@quiltdata/benchling-webhook 0.11.0 → 0.11.2

package/dist/bin/commands/setup-wizard.js

@@ -1,25 +1,56 @@
 #!/usr/bin/env node
 "use strict";
 /**
- * Interactive Configuration Wizard (v0.8.0)
+ * Interactive Configuration Wizard (v0.10.0)
  *
- * Phase-based modular setup wizard that orchestrates:
+ * Unified setup wizard that orchestrates:
  * 1. Catalog discovery and confirmation
  * 2. Stack query for infrastructure details
- * 3. Parameter collection from user
- * 4. Configuration validation
- * 5. Deployment mode decision (integrated vs standalone)
- * 6. Mode-specific setup (integrated or standalone)
+ * 3. Context display and flow decision
+ * 4. Parameter collection (only when needed)
+ * 5. Execution (update secrets, enable/disable integration, deploy)
  *
  * Architecture:
- * - Each phase is a separate, testable module
- * - Explicit data flow between phases via TypeScript types
- * - Cannot skip phases or execute out of order
- * - Integrated mode has explicit return (no deployment)
+ * - Context first, then targeted questions
+ * - Parameter collection is deferred until required
+ * - Integrated and standalone paths share execution helpers
  *
  * @module commands/setup-wizard
- * @version 0.8.0
+ * @version 0.10.0
  */
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
@@ -36,9 +67,13 @@ const phase1_catalog_discovery_1 = require("../../lib/wizard/phase1-catalog-disc
 const phase2_stack_query_1 = require("../../lib/wizard/phase2-stack-query");
 const phase3_parameter_collection_1 = require("../../lib/wizard/phase3-parameter-collection");
 const phase4_validation_1 = require("../../lib/wizard/phase4-validation");
-const phase5_mode_decision_1 = require("../../lib/wizard/phase5-mode-decision");
-const phase6_integrated_mode_1 = require("../../lib/wizard/phase6-integrated-mode");
-const phase7_standalone_mode_1 = require("../../lib/wizard/phase7-standalone-mode");
+const phase5_unified_flow_1 = require("../../lib/wizard/phase5-unified-flow");
+const profile_config_builder_1 = require("../../lib/wizard/profile-config-builder");
+const stack_waiter_1 = require("../../lib/wizard/stack-waiter");
+const sync_secrets_1 = require("./sync-secrets");
+const deploy_1 = require("./deploy");
+const config_1 = require("../../lib/types/config");
+const stack_parameter_update_1 = require("../../lib/utils/stack-parameter-update");
 /**
  * Step titles for the wizard phases
  * This is the single source of truth for step numbering and titles
@@ -46,11 +81,10 @@ const phase7_standalone_mode_1 = require("../../lib/wizard/phase7-standalone-mod
 const STEP_TITLES = {
     catalogDiscovery: "Quilt Catalog Discovery",
     stackQuery: "Quilt Stack Configuration",
-    parameterCollection: "Configuration Parameters",
+    flowDecision: "Context & Flow Selection",
+    parameterCollection: "Benchling Parameters",
     validation: "Validation",
-    modeDecision: "Deployment Mode",
-    integratedMode: "Integrated Setup",
-    standaloneMode: "Standalone Setup",
+    execution: "Execution",
 };
 /**
  * Gets the package version from package.json
@@ -72,9 +106,9 @@ function printWelcomeBanner() {
     const version = getVersion();
     const prefix = "   Benchling Webhook Setup (v";
     const suffix = ")";
-    const totalWidth = 63; // Width between the ║ symbols
+    const totalWidth = 59; // Width between the ║ symbols (border is 61 chars total - 2 for ║║)
     const contentLength = prefix.length + version.length + suffix.length;
-    const padding = " ".repeat(totalWidth - contentLength);
+    const padding = " ".repeat(Math.max(0, totalWidth - contentLength));
     console.log("\n╔═══════════════════════════════════════════════════════════╗");
     console.log(`║${prefix}${version}${suffix}${padding}║`);
     console.log("╚═══════════════════════════════════════════════════════════╝");
@@ -183,120 +217,392 @@ async function runSetupWizard(options = {}) {
         throw new Error("Stack query failed");
     }
     // =========================================================================
-    // PHASE 3: PARAMETER COLLECTION
+    // PHASE 3: CONTEXT + FLOW DECISION
     // =========================================================================
-    // Collect user inputs, using existing config and stack query results as defaults
-    printStepHeader(3, STEP_TITLES.parameterCollection);
-    const parameters = await (0, phase3_parameter_collection_1.runParameterCollection)({
+    printStepHeader(3, STEP_TITLES.flowDecision);
+    const flowDecision = await (0, phase5_unified_flow_1.runUnifiedFlowDecision)({
         stackQuery,
         existingConfig,
-        yes,
+        configStorage: xdg,
         profile,
-        benchlingTenant: options.benchlingTenant,
-        benchlingClientId: options.benchlingClientId,
-        benchlingClientSecret: options.benchlingClientSecret,
-        benchlingAppDefinitionId: options.benchlingAppDefinitionId,
