB,EAAE;QACpD,GAAG,EAAE;YACD,OAAO,EAAE,MAAM,CAAC,mBAAmB;YACnC,MAAM,EAAE,MAAM,CAAC,kBAAkB;SACpC;QACD,yCAAyC;QACzC,aAAa,EAAE,aAAc;QAC7B,eAAe,EAAE,eAAgB;QACjC,QAAQ,EAAE,MAAM,CAAC,SAAS,IAAI,MAAM;QACpC,+BAA+B;QAC/B,mBAAmB,EAAE,MAAM,CAAC,qBAAqB,KAAK,MAAM;QAC5D,iBAAiB,EAAE,MAAM,CAAC,mBAAmB,IAAI,qBAAqB;KACzE,CAAC,CAAC;AACP,CAAC;AAED,6CAA6C;AAC7C,IAAI,OAAO,CAAC,IAAI,KAAK,MAAM,EAAE,CAAC;IAC1B,UAAU,EAAE,CAAC,KAAK,CAAC,CAAC,KAAK,EAAE,EAAE;QACzB,OAAO,CAAC,KAAK,CAAC,mCAAmC,EAAE,KAAK,CAAC,CAAC;QAC1D,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC,CAAC,CAAC;AACP,CAAC"}
|
package/dist/bin/cli.js
CHANGED
|
@@ -26,7 +26,7 @@ program
|
|
|
26
26
|
.command("deploy", { isDefault: true })
|
|
27
27
|
.description("Deploy the CDK stack to AWS")
|
|
28
28
|
.option("--quilt-stack-arn <arn>", "ARN of Quilt CloudFormation stack")
|
|
29
|
-
.option("--benchling-secret <name>", "Name or ARN of Benchling secret in Secrets Manager
|
|
29
|
+
.option("--benchling-secret <name>", "Name or ARN of Benchling secret in Secrets Manager")
|
|
30
30
|
.option("--env-file <path>", "Path to .env file", ".env")
|
|
31
31
|
// Common options
|
|
32
32
|
.option("--no-bootstrap-check", "Skip CDK bootstrap verification")
|
package/dist/bin/cli.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"cli.js","sourceRoot":"","sources":["../../bin/cli.ts"],"names":[],"mappings":";;;;;;AACA,yCAAoC;AACpC,kDAA0B;AAC1B,8CAAkD;AAClD,0CAA8C;AAC9C,kDAAsD;AACtD,0CAA8C;AAC9C,kDAAsD;AACtD,0DAA6D;AAE7D,gCAAgC;AAChC,iEAAiE;AACjE,MAAM,GAAG,GAAG,OAAO,CAAC,iBAAiB,CAAC,CAAC;AAEvC,MAAM,OAAO,GAAG,IAAI,mBAAO,EAAE,CAAC;AAE9B,OAAO;KACF,IAAI,CAAC,mBAAmB,CAAC;KACzB,WAAW,CAAC,kFAAkF,CAAC;KAC/F,OAAO,CAAC,GAAG,CAAC,OAAO,EAAE,eAAe,EAAE,wBAAwB,CAAC;KAC/D,UAAU,CAAC,YAAY,EAAE,0BAA0B,CAAC,CAAC;AAE1D,2BAA2B;AAC3B,OAAO;KACF,OAAO,CAAC,QAAQ,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC;KACtC,WAAW,CAAC,6BAA6B,CAAC;KAC1C,MAAM,CAAC,yBAAyB,EAAE,mCAAmC,CAAC;KACtE,MAAM,CAAC,2BAA2B,EAAE
|
|
1
|
+
{"version":3,"file":"cli.js","sourceRoot":"","sources":["../../bin/cli.ts"],"names":[],"mappings":";;;;;;AACA,yCAAoC;AACpC,kDAA0B;AAC1B,8CAAkD;AAClD,0CAA8C;AAC9C,kDAAsD;AACtD,0CAA8C;AAC9C,kDAAsD;AACtD,0DAA6D;AAE7D,gCAAgC;AAChC,iEAAiE;AACjE,MAAM,GAAG,GAAG,OAAO,CAAC,iBAAiB,CAAC,CAAC;AAEvC,MAAM,OAAO,GAAG,IAAI,mBAAO,EAAE,CAAC;AAE9B,OAAO;KACF,IAAI,CAAC,mBAAmB,CAAC;KACzB,WAAW,CAAC,kFAAkF,CAAC;KAC/F,OAAO,CAAC,GAAG,CAAC,OAAO,EAAE,eAAe,EAAE,wBAAwB,CAAC;KAC/D,UAAU,CAAC,YAAY,EAAE,0BAA0B,CAAC,CAAC;AAE1D,2BAA2B;AAC3B,OAAO;KACF,OAAO,CAAC,QAAQ,EAAE,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC;KACtC,WAAW,CAAC,6BAA6B,CAAC;KAC1C,MAAM,CAAC,yBAAyB,EAAE,mCAAmC,CAAC;KACtE,MAAM,CAAC,2BAA2B,EAAE,oDAAoD,CAAC;KACzF,MAAM,CAAC,mBAAmB,EAAE,mBAAmB,EAAE,MAAM,CAAC;IACzD,iBAAiB;KAChB,MAAM,CAAC,sBAAsB,EAAE,iCAAiC,CAAC;KACjE,MAAM,CAAC,4BAA4B,EAAE,oBAAoB,EAAE,OAAO,CAAC;KACnE,MAAM,CAAC,kBAAkB,EAAE,oBAAoB,CAAC;KAChD,MAAM,CAAC,mBAAmB,EAAE,yBAAyB,CAAC;KACtD,MAAM,CAAC,mBAAmB,EAAE,8CAA8C,CAAC;KAC3E,MAAM,CAAC,OAAO,EAAE,2BAA2B,CAAC;KAC5C,WAAW,CAAC,OAAO,EAAE;;;;;;;;;;;;CAYzB,CAAC;KACG,MAAM,CAAC,KAAK,EAAE,OAAO,EAAE,EAAE;IACtB,IAAI,CAAC;QACD,MAAM,IAAA,sBAAa,EAAC,OAAO,CAAC,CAAC;IACjC,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACb,OAAO,CAAC,KAAK,CAAC,eAAK,CAAC,GAAG,CAAE,KAAe,CAAC,OAAO,CAAC,CAAC,CAAC;QACnD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC;AACL,CAAC,CAAC,CAAC;AAEP,eAAe;AACf,OAAO;KACF,OAAO,CAAC,MAAM,CAAC;KACf,WAAW,CAAC,wCAAwC,CAAC;KACrD,MAAM,CAAC,iBAAiB,EAAE,kBAAkB,EAAE,MAAM,CAAC;KACrD,MAAM,CAAC,SAAS,EAAE,yBAAyB,CAAC;KAC5C,MAAM,CAAC,WAAW,EAAE,iCAAiC,CAAC;KACtD,MAAM,CAAC,SAAS,EAAE,sCAAsC,CAAC;KACzD,MAAM,CAAC,KAAK,EAAE,OAAO,EAAE,EAAE;IACtB,IAAI,CAAC;QACD,MAAM,IAAA,kBAAW,EAAC,OAAO,CAAC,CAAC;IAC/B,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACb,OAAO,CAAC,KAAK,CAAC,eAAK,CAAC,GAAG,CAAE,KAAe,CAAC,OAAO,CAAC,CAAC,CAAC;QACnD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC;AACL,CAAC,CAAC,CAAC;AAEP,mBAAmB;AACnB,OAAO;KACF,OAAO,CAAC,UAAU,CAAC;KACnB,WAAW,CAAC,0CAA0C,CAAC;KACvD,MAAM,CAAC,mBAAmB,EAAE,mBAAmB,EAAE,MAAM,CAAC;KACxD,MAAM,CAAC,WAAW,EAAE,sCAAsC,CAAC;KAC3D,MAAM,CAAC,KAAK,EAAE,OAAO,EAAE,EAAE;IACtB,IAAI,CAAC;QACD,MAAM,IAAA,0BAAe,EAAC,OAAO,CAAC,CAAC;IACnC,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACb,OAAO,CAAC,KAAK,CAAC,eAAK,CAAC,GAAG,CAAE,KAAe,CAAC,OAAO,CAAC,CAAC,CAAC;QACnD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC;AACL,CAAC,CAAC,CAAC;AAEP,eAAe;AACf,OAAO;KACF,OAAO,CAAC,MAAM,CAAC;KACf,WAAW,CAAC,oCAAoC,CAAC;KACjD,MAAM,CAAC,aAAa,EAAE,2DAA2D,CAAC;KAClF,MAAM,CAAC,KAAK,EAAE,OAAO,EAAE,EAAE;IACtB,IAAI,CAAC;QACD,MAAM,IAAA,kBAAW,EAAC,OAAO,CAAC,CAAC;IAC/B,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACb,OAAO,CAAC,KAAK,CAAC,eAAK,CAAC,GAAG,CAAE,KAAe,CAAC,OAAO,CAAC,CAAC,CAAC;QACnD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC;AACL,CAAC,CAAC,CAAC;AAEP,mBAAmB;AACnB,OAAO;KACF,OAAO,CAAC,UAAU,CAAC;KACnB,WAAW,CAAC,sCAAsC,CAAC;KACnD,MAAM,CAAC,iBAAiB,EAAE,kBAAkB,EAAE,mBAAmB,CAAC;KAClE,MAAM,CAAC,KAAK,EAAE,OAAO,EAAE,EAAE;IACtB,IAAI,CAAC;QACD,MAAM,IAAA,0BAAe,EAAC,OAAO,CAAC,CAAC;IACnC,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACb,OAAO,CAAC,KAAK,CAAC,eAAK,CAAC,GAAG,CAAE,KAAe,CAAC,OAAO,CAAC,CAAC,CAAC;QACnD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC;AACL,CAAC,CAAC,CAAC;AAEP,4CAA4C;AAC5C,IAAI,CAAC,OAAO,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC;IAChC,IAAA,iCAAkB,GAAE;SACf,IAAI,CAAC,GAAG,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;SAC3B,KAAK,CAAC,CAAC,KAAK,EAAE,EAAE;QACb,OAAO,CAAC,KAAK,CAAC,eAAK,CAAC,GAAG,CAAE,KAAe,CAAC,OAAO,CAAC,CAAC,CAAC;QACnD,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IACpB,CAAC,CAAC,CAAC;AACX,CAAC;KAAM,CAAC;IACJ,OAAO,CAAC,KAAK,EAAE,CAAC;AACpB,CAAC"}
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"deploy.d.ts","sourceRoot":"","sources":["../../../bin/commands/deploy.ts"],"names":[],"mappings":"
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1
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+
{"version":3,"file":"deploy.d.ts","sourceRoot":"","sources":["../../../bin/commands/deploy.ts"],"names":[],"mappings":"AA0FA,wBAAsB,aAAa,CAAC,OAAO,EAAE;IAAE,GAAG,CAAC,EAAE,OAAO,CAAC;IAAC,cAAc,CAAC,EAAE,OAAO,CAAC;IAAC,eAAe,CAAC,EAAE,MAAM,CAAC;IAAC,aAAa,CAAC,EAAE,MAAM,CAAC;IAAC,eAAe,CAAC,EAAE,MAAM,CAAC;IAAC,QAAQ,CAAC,EAAE,MAAM,CAAC;IAAC,MAAM,CAAC,EAAE,MAAM,CAAC;IAAC,OAAO,CAAC,EAAE,MAAM,CAAA;CAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CAoFzO"}
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@@ -12,6 +12,56 @@ const enquirer_1 = require("enquirer");
