@quereus/isolation 0.2.3 → 1.0.0

package/README.md

@@ -191,8 +191,9 @@ console.log(caps.persistent); // (from underlying module)
 The isolation layer adds minimal overhead:
 
 - **Fast path** — No overlay merging if no writes have occurred
-- **Point lookups** — O(log n) overlay check + underlying lookup
+- **Point lookups** — O(log n) via PK index seek on the overlay
 - **Range scans** — Streaming merge of sorted results
+- **Commit flush** — O(log n) per-row existence check against the underlying table
 
 For performance-critical applications, consider:
 - Using memory overlay for small transactions

package/dist/src/isolated-table.d.ts

@@ -21,6 +21,12 @@ export declare class IsolatedTable extends VirtualTable implements IsolatedTable
     private readonly isolationModule;
     private readonly underlyingTable;
     private registeredConnection;
+    /**
+     * Tracks savepoint depths that were created before the overlay existed.
+     * When rolling back to one of these savepoints, the overlay is cleared
+     * entirely (restoring the "no uncommitted changes" state).
+     */
+    private savepointsBeforeOverlay;
     constructor(db: Database, module: IsolationModule, underlyingTable: VirtualTable);
     /**
      * Gets the tombstone column name from the module.
@@ -81,13 +87,25 @@ export declare class IsolatedTable extends VirtualTable implements IsolatedTable
     /**
      * Performs merged query combining overlay and underlying data.
      *
-     * Both overlay and underlying are queried with the same FilterInfo (for the overlay,
-     * adjusted for its schema with tombstone column). Both streams return rows in the
-     * same order (by PK for primary scans, by index key for secondary index scans).
+     * For primary key scans: uses position-based merge since both streams share
+     * the same sort order and overlay entries align with underlying rows by PK.
      *
-     * The merge iterator combines them using the appropriate sort key comparator.
+     * For secondary index scans: uses PK-exclusion approach because overlay entries
+     * may have different index key values than the underlying rows they shadow
+     * (tombstones have null non-PK columns; updates may change the indexed column).
      */
     private mergedQuery;
+    /**
+     * Merged query strategy for secondary index scans.
+     *
+     * Instead of position-based merging (which fails when overlay entries have
+     * different index key values than the underlying rows they shadow), this:
+     * 1. Collects all PKs modified in the overlay (full scan)
+     * 2. Queries underlying via secondary index, excluding modified PKs
+     * 3. Queries overlay via secondary index for non-tombstone data rows
+     * 4. Merges the two disjoint, sorted streams by sort key
+     */
+    private mergedSecondaryIndexQuery;
     /**
      * Parses FilterInfo to determine which index is being used.
      * Returns null for full table scan or primary key scan, index name for secondary indexes.
@@ -151,20 +169,30 @@ export declare class IsolatedTable extends VirtualTable implements IsolatedTable
      */
     update(args: UpdateArgs): Promise<UpdateResult>;
     /**
-     * Checks if a row with the given primary key exists in the overlay.