-        userBucket: options.userBucket,
-        pkgPrefix: options.pkgPrefix,
-        pkgKey: options.pkgKey,
-        logLevel: options.logLevel,
-        webhookAllowList: options.webhookAllowList,
+        yes,
+        awsProfile,
     });
-    // =========================================================================
-    // PHASE 4: VALIDATION
-    // =========================================================================
-    // Validate all collected parameters BEFORE making mode decision
-    if (!skipValidation) {
-        printStepHeader(4, STEP_TITLES.validation);
-        const validation = await (0, phase4_validation_1.runValidation)({
+    if (flowDecision.action === "exit") {
+        console.log(chalk_1.default.green("✓ Exit without changes"));
+        if (existingConfig) {
+            return {
+                success: true,
+                profile,
+                config: existingConfig,
+                deploymentHandled: true,
+            };
+        }
+        process.exit(0);
+    }
+    const actionsRequiringParameters = new Set([
+        "update-integration-secret",
+        "enable-integration",
+        "deploy-standalone",
+        "update-standalone-redeploy",
+    ]);
+    let parameters = undefined;
+    const collectParameters = async () => {
+        printStepHeader(4, STEP_TITLES.parameterCollection);
+        parameters = await (0, phase3_parameter_collection_1.runParameterCollection)({
             stackQuery,
-            parameters,
-            awsProfile,
+            existingConfig,
+            yes,
+            profile,
+            benchlingTenant: options.benchlingTenant,
+            benchlingClientId: options.benchlingClientId,
+            benchlingClientSecret: options.benchlingClientSecret,
+            benchlingAppDefinitionId: options.benchlingAppDefinitionId,
+            userBucket: options.userBucket,
+            pkgPrefix: options.pkgPrefix,
+            pkgKey: options.pkgKey,
+            logLevel: options.logLevel,
+            webhookAllowList: options.webhookAllowList,
         });
-        if (!validation.success) {
-            if (yes) {
-                throw new Error(`Validation failed: ${validation.errors.join(", ")}`);
+        if (!skipValidation) {
+            printStepHeader(5, STEP_TITLES.validation);
+            const validation = await (0, phase4_validation_1.runValidation)({
+                stackQuery,
+                parameters,
+                awsProfile,
+            });
+            if (!validation.success) {
+                if (yes) {
+                    throw new Error(`Validation failed: ${validation.errors.join(", ")}`);
+                }
+                const { proceed } = await inquirer_1.default.prompt([
+                    {
+                        type: "confirm",
+                        name: "proceed",
+                        message: "Save configuration anyway?",
+                        default: false,
+                    },
+                ]);
+                if (!proceed) {
+                    throw new Error("Setup aborted by user");
+                }
             }
-            const { proceed } = await inquirer_1.default.prompt([
+        }
+    };
+    if (actionsRequiringParameters.has(flowDecision.action)) {
+        await collectParameters();
+    }
+    const saveConfig = (config) => {
+        console.log(`Saving configuration to profile: ${profile}...\n`);
+        xdg.writeProfile(profile, config);
+        console.log(chalk_1.default.green(`✓ Configuration saved to: ~/.config/benchling-webhook/${profile}/config.json\n`));
+    };
+    const requireConfig = async (integratedStack) => {
+        try {
+            return (0, profile_config_builder_1.buildProfileConfigFromExisting)({
+                stackQuery,
+                existingConfig,
+                secretDetails: flowDecision.secretDetails,
+                catalogDns: catalogResult.catalogDns,
+                integratedStack,
+                benchlingSecretArn: flowDecision.benchlingSecretArn,
+            });
+        }
+        catch (_error) {
+            if (!parameters) {
+                await collectParameters();
+            }
+            return (0, profile_config_builder_1.buildProfileConfigFromParameters)({
+                stackQuery,
+                parameters: parameters,
+                catalogDns: catalogResult.catalogDns,
+                integratedStack,
+                benchlingSecretArn: flowDecision.benchlingSecretArn,
+            });
+        }
+    };
+    printStepHeader(6, STEP_TITLES.execution);
+    switch (flowDecision.action) {
+        case "update-integration-secret": {
+            const benchlingSecretArn = flowDecision.benchlingSecretArn;
+            if (!benchlingSecretArn) {
+                throw new Error("BenchlingSecret ARN not found for integrated update.");
+            }
+            const config = (0, profile_config_builder_1.buildProfileConfigFromParameters)({