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12
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const config_1 = require("../../lib/utils/config");
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const config_resolver_1 = require("../../lib/utils/config-resolver");
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const benchling_webhook_1 = require("../benchling-webhook");
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const xdg_config_1 = require("../../lib/xdg-config");
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const secrets_1 = require("../../lib/utils/secrets");
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const fs_1 = require("fs");
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const os_1 = require("os");
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const path_1 = require("path");
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const client_cloudformation_1 = require("@aws-sdk/client-cloudformation");
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/**
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* Store deployment configuration in XDG config directory
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* Uses atomic write pattern to prevent corruption
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*/
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function storeDeploymentConfig(environment, config) {
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const configDir = (0, path_1.join)((0, os_1.homedir)(), ".config", "benchling-webhook");
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const deployJsonPath = (0, path_1.join)(configDir, "deploy.json");
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// Read existing deploy.json or create new one
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let deployConfig = {};
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if ((0, fs_1.existsSync)(deployJsonPath)) {
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const content = (0, fs_1.readFileSync)(deployJsonPath, "utf8");
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deployConfig = JSON.parse(content);
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}
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// Update environment section
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deployConfig[environment] = config;
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// Ensure config directory exists
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if (!(0, fs_1.existsSync)(configDir)) {
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(0, fs_1.mkdirSync)(configDir, { recursive: true });
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}
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// Write deploy.json atomically
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const tempPath = `${deployJsonPath}.tmp`;
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(0, fs_1.writeFileSync)(tempPath, JSON.stringify(deployConfig, null, 2));
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// Atomic rename (platform-specific)
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// eslint-disable-next-line @typescript-eslint/no-require-imports
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const fs = require('fs');
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if (process.platform === 'win32') {
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// Windows: create backup before rename
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if ((0, fs_1.existsSync)(deployJsonPath)) {
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const backupPath = `${deployJsonPath}.backup`;
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if ((0, fs_1.existsSync)(backupPath)) {
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fs.unlinkSync(backupPath);
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}
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fs.renameSync(deployJsonPath, backupPath);
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}
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fs.renameSync(tempPath, deployJsonPath);
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}
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else {
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// Unix: atomic rename with overwrite
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fs.renameSync(tempPath, deployJsonPath);
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}
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console.log(`✅ Stored deployment config in ${deployJsonPath}`);
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console.log(` Environment: ${environment}`);
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|
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console.log(` Endpoint: ${config.endpoint}`);
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}
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15
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async function deployCommand(options) {
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console.log((0, boxen_1.default)(chalk_1.default.bold("Benchling Webhook Deployment"), {
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padding: 1,
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@@ -19,26 +69,76 @@ async function deployCommand(options) {
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borderStyle: "round",
|
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20
70
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}));
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console.log();
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//
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const
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// Try to read from XDG config first
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const xdg = new xdg_config_1.XDGConfig();
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let xdgConfig = null;
|
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|
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try {
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|
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if ((0, fs_1.existsSync)(xdg.getPaths().userConfig)) {