+     * Strips the tombstone column from an overlay update result.
      */
-    private rowExistsInOverlay;
+    private stripTombstoneFromResult;
     /**
-     * Gets a row from the overlay by primary key.
+     * Gets a row from the overlay by primary key using O(log n) point lookup.
      */
     private getOverlayRow;
     /**
      * Creates a FilterInfo for a full table scan (no constraints).
      */
     private createFullScanFilterInfo;
+    /**
+     * Creates a FilterInfo for a primary key point lookup (equality on all PK columns).
+     * This produces O(log n) lookups instead of O(n) full scans.
+     */
+    private buildPKPointLookupFilter;
     begin(): Promise<void>;
     sync(): Promise<void>;
     commit(): Promise<void>;
+    /**
+     * Flushes overlay changes to underlying (if any) and discards the overlay.
+     * Shared by commit() and onConnectionCommit().
+     */
+    private flushAndClearOverlay;
     /**
      * Flushes all overlay changes to the underlying table.
      * Called during commit to persist changes.
@@ -176,11 +204,15 @@ export declare class IsolatedTable extends VirtualTable implements IsolatedTable
     private flushOverlayToUnderlying;
     /**
      * Checks if a row with the given primary key exists in the underlying table.
+     * Uses O(log n) point lookup via the PK index.
      */
     private rowExistsInUnderlying;
     rollback(): Promise<void>;
     /**
-     * Clears the connection-scoped overlay and resets state.
+     * Discards the connection-scoped overlay entirely.
+     * The overlay table is per-connection and ephemeral, so simply removing
+     * the reference allows GC to reclaim it. A fresh overlay will be created
+     * lazily via ensureOverlay() on the next write.
      */
     private clearOverlay;
     savepoint(index: number): Promise<void>;
@@ -207,6 +239,15 @@ export declare class IsolatedTable extends VirtualTable implements IsolatedTable
     onConnectionRollback(): Promise<void>;
     /**
      * Called by IsolatedConnection when a savepoint is created.
+     *
+     * When the overlay exists, its own registered MemoryVirtualTableConnection
+     * receives createSavepoint from the database's connection iteration.
+     * Calling overlayTable.savepoint() here too would double-push onto the
+     * same savepointStack, corrupting the depth-to-index mapping.
+     *
+     * When the overlay does NOT exist (savepoint before first write), we
+     * record the depth so that a later rollbackToSavepoint can clear the
+     * overlay if one was created after the savepoint.
      */
     onConnectionSavepoint(index: number): Promise<void>;
     /**
@@ -215,6 +256,10 @@ export declare class IsolatedTable extends VirtualTable implements IsolatedTable
     onConnectionReleaseSavepoint(index: number): Promise<void>;
     /**
      * Called by IsolatedConnection when rolling back to a savepoint.
+     *
+     * If the target savepoint was created before the overlay existed,
+     * the overlay's registered connection has no snapshot to restore —
+     * so we clear the overlay entirely, restoring "no uncommitted changes".
      */
     onConnectionRollbackToSavepoint(index: number): Promise<void>;
 }

