@promptci/core 0.0.1 → 0.2.0

package/dist/stale-instructions.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"stale-instructions.d.ts","sourceRoot":"","sources":["../src/stale-instructions.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;GAUG;AAGH,OAAO,KAAK,EAAE,eAAe,EAAsB,aAAa,EAAE,MAAM,YAAY,CAAC;AAqMrF;;;;;GAKG;AACH,wBAAgB,uBAAuB,CAAC,KAAK,EAAE,eAAe,EAAE,GAAG,aAAa,EAAE,CAwFjF"}
+{"version":3,"file":"stale-instructions.d.ts","sourceRoot":"","sources":["../src/stale-instructions.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAGH,OAAO,KAAK,EAAE,eAAe,EAAsB,aAAa,EAAE,MAAM,YAAY,CAAC;AAoBrF,oEAAoE;AACpE,wBAAgB,WAAW,CAAC,GAAG,GAAE,IAAiB,GAAG,MAAM,CAE1D;AAqKD;;;;;GAKG;AACH,wBAAgB,uBAAuB,CAAC,KAAK,EAAE,eAAe,EAAE,GAAG,aAAa,EAAE,CAgGjF"}

package/dist/stale-instructions.js

@@ -2,7 +2,8 @@
  * Stale-instruction detector for PromptCI.
  *
  * Flags sections that likely reference outdated content:
- *   - Years 2019–2023 that appear outside code blocks
+ *   - Recent-but-past years that appear outside code blocks (rolling window,
+ *     see STALE_YEAR_WINDOW below)
  *   - Cleanup keywords: "TODO remove", "remove later", "temporary fix", "workaround"
  *   - "deprecated" near a version number or tool name
  *   - Known old framework versions (React 16, Next.js 9, Unity 2019, etc.)
@@ -10,14 +11,47 @@
  * Findings are heuristic — wording is intentionally cautious.
  */
 import * as crypto from 'node:crypto';
+import { stripCodeBlocks } from './markdown-fences.js';
+import { snippet } from './evidence.js';
+import { sectionIdPath } from './finding-id.js';
 // ─── Pattern definitions ──────────────────────────────────────────────────────
+/**
+ * BUG-14: the stale-year window is derived from the current date rather than
+ * hardcoded. The previous literal alternation (2019…2025) was correct only for
+ * calendar 2026 and silently stopped flagging last year's dates every Jan 1.
+ *
+ * How far back the window reaches. In year Y the detector flags
+ * Y-STALE_YEAR_WINDOW … Y-1 inclusive; the current year is never stale, and
+ * years older than the window are assumed to be deliberate historical
+ * references (founding dates, cited papers, license years) rather than
+ * instructions that rotted.
+ */
+const STALE_YEAR_WINDOW = 7;
+/** Seam for tests; production callers always get the real clock. */
+export function currentYear(now = new Date()) {
+    return now.getFullYear();
+}
+let cachedYear = 0;
+let cachedYearRe = null;
 /**
  * Years likely stale in an AI instruction context.
- * 2023 is now included since the current year is 2026.
- * Must not be immediately preceded by "/" or "-" (avoids ISO dates like 2022-01-01
- * or paths like /2022/report) — those are not year references.
+ * Must not be immediately preceded or followed by "/" or "-" (avoids ISO dates
+ * like 2022-01-01 or paths like /2022/report) — those are not year references.
+ *
+ * Rebuilt only when the calendar year changes, so a long-running process that
+ * crosses midnight on New Year's Eve picks up the new window.
  */
-const STALE_YEAR_RE = /(?<![/-])\b(2019|2020|2021|2022|2023|2024|2025)\b(?![/-])/g;
+function staleYearPattern() {
+    const year = currentYear();
+    if (cachedYearRe && cachedYear === year)
+        return cachedYearRe;
+    const years = [];
+    for (let y = year - STALE_YEAR_WINDOW; y <= year - 1; y++)
+        years.push(String(y));
+    cachedYear = year;
+    cachedYearRe = new RegExp(`(?<![/-])\\b(${years.join('|')})\\b(?![/-])`, 'g');
+    return cachedYearRe;
+}
 /**
  * BUG-A1: Section headings that indicate historical records rather than active
  * instructions. Old year references in changelogs and release notes are expected
@@ -81,14 +115,10 @@ const OLD_VERSION_PATTERNS = [
 ];
 // ─── Helpers ─────────────────────────────────────────────────────────────────
 function issueId(section, tag) {
-    const key = `${section.filePath}:${section.startLine}:${tag}`;
+    const key = `${sectionIdPath(section)}:${section.startLine}:${tag}`;
     const hash = crypto.createHash('sha1').update(key).digest('hex').slice(0, 12);
     return `stale-${hash}`;
 }
-function snippet(text, maxLen = 120) {
-    const clean = text.replace(/\s+/g, ' ').trim();
-    return clean.length <= maxLen ? clean : `${clean.slice(0, maxLen)}…`;
-}
 function collectMatches(text, re) {
     const matches = [];
     let m;
@@ -117,7 +147,9 @@ function collectOldHtmlTodoMatches(text) {
     const cloned = new RegExp(HTML_COMMENT_DATED_TODO_RE.source, HTML_COMMENT_DATED_TODO_RE.flags);
     while ((m = cloned.exec(text)) !== null) {