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xdgConfig = xdg.readConfig("user");
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console.log(chalk_1.default.dim("✓ Loaded configuration from XDG config\n"));
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+
}
|
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}
|
|
81
|
+
catch (error) {
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console.log(chalk_1.default.yellow(`⚠ Could not load XDG config: ${error.message}`));
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console.log(chalk_1.default.dim(" Falling back to CLI options and environment variables\n"));
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+
}
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// Get required parameters with priority: CLI options > XDG config > environment variables
|
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86
|
+
const quiltStackArn = options.quiltStackArn ||
|
|
87
|
+
xdgConfig?.quiltStackArn ||
|
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88
|
+
process.env.QUILT_STACK_ARN;
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89
|
+
// Generate secret name from XDG config if available
|
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90
|
+
let xdgSecretName;
|
|
91
|
+
if (xdgConfig) {
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|
92
|
+
const profile = xdgConfig.profile || "default";
|
|
93
|
+
const tenant = xdgConfig.benchlingTenant;
|
|
94
|
+
if (tenant) {
|
|
95
|
+
xdgSecretName = (0, secrets_1.generateSecretName)(profile, tenant);
|
|
96
|
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console.log(chalk_1.default.dim(` Generated secret name: ${xdgSecretName}\n`));
|
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97
|
+
}
|
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|
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else {
|
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|
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console.log(chalk_1.default.yellow(" ⚠ XDG config missing benchlingTenant field"));
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console.log(chalk_1.default.dim(" Secret name will use default or CLI option\n"));
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101
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+
}
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|
+
}
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|
+
// Resolve secret name from various sources
|
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104
|
+
const benchlingSecret = options.benchlingSecret ||
|
|
105
|
+
xdgSecretName ||
|
|
106
|
+
xdgConfig?.benchlingSecret ||
|
|
107
|
+
process.env.BENCHLING_SECRET;
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|
108
|
+
// Get image tag from options or XDG config
|
|
109
|
+
const imageTag = options.imageTag ||
|
|
110
|
+
xdgConfig?.imageTag ||
|
|
111
|
+
"latest";
|
|
112
|
+
// Validate required parameters
|
|
113
|
+
const missingParams = [];
|
|
114
|
+
if (!quiltStackArn)
|
|
115
|
+
missingParams.push("--quilt-stack-arn");
|
|
116
|
+
if (!benchlingSecret)
|
|
117
|
+
missingParams.push("--benchling-secret");
|
|
118
|
+
if (missingParams.length > 0) {
|
|
119
|
+
console.error(chalk_1.default.red.bold("❌ Missing Required Parameters\n"));
|
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120
|
+
missingParams.forEach(param => {
|
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121
|
+
console.error(chalk_1.default.red(` ${param} is required`));
|
|
122
|
+
});
|
|
123
|
+
console.log();
|
|
124
|
+
console.log(chalk_1.default.yellow("Options:"));
|
|
125
|
+
console.log(" 1. Provide via CLI:");
|
|
126
|
+
console.log(chalk_1.default.cyan(" npx @quiltdata/benchling-webhook deploy \\"));
|
|
127
|
+
console.log(chalk_1.default.cyan(" --quilt-stack-arn <arn> \\"));
|
|
128
|
+
console.log(chalk_1.default.cyan(" --benchling-secret <name>"));
|
|
30
129
|
console.log();
|
|
31
|
-
console.log(
|
|
32
|
-
console.log(chalk_1.default.cyan("
|
|
130
|
+
console.log(" 2. Set in XDG config:");
|
|
131
|
+
console.log(chalk_1.default.cyan(" npm run setup"));
|
|
33
132
|
console.log();
|
|
34
133
|
console.log(chalk_1.default.yellow("Example:"));
|
|
35
134
|
console.log(chalk_1.default.cyan(" npx @quiltdata/benchling-webhook deploy \\"));
|
|
36
|
-
console.log(chalk_1.default.cyan(" --quilt-stack-arn \"arn:aws:cloudformation:us-east-1:123456789012:stack/QuiltStack/abc123\""));
|
|
135
|
+
console.log(chalk_1.default.cyan(" --quilt-stack-arn \"arn:aws:cloudformation:us-east-1:123456789012:stack/QuiltStack/abc123\" \\"));
|
|
136
|
+
console.log(chalk_1.default.cyan(" --benchling-secret \"quiltdata/benchling-webhook/default/my-tenant\""));
|
|
37
137
|
console.log();
|
|
38
138
|
process.exit(1);
|
|
39
139
|
}
|
|
40
|
-
// Deploy
|
|
41
|
-
return await deploy(quiltStackArn, benchlingSecret, options);
|
|
140
|
+
// Deploy (both parameters validated above)
|
|
141
|
+
return await deploy(quiltStackArn, benchlingSecret, { ...options, imageTag });
|
|
42
142
|
}
|
|
43
143
|
/**
|
|
44
144
|
* Deploy the Benchling webhook stack
|
|
@@ -177,60 +277,69 @@ async function deploy(quiltStackArn, benchlingSecret, options) {
|
|
|
177
277
|
});
|
|
178
278
|
console.log();
|
|
179
279
|
spinner.succeed("Stack deployed successfully");
|
|
180
|
-
//
|
|
181
|
-
|
|
182
|
-
|
|
280
|
+
// After successful deployment, store endpoint and run tests
|
|
281
|
+
console.log();
|
|
282
|
+
console.log("Retrieving deployment endpoint...");
|
|
183
283
|
try {
|
|
184
|
-
|
|
185
|
-
const
|
|
186
|
-
const
|
|
187
|
-
region: deployRegion,
|
|
188
|
-
});
|
|
189
|
-
const command = new DescribeStacksCommand({
|
|
190
|
-
StackName: "BenchlingWebhookStack",
|
|
191
|
-
});
|
|
284
|
+
const cloudformation = new client_cloudformation_1.CloudFormationClient({ region: deployRegion });
|
|
285
|
+
const stackName = "BenchlingWebhookStack";
|
|
286
|
+
const command = new client_cloudformation_1.DescribeStacksCommand({ StackName: stackName });
|
|
192
287
|
const response = await cloudformation.send(command);
|
|
193
288
|
if (response.Stacks && response.Stacks.length > 0) {
|
|
194
289
|
const stack = response.Stacks[0];
|
|
195
|
-
const
|
|
196
|
-
webhookUrl =
|
|
197
|
-
|
|
198
|
-
|
|
199
|
-
|
|
200
|
-
|
|
201
|
-
|
|
202
|
-
|
|
203
|
-
|
|
204
|
-
|
|
205
|
-
|
|
206
|
-
|
|
207
|
-
|
|
208
|
-
|
|
209
|
-
|
|
210
|
-
|
|
211