package/dist/src/isolated-table.d.ts.map

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package/dist/src/isolated-table.js

@@ -1,4 +1,4 @@
-import { VirtualTable, compareSqlValues, isUpdateOk } from '@quereus/quereus';
+import { VirtualTable, compareSqlValues, isUpdateOk, IndexConstraintOp } from '@quereus/quereus';
 import { IsolatedConnection } from './isolated-connection.js';
 import { mergeStreams, createMergeEntry, createTombstone } from './merge-iterator.js';
 /**
@@ -20,6 +20,12 @@ export class IsolatedTable extends VirtualTable {
     isolationModule;
     underlyingTable;
     registeredConnection = null;
+    /**
+     * Tracks savepoint depths that were created before the overlay existed.
+     * When rolling back to one of these savepoints, the overlay is cleared
+     * entirely (restoring the "no uncommitted changes" state).
+     */
+    savepointsBeforeOverlay = new Set();
     constructor(db, module, underlyingTable) {
         // eslint-disable-next-line @typescript-eslint/no-explicit-any
         super(db, module, underlyingTable.schemaName, underlyingTable.tableName);
@@ -86,14 +92,12 @@ export class IsolatedTable extends VirtualTable {
         this.tableSchema = schema;
         // Create overlay schema with tombstone column
         const overlaySchema = this.isolationModule.createOverlaySchema(schema);
-        // Create the overlay table
+        // Create the overlay table.
+        // overlaySchema already contains indexes (copied from the base schema by
+        // createOverlaySchema), so the overlay's BaseLayer initialises all secondary
+        // indexes from the schema during construction.  No explicit createIndex loop
+        // is needed, and calling it would throw a "duplicate index" error.
         const overlayTable = await this.isolationModule.overlayModule.create(this.db, overlaySchema);
-        // Create indexes on overlay to match underlying
-        if (schema.indexes) {
-            for (const index of schema.indexes) {
-                await overlayTable.createIndex?.(index);
-            }
-        }
         // Store in connection-scoped storage
         const state = {
             overlayTable,
@@ -173,30 +177,91 @@ export class IsolatedTable extends VirtualTable {
     /**
      * Performs merged query combining overlay and underlying data.
      *
-     * Both overlay and underlying are queried with the same FilterInfo (for the overlay,
-     * adjusted for its schema with tombstone column). Both streams return rows in the
-     * same order (by PK for primary scans, by index key for secondary index scans).
+     * For primary key scans: uses position-based merge since both streams share
+     * the same sort order and overlay entries align with underlying rows by PK.
      *
-     * The merge iterator combines them using the appropriate sort key comparator.
+     * For secondary index scans: uses PK-exclusion approach because overlay entries
+     * may have different index key values than the underlying rows they shadow
+     * (tombstones have null non-PK columns; updates may change the indexed column).
      */
     async *mergedQuery(filterInfo) {
         const overlay = this.overlayTable;
         if (!overlay) {
-            // No overlay - just yield from underlying
             yield* this.underlyingTable.query(filterInfo);
             return;
         }
-        // Determine which index is being used
         const indexInfo = this.parseIndexFromFilterInfo(filterInfo);
-        // Query overlay with the same constraints (both streams in same order)
+        if (indexInfo.type === 'secondary') {
+            yield* this.mergedSecondaryIndexQuery(overlay, filterInfo, indexInfo);
+            return;
+        }
+        // Primary key scan - use standard sort-key merge
         const overlayFilterInfo = this.adaptFilterInfoForOverlay(filterInfo);
         const overlayStream = this.queryOverlayAsMergeEntries(overlay, overlayFilterInfo, indexInfo);
-        // Query underlying with original filterInfo
         const underlyingStream = this.underlyingTable.query(filterInfo);
-        // Build merge config with appropriate sort key functions
         const mergeConfig = this.buildMergeConfig(indexInfo);
         yield* mergeStreams(overlayStream, underlyingStream, mergeConfig);
     }
+    /**
+     * Merged query strategy for secondary index scans.
+     *
+     * Instead of position-based merging (which fails when overlay entries have
+     * different index key values than the underlying rows they shadow), this:
+     * 1. Collects all PKs modified in the overlay (full scan)
+     * 2. Queries underlying via secondary index, excluding modified PKs
+     * 3. Queries overlay via secondary index for non-tombstone data rows
+     * 4. Merges the two disjoint, sorted streams by sort key
+     */
+    async *mergedSecondaryIndexQuery(overlay, filterInfo, indexInfo) {