+                stackQuery,
+                parameters: parameters,
+                catalogDns: catalogResult.catalogDns,
+                integratedStack: true,
+                benchlingSecretArn,
+            });
+            saveConfig(config);
+            // Clear deployment tracking for integrated mode (no separate deployments)
+            const deploymentsC = xdg.getDeployments(profile);
+            Object.keys(deploymentsC.active).forEach(stage => {
+                xdg.clearDeployment(profile, stage);
+            });
+            await (0, sync_secrets_1.syncSecretsToAWS)({
+                profile,
+                awsProfile,
+                region: config.deployment.region,
+                force: true,
+                configStorage: xdg,
+            });
+            // Show status with webhook URL
+            const { statusCommand } = await Promise.resolve().then(() => __importStar(require("./status")));
+            await statusCommand({
+                profile,
+                awsProfile,
+                configStorage: xdg,
+                // Use default timer - will auto-refresh during updates and exit when stable
+            });
+            break;
+        }
+        case "review-only": {
+            const integratedStack = flowDecision.flow !== "standalone-existing";
+            const config = await requireConfig(integratedStack);
+            saveConfig(config);
+            // Clear deployment tracking for integrated mode (no separate deployments)
+            if (integratedStack) {
+                const deployments = xdg.getDeployments(profile);
+                Object.keys(deployments.active).forEach(stage => {
+                    xdg.clearDeployment(profile, stage);
+                });
+                const { statusCommand } = await Promise.resolve().then(() => __importStar(require("./status")));
+                await statusCommand({
+                    profile,
+                    awsProfile,
+                    configStorage: xdg,
+                    // Use default timer - will auto-refresh during updates and exit when stable
+                });
+            }
+            break;
+        }
+        case "disable-integration": {
+            // User already confirmed in Phase 5 - proceed with disabling
+            console.log(chalk_1.default.dim("Disabling integrated webhook..."));
+            const updateResult = await (0, stack_parameter_update_1.updateStackParameter)({
+                stackArn: stackQuery.stackArn,
+                region: stackQuery.region,
+                parameterKey: config_1.CFN_PARAMS.BENCHLING_WEBHOOK,
+                parameterValue: "Disabled",
+                awsProfile,
+            });
+            if (updateResult.success) {
+                console.log(chalk_1.default.green("✓ Stack update initiated"));
+                await (0, stack_waiter_1.pollStackStatus)({
+                    stackArn: stackQuery.stackArn,
+                    region: stackQuery.region,
+                    awsProfile,
+                });
+            }
+            else {
+                throw new Error(updateResult.error || "Failed to disable BenchlingIntegration");
+            }
+            const config = await requireConfig(true);
+            saveConfig(config);
+            // Clear deployment tracking for integrated mode (no separate deployments)
+            const deploymentsToCleanup = xdg.getDeployments(profile);
+            Object.keys(deploymentsToCleanup.active).forEach(stage => {
+                xdg.clearDeployment(profile, stage);
+            });
+            break;
+        }
+        case "switch-standalone": {
+            const confirmSwitch = yes || (await inquirer_1.default.prompt([
                 {
                     type: "confirm",
-                    name: "proceed",
-                    message: "Save configuration anyway?",
+                    name: "confirmSwitch",
+                    message: "Create separate infrastructure? (~8-10 min)",
                     default: false,
                 },
-            ]);
-            if (!proceed) {
-                throw new Error("Setup aborted by user");
+            ])).confirmSwitch;
+            if (!confirmSwitch) {
+                console.log(chalk_1.default.green("✓ Exit without changes"));
+                return {
+                    success: true,
+                    profile,
+                    config: existingConfig || (await requireConfig(true)),
+                    deploymentHandled: true,
+                };
             }
+            const updateResult = await (0, stack_parameter_update_1.updateStackParameter)({
+                stackArn: stackQuery.stackArn,
+                region: stackQuery.region,
+                parameterKey: config_1.CFN_PARAMS.BENCHLING_WEBHOOK,
+                parameterValue: "Disabled",
+                awsProfile,