         const year = Number(m[2]);
-        if (year <= 2025) {
+        // BUG-14: was `year <= 2025`. Anything before the current year is a dated
+        // marker that has already come due; the current year has not.
+        if (year < currentYear()) {
             matches.push(m[0]);
         }
     }
@@ -142,47 +174,6 @@ function isVersionInNegationContext(text, index) {
     const preceding = text.slice(Math.max(0, index - 80), index).toLowerCase();
     return /\b(?:do\s+not|don['']?t|avoid|never|no\s+longer|drop(?:ped|ping)?|remov(?:ed?|ing)|deprecat(?:ed?|ing)|stop(?:ped|ping)?\s+(?:using|support(?:ing)?))\b(?:(?!\n[ \t]*\n)[^.!?])*$/.test(preceding);
 }
-/**
- * Strip fenced code blocks from text before scanning for stale years.
- * Code blocks often contain version pins or changelog entries that are
- * expected to reference specific years and should not trigger the detector.
- *
- * ST3: tracks fence character + length (matching scanner.ts's S1 fix and
- * vague-guidance.ts's V4 fix) instead of a `` ```...``` `` regex, so ~~~
- * fences are also stripped and an unclosed fence correctly swallows the
- * remainder of the text (rather than leaving it unstripped, as
- * `/```[\s\S]*?```/` did when no closing fence existed).
- */
-function stripCodeBlocks(text, stripInlineCode = true) {
-    const lines = text.split('\n');
-    const kept = [];
-    let inBlock = false;
-    let fenceChar = null;
-    let fenceLen = 0;
-    for (const line of lines) {
-        if (!inBlock) {
-            const openMatch = /^ {0,3}([`~]{3,})/.exec(line);
-            if (openMatch) {
-                inBlock = true;
-                fenceChar = openMatch[1][0] ?? null;
-                fenceLen = openMatch[1].length;
-                continue;
-            }
-            kept.push(line);
-        }
-        else {
-            const closeMatch = /^ {0,3}([`~]{3,})\s*$/.exec(line);
-            if (closeMatch && closeMatch[1][0] === fenceChar && closeMatch[1].length >= fenceLen) {
-                inBlock = false;
-                fenceChar = null;
-                fenceLen = 0;
-            }
-            // else: still inside the fence — drop the line
-        }
-    }
-    const noFences = kept.join('\n');
-    return stripInlineCode ? noFences.replace(/`[^`\n]+`/g, '') : noFences;
-}
 // ─── Main detector ────────────────────────────────────────────────────────────
 /**
  * Detect sections that may contain stale or outdated instructions.
@@ -200,13 +191,13 @@ export function detectStaleInstructions(files) {
             if (section.heading && HISTORY_SECTION_RE.test(section.heading))
                 continue;
             const text = section.text;
-            const textNoCode = stripCodeBlocks(text);
-            const textNoFencedCode = stripCodeBlocks(text, false);
+            const textNoCode = stripCodeBlocks(text, { stripInlineCode: true });
+            const textNoFencedCode = stripCodeBlocks(text);
             const evidence = [];
             let confidence = 0;
             const sectionKey = `${file.path}:${section.startLine}`;
             // 1. Stale years — only in prose, not inside code blocks (confidence 0.6)
-            const yearMatches = collectMatches(textNoCode, STALE_YEAR_RE);
+            const yearMatches = collectMatches(textNoCode, staleYearPattern());
             if (yearMatches.length > 0) {
                 evidence.push(`Year reference(s) that may be outdated: ${[...new Set(yearMatches)].join(', ')}`);
                 confidence = Math.max(confidence, 0.6);
@@ -260,6 +251,13 @@ export function detectStaleInstructions(files) {
                 evidence: [`Section: "${snippet(text, 100)}"`, ...evidence],
                 recommendation: 'Review this section for accuracy. Update any outdated version numbers, tool references, ' +
                     'or remove temporary notes that are no longer relevant.',
+                // BUG-14: advisory only. This finding is deliberately NOT auto-fixable —
+                // a year in an instruction file may be a copyright line, a release date,
+                // a version pin, or a prose reference, and rewriting it to the current
+                // year corrupts every one of those.
+                fixRecipe: 'Edit each flagged reference by hand: replace outdated version pins and tool names with ' +
+                    'current ones, and delete temporary notes that no longer apply. Leave copyright lines, ' +
+                    'release dates, and historical references as they are.',
                 confidence,
             });
         }