+        if (!overlay.query) {
+            yield* this.underlyingTable.query(filterInfo);
+            return;
+        }
+        const pkIndices = this.getPrimaryKeyIndices();
+        const tombstoneIndex = this.getTombstoneColumnIndex(overlay);
+        // Step 1: Collect all PKs modified in overlay (full scan)
+        const modifiedPKs = new Set();
+        for await (const row of overlay.query(this.createFullScanFilterInfo())) {
+            const pk = pkIndices.map(i => row[i]);
+            modifiedPKs.add(JSON.stringify(pk));
+        }
+        // Step 2: Query overlay via secondary index for non-tombstone data rows
+        const overlayFilterInfo = this.adaptFilterInfoForOverlay(filterInfo);
+        const overlayRows = [];
+        for await (const row of overlay.query(overlayFilterInfo)) {
+            if (row[tombstoneIndex] !== 1) {
+                overlayRows.push(row.slice(0, tombstoneIndex));
+            }
+        }
+        // Step 3: Query underlying via secondary index, filter out modified PKs
+        const mergeConfig = this.buildMergeConfig(indexInfo);
+        const compareSortKey = mergeConfig.compareSortKey ?? mergeConfig.comparePK;
+        const extractSortKey = mergeConfig.extractSortKey ?? mergeConfig.extractPK;
+        // Merge two sorted, disjoint streams
+        let oi = 0;
+        for await (const underlyingRow of this.underlyingTable.query(filterInfo)) {
+            const pk = pkIndices.map(i => underlyingRow[i]);
+            if (modifiedPKs.has(JSON.stringify(pk))) {
+                continue; // Skip rows modified in overlay
+            }
+            // Yield any overlay rows that sort before this underlying row
+            while (oi < overlayRows.length) {
+                const oKey = extractSortKey(overlayRows[oi]);
+                const uKey = extractSortKey(underlyingRow);
+                if (compareSortKey(oKey, uKey) <= 0) {
+                    yield overlayRows[oi++];
+                }
+                else {
+                    break;
+                }
+            }
+            yield underlyingRow;
+        }
+        // Yield remaining overlay rows
+        while (oi < overlayRows.length) {
+            yield overlayRows[oi++];
+        }
+    }
     /**
      * Parses FilterInfo to determine which index is being used.
      * Returns null for full table scan or primary key scan, index name for secondary indexes.
@@ -408,59 +473,63 @@ export class IsolatedTable extends VirtualTable {
         const tombstoneIndex = this.getTombstoneColumnIndex(overlay);
         switch (operation) {
             case 'insert': {
-                // Insert into overlay with tombstone = 0
-                const overlayRow = [...(values ?? []), 0]; // Append tombstone = 0
+                // Check if there's an existing tombstone in the overlay for this PK.
+                // This happens when a row is deleted then re-inserted with the same PK.
+                // In that case, convert the tombstone to a regular row (update) instead
+                // of inserting, which would fail with a UNIQUE constraint violation.
+                const pkIndices = this.getPrimaryKeyIndices();
+                const pk = values ? pkIndices.map(i => values[i]) : undefined;
+                if (pk) {
+                    const existingRow = await this.getOverlayRow(overlay, pk);
+                    if (existingRow && existingRow[tombstoneIndex] === 1) {
+                        // Convert tombstone to regular row
+                        const overlayRow = [...(values ?? []), 0];
+                        const result = await overlay.update({
+                            operation: 'update',
+                            values: overlayRow,
+                            oldKeyValues: pk,
+                            onConflict: args.onConflict,
+                        });
+                        return this.stripTombstoneFromResult(result, tombstoneIndex);
+                    }
+                }
+                // Normal insert into overlay with tombstone = 0
+                const overlayRow = [...(values ?? []), 0];
                 const result = await overlay.update({
                     ...args,
                     values: overlayRow,
                 });
-                // Strip tombstone from result
-                if (isUpdateOk(result) && result.row) {
-                    return { status: 'ok', row: result.row.slice(0, tombstoneIndex) };
-                }
-                return result;
+                return this.stripTombstoneFromResult(result, tombstoneIndex);
             }
             case 'update': {
                 // For updates, we need to handle the case where the row exists in:
                 // 1. Overlay only (previous insert) - update the overlay row
                 // 2. Underlying only - insert into overlay with new values