+            });
+            if (updateResult.success) {
+                console.log(chalk_1.default.green("✓ Stack update initiated"));
+                await (0, stack_waiter_1.pollStackStatus)({
+                    stackArn: stackQuery.stackArn,
+                    region: stackQuery.region,
+                    awsProfile,
+                });
+            }
+            else {
+                throw new Error(updateResult.error || "Failed to disable BenchlingIntegration");
+            }
+            const config = await requireConfig(false);
+            saveConfig(config);
+            await (0, sync_secrets_1.syncSecretsToAWS)({
+                profile,
+                awsProfile,
+                region: config.deployment.region,
+                force: true,
+                configStorage: xdg,
+            });
+            if (!setupOnly) {
+                await (0, deploy_1.deployCommand)({
+                    profile,
+                    stage: profile === "prod" ? "prod" : "dev",
+                    yes: true,
+                });
+            }
+            break;
         }
+        case "enable-integration": {
+            const confirmEnable = yes || (await inquirer_1.default.prompt([
+                {
+                    type: "confirm",
+                    name: "confirmEnable",
+                    message: "Enable integration?",
+                    default: true,
+                },
+            ])).confirmEnable;
+            if (!confirmEnable) {
+                console.log(chalk_1.default.green("✓ Exit without changes"));
+                return {
+                    success: true,
+                    profile,
+                    config: existingConfig || (await requireConfig(true)),
+                    deploymentHandled: true,
+                };
+            }
+            const updateResult = await (0, stack_parameter_update_1.updateStackParameter)({
+                stackArn: stackQuery.stackArn,
+                region: stackQuery.region,
+                parameterKey: config_1.CFN_PARAMS.BENCHLING_WEBHOOK,
+                parameterValue: "Enabled",
+                awsProfile,
+            });
+            if (updateResult.success) {
+                console.log(chalk_1.default.green("✓ Stack update initiated"));
+                await (0, stack_waiter_1.pollStackStatus)({
+                    stackArn: stackQuery.stackArn,
+                    region: stackQuery.region,
+                    awsProfile,
+                });
+            }
+            else {
+                throw new Error(updateResult.error || "Failed to enable BenchlingIntegration");
+            }
+            const benchlingSecretArn = await (0, stack_waiter_1.waitForBenchlingSecretArn)({
+                stackArn: stackQuery.stackArn,
+                region: stackQuery.region,
+                awsProfile,
+            });
+            const config = (0, profile_config_builder_1.buildProfileConfigFromParameters)({
+                stackQuery,
+                parameters: parameters,
+                catalogDns: catalogResult.catalogDns,
+                integratedStack: true,
+                benchlingSecretArn,
+            });
+            saveConfig(config);
+            // Clear deployment tracking for integrated mode (no separate deployments)
+            const deploymentsB = xdg.getDeployments(profile);
+            Object.keys(deploymentsB.active).forEach(stage => {
+                xdg.clearDeployment(profile, stage);
+            });
+            await (0, sync_secrets_1.syncSecretsToAWS)({
+                profile,
+                awsProfile,
+                region: config.deployment.region,
+                force: true,
+                configStorage: xdg,
+            });
+            // Show status with webhook URL
+            const { statusCommand } = await Promise.resolve().then(() => __importStar(require("./status")));
+            await statusCommand({
+                profile,
+                awsProfile,
+                configStorage: xdg,
+                // Use default timer - will auto-refresh during updates and exit when stable
+            });
+            break;
+        }
+        case "deploy-standalone": {
+            const config = (0, profile_config_builder_1.buildProfileConfigFromParameters)({
+                stackQuery,
+                parameters: parameters,
+                catalogDns: catalogResult.catalogDns,
+                integratedStack: false,
+            });
+            saveConfig(config);
+            await (0, sync_secrets_1.syncSecretsToAWS)({
+                profile,
+                awsProfile,
+                region: config.deployment.region,
+                force: true,
+                configStorage: xdg,
+            });
+            if (!setupOnly) {
+                await (0, deploy_1.deployCommand)({
+                    profile,
+                    stage: profile === "prod" ? "prod" : "dev",