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package/dist/subagents-detector.d.ts

@@ -0,0 +1,19 @@
+/**
+ * Subagents Detector (issue #23)
+ *
+ * Audits subagent definitions (`.claude/agents/*.md`) against known Claude Code
+ * conventions and against each other:
+ *
+ *  - Frontmatter validity: present, closed, required `name`/`description`.
+ *  - Unknown `model`: not a recognized Claude alias or `claude-*` id.
+ *  - Unknown `tools`: names that are not built-in tools or `mcp__*` tools
+ *    (a likely typo). Reported at low confidence — the tool set evolves.
+ *  - Duplicated system prompts: two agents whose bodies are near-identical,
+ *    which usually means a copy-paste that should be one agent.
+ *
+ * Deterministic and offline; findings are cautiously worded.
+ */
+import type { RepoContext } from './repo-context.js';
+import type { PromptCiIssue } from './types.js';
+export declare function detectSubagents(context: RepoContext): PromptCiIssue[];
+//# sourceMappingURL=subagents-detector.d.ts.map

package/dist/subagents-detector.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"subagents-detector.d.ts","sourceRoot":"","sources":["../src/subagents-detector.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;GAcG;AAGH,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,mBAAmB,CAAC;AACrD,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,YAAY,CAAC;AA8DhD,wBAAgB,eAAe,CAAC,OAAO,EAAE,WAAW,GAAG,aAAa,EAAE,CA0GrE"}