|
-
|
|
212
|
-
|
|
213
|
-
|
|
290
|
+
const endpointOutput = stack.Outputs?.find((o) => o.OutputKey === "WebhookEndpoint");
|
|
291
|
+
const webhookUrl = endpointOutput?.OutputValue || "";
|
|
292
|
+
if (webhookUrl) {
|
|
293
|
+
// Determine image tag
|
|
294
|
+
const imageTag = options.imageTag || "latest";
|
|
295
|
+
// Store prod deployment config
|
|
296
|
+
storeDeploymentConfig('prod', {
|
|
297
|
+
endpoint: webhookUrl,
|
|
298
|
+
imageTag: imageTag,
|
|
299
|
+
deployedAt: new Date().toISOString(),
|
|
300
|
+
stackName: stackName,
|
|
301
|
+
region: deployRegion,
|
|
302
|
+
});
|
|
303
|
+
// Run production tests
|
|
304
|
+
console.log();
|
|
305
|
+
console.log("Running production integration tests...");
|
|
306
|
+
try {
|
|
307
|
+
(0, child_process_1.execSync)("npm run test:prod", {
|
|
308
|
+
stdio: "inherit",
|
|
309
|
+
cwd: process.cwd()
|
|
310
|
+
});
|
|
311
|
+
console.log();
|
|
312
|
+
console.log("✅ Production deployment and tests completed successfully!");
|
|
313
|
+
}
|
|
314
|
+
catch (testError) {
|
|
315
|
+
console.error();
|
|
316
|
+
console.error("❌ Production tests failed!");
|
|
317
|
+
console.error(" Deployment completed but tests did not pass.");
|
|
318
|
+
console.error(" Review test output above for details.");
|
|
319
|
+
process.exit(1);
|
|
320
|
+
}
|
|
321
|
+
// Success message with webhook URL
|
|
322
|
+
console.log();
|
|
323
|
+
console.log((0, boxen_1.default)(`${chalk_1.default.green.bold("✓ Deployment and Testing Complete!")}\n\n` +
|
|
324
|
+
`Stack: ${chalk_1.default.cyan("BenchlingWebhookStack")}\n` +
|
|
325
|
+
`Region: ${chalk_1.default.cyan(deployRegion)}\n` +
|
|
326
|
+
`Webhook URL: ${chalk_1.default.cyan(webhookUrl)}\n\n` +
|
|
327
|
+
`${chalk_1.default.bold("Next steps:")}\n` +
|
|
328
|
+
" 1. Set the webhook URL in your Benchling app settings:\n" +
|
|
329
|
+
` ${chalk_1.default.cyan(webhookUrl)}\n\n` +
|
|
330
|
+
" 2. Test the integration by creating a Quilt package in Benchling\n\n" +
|
|
331
|
+
`${chalk_1.default.dim("For more info: https://github.com/quiltdata/benchling-webhook#readme")}`, { padding: 1, borderColor: "green", borderStyle: "round" }));
|
|
214
332
|
}
|
|
215
333
|
else {
|
|
216
|
-
|
|
334
|
+
console.warn("⚠️ Could not retrieve WebhookEndpoint from stack outputs");
|
|
335
|
+
console.warn(" Skipping test execution");
|
|
217
336
|
}
|
|
218
337
|
}
|
|
219
|
-
catch {
|
|
220
|
-
spinner.warn("Could not test webhook endpoint");
|
|
221
|
-
}
|
|
222
338
|
}
|
|
223
|
-
|
|
224
|
-
|
|
225
|
-
|
|
226
|
-
|
|
227
|
-
`Region: ${chalk_1.default.cyan(deployRegion)}\n` +
|
|
228
|
-
(webhookUrl ? `Webhook URL: ${chalk_1.default.cyan(webhookUrl)}\n\n` : "\n") +
|
|
229
|
-
`${chalk_1.default.bold("Next steps:")}\n` +
|
|
230
|
-
" 1. Set the webhook URL in your Benchling app settings:\n" +
|
|
231
|
-
` ${chalk_1.default.cyan(webhookUrl || "<WEBHOOK_URL>")}\n\n` +
|
|
232
|
-
" 2. Test the integration by creating a Quilt package in Benchling\n\n" +
|
|
233
|
-
`${chalk_1.default.dim("For more info: https://github.com/quiltdata/benchling-webhook#readme")}`, { padding: 1, borderColor: "green", borderStyle: "round" }));
|
|
339
|
+
catch (error) {
|
|
340
|
+
console.warn(`⚠️ Could not retrieve/test deployment endpoint: ${error.message}`);
|
|
341
|
+
console.warn(" Deployment succeeded but tests were skipped");
|
|
342
|
+
}
|
|
234
343
|
}
|
|
235
344
|
catch (error) {
|
|
236
345
|
spinner.fail("Deployment failed");
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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|
|
1
|
+
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{"version":3,"file":"setup-wizard.d.ts","sourceRoot":"","sources":["../../../bin/commands/setup-wizard.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAKH;;;;;;;;;;GAUG;AACH,wBAAsB,kBAAkB,IAAI,OAAO,CAAC,IAAI,CAAC,
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{"version":3,"file":"setup-wizard.d.ts","sourceRoot":"","sources":["../../../bin/commands/setup-wizard.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAKH;;;;;;;;;;GAUG;AACH,wBAAsB,kBAAkB,IAAI,OAAO,CAAC,IAAI,CAAC,CA4CxD"}
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@@ -8,6 +8,39 @@
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*
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* @module commands/setup-wizard
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var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
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desc = { enumerable: true, get: function() { return m[k]; } };
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var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
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return function (mod) {
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var result = {};
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if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
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__setModuleDefault(result, mod);
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return result;
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};
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})();
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var __importDefault = (this && this.__importDefault) || function (mod) {
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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@@ -31,7 +64,8 @@ async function setupWizardCommand() {
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console.log("This wizard will guide you through:");
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console.log(" 1. Collecting configuration (Benchling credentials, AWS settings)");
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|
console.log(" 2. Validating credentials and access");
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console.log(" 3. Saving configuration for deployment
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console.log(" 3. Saving configuration for deployment");
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console.log(" 4. Deploying to AWS (optional)\n");
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35
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|
console.log(chalk_1.default.dim("Press Ctrl+C at any time to exit\n"));
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|