                 // 3. Both (previous update) - update the overlay row
-                // First, try to find in overlay
                 const pkIndices = this.getPrimaryKeyIndices();
                 const targetPK = oldKeyValues ?? (values ? pkIndices.map(i => values[i]) : undefined);
                 if (!targetPK || !values) {
                     throw new Error('UPDATE requires oldKeyValues or values with primary key');
                 }
-                // Check if row exists in overlay
-                const existsInOverlay = await this.rowExistsInOverlay(overlay, targetPK);
-                if (existsInOverlay) {
+                const existingOverlayRow = await this.getOverlayRow(overlay, targetPK);
+                const overlayRow = [...values, 0]; // tombstone = 0
+                if (existingOverlayRow) {
                     // Update existing overlay row
-                    const overlayRow = [...values, 0]; // tombstone = 0
-                    // oldKeyValues should only contain PK columns, not tombstone
                     const result = await overlay.update({
                         ...args,
                         values: overlayRow,
                         oldKeyValues: targetPK,
                     });
-                    // Strip tombstone from result
-                    if (isUpdateOk(result) && result.row) {
-                        return { status: 'ok', row: result.row.slice(0, tombstoneIndex) };
-                    }
-                    return result;
+                    return this.stripTombstoneFromResult(result, tombstoneIndex);
                 }
                 else {
                     // Insert new overlay row (shadows underlying)
-                    const overlayRow = [...values, 0];
                     const result = await overlay.update({
                         operation: 'insert',
                         values: overlayRow,
                         onConflict: args.onConflict,
                     });
-                    // Strip tombstone from result
-                    if (isUpdateOk(result) && result.row) {
-                        return { status: 'ok', row: result.row.slice(0, tombstoneIndex) };
-                    }
-                    return result;
+                    return this.stripTombstoneFromResult(result, tombstoneIndex);
                 }
             }
             case 'delete': {
@@ -470,27 +539,20 @@ export class IsolatedTable extends VirtualTable {
                 if (!targetPK) {
                     throw new Error('DELETE requires oldKeyValues or values with primary key');
                 }
-                // Check if row exists in overlay
-                const existsInOverlay = await this.rowExistsInOverlay(overlay, targetPK);
-                if (existsInOverlay) {
-                    // Check if it's already a tombstone
-                    const overlayRow = await this.getOverlayRow(overlay, targetPK);
-                    if (overlayRow) {
-                        const isTombstone = overlayRow[tombstoneIndex] === 1;
-                        if (isTombstone) {
-                            // Already deleted, nothing to do
-                            return { status: 'ok' };
-                        }
-                        // Convert to tombstone by updating the tombstone flag
-                        const tombstoneRow = [...overlayRow.slice(0, tombstoneIndex), 1];
-                        // oldKeyValues should only contain PK columns, not the full row
-                        await overlay.update({
-                            operation: 'update',
-                            values: tombstoneRow,
-                            oldKeyValues: targetPK,
-                            onConflict: args.onConflict,
-                        });
+                const existingOverlayRow = await this.getOverlayRow(overlay, targetPK);
+                if (existingOverlayRow) {
+                    if (existingOverlayRow[tombstoneIndex] === 1) {
+                        // Already deleted, nothing to do
+                        return { status: 'ok' };
                     }
+                    // Convert to tombstone by updating the tombstone flag
+                    const tombstoneRow = [...existingOverlayRow.slice(0, tombstoneIndex), 1];
+                    await overlay.update({
+                        operation: 'update',
+                        values: tombstoneRow,
+                        oldKeyValues: targetPK,
+                        onConflict: args.onConflict,
+                    });
                 }
                 else {
                     // Insert tombstone to shadow underlying row
@@ -516,27 +578,22 @@ export class IsolatedTable extends VirtualTable {
         }
     }
     /**
-     * Checks if a row with the given primary key exists in the overlay.