package/dist/subagents-detector.js

@@ -0,0 +1,155 @@
+/**
+ * Subagents Detector (issue #23)
+ *
+ * Audits subagent definitions (`.claude/agents/*.md`) against known Claude Code
+ * conventions and against each other:
+ *
+ *  - Frontmatter validity: present, closed, required `name`/`description`.
+ *  - Unknown `model`: not a recognized Claude alias or `claude-*` id.
+ *  - Unknown `tools`: names that are not built-in tools or `mcp__*` tools
+ *    (a likely typo). Reported at low confidence — the tool set evolves.
+ *  - Duplicated system prompts: two agents whose bodies are near-identical,
+ *    which usually means a copy-paste that should be one agent.
+ *
+ * Deterministic and offline; findings are cautiously worded.
+ */
+import * as path from 'node:path';
+import { parseFrontmatter, readTextWithinRoot, shortHash, asStringList, toPosix, withScannerPaths, aiConfigIssue as base, frontmatterStructureIssues, } from './ai-config.js';
+const SURFACE = {
+    idPrefix: 'agent',
+    noun: 'Subagent',
+    why: 'A subagent needs `name` and `description` frontmatter to be registered.',
+    recommendation: 'Add frontmatter with `name` and `description` at the top of the agent file.',
+};
+/** Recognized model aliases accepted in agent frontmatter. Full `claude-*` ids also pass. */
+const KNOWN_MODEL_ALIASES = new Set(['sonnet', 'opus', 'haiku', 'inherit', 'default', 'opusplan']);
+/** Built-in Claude Code tool names an agent may grant. `mcp__*` tools also pass. */
+const KNOWN_TOOLS = new Set([
+    'Task', 'Bash', 'BashOutput', 'KillBash', 'KillShell', 'Glob', 'Grep', 'LS',
+    'Read', 'Edit', 'MultiEdit', 'Write', 'NotebookRead', 'NotebookEdit',
+    'WebFetch', 'WebSearch', 'TodoWrite', 'SlashCommand', 'ExitPlanMode', 'Agent',
+]);
+/** Jaccard similarity at or above this over normalized body lines flags a near-duplicate. */
+const DUP_SIMILARITY = 0.8;
+/** Ignore trivially-short agent bodies when comparing for duplication. */
+const MIN_BODY_LINES = 5;
+function id(kind, key) {
+    return `ai-config-agent-${kind}-${shortHash(key)}`;
+}
+function normalizeBodyLines(body) {
+    const set = new Set();
+    for (const raw of body.split(/\r?\n/)) {
+        const norm = raw.trim().toLowerCase().replace(/\s+/g, ' ');
+        if (norm.length >= 8)
+            set.add(norm);
+    }
+    return set;
+}
+function jaccard(a, b) {
+    if (a.size === 0 || b.size === 0)
+        return 0;
+    let intersection = 0;
+    const [small, large] = a.size <= b.size ? [a, b] : [b, a];
+    for (const item of small)
+        if (large.has(item))
+            intersection++;
+    const union = a.size + b.size - intersection;
+    return union === 0 ? 0 : intersection / union;
+}
+export function detectSubagents(context) {
+    const issues = [];
+    const parsed = [];
+    for (const filePath of context.aiConfig.agents) {
+        const content = readTextWithinRoot(context.repoRoot, filePath);
+        if (content === undefined)
+            continue;
+        const fm = parseFrontmatter(content);
+        issues.push(...frontmatterStructureIssues(filePath, content, fm, SURFACE));
+        if (!fm.present)
+            continue;
+        const name = typeof fm.data.name === 'string' ? fm.data.name.trim() : undefined;
+        const description = typeof fm.data.description === 'string' ? fm.data.description.trim() : undefined;
+        if (!name) {
+            issues.push(base({
+                id: id('missing-name', filePath),
+                title: 'Subagent frontmatter is missing `name`',
+                summary: `${filePath} has no \`name\` field, so it cannot be invoked by name.`,
+                filePaths: [filePath],
+                locations: [{ filePath, startLine: 1, endLine: fm.fenceEndLine > 0 ? fm.fenceEndLine : 1 }],
+                evidence: [`Keys present: ${Object.keys(fm.data).join(', ') || '(none)'}`],
+                recommendation: 'Add a `name` field to the frontmatter.',
+                confidence: 0.85,
+            }));
+        }
+        if (!description) {
+            issues.push(base({
+                id: id('missing-description', filePath),
+                title: 'Subagent frontmatter is missing `description`',