// Run the existing install wizard
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|
await (0, install_wizard_1.runInstallWizard)({
|
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@@ -39,9 +73,31 @@ async function setupWizardCommand() {
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73
|
skipValidation: false,
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74
|
});
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|
console.log(chalk_1.default.green.bold("\n✓ Setup complete!\n"));
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|
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-
|
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|
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// Ask if user wants to deploy now
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const inquirer = (await Promise.resolve().then(() => __importStar(require("inquirer")))).default;
|
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|
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const { shouldDeploy } = await inquirer.prompt([
|
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{
|
|
80
|
+
type: "confirm",
|
|
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|
+
name: "shouldDeploy",
|
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|
+
message: "Would you like to deploy to AWS now?",
|
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|
+
default: true,
|
|
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|
+
},
|
|
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|
+
]);
|
|
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|
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if (shouldDeploy) {
|
|
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|
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console.log(chalk_1.default.cyan("\n📦 Starting deployment...\n"));
|
|
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|
+
const { deployCommand } = await Promise.resolve().then(() => __importStar(require("./deploy")));
|
|
89
|
+
await deployCommand({});
|
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|
+
console.log(chalk_1.default.green.bold("\n✓ Deployment complete!\n"));
|
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+
console.log("Next steps:");
|
|
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+
console.log(chalk_1.default.cyan(" • Set webhook URL in Benchling app settings"));
|
|
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|
+
console.log(chalk_1.default.cyan(" • Install the app in your Benchling tenant"));
|
|
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console.log(chalk_1.default.cyan(" • Test integration: npx @quiltdata/benchling-webhook test"));
|
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|
+
}
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|
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|
+
else {
|
|
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console.log("\nNext steps:");
|
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|
+
console.log(chalk_1.default.cyan(" • Run deployment: npx @quiltdata/benchling-webhook deploy"));
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|
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|
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console.log(chalk_1.default.cyan(" • Test integration: npx @quiltdata/benchling-webhook test"));
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|
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}
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|
console.log(chalk_1.default.dim("\nFor more information: https://github.com/quiltdata/benchling-webhook\n"));
|
|
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102
|
}
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|
//# sourceMappingURL=setup-wizard.js.map
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|
@@ -1 +1 @@
|
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1
|
-
{"version":3,"file":"setup-wizard.js","sourceRoot":"","sources":["../../../bin/commands/setup-wizard.ts"],"names":[],"mappings":";AAAA;;;;;;;;GAQG
|
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1
|
+
{"version":3,"file":"setup-wizard.js","sourceRoot":"","sources":["../../../bin/commands/setup-wizard.ts"],"names":[],"mappings":";AAAA;;;;;;;;GAQG;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAgBH,gDA4CC;AA1DD,kDAA0B;AAC1B,iEAAgE;AAEhE;;;;;;;;;;GAUG;AACI,KAAK,UAAU,kBAAkB;IACpC,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,IAAI,CAAC,IAAI,CAAC,uCAAuC,CAAC,CAAC,CAAC;IACtE,OAAO,CAAC,GAAG,CAAC,qCAAqC,CAAC,CAAC;IACnD,OAAO,CAAC,GAAG,CAAC,qEAAqE,CAAC,CAAC;IACnF,OAAO,CAAC,GAAG,CAAC,wCAAwC,CAAC,CAAC;IACtD,OAAO,CAAC,GAAG,CAAC,0CAA0C,CAAC,CAAC;IACxD,OAAO,CAAC,GAAG,CAAC,oCAAoC,CAAC,CAAC;IAClD,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,GAAG,CAAC,oCAAoC,CAAC,CAAC,CAAC;IAE7D,kCAAkC;IAClC,MAAM,IAAA,iCAAgB,EAAC;QACnB,cAAc,EAAE,KAAK;QACrB,cAAc,EAAE,KAAK;KACxB,CAAC,CAAC;IAEH,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,KAAK,CAAC,IAAI,CAAC,uBAAuB,CAAC,CAAC,CAAC;IAEvD,kCAAkC;IAClC,MAAM,QAAQ,GAAG,CAAC,wDAAa,UAAU,GAAC,CAAC,CAAC,OAAO,CAAC;IACpD,MAAM,EAAE,YAAY,EAAE,GAAG,MAAM,QAAQ,CAAC,MAAM,CAAC;QAC3C;YACI,IAAI,EAAE,SAAS;YACf,IAAI,EAAE,cAAc;YACpB,OAAO,EAAE,sCAAsC;YAC/C,OAAO,EAAE,IAAI;SAChB;KACJ,CAAC,CAAC;IAEH,IAAI,YAAY,EAAE,CAAC;QACf,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,IAAI,CAAC,+BAA+B,CAAC,CAAC,CAAC;QACzD,MAAM,EAAE,aAAa,EAAE,GAAG,wDAAa,UAAU,GAAC,CAAC;QACnD,MAAM,aAAa,CAAC,EAAE,CAAC,CAAC;QACxB,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,KAAK,CAAC,IAAI,CAAC,4BAA4B,CAAC,CAAC,CAAC;QAC5D,OAAO,CAAC,GAAG,CAAC,aAAa,CAAC,CAAC;QAC3B,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,IAAI,CAAC,+CAA+C,CAAC,CAAC,CAAC;QACzE,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,IAAI,CAAC,8CAA8C,CAAC,CAAC,CAAC;QACxE,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,IAAI,CAAC,6DAA6D,CAAC,CAAC,CAAC;IAC3F,CAAC;SAAM,CAAC;QACJ,OAAO,CAAC,GAAG,CAAC,eAAe,CAAC,CAAC;QAC7B,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,IAAI,CAAC,6DAA6D,CAAC,CAAC,CAAC;QACvF,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,IAAI,CAAC,6DAA6D,CAAC,CAAC,CAAC;IAC3F,CAAC;IAED,OAAO,CAAC,GAAG,CAAC,eAAK,CAAC,GAAG,CAAC,0EAA0E,CAAC,CAAC,CAAC;AACvG,CAAC"}
|
package/dist/bin/get-env.d.ts
CHANGED
|
@@ -9,8 +9,8 @@
|
|
|
9
9
|
* 4. Generate environment variables for .env
|
|
10
10
|
*
|
|
11
11
|
* Usage:
|
|
12
|
-
* node bin/get-env.