+     * Strips the tombstone column from an overlay update result.
      */
-    async rowExistsInOverlay(overlay, pk) {
-        const row = await this.getOverlayRow(overlay, pk);
-        return row !== undefined;
+    stripTombstoneFromResult(result, tombstoneIndex) {
+        if (isUpdateOk(result) && result.row) {
+            return { status: 'ok', row: result.row.slice(0, tombstoneIndex) };
+        }
+        return result;
     }
     /**
-     * Gets a row from the overlay by primary key.
+     * Gets a row from the overlay by primary key using O(log n) point lookup.
      */
     async getOverlayRow(overlay, pk) {
         if (!overlay.query)
             return undefined;
-        const pkIndices = this.getPrimaryKeyIndices();
-        const mergeConfig = this.buildMergeConfig();
-        // Scan overlay looking for matching PK
-        // This is inefficient but correct; optimization can use index later
-        for await (const row of overlay.query(this.createFullScanFilterInfo())) {
-            const rowPK = pkIndices.map(i => row[i]);
-            if (mergeConfig.comparePK(rowPK, pk) === 0) {
-                return row;
-            }
+        for await (const row of overlay.query(this.buildPKPointLookupFilter(pk))) {
+            return row;
         }
         return undefined;
     }
@@ -565,6 +622,37 @@ export class IsolatedTable extends VirtualTable {
             },
         };
     }
+    /**
+     * Creates a FilterInfo for a primary key point lookup (equality on all PK columns).
+     * This produces O(log n) lookups instead of O(n) full scans.
+     */
+    buildPKPointLookupFilter(pk) {
+        const pkIndices = this.getPrimaryKeyIndices();
+        const constraints = pkIndices.map((colIdx, i) => ({
+            constraint: { iColumn: colIdx, op: IndexConstraintOp.EQ, usable: true },
+            argvIndex: i + 1,
+        }));
+        return {
+            idxNum: 0,
+            idxStr: 'idx=_primary_(0);plan=2',
+            constraints,
+            args: pk,
+            indexInfoOutput: {
+                nConstraint: constraints.length,
+                aConstraint: constraints.map(c => c.constraint),
+                nOrderBy: 0,
+                aOrderBy: [],
+                colUsed: 0n,
+                aConstraintUsage: constraints.map(c => ({ argvIndex: c.argvIndex, omit: true })),
+                idxNum: 0,
+                idxStr: 'idx=_primary_(0);plan=2',
+                orderByConsumed: false,
+                estimatedCost: 1,
+                estimatedRows: 1n,
+                idxFlags: 0,
+            },
+        };
+    }
     // ==================== Transaction Lifecycle ====================
     async begin() {
         await this.underlyingTable.begin?.();
@@ -575,12 +663,19 @@ export class IsolatedTable extends VirtualTable {
         await this.overlayTable?.sync?.();
     }
     async commit() {
+        await this.flushAndClearOverlay();
+        await this.underlyingTable.commit?.();
+    }
+    /**
+     * Flushes overlay changes to underlying (if any) and discards the overlay.
+     * Shared by commit() and onConnectionCommit().
+     */
+    async flushAndClearOverlay() {
         const overlay = this.overlayTable;
         if (this.hasChanges && overlay) {
             await this.flushOverlayToUnderlying(overlay);
         }
-        await this.underlyingTable.commit?.();
-        await this.clearOverlay();
+        this.clearOverlay();
     }
     /**
      * Flushes all overlay changes to the underlying table.
@@ -647,65 +742,41 @@ export class IsolatedTable extends VirtualTable {
     }
     /**
      * Checks if a row with the given primary key exists in the underlying table.
+     * Uses O(log n) point lookup via the PK index.
      */
     async rowExistsInUnderlying(pk) {
         if (!this.underlyingTable.query)
             return false;
-        const pkIndices = this.getPrimaryKeyIndices();
-        const mergeConfig = this.buildMergeConfig();
-        for await (const row of this.underlyingTable.query(this.createFullScanFilterInfo())) {
-            const rowPK = pkIndices.map(i => row[i]);
-            if (mergeConfig.comparePK(rowPK, pk) === 0) {
-                return true;
-            }
+        for await (const _row of this.underlyingTable.query(this.buildPKPointLookupFilter(pk))) {
+            return true;
         }
         return false;
     }
     async rollback() {
         await this.underlyingTable.rollback?.();
-        await this.clearOverlay();
+        this.clearOverlay();
     }
     /**
-     * Clears the connection-scoped overlay and resets state.
+     * Discards the connection-scoped overlay entirely.
+     * The overlay table is per-connection and ephemeral, so simply removing
+     * the reference allows GC to reclaim it. A fresh overlay will be created
+     * lazily via ensureOverlay() on the next write.
      */
-    async clearOverlay() {
