@quiltdata/benchling-webhook 0.16.0 → 0.17.0-20260414T022608Z

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Files changed (12) hide show
  1. package/dist/lib/benchling-webhook-stack.d.ts.map +1 -1
  2. package/dist/lib/benchling-webhook-stack.js +17 -22
  3. package/dist/lib/benchling-webhook-stack.js.map +1 -1
  4. package/dist/lib/fargate-service.d.ts +2 -0
  5. package/dist/lib/fargate-service.d.ts.map +1 -1
  6. package/dist/lib/fargate-service.js +19 -0
  7. package/dist/lib/fargate-service.js.map +1 -1
  8. package/dist/lib/rest-api-gateway.d.ts.map +1 -1
  9. package/dist/lib/rest-api-gateway.js +5 -6
  10. package/dist/lib/rest-api-gateway.js.map +1 -1
  11. package/dist/package.json +2 -2
  12. package/package.json +2 -2
package/dist/lib/benchling-webhook-stack.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"benchling-webhook-stack.d.ts","sourceRoot":"","sources":["../../lib/benchling-webhook-stack.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,GAAG,MAAM,aAAa,CAAC;AAOnC,OAAO,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAIvC,OAAO,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAC;AAGnD;;;;;;GAMG;AACH,MAAM,WAAW,0BAA2B,SAAQ,GAAG,CAAC,UAAU;IAC9D;;;OAGG;IACH,QAAQ,CAAC,MAAM,EAAE,WAAW,CAAC;CAChC;AAED,qBAAa,qBAAsB,SAAQ,GAAG,CAAC,KAAK;IAChD,OAAO,CAAC,QAAQ,CAAC,cAAc,CAAiB;IAChD,OAAO,CAAC,QAAQ,CAAC,GAAG,CAAsB;IAC1C,OAAO,CAAC,QAAQ,CAAC,GAAG,CAAiB;IACrC,SAAgB,eAAe,EAAE,MAAM,CAAC;gBAGpC,KAAK,EAAE,SAAS,EAChB,EAAE,EAAE,MAAM,EACV,KAAK,EAAE,0BAA0B;CA+WxC"}
1
+ {"version":3,"file":"benchling-webhook-stack.d.ts","sourceRoot":"","sources":["../../lib/benchling-webhook-stack.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,GAAG,MAAM,aAAa,CAAC;AAOnC,OAAO,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AAIvC,OAAO,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAC;AAGnD;;;;;;GAMG;AACH,MAAM,WAAW,0BAA2B,SAAQ,GAAG,CAAC,UAAU;IAC9D;;;OAGG;IACH,QAAQ,CAAC,MAAM,EAAE,WAAW,CAAC;CAChC;AAED,qBAAa,qBAAsB,SAAQ,GAAG,CAAC,KAAK;IAChD,OAAO,CAAC,QAAQ,CAAC,cAAc,CAAiB;IAChD,OAAO,CAAC,QAAQ,CAAC,GAAG,CAAsB;IAC1C,OAAO,CAAC,QAAQ,CAAC,GAAG,CAAiB;IACrC,SAAgB,eAAe,EAAE,MAAM,CAAC;gBAGpC,KAAK,EAAE,SAAS,EAChB,EAAE,EAAE,MAAM,EACV,KAAK,EAAE,0BAA0B;CA0WxC"}
package/dist/lib/benchling-webhook-stack.js CHANGED
@@ -43,7 +43,7 @@ const ecr = __importStar(require("aws-cdk-lib/aws-ecr"));
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  const athena = __importStar(require("aws-cdk-lib/aws-athena"));
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  const events = __importStar(require("aws-cdk-lib/aws-events"));
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  const targets = __importStar(require("aws-cdk-lib/aws-events-targets"));
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- const iam = __importStar(require("aws-cdk-lib/aws-iam"));
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+ const sqs = __importStar(require("aws-cdk-lib/aws-sqs"));
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  const fargate_service_1 = require("./fargate-service");
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  const rest_api_gateway_1 = require("./rest-api-gateway");
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  const network_load_balancer_1 = require("./network-load-balancer");
@@ -240,6 +240,16 @@ class BenchlingWebhookStack extends cdk.Stack {
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  // (e.g., "0.7.0-20251104T000139Z"), otherwise use package.json version
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  const isDevVersion = imageTagValue.match(/^\d+\.\d+\.\d+-\d{8}T\d{6}Z$/);
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  const stackVersion = isDevVersion ? imageTagValue : package_json_1.default.version;
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+ const packageEventDlq = new sqs.Queue(this, "PackageEventDLQ", {
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+ retentionPeriod: cdk.Duration.days(14),
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+ });
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+ const packageEventQueue = new sqs.Queue(this, "PackageEventQueue", {