|
|
13
|
-
* node bin/get-env.
|
|
12
|
+
* node bin/get-env.ts https://quilt-catalog.yourcompany.com
|
|
13
|
+
* node bin/get-env.ts https://quilt-catalog.yourcompany.com --write
|
|
14
14
|
*/
|
|
15
15
|
export * from "../lib/utils/stack-inference";
|
|
16
16
|
//# sourceMappingURL=get-env.d.ts.map
|
package/dist/bin/get-env.js
CHANGED
|
@@ -10,8 +10,8 @@
|
|
|
10
10
|
* 4. Generate environment variables for .env
|
|
11
11
|
*
|
|
12
12
|
* Usage:
|
|
13
|
-
* node bin/get-env.
|
|
14
|
-
* node bin/get-env.
|
|
13
|
+
* node bin/get-env.ts https://quilt-catalog.yourcompany.com
|
|
14
|
+
* node bin/get-env.ts https://quilt-catalog.yourcompany.com --write
|
|
15
15
|
*/
|
|
16
16
|
var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
|
|
17
17
|
if (k2 === undefined) k2 = k;
|
|
@@ -79,7 +79,7 @@ function formatEnvVars(vars) {
|
|
|
79
79
|
lines.push("# ==============================================================================");
|
|
80
80
|
lines.push("# INFERRED CONFIGURATION");
|
|
81
81
|
lines.push("# ==============================================================================");
|
|
82
|
-
lines.push("# Generated by: bin/get-env.
|
|
82
|
+
lines.push("# Generated by: bin/get-env.ts");
|
|
83
83
|
lines.push("# Date: " + new Date().toISOString());
|
|
84
84
|
lines.push("#");
|
|
85
85
|
lines.push("# ⚠️ IMPORTANT: Review and verify all values before using!");
|
|
@@ -114,7 +114,7 @@ function formatEnvVars(vars) {
|
|
|
114
114
|
* Print help
|
|
115
115
|
*/
|
|
116
116
|
function printHelp() {
|
|
117
|
-
console.log("Usage: node bin/get-env.
|
|
117
|
+
console.log("Usage: node bin/get-env.ts <catalog-url> [options]");
|
|
118
118
|
console.log("");
|
|
119
119
|
console.log("Arguments:");
|
|
120
120
|
console.log(" catalog-url URL of Quilt catalog (e.g., https://quilt-catalog.yourcompany.com)");
|
|
@@ -125,9 +125,9 @@ function printHelp() {
|
|
|
125
125
|
console.log(" --help, -h Show this help message");
|
|
126
126
|
console.log("");
|
|
127
127
|
console.log("Examples:");
|
|
128
|
-
console.log(" node bin/get-env.
|
|
129
|
-
console.log(" node bin/get-env.
|
|
130
|
-
console.log(" node bin/get-env.
|
|
128
|
+
console.log(" node bin/get-env.ts https://nightly.quilttest.com");
|
|
129
|
+
console.log(" node bin/get-env.ts https://nightly.quilttest.com --write");
|
|
130
|
+
console.log(" node bin/get-env.ts https://nightly.quilttest.com --output=env.staging");
|
|
131
131
|
console.log("");
|
|
132
132
|
console.log("Description:");
|
|
133
133
|
console.log(" This script fetches config.json from a Quilt catalog and infers");
|
|
@@ -191,7 +191,7 @@ async function main() {
|
|
|
191
191
|
else {
|
|
192
192
|
console.log("=".repeat(80));
|
|
193
193
|
console.log("To save this configuration, run:");
|
|
194
|
-
console.log(` node bin/get-env.
|
|
194
|
+
console.log(` node bin/get-env.ts ${catalogUrl} --write`);
|
|
195
195
|
console.log("=".repeat(80));
|
|
196
196
|
console.log("");
|
|
197
197
|
}
|
package/dist/bin/release.d.ts
CHANGED
|
@@ -3,9 +3,9 @@
|
|
|
3
3
|
* Release management script - creates and pushes git tags
|
|
4
4
|
*
|
|
5
5
|
* Usage:
|
|
6
|
-
* node bin/release.
|
|
7
|
-
* node bin/release.
|
|
8
|
-
* node bin/release.
|
|
6
|
+
* node bin/release.ts # Create production release from current version
|
|
7
|
+
* node bin/release.ts dev # Create dev release with timestamp from current version
|
|
8
|
+
* node bin/release.ts --no-push # Create tag but don't push
|
|
9
9
|
*/
|
|
10
10
|
export {};
|
|
11
11
|
//# sourceMappingURL=release.d.ts.map
|
package/dist/bin/release.js
CHANGED
|
@@ -4,9 +4,9 @@
|
|
|
4
4
|
* Release management script - creates and pushes git tags
|
|
5
5
|
*
|
|
6
6
|
* Usage:
|
|
7
|
-
* node bin/release.
|
|
8
|
-
* node bin/release.
|
|
9
|
-
* node bin/release.
|
|
7
|
+
* node bin/release.ts # Create production release from current version
|
|
8
|
+
* node bin/release.ts dev # Create dev release with timestamp from current version
|
|
9
|
+
* node bin/release.ts --no-push # Create tag but don't push
|
|
10
10
|
*/
|
|
11
11
|
var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
|
|
12
12
|
if (k2 === undefined) k2 = k;
|
|
@@ -118,7 +118,7 @@ function main() {
|
|
|
118
118
|
if (args.includes("--help") || args.includes("-h")) {
|
|
119
119
|
console.log("Current version:", version);
|
|
120
120
|
console.log("");
|
|
121
|
-
console.log("Usage: node bin/release.
|
|
121
|
+
console.log("Usage: node bin/release.ts [dev] [--no-push]");
|
|
122
122
|
console.log("");
|
|
123
123
|
console.log("Commands:");
|
|
124
124
|
console.log(" (no args) - Create production release tag and push");
|
|
@@ -128,9 +128,9 @@ function main() {
|
|
|
128
128
|
console.log(" --no-push - Create tag but do not push to origin");
|
|
129
129
|
console.log("");
|
|
130
130
|
console.log("Examples:");
|
|
131
|
-
console.log(" node bin/release.