+                    yes: true,
+                });
+            }
+            break;
+        }
+        case "update-standalone-redeploy": {
+            const config = (0, profile_config_builder_1.buildProfileConfigFromParameters)({
+                stackQuery,
+                parameters: parameters,
+                catalogDns: catalogResult.catalogDns,
+                integratedStack: false,
+            });
+            saveConfig(config);
+            if (!setupOnly) {
+                await (0, deploy_1.deployCommand)({
+                    profile,
+                    stage: profile === "prod" ? "prod" : "dev",
+                    yes: true,
+                });
+            }
+            await (0, sync_secrets_1.syncSecretsToAWS)({
+                profile,
+                awsProfile,
+                region: config.deployment.region,
+                force: true,
+                configStorage: xdg,
+            });
+            break;
+        }
+        case "update-standalone-secret": {
+            const config = await requireConfig(false);
+            saveConfig(config);
+            await (0, sync_secrets_1.syncSecretsToAWS)({
+                profile,
+                awsProfile,
+                region: config.deployment.region,
+                force: true,
+                configStorage: xdg,
+            });
+            break;
+        }
+        default:
+            break;
     }
-    // =========================================================================
-    // PHASE 5: MODE DECISION
-    // =========================================================================
-    // Decide between integrated mode (use existing BenchlingSecret) or
-    // standalone mode (create new dedicated secret)
-    printStepHeader(5, STEP_TITLES.modeDecision);
-    const modeDecision = await (0, phase5_mode_decision_1.runModeDecision)({
-        stackQuery,
-        yes,
-    });
-    // =========================================================================
-    // PHASE 6 OR 7: MODE-SPECIFIC EXECUTION
-    // =========================================================================
-    if (modeDecision.mode === "integrated") {
-        // =====================================================================
-        // PHASE 6: INTEGRATED MODE
-        // =====================================================================
-        // Update existing BenchlingSecret in Quilt stack
-        // NO deployment - Quilt stack handles webhook
-        // MUST return here to prevent fall-through
-        printStepHeader(6, STEP_TITLES.integratedMode);
-        await (0, phase6_integrated_mode_1.runIntegratedMode)({
-            profile,
-            catalogDns: catalogResult.catalogDns,
-            stackQuery,
-            parameters,
-            benchlingSecretArn: modeDecision.benchlingSecretArn,
-            configStorage: xdg,
-            awsProfile,
-            yes,
-        });
-        // CRITICAL: Explicit return for integrated mode
-        // Cannot fall through to deployment
-        const finalConfig = xdg.readProfile(profile);
-        return {
-            success: true,
-            profile,
-            config: finalConfig,
-            deploymentHandled: true, // Integrated mode completes in phase 6, no deployment needed
-        };
-    }
-    else {
-        // =====================================================================
-        // PHASE 7: STANDALONE MODE
-        // =====================================================================
-        // Create new dedicated secret
-        // Optionally deploy as separate stack
-        printStepHeader(6, STEP_TITLES.standaloneMode);
-        const standaloneResult = await (0, phase7_standalone_mode_1.runStandaloneMode)({
-            profile,
-            catalogDns: catalogResult.catalogDns,
-            stackQuery,
-            parameters,
-            configStorage: xdg,
-            yes,
-            setupOnly,
-            awsProfile,
-        });
-        // CRITICAL: Explicit return for standalone mode
-        const finalConfig = xdg.readProfile(profile);
-        return {
-            success: true,
-            profile,
-            config: finalConfig,
-            deploymentHandled: standaloneResult.deploymentHandled,
-        };
-    }
+    const finalConfig = xdg.readProfile(profile);
+    return {
+        success: true,
+        profile,
+        config: finalConfig,
+        deploymentHandled: true,
+    };
 }
 /**
  * Setup wizard command handler

package/dist/bin/commands/setup-wizard.js.map

@@ -1 +1 @@
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package/dist/bin/commands/status.d.ts

@@ -30,6 +30,7 @@ export interface StatusResult {
     stackArn?: string;
     region?: string;
     error?: string;
+    athenaWorkgroup?: string;
     stackOutputs?: {
         webhookEndpoint?: string;
         benchlingUrl?: string;