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+ visibilityTimeout: cdk.Duration.minutes(5),
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+ deadLetterQueue: {
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+ queue: packageEventDlq,
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+ maxReceiveCount: 5,
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+ },
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+ });
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  // Build Fargate Service props using new config structure
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  this.fargateService = new fargate_service_1.FargateService(this, "FargateService", {
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  vpc,
@@ -259,6 +269,7 @@ class BenchlingWebhookStack extends cdk.Stack {
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  // IAM managed policy ARNs for S3 and Athena access
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  bucketWritePolicyArn: config.quilt.bucketWritePolicyArn,
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  athenaUserPolicyArn: config.quilt.athenaUserPolicyArn,
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+ packageEventQueue,
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  // Legacy parameters
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  benchlingSecret: benchlingSecretValue,
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  packageBucket: packageBucketValue,
@@ -277,20 +288,6 @@ class BenchlingWebhookStack extends cdk.Stack {
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  config: config,
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  stage: stage,
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  });
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- const eventBridgeApiRole = new iam.Role(this, "EventBridgeApiInvokeRole", {
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- assumedBy: new iam.ServicePrincipal("events.amazonaws.com"),
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- description: "Allows EventBridge to invoke the package event API endpoint",
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- });
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- eventBridgeApiRole.addToPolicy(new iam.PolicyStatement({
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- actions: ["execute-api:Invoke"],
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- resources: [this.api.api.arnForExecuteApi("POST", "/package-event", stage)],
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- }));
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- this.api.api.addToResourcePolicy(new iam.PolicyStatement({
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- effect: iam.Effect.ALLOW,
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- principals: [new iam.ArnPrincipal(eventBridgeApiRole.roleArn)],
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- actions: ["execute-api:Invoke"],
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- resources: ["execute-api:/*/POST/package-event"],
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- }));
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  const packageRevisionRule = new events.Rule(this, "PackageRevisionRule", {
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  description: "Refresh Benchling canvases when Quilt publishes package revisions",
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  eventPattern: {
@@ -298,13 +295,7 @@ class BenchlingWebhookStack extends cdk.Stack {
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  detailType: ["package-revision"],
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  },
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  });
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- packageRevisionRule.addTarget(new targets.ApiGateway(this.api.api, {
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- stage,
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- method: "POST",
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- path: "/package-event",