|
|
132
|
-
console.log(" node bin/release.
|
|
133
|
-
console.log(" node bin/release.
|
|
131
|
+
console.log(" node bin/release.ts # Create v0.4.12 and push");
|
|
132
|
+
console.log(" node bin/release.ts dev # Create v0.4.12-20251027T123456Z and push");
|
|
133
|
+
console.log(" node bin/release.ts --no-push # Create tag but don't push");
|
|
134
134
|
process.exit(0);
|
|
135
135
|
}
|
|
136
136
|
console.log(`Creating ${isDev ? "dev" : "production"} release from version: ${version}`);
|
|
@@ -7,8 +7,8 @@ const child_process_1 = require("child_process");
|
|
|
7
7
|
// Parse command line arguments
|
|
8
8
|
const args = process.argv.slice(2);
|
|
9
9
|
if (args.length === 0) {
|
|
10
|
-
console.error("Usage: test-invalid-signature.
|
|
11
|
-
console.error("Example: test-invalid-signature.
|
|
10
|
+
console.error("Usage: test-invalid-signature.ts <webhook-url>");
|
|
11
|
+
console.error("Example: test-invalid-signature.ts https://example.com/prod/lifecycle");
|
|
12
12
|
process.exit(1);
|
|
13
13
|
}
|
|
14
14
|
const webhookUrl = args[0];
|
package/dist/bin/version.d.ts
CHANGED
|
@@ -3,11 +3,11 @@
|
|
|
3
3
|
* Version management script - bumps version numbers across all files
|
|
4
4
|
*
|
|
5
5
|
* Usage:
|
|
6
|
-
* node bin/version.
|
|
7
|
-
* node bin/version.
|
|
8
|
-
* node bin/version.
|
|
9
|
-
* node bin/version.
|
|
10
|
-
* node bin/version.
|
|
6
|
+
* node bin/version.ts # Show all three version files
|
|
7
|
+
* node bin/version.ts patch # 0.4.7 -> 0.4.8
|
|
8
|
+
* node bin/version.ts minor # 0.4.7 -> 0.5.0
|
|
9
|
+
* node bin/version.ts major # 0.4.7 -> 1.0.0
|
|
10
|
+
* node bin/version.ts sync # Force TOML and YAML to match JSON version
|
|
11
11
|
*/
|
|
12
12
|
export {};
|
|
13
13
|
//# sourceMappingURL=version.d.ts.map
|
package/dist/bin/version.js
CHANGED
|
@@ -4,11 +4,11 @@
|
|
|
4
4
|
* Version management script - bumps version numbers across all files
|
|
5
5
|
*
|
|
6
6
|
* Usage:
|
|
7
|
-
* node bin/version.
|
|
8
|
-
* node bin/version.
|
|
9
|
-
* node bin/version.
|
|
10
|
-
* node bin/version.
|
|
11
|
-
* node bin/version.
|
|
7
|
+
* node bin/version.ts # Show all three version files
|
|
8
|
+
* node bin/version.ts patch # 0.4.7 -> 0.4.8
|
|
9
|
+
* node bin/version.ts minor # 0.4.7 -> 0.5.0
|
|
10
|
+
* node bin/version.ts major # 0.4.7 -> 1.0.0
|
|
11
|
+
* node bin/version.ts sync # Force TOML and YAML to match JSON version
|
|
12
12
|
*/
|
|
13
13
|
var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
|
|
14
14
|
if (k2 === undefined) k2 = k;
|
|
@@ -127,7 +127,7 @@ function main() {
|
|
|
127
127
|
console.log("\n✅ All versions are in sync");
|
|
128
128
|
}
|
|
129
129
|
else {
|
|
130
|
-
console.log("\n⚠️ Versions are out of sync! Run \"node bin/version.
|
|
130
|
+
console.log("\n⚠️ Versions are out of sync! Run \"node bin/version.ts sync\" to fix.");
|
|
131
131
|
}
|
|
132
132
|
process.exit(0);
|
|
133
133
|
}
|
|
@@ -135,7 +135,7 @@ function main() {
|
|
|
135
135
|
if (args.includes("--help") || args.includes("-h")) {
|
|
136
136
|
console.log("Current version:", pkg.version);
|
|
137
137
|
console.log("");
|
|
138
|
-
console.log("Usage: node bin/version.
|
|
138
|
+
console.log("Usage: node bin/version.ts [command]");
|
|
139
139
|
console.log("");
|
|
140
140
|
console.log("Commands:");
|
|
141
141
|
console.log(" (no args) - Display all three version files");
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"xdg-config.d.ts","sourceRoot":"","sources":["../../lib/xdg-config.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAQH,OAAO,EAIH,UAAU,EACV,WAAW,EACX,cAAc,EACd,SAAS,EACT,aAAa,EAChB,MAAM,gBAAgB,CAAC;AAExB;;GAEG;AACH,MAAM,WAAW,UAAU;IACvB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;CAC1B;AAGD,YAAY,EAAE,UAAU,EAAE,cAAc,EAAE,SAAS,EAAE,CAAC;AAyDtD;;;;GAIG;AACH,qBAAa,SAAS;IAClB,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAS;IAEjC;;;;OAIG;gBACS,OAAO,CAAC,EAAE,MAAM;IAI5B;;;;OAIG;IACH,OAAO,CAAC,iBAAiB;IAKzB;;;;;OAKG;IACH,OAAO,CAAC,MAAM,CAAC,aAAa;IAK5B;;;;OAIG;WACW,QAAQ,IAAI,cAAc;IAWxC;;;;OAIG;IACI,QAAQ,IAAI,cAAc;IAQjC;;;;;;OAMG;IACI,iBAAiB,IAAI,IAAI;IAmBhC;;;;;OAKG;IACH,OAAO,CAAC,aAAa;IAcrB;;;;;;OAMG;IACI,UAAU,CAAC,UAAU,EAAE,UAAU,GAAG,UAAU;IAqCrD;;;;;OAKG;IACI,aAAa,CAAC,UAAU,EAAE,UAAU,GAAG,MAAM;IAKpD;;;;;OAKG;IACH,OAAO,CAAC,oBAAoB;IAW5B;;;;;;;;;OASG;IACI,WAAW,CAAC,UAAU,EAAE,UAAU,EAAE,MAAM,EAAE,UAAU,GAAG,IAAI;