-        const state = this.getOverlayState();
-        if (!state)
-            return;
-        const overlay = state.overlayTable;
-        if (overlay.query) {
-            const pkIndices = this.getPrimaryKeyIndices();
-            // Collect all PKs first to avoid modifying while iterating
-            const pksToDelete = [];
-            for await (const row of overlay.query(this.createFullScanFilterInfo())) {
-                // Extract just the PK values (same columns as underlying table)
-                const pk = pkIndices.map(i => row[i]);
-                pksToDelete.push(pk);
-            }
-            // Delete each row from overlay by PK
-            for (const pk of pksToDelete) {
-                await overlay.update({
-                    operation: 'delete',
-                    values: undefined,
-                    oldKeyValues: pk,
-                });
-            }
-        }
-        // Clear the connection overlay state
+    clearOverlay() {
         this.isolationModule.clearConnectionOverlay(this.db, this.schemaName, this.tableName);
     }
     // ==================== Savepoints ====================
+    // Overlay savepoints are managed by IsolatedConnection (which forwards
+    // to the overlay's own registered connection). The table-level methods
+    // only forward to the underlying table to avoid double-savepointing.
     async savepoint(index) {
         await this.underlyingTable.savepoint?.(index);
-        await this.overlayTable?.savepoint?.(index);
     }
     async release(index) {
         await this.underlyingTable.release?.(index);
-        await this.overlayTable?.release?.(index);
     }
     async rollbackTo(index) {
         await this.underlyingTable.rollbackTo?.(index);
-        await this.overlayTable?.rollbackTo?.(index);
     }
     // ==================== Schema Operations ====================
     async disconnect() {
@@ -770,36 +841,61 @@ export class IsolatedTable extends VirtualTable {
      * Flushes overlay to underlying and clears overlay.
      */
     async onConnectionCommit() {
-        const overlay = this.overlayTable;
-        if (this.hasChanges && overlay) {
-            await this.flushOverlayToUnderlying(overlay);
-        }
-        await this.clearOverlay();
+        await this.flushAndClearOverlay();
+        this.savepointsBeforeOverlay.clear();
     }
     /**
      * Called by IsolatedConnection when the database rolls back.
      * Clears overlay without flushing.
      */
     async onConnectionRollback() {
-        await this.clearOverlay();
+        this.clearOverlay();
+        this.savepointsBeforeOverlay.clear();
     }
     /**
      * Called by IsolatedConnection when a savepoint is created.
+     *
+     * When the overlay exists, its own registered MemoryVirtualTableConnection
+     * receives createSavepoint from the database's connection iteration.
+     * Calling overlayTable.savepoint() here too would double-push onto the
+     * same savepointStack, corrupting the depth-to-index mapping.
+     *
+     * When the overlay does NOT exist (savepoint before first write), we
+     * record the depth so that a later rollbackToSavepoint can clear the
+     * overlay if one was created after the savepoint.
      */
     async onConnectionSavepoint(index) {
-        await this.overlayTable?.savepoint?.(index);
+        if (!this.overlayTable) {
+            this.savepointsBeforeOverlay.add(index);
+        }
+        // If overlay exists, its registered connection handles it
     }
     /**
      * Called by IsolatedConnection when a savepoint is released.
      */
     async onConnectionReleaseSavepoint(index) {
-        await this.overlayTable?.release?.(index);
+        this.savepointsBeforeOverlay.delete(index);
+        // If overlay exists, its registered connection handles it
     }
     /**
      * Called by IsolatedConnection when rolling back to a savepoint.
+     *
+     * If the target savepoint was created before the overlay existed,
+     * the overlay's registered connection has no snapshot to restore —
+     * so we clear the overlay entirely, restoring "no uncommitted changes".
      */
     async onConnectionRollbackToSavepoint(index) {
-        await this.overlayTable?.rollbackTo?.(index);
+        if (this.savepointsBeforeOverlay.has(index)) {
+            // Rolling back to before the overlay existed — discard all overlay changes
+            this.clearOverlay();
+            // Remove savepoints above the target (they're implicitly gone)
+            for (const depth of [...this.savepointsBeforeOverlay]) {
+                if (depth > index) {
+                    this.savepointsBeforeOverlay.delete(depth);
+                }
+            }
+        }
+        // If overlay's registered connection has this savepoint, it handles rollback
     }
 }
 //# sourceMappingURL=isolated-table.js.map