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- eventRole: eventBridgeApiRole,
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- postBody: events.RuleTargetInput.fromEventPath("$"),
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- }));
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+ packageRevisionRule.addTarget(new targets.SqsQueue(packageEventQueue));
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  // Store webhook endpoint for easy access (REST API v1 with stage)
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  // REST API URL already includes the stage in the path (e.g., https://xxx.execute-api.region.amazonaws.com/stage/)
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  this.webhookEndpoint = this.api.api.url;
@@ -352,6 +343,10 @@ class BenchlingWebhookStack extends cdk.Stack {
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  value: this.nlb.targetGroup.targetGroupArn,
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  description: "NLB Target Group ARN for ECS tasks",
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  });
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+ new cdk.CfnOutput(this, "PackageEventQueueUrl", {
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+ value: packageEventQueue.queueUrl,
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+ description: "SQS queue URL for package revision events",
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+ });
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  }
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  }
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  exports.BenchlingWebhookStack = BenchlingWebhookStack;
package/dist/lib/benchling-webhook-stack.js.map CHANGED
@@ -1 +1 @@
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package/dist/lib/fargate-service.d.ts CHANGED
@@ -3,6 +3,7 @@ import * as ecr from "aws-cdk-lib/aws-ecr";
3
3
  import * as ecs from "aws-cdk-lib/aws-ecs";
4
4
  import * as elbv2 from "aws-cdk-lib/aws-elasticloadbalancingv2";
5
5
  import * as logs from "aws-cdk-lib/aws-logs";
6
+ import * as sqs from "aws-cdk-lib/aws-sqs";
6
7
  import { Construct } from "constructs";
7
8
  import { StackConfig } from "./types/stack-config";
8
9
  /**
@@ -28,6 +29,7 @@ export interface FargateServiceProps {
28
29
  readonly athenaUserWorkgroup?: string;
29
30
  readonly bucketWritePolicyArn?: string;
30
31
  readonly athenaUserPolicyArn?: string;
32
+ readonly packageEventQueue?: sqs.IQueue;
31
33
  readonly benchlingSecret: string;
32
34
  readonly packageBucket: string;
33
35
  readonly quiltDatabase: string;
package/dist/lib/fargate-service.d.ts.map CHANGED
@@ -1 +1 @@
1
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1
+ {"version":3,"file":"fargate-service.d.ts","sourceRoot":"","sources":["../../lib/fargate-service.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,GAAG,MAAM,qBAAqB,CAAC;AAC3C,OAAO,KAAK,GAAG,MAAM,qBAAqB,CAAC;AAC3C,OAAO,KAAK,GAAG,MAAM,qBAAqB,CAAC;AAC3C,OAAO,KAAK,KAAK,MAAM,wCAAwC,CAAC;AAEhE,OAAO,KAAK,IAAI,MAAM,sBAAsB,CAAC;AAC7C,OAAO,KAAK,GAAG,MAAM,qBAAqB,CAAC;AAC3C,OAAO,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AACvC,OAAO,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAC;AAEnD;;;;;;;;;GASG;AACH,MAAM,WAAW,mBAAmB;IAChC,QAAQ,CAAC,GAAG,EAAE,GAAG,CAAC,IAAI,CAAC;IACvB,QAAQ,CAAC,MAAM,EAAE,WAAW,CAAC;IAC7B,QAAQ,CAAC,aAAa,EAAE,GAAG,CAAC,WAAW,CAAC;IACxC,QAAQ,CAAC,WAAW,EAAE,KAAK,CAAC,mBAAmB,CAAC;IAChD,QAAQ,CAAC,QAAQ,CAAC,EAAE,MAAM,CAAC;IAC3B,QAAQ,CAAC,YAAY,CAAC,EAAE,MAAM,CAAC;IAI/B,QAAQ,CAAC,gBAAgB,EAAE,MAAM,CAAC;IAClC,QAAQ,CAAC,kBAAkB,EAAE,MAAM,CAAC;IACpC,QAAQ,CAAC,YAAY,EAAE,MAAM,CAAC;IAI9B,QAAQ,CAAC,mBAAmB,CAAC,EAAE,MAAM,CAAC;IAGtC,QAAQ,CAAC,oBAAoB,CAAC,EAAE,MAAM,CAAC;IACvC,QAAQ,CAAC,mBAAmB,CAAC,EAAE,MAAM,CAAC;IACtC,QAAQ,CAAC,iBAAiB,CAAC,EAAE,GAAG,CAAC,MAAM,CAAC;IAGxC,QAAQ,CAAC,eAAe,EAAE,MAAM,CAAC;IACjC,QAAQ,CAAC,aAAa,EAAE,MAAM,CAAC;IAC/B,QAAQ,CAAC,aAAa,EAAE,MAAM,CAAC;IAC/B,QAAQ,CAAC,QAAQ,CAAC,EAAE,MAAM,CAAC;CAC9B;AAED,qBAAa,cAAe,SAAQ,SAAS;IACzC,SAAgB,OAAO,EAAE,GAAG,CAAC,cAAc,CAAC;IAC5C,SAAgB,OAAO,EAAE,GAAG,CAAC,OAAO,CAAC;IACrC,SAAgB,QAAQ,EAAE,IAAI,CAAC,SAAS,CAAC;IACzC,SAAgB,aAAa,EAAE,GAAG,CAAC,cAAc,CAAC;IAElD;;;;;;;;;OASG;IACH,OAAO,CAAC,iBAAiB;gBAoBb,KAAK,EAAE,SAAS,EAAE,EAAE,EAAE,MAAM,EAAE,KAAK,EAAE,mBAAmB;CA8UvE"}