|
|
1
|
+
{"version":3,"file":"xdg-config.d.ts","sourceRoot":"","sources":["../../lib/xdg-config.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAQH,OAAO,EAIH,UAAU,EACV,WAAW,EACX,cAAc,EACd,SAAS,EACT,aAAa,EAChB,MAAM,gBAAgB,CAAC;AAExB;;GAEG;AACH,MAAM,WAAW,UAAU;IACvB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;CAC1B;AAGD,YAAY,EAAE,UAAU,EAAE,cAAc,EAAE,SAAS,EAAE,CAAC;AAyDtD;;;;GAIG;AACH,qBAAa,SAAS;IAClB,OAAO,CAAC,QAAQ,CAAC,OAAO,CAAS;IAEjC;;;;OAIG;gBACS,OAAO,CAAC,EAAE,MAAM;IAI5B;;;;OAIG;IACH,OAAO,CAAC,iBAAiB;IAKzB;;;;;OAKG;IACH,OAAO,CAAC,MAAM,CAAC,aAAa;IAK5B;;;;OAIG;WACW,QAAQ,IAAI,cAAc;IAWxC;;;;OAIG;IACI,QAAQ,IAAI,cAAc;IAQjC;;;;;;OAMG;IACI,iBAAiB,IAAI,IAAI;IAmBhC;;;;;OAKG;IACH,OAAO,CAAC,aAAa;IAcrB;;;;;;OAMG;IACI,UAAU,CAAC,UAAU,EAAE,UAAU,GAAG,UAAU;IAqCrD;;;;;OAKG;IACI,aAAa,CAAC,UAAU,EAAE,UAAU,GAAG,MAAM;IAKpD;;;;;OAKG;IACH,OAAO,CAAC,oBAAoB;IAW5B;;;;;;;;;OASG;IACI,WAAW,CAAC,UAAU,EAAE,UAAU,EAAE,MAAM,EAAE,UAAU,GAAG,IAAI;IA8CpE;;;;;;;;;OASG;IACI,YAAY,CAAC,OAAO,EAAE,SAAS,GAAG,UAAU;IAyBnD;;;;;OAKG;IACI,aAAa,CAAC,WAAW,GAAE,WAAuB,GAAG,MAAM;IAOlE;;;;;OAKG;IACI,eAAe,CAAC,WAAW,GAAE,WAAuB,GAAG,cAAc;IAU5E;;;;OAIG;IACI,wBAAwB,CAAC,WAAW,GAAE,WAAuB,GAAG,IAAI;IAqB3E;;;;OAIG;IACI,YAAY,IAAI,WAAW,EAAE;IAepC;;;;;OAKG;IACI,aAAa,CAAC,WAAW,EAAE,WAAW,GAAG,OAAO;IAKvD;;;;;;;OAOG;IACI,iBAAiB,CAAC,UAAU,EAAE,UAAU,EAAE,WAAW,GAAE,WAAuB,GAAG,UAAU;IA4ClG;;;;;;;OAOG;IACI,kBAAkB,CACrB,UAAU,EAAE,UAAU,EACtB,MAAM,EAAE,UAAU,EAClB,WAAW,GAAE,WAAuB,GACrC,IAAI;IAuDP;;;;;OAKG;IACI,WAAW,CAAC,WAAW,GAAE,WAAuB,GAAG,aAAa;IAqCvE;;;;;;;OAOG;IACI,aAAa,CAAC,WAAW,EAAE,WAAW,GAAG,IAAI;CAevD"}
|
package/dist/lib/xdg-config.js
CHANGED
|
@@ -282,6 +282,10 @@ class XDGConfig {
|
|
|
282
282
|
}
|
|
283
283
|
catch {
|
|
284
284
|
// Fall back to copy+delete for cross-device scenarios (Windows)
|
|
285
|
+
// Ensure parent directory exists before copy (in case rename failed due to cross-device)
|
|
286
|
+
if (!(0, fs_1.existsSync)(configDir)) {
|
|
287
|
+
(0, fs_1.mkdirSync)(configDir, { recursive: true });
|
|
288
|
+
}
|
|
285
289
|
(0, fs_1.copyFileSync)(tempPath, configPath);
|
|
286
290
|
(0, fs_1.unlinkSync)(tempPath);
|
|
287
291
|
}
|
|
@@ -1 +1 @@
|
|
|
1
|
-
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1
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+
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|
package/dist/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@quiltdata/benchling-webhook",
|
|
3
|
-
"version": "0.6.
|
|
3
|
+
"version": "0.6.3-20251104T170954Z",
|
|
4
4
|
"description": "AWS CDK deployment for Benchling webhook processing using Fargate - Deploy directly with npx",
|
|
5
5
|
"main": "dist/lib/index.js",
|
|
6
6
|
"types": "dist/lib/index.d.ts",
|
|
@@ -33,7 +33,9 @@
|
|
|
33
33
|
"setup:sync-secrets": "ts-node scripts/sync-secrets.ts",
|
|
34
34
|
"test": "npm run build:typecheck && npm run test:ts && npm run test:python",
|
|
35
35
|
"test:ci": "npm run build:typecheck && npm run test:ts",
|
|
36
|
+
"test:dev": "make -C docker test-deployed-dev",
|
|
36
37
|
"test:local": "make -C docker build && make -C docker test-local",
|
|
38
|
+
"test:prod": "make -C docker test-deployed-prod",
|
|
37
39
|
"test:python": "make -C docker test-unit",
|
|
38
40
|
"test:remote": "npm run deploy:dev && make -C docker test-deployed-dev",
|
|
39
41
|
"test:ts": "cross-env NODE_ENV=test jest --maxWorkers=50%",
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@quiltdata/benchling-webhook",
|
|
3
|
-
"version": "0.6.
|
|
3
|
+
"version": "0.6.3-20251104T170954Z",
|
|
4
4
|
"description": "AWS CDK deployment for Benchling webhook processing using Fargate - Deploy directly with npx",
|
|
5
5
|
"main": "dist/lib/index.js",
|
|
6
6
|
"types": "dist/lib/index.d.ts",
|
|
@@ -33,7 +33,9 @@
|
|
|
33
33
|
"setup:sync-secrets": "ts-node scripts/sync-secrets.ts",
|
|
34
34
|
"test": "npm run build:typecheck && npm run test:ts && npm run test:python",
|
|
35
35
|
"test:ci": "npm run build:typecheck && npm run test:ts",
|
|
36
|
+
"test:dev": "make -C docker test-deployed-dev",
|
|
36
37
|
"test:local": "make -C docker build && make -C docker test-local",
|
|
38
|
+
"test:prod": "make -C docker test-deployed-prod",
|
|
37
39
|
"test:python": "make -C docker test-unit",
|
|
38
40
|
"test:remote": "npm run deploy:dev && make -C docker test-deployed-dev",
|
|
39
41
|
"test:ts": "cross-env NODE_ENV=test jest --maxWorkers=50%",
|