package/dist/src/isolated-table.js.map

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package/dist/src/isolation-module.d.ts

@@ -121,6 +121,10 @@ export declare class IsolationModule implements VirtualTableModule<IsolatedTable
      *
      * Note: Indexes on per-connection overlays are created lazily when the
      * overlay is created, by copying from the underlying table's schema.
+     *
+     * We use the stored table instance's createIndex() rather than the module-level
+     * method so that the MemoryTable's local tableSchema property stays in sync.
+     * That property is what ensureOverlay() reads when building the overlay schema.
      */
     createIndex(db: Database, schemaName: string, tableName: string, indexSchema: IndexSchema): Promise<void>;
     /**

package/dist/src/isolation-module.d.ts.map

@@ -1 +1 @@
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package/dist/src/isolation-module.js

@@ -186,10 +186,18 @@ export class IsolationModule {
      *
      * Note: Indexes on per-connection overlays are created lazily when the
      * overlay is created, by copying from the underlying table's schema.
+     *
+     * We use the stored table instance's createIndex() rather than the module-level
+     * method so that the MemoryTable's local tableSchema property stays in sync.
+     * That property is what ensureOverlay() reads when building the overlay schema.
      */
     async createIndex(db, schemaName, tableName, indexSchema) {
-        // Create on underlying only - overlays copy indexes when created lazily
-        if (this.underlying.createIndex) {
+        const state = this.getUnderlyingState(schemaName, tableName);
+        if (state?.underlyingTable.createIndex) {
+            // Instance-level createIndex keeps MemoryTable.tableSchema fresh
+            await state.underlyingTable.createIndex(indexSchema);
+        }
+        else if (this.underlying.createIndex) {
             await this.underlying.createIndex(db, schemaName, tableName, indexSchema);
         }
     }

package/dist/src/isolation-module.js.map

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package/dist/src/isolation-types.d.ts

@@ -1,4 +1,4 @@
-import type { VirtualTableModule, VirtualTable } from '@quereus/quereus';
+import type { VirtualTableModule } from '@quereus/quereus';
 /**
  * Configuration for creating an isolation-wrapped module.
  */
@@ -18,17 +18,4 @@ export interface IsolationModuleConfig {
      */
     tombstoneColumn?: string;
 }
-/**
- * Internal state for an isolated table instance.
- */
-export interface IsolatedTableState {
-    /** The wrapped underlying table */
-    underlyingTable: VirtualTable;
-    /** The overlay table storing uncommitted changes */
-    overlayTable: VirtualTable;
-    /** Whether there are any pending changes in the overlay */
-    hasChanges: boolean;
-    /** Current savepoint depth */
-    savepointDepth: number;
-}
 //# sourceMappingURL=isolation-types.d.ts.map

package/dist/src/isolation-types.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"isolation-types.d.ts","sourceRoot":"","sources":["../../src/isolation-types.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,kBAAkB,CAAC;AAE3D;;GAEG;AACH,MAAM,WAAW,qBAAqB;IACrC;;OAEG;IACH,UAAU,EAAE,kBAAkB,CAAC,GAAG,EAAE,GAAG,CAAC,CAAC;IAEzC;;;OAGG;IACH,OAAO,CAAC,EAAE,kBAAkB,CAAC,GAAG,EAAE,GAAG,CAAC,CAAC;IAEvC;;;OAGG;IACH,eAAe,CAAC,EAAE,MAAM,CAAC;CACzB"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@quereus/isolation",
-  "version": "0.2.3",
+  "version": "1.0.0",
   "type": "module",
   "description": "Generic transaction isolation layer for Quereus virtual table modules",
   "keywords": [
@@ -40,7 +40,7 @@
     "test:single": "cd ../.. && node --import ./packages/quereus-isolation/register.mjs node_modules/mocha/bin/mocha.js --bail"
   },
   "peerDependencies": {
-    "@quereus/quereus": "^0.16.2"
+    "@quereus/quereus": "^1.0.0"
   },
   "devDependencies": {
     "@quereus/quereus": "*",