package/dist/lib/fargate-service.js CHANGED
@@ -235,6 +235,12 @@ class FargateService extends constructs_1.Construct {
235
235
  APP_ENV: "production",
236
236
  LOG_LEVEL: props.logLevel || "INFO", // StackConfig doesn't include logging level - use parameter default
237
237
  };
238
+ if (props.packageEventQueue) {
239
+ environmentVars.PACKAGE_EVENT_QUEUE_URL = props.packageEventQueue.queueUrl;
240
+ environmentVars.PACKAGE_EVENT_CONCURRENCY = "5";
241
+ environmentVars.PACKAGE_EVENT_GRACEFUL_TIMEOUT = "30";
242
+ props.packageEventQueue.grantConsumeMessages(taskRole);
243
+ }
238
244
  // Add container with configured environment
239
245
  const container = taskDefinition.addContainer("BenchlingWebhookContainer", {
240
246
  image: ecs.ContainerImage.fromEcrRepository(props.ecrRepository, props.imageTag || "latest"),
@@ -251,6 +257,19 @@ class FargateService extends constructs_1.Construct {
251
257
  startPeriod: cdk.Duration.seconds(60),
252
258
  },
253
259
  });
260
+ if (props.packageEventQueue) {
261
+ taskDefinition.addContainer("BenchlingPackageEventConsumer", {
262
+ image: ecs.ContainerImage.fromEcrRepository(props.ecrRepository, props.imageTag || "latest"),
263
+ command: ["python", "-m", "src.sqs_consumer"],
264
+ essential: true,
265
+ stopTimeout: cdk.Duration.seconds(30),
266
+ logging: ecs.LogDriver.awsLogs({
267
+ streamPrefix: "benchling-sqs-consumer",
268
+ logGroup: this.logGroup,
269
+ }),
270
+ environment: environmentVars,
271
+ });
272
+ }
254
273
  // Map container port
255
274
  container.addPortMappings({
256
275
  containerPort: 8080,
package/dist/lib/fargate-service.js.map CHANGED
@@ -1 +1 @@
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package/dist/lib/rest-api-gateway.d.ts.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"rest-api-gateway.d.ts","sourceRoot":"","sources":["../../lib/rest-api-gateway.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,UAAU,MAAM,4BAA4B,CAAC;AACzD,OAAO,KAAK,GAAG,MAAM,qBAAqB,CAAC;AAC3C,OAAO,KAAK,KAAK,MAAM,wCAAwC,CAAC;AAChE,OAAO,KAAK,IAAI,MAAM,sBAAsB,CAAC;AAE7C,OAAO,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AACvC,OAAO,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAC;AAEnD,MAAM,WAAW,mBAAmB;IAChC,QAAQ,CAAC,GAAG,EAAE,GAAG,CAAC,IAAI,CAAC;IACvB,QAAQ,CAAC,mBAAmB,EAAE,KAAK,CAAC,oBAAoB,CAAC;IACzD,QAAQ,CAAC,WAAW,EAAE,KAAK,CAAC,gBAAgB,CAAC;IAC7C,QAAQ,CAAC,oBAAoB,EAAE,GAAG,CAAC,cAAc,CAAC;IAClD,QAAQ,CAAC,MAAM,EAAE,WAAW,CAAC;IAC7B,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;CAC1B;AAED,qBAAa,cAAc;IACvB,SAAgB,GAAG,EAAE,UAAU,CAAC,OAAO,CAAC;IACxC,SAAgB,OAAO,EAAE,UAAU,CAAC,OAAO,CAAC;IAC5C,SAAgB,QAAQ,EAAE,IAAI,CAAC,SAAS,CAAC;IACzC,SAAgB,KAAK,EAAE,MAAM,CAAC;gBAElB,KAAK,EAAE,SAAS,EAAE,EAAE,EAAE,MAAM,EAAE,KAAK,EAAE,mBAAmB;CAwJvE"}
1
+ {"version":3,"file":"rest-api-gateway.d.ts","sourceRoot":"","sources":["../../lib/rest-api-gateway.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,UAAU,MAAM,4BAA4B,CAAC;AACzD,OAAO,KAAK,GAAG,MAAM,qBAAqB,CAAC;AAC3C,OAAO,KAAK,KAAK,MAAM,wCAAwC,CAAC;AAChE,OAAO,KAAK,IAAI,MAAM,sBAAsB,CAAC;AAE7C,OAAO,EAAE,SAAS,EAAE,MAAM,YAAY,CAAC;AACvC,OAAO,EAAE,WAAW,EAAE,MAAM,sBAAsB,CAAC;AAEnD,MAAM,WAAW,mBAAmB;IAChC,QAAQ,CAAC,GAAG,EAAE,GAAG,CAAC,IAAI,CAAC;IACvB,QAAQ,CAAC,mBAAmB,EAAE,KAAK,CAAC,oBAAoB,CAAC;IACzD,QAAQ,CAAC,WAAW,EAAE,KAAK,CAAC,gBAAgB,CAAC;IAC7C,QAAQ,CAAC,oBAAoB,EAAE,GAAG,CAAC,cAAc,CAAC;IAClD,QAAQ,CAAC,MAAM,EAAE,WAAW,CAAC;IAC7B,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;CAC1B;AAED,qBAAa,cAAc;IACvB,SAAgB,GAAG,EAAE,UAAU,CAAC,OAAO,CAAC;IACxC,SAAgB,OAAO,EAAE,UAAU,CAAC,OAAO,CAAC;IAC5C,SAAgB,QAAQ,EAAE,IAAI,CAAC,SAAS,CAAC;IACzC,SAAgB,KAAK,EAAE,MAAM,CAAC;gBAElB,KAAK,EAAE,SAAS,EAAE,EAAE,EAAE,MAAM,EAAE,KAAK,EAAE,mBAAmB;CAuJvE"}
package/dist/lib/rest-api-gateway.js CHANGED
@@ -71,14 +71,13 @@ class RestApiGateway {
71
71
  .map(ip => ip.trim())
72
72
  .filter(ip => ip.length > 0);
73
73
  // Build resource policy document with IP filtering.