+                summary: `${filePath} has no \`description\`. The description tells the orchestrator when to delegate to this agent.`,
+                filePaths: [filePath],
+                locations: [{ filePath, startLine: 1, endLine: fm.fenceEndLine > 0 ? fm.fenceEndLine : 1 }],
+                evidence: [`Keys present: ${Object.keys(fm.data).join(', ') || '(none)'}`],
+                recommendation: 'Add a `description` explaining what the agent is for and when to use it.',
+                confidence: 0.85,
+            }));
+        }
+        // Unknown model alias.
+        const model = typeof fm.data.model === 'string' ? fm.data.model.trim() : undefined;
+        if (model && !KNOWN_MODEL_ALIASES.has(model.toLowerCase()) && !/^claude-/i.test(model)) {
+            issues.push(base({
+                id: id('unknown-model', `${filePath}|${model}`),
+                title: 'Subagent references an unrecognized model',
+                summary: `${filePath}: \`model: ${model}\` is not a known alias (sonnet, opus, haiku, inherit) or a \`claude-*\` id.`,
+                filePaths: [filePath],
+                locations: [{ filePath, startLine: fm.keyLines.model ?? 1, endLine: fm.keyLines.model ?? 1 }],
+                evidence: [`model: ${model}`],
+                recommendation: 'Use a supported model alias or a full model id, or remove `model` to inherit the session model.',
+                confidence: 0.5,
+            }));
+        }
+        // Unknown tools (likely typos).
+        const tools = asStringList(fm.data.tools);
+        const unknownTools = tools.filter((t) => t !== '*' && !t.startsWith('mcp__') && !KNOWN_TOOLS.has(t));
+        if (unknownTools.length > 0) {
+            issues.push(base({
+                id: id('unknown-tools', `${filePath}|${unknownTools.join(',')}`),
+                severity: 'info',
+                title: 'Subagent grants tools that may not exist',
+                summary: `${filePath} lists ${unknownTools.length} tool name(s) that are not built-in tools or \`mcp__*\` tools: ${unknownTools.join(', ')}.`,
+                filePaths: [filePath],
+                locations: [{ filePath, startLine: fm.keyLines.tools ?? 1, endLine: fm.keyLines.tools ?? 1 }],
+                evidence: [`Unrecognized: ${unknownTools.join(', ')}`, `Declared tools: ${tools.join(', ')}`],
+                recommendation: 'Check the tool names against the built-in tool set (or your MCP server tool names) for typos.',
+                confidence: 0.4,
+            }));
+        }
+        const body = content.split(/\r?\n/).slice(Math.max(0, fm.bodyStartLine - 1)).join('\n');
+        const bodyLines = normalizeBodyLines(body);
+        parsed.push({ filePath, bodyLines });
+    }
+    // Duplicated system-prompt content across agents.
+    const comparable = parsed.filter((a) => a.bodyLines.size >= MIN_BODY_LINES);
+    for (let i = 0; i < comparable.length; i++) {
+        for (let j = i + 1; j < comparable.length; j++) {
+            const a = comparable[i];
+            const b = comparable[j];
+            const sim = jaccard(a.bodyLines, b.bodyLines);
+            if (sim >= DUP_SIMILARITY) {
+                const pair = [a.filePath, b.filePath].sort();
+                issues.push(base({
+                    id: id('dup-prompt', pair.join('|')),
+                    title: 'Two subagents share near-identical system prompts',
+                    summary: `${toPosix(path.basename(pair[0]))} and ${toPosix(path.basename(pair[1]))} have ${Math.round(sim * 100)}% identical prompt bodies, which usually means a copy-paste that should be consolidated.`,
+                    filePaths: pair,
+                    locations: pair.map((p) => ({ filePath: p, startLine: 1, endLine: 1 })),
+                    evidence: [`Body similarity: ${Math.round(sim * 100)}%`, `Agents: ${pair.join(', ')}`],
+                    recommendation: 'Differentiate the agents\' instructions, or merge them into one agent if they do the same job.',
+                    confidence: sim === 1 ? 0.8 : 0.55,
+                }));
+            }
+        }
+    }
+    // Scanner-form paths so inline suppressions can match (see withScannerPaths).
+    return withScannerPaths(context.repoRoot, issues);
+}
+//# sourceMappingURL=subagents-detector.js.map

package/dist/subagents-detector.js.map

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package/dist/suppression.d.ts

@@ -22,6 +22,8 @@
 import type { IssueCategory, InstructionFile, PromptCiIssue } from './types.js';
 export type SuppressionAnnotation = {
     filePath: string;
+    /** Repo-relative `filePath` (forward slashes), when the file came from the scanner. */
+    relativePath?: string;
     category: IssueCategory | 'all';
     reason: string;
     startLine: number;

package/dist/suppression.d.ts.map

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+{"version":3,"file":"suppression.d.ts","sourceRoot":"","sources":["../src/suppression.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;;;;;;GAoBG;AAGH,OAAO,KAAK,EAAE,aAAa,EAAE,eAAe,EAAsB,aAAa,EAAE,MAAM,YAAY,CAAC;AA6BpG,MAAM,MAAM,qBAAqB,GAAG;IAClC,QAAQ,EAAE,MAAM,CAAC;IACjB,uFAAuF;IACvF,YAAY,CAAC,EAAE,MAAM,CAAC;IACtB,QAAQ,EAAE,aAAa,GAAG,KAAK,CAAC;IAChC,MAAM,EAAE,MAAM,CAAC;IACf,SAAS,EAAE,MAAM,CAAC;IAClB,0DAA0D;IAC1D,OAAO,EAAE,MAAM,CAAC;IAChB,kFAAkF;IAClF,KAAK,EAAE,OAAO,CAAC;IACf,iBAAiB,CAAC,EAAE,MAAM,CAAC;CAC5B,CAAC;AAoOF;;;;GAIG;AACH,wBAAgB,iBAAiB,CAAC,KAAK,EAAE,eAAe,EAAE,GAAG,qBAAqB,EAAE,CAEnF;AAED;;;;GAIG;AACH,wBAAgB,qBAAqB,CACnC,WAAW,EAAE,qBAAqB,EAAE,GACnC,aAAa,EAAE,CAiBjB;AAED;;;;;;;;;;;;;GAaG;AACH,wBAAgB,iBAAiB,CAC/B,MAAM,EAAE,aAAa,EAAE,EACvB,WAAW,EAAE,qBAAqB,EAAE,GACnC;IAAE,MAAM,EAAE,aAAa,EAAE,CAAC;IAAC,UAAU,EAAE,aAAa,EAAE,CAAA;CAAE,CA4C1D"}