74
- // The broad public/IP-scoped allow must exclude POST /package-event
75
- // because that endpoint is reserved for EventBridge and does not use
76
- // Benchling HMAC verification.
74
+ // All public API paths are subject to the same policy; the old
75
+ // package-event carve-out was removed when EventBridge moved to SQS.
77
76
  const policyStatements = [];
78
77
  const publicInvokePolicy = {
79
78
  principals: [new iam.AnyPrincipal()],
80
79
  actions: ["execute-api:Invoke"],
81
- notResources: ["execute-api:/*/POST/package-event"],
80
+ resources: ["execute-api:/*"],
82
81
  };
83
82
  if (allowedIps.length === 0) {
84
83
  // No IP filtering - allow all requests from anywhere
@@ -87,7 +86,7 @@ class RestApiGateway {
87
86
  ...publicInvokePolicy,
88
87
  }));
89
88
  console.log("Resource Policy IP filtering: DISABLED (no webhookAllowList configured)");
90
- console.log("All endpoints except /package-event accessible from any IP");
89
+ console.log("All endpoints accessible from any IP");
91
90
  }
92
91
  else {
93
92
  // IP filtering enabled - single statement for ALL endpoints
@@ -102,7 +101,7 @@ class RestApiGateway {
102
101
  }));
103
102
  console.log("Resource Policy IP filtering: ENABLED");
104
103
  console.log(`Allowed IPs: ${allowedIps.join(", ")}`);
105
- console.log("IP filtering applies to all public endpoints except /package-event");
104
+ console.log("IP filtering applies to all public endpoints");
106
105
  }
107
106
  const policyDoc = new iam.PolicyDocument({
108
107
  statements: policyStatements,
package/dist/lib/rest-api-gateway.js.map CHANGED
@@ -1 +1 @@
1
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package/dist/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@quiltdata/benchling-webhook",
3
- "version": "0.16.0",
3
+ "version": "0.17.0-20260414T022608Z",
4
4
  "description": "AWS CDK deployment for Benchling webhook processing using Fargate - Deploy directly with npx",
5
5
  "main": "dist/lib/index.js",
6
6
  "types": "dist/lib/index.d.ts",
@@ -115,7 +115,7 @@
115
115
  "adm-zip": "^0.5.10",
116
116
  "ajv": "^8.17.1",
117
117
  "ajv-formats": "^3.0.1",
118
- "aws-cdk-lib": "2.248.0",
118
+ "aws-cdk-lib": "2.249.0",
119
119
  "boxen": "^8.0.0",
120
120
  "chalk": "^5.0.0",
121
121
  "commander": "^14.0.2",
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@quiltdata/benchling-webhook",
3
- "version": "0.16.0",
3
+ "version": "0.17.0-20260414T022608Z",
4
4
  "description": "AWS CDK deployment for Benchling webhook processing using Fargate - Deploy directly with npx",
5
5
  "main": "dist/lib/index.js",
6
6
  "types": "dist/lib/index.d.ts",
@@ -115,7 +115,7 @@
115
115
  "adm-zip": "^0.5.10",
116
116
  "ajv": "^8.17.1",
117
117
  "ajv-formats": "^3.0.1",
118
- "aws-cdk-lib": "2.248.0",
118
+ "aws-cdk-lib": "2.249.0",
119
119
  "boxen": "^8.0.0",
120
120
  "chalk": "^5.0.0",
121
121
  "commander": "^14.0.2",