package/dist/suppression.js

@@ -20,6 +20,7 @@
  *   - An unpaired `promptci-ignore-start` (no matching end) → warning issue.
  */
 import * as crypto from 'node:crypto';
+import { blankCodeBlockLines } from './markdown-fences.js';
 // ── Constants ─────────────────────────────────────────────────────────────────
 /** All valid IssueCategory values plus the catch-all 'all' token. */
 const VALID_ISSUE_CATEGORIES = [
@@ -32,7 +33,9 @@ const VALID_ISSUE_CATEGORIES = [
     'structure',
     'command_validity',
     'agent_practices',
+    'ai_config',
     'security',
+    'custom',
 ];
 const VALID_SUPPRESSION_CATEGORIES = new Set([
     ...VALID_ISSUE_CATEGORIES,
@@ -90,7 +93,13 @@ function getSectionEndLine(annotationLine, annotationEndLine, sections, fileLine
 }
 /** Extract the `reason:` value from the comment body, or null if absent. */
 function extractReason(body) {
-    const m = /reason:\s*(.+?)(?:\n|$)/i.exec(body);
+    // The terminator must accept a CRLF (`\r\n`) line ending, not just `\n`.
+    // `.` never matches a line terminator (including `\r`), so on a CRLF
+    // checkout `/reason:\s*(.+?)(?:\n|$)/` finds no `\n` immediately after the
+    // captured reason (a `\r` sits between) and returns null — invalidating
+    // every otherwise-correct annotation. `\r?\n` closes on both endings; the
+    // trailing `.trim()` also strips any stray `\r` from the capture.
+    const m = /reason:\s*(.+?)(?:\r?\n|$)/i.exec(body);
     return m ? m[1].trim() : null;
 }
 function validate(rawCategory, reason) {
@@ -115,49 +124,6 @@ function annotationIssueId(filePath, startLine, tag) {
     const hash = crypto.createHash('sha1').update(key).digest('hex').slice(0, 12);
     return `suppression-invalid-${hash}`;
 }
-/**
- * SU3: blank out fenced code block lines (``` or ~~~, matching fence
- * char/length per CommonMark — the same tracking used in scanner.ts,
- * vague-guidance.ts, stale-instructions.ts, conflicts.ts, and
- * command-validity.ts) so a documented EXAMPLE of the annotation syntax
- * doesn't get parsed as a real suppression. The old approach only stripped
- * ` ``` ` fences via a single regex — a ~~~ fence containing an annotation
- * example was scanned as prose and treated as a REAL suppression.
- *
- * Replaces each fenced line with an empty string (not removing it) so the
- * total line count is unchanged — `charToLine` offsets computed against this
- * output still map to the correct line numbers in the ORIGINAL file.
- */
-function stripFencedBlocksPreservingLines(content) {
-    const lines = content.split('\n');
-    const kept = [];
-    let inBlock = false;
-    let fenceChar = null;
-    let fenceLen = 0;
-    for (const line of lines) {
-        if (!inBlock) {
-            const openMatch = /^ {0,3}([`~]{3,})/.exec(line);
-            if (openMatch) {
-                inBlock = true;
-                fenceChar = openMatch[1][0] ?? null;
-                fenceLen = openMatch[1].length;
-                kept.push('');
-                continue;
-            }
-            kept.push(line);
-        }
-        else {
-            const closeMatch = /^ {0,3}([`~]{3,})\s*$/.exec(line);
-            if (closeMatch && closeMatch[1][0] === fenceChar && closeMatch[1].length >= fenceLen) {
-                inBlock = false;
-                fenceChar = null;
-                fenceLen = 0;
-            }
-            kept.push('');
-        }
-    }
-    return kept.join('\n');
-}
 // ── Main parser ───────────────────────────────────────────────────────────────
 function parseFileSuppressions(file) {
     const { content, path: filePath, sections, lineCount } = file;
@@ -165,7 +131,7 @@ function parseFileSuppressions(file) {
     // Strip fenced code blocks before parsing so examples of the annotation
     // syntax (e.g. in README.md) don't get interpreted as real suppressions.
     // Preserve line count so offsets still map to the original file's lines.
-    const contentForParsing = stripFencedBlocksPreservingLines(content);
+    const contentForParsing = blankCodeBlockLines(content);
     // ── Single annotations ────────────────────────────────────────────────────
     const singleRe = new RegExp(SINGLE_RE.source, SINGLE_RE.flags);
     let m;
@@ -243,7 +209,10 @@ function parseFileSuppressions(file) {
     }
     if (openStart)
         pushUnpairedStart(openStart);
-    return annotations;
+    // Carried only for the invalid-annotation finding id (pcic-whm): matching
+    // against issues still uses the absolute `filePath`.
+    const { relativePath } = file;
+    return relativePath === undefined ? annotations : annotations.map((a) => ({ ...a, relativePath }));
 }
 // ── Public API ────────────────────────────────────────────────────────────────
 /**
@@ -263,7 +232,7 @@ export function buildValidationIssues(annotations) {
     return annotations
         .filter((ann) => !ann.valid)
         .map((ann) => ({
-        id: annotationIssueId(ann.filePath, ann.startLine, ann.validationMessage ?? ''),
+        id: annotationIssueId(ann.relativePath ?? ann.filePath, ann.startLine, ann.validationMessage ?? ''),
         severity: 'warning',
         category: 'structure',
         title: 'Invalid promptci-ignore annotation',

package/dist/suppression.js.map

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