@productbrain/cli 0.1.0-beta.47 → 0.1.0-beta.4721

package/dist/index.js

@@ -1,8 +1,7 @@
 #!/usr/bin/env node
 /**
- * Product Brain CLI — Chain knowledge + write-back in the terminal.
- * Read: BET-108. Write: pb session + pb capture (TEN-27, INS-80).
- * BET-181 Slice 0: global --json / --pretty flags for agent-native output (DEC-299).
+ * Product Brain CLI — Chain knowledge + write-back in the terminal. Read: BET-108.
+ * Write: pb session + pb capture (TEN-27, INS-80). BET-181 Slice 0: global --json / --pretty flags for agent-native output (DEC-299).
  */
 import { readFileSync } from 'node:fs';
 import { dirname, join } from 'node:path';
@@ -12,27 +11,32 @@ const __dirname = dirname(fileURLToPath(import.meta.url));
 const cliPackageVersion = JSON.parse(readFileSync(join(__dirname, '..', 'package.json'), 'utf8'));
 import { setOutputMode, setQuietMode, isJsonMode } from './lib/runner.js';
 import { CLIError, ErrorCode } from './lib/errors.js';
+import { collectRepeatableOption } from './lib/commanderOptions.js';
 import { runContext } from './commands/context.js';
 import { runGet, runGetMany } from './commands/get.js';
+import { runScoreboard } from './commands/scoreboard.js';
+import { runReworkReport } from './commands/rework.js';
 import { runConnect } from './commands/connect.js';
 import { runLogin } from './commands/login.js';
 import { runSetup } from './commands/setup.js';
+import { runSetupDetectSurfaces, formatDetectSurfacesSummary } from './commands/setup-detect-surfaces.js';
+import { runSetupState } from './commands/setup-state.js';
+import { runSetupAudit } from './commands/setup-audit.js';
 import { runOrient } from './commands/orient.js';
 import { runSearch } from './commands/search.js';
 import { runHandshake, runHandshakeInit } from './commands/handshake.js';
-import { runSessionStart, runSessionClose, runSessionId } from './commands/session.js';
+import { runSessionStart, runSessionClose, runSessionId, runSessionReset, runSessionList, runSessionShow } from './commands/session.js';
 import { runCapture } from './commands/capture.js';
 import { runUpdate } from './commands/update.js';
+import { runRestore } from './commands/restore.js';
 import { runRelate, runUnrelate } from './commands/relate.js';
 import { runIngest } from './commands/ingest.js';
 import { runFields } from './commands/fields.js';
 import { runConstellation } from './commands/constellation.js';
-import { runPromote } from './commands/promote.js';
+import { registerEntryCommands } from './registerEntryCommands.js';
 import { runBrandPack } from './commands/brand-pack.js';
 import { runAudit } from './commands/audit.js';
-import { runProposals } from './commands/proposals.js';
-import { runAccept } from './commands/accept.js';
-import { runReject } from './commands/reject.js';
+import { registerProposalCommands } from './registerProposalCommands.js';
 import { runChanges } from './commands/changes.js';
 import { runChainWalk } from './commands/chain-walk.js';
 import { runCrossCut } from './commands/cross-cut.js';
@@ -41,21 +45,37 @@ import { runVerify } from './commands/verify.js';
 import { runCodexPrep } from './commands/codex-prep.js';
 import { runCollectionsList, runCollectionsGet, runCollectionsAudit, runCollectionsExport } from './commands/collections.js';
 import { runWorkspaceVerify, runWorkspaceRepair, runDefinitionsDiff } from './commands/workspace.js';
+import { runAuthorityDomainsActivateCutover, runAuthorityDomainsAdd, runAuthorityDomainsDeactivateCutover, runAuthorityDomainsBenchmark, runAuthorityDomainsDiscardPending, runAuthorityDomainsPropose, runAuthorityDomainsQueueTag, runAuthorityDomainsRatify, runAuthorityDomainsReadiness, runAuthorityDomainsRecordSample, runAuthorityDomainsReject, runAuthorityDomainsReview, runAuthorityDomainsPrincipleDistribution, } from './commands/authority-domains.js';
 import { runDoctor } from './commands/doctor.js';
+import { runWhoami } from './commands/whoami.js';
+import { runFiles } from './commands/files.js';
+import { runUpgrade } from './commands/upgrade.js';
 import { runProfileList, runProfileCreate, runProfileUse, runProfileDelete } from './commands/profile.js';
 import { runInit } from './commands/init.js';
+import { runMethodList, runMethodShow, runMethodDiff, runMethodPublish } from './commands/method.js';
 import { createAdminCommand } from './commands/admin/index.js';
+import { createFeedbackCommand } from './commands/feedback.js';
+import { createConflictsCommand } from './commands/conflicts.js';
+import { createShapeCommand } from './commands/shape.js';
+import { createQuestionCommand } from './commands/questions.js';
+import { createDirectionCommand } from './commands/direction.js';
+import { createOrganisationCommand } from './commands/organisation.js';
+import { createAcceptPolicyCommand } from './commands/accept-policy.js'; // WP-661 S3
+import { runUsage } from './commands/usage.js';
+import { runProofRun } from './commands/proof-run.js';
+import { runQualitySpineCheck } from './commands/quality.js';
 import { GLOSSARY, formatGlossary } from './lib/glossary.js';
+import { API_KEY_PREFIX } from './lib/tokenConstants.js';
 import { hint, heading, bold, dim, green, icons } from './lib/style.js';
-import { readSession } from './lib/session.js';
-import { formatElapsed } from './lib/format.js';
-import { probeWorkspace } from './lib/workspace-probe.js';
+import { printPreviewBanner } from './lib/previewBanner.js';
+import { checkForUpdate } from './lib/update-check.js';
+import { UPGRADE_COMMAND } from './lib/constants.js';
+import { resolveSetupState, detectRenderTier } from './lib/state.js';
 const program = new Command();
 /**
- * Global error handler — single exit point for all CLI errors.
- * CLIError: format with code + category + guidance.
- * CommanderError: re-throw for --help / --version (exitCode 0), format others.
- * Regular Error: wrap as INTERNAL.
+ * Global error handler — single exit point for all CLI errors. CLIError: format with code +
+ * category + guidance. CommanderError: re-throw for --help / --version (exitCode 0), format
+ * others. Regular Error: wrap as INTERNAL.
  */
 function handleError(err) {
     // Commander help/version exits with code 0 — let them through
@@ -108,8 +128,8 @@ program
     .option('--pretty', 'Force human-readable output even when piped')
     .option('-q, --quiet', 'Suppress non-essential output (banners, hints, progress)')
     .exitOverride(); // Throw CommanderError instead of calling process.exit directly
-// Apply global output mode BEFORE subcommand actions run
-program.hook('preAction', (thisCommand) => {
+// Apply global output mode BEFORE subcommand actions run. Commander preAction hook signature: (hookedCommand = root program, actionCommand = the subcommand actually invoked).
+program.hook('preAction', (_hookedCommand, actionCommand) => {
     const globalOpts = program.opts();
     if (globalOpts.json) {
         setOutputMode('json');
@@ -121,24 +141,45 @@ program.hook('preAction', (thisCommand) => {
     if (globalOpts.quiet) {
         setQuietMode(true);
     }
-    void thisCommand;
+    // Ambient update notification — non-blocking, suppressed in JSON mode (WP-322 S1)
+    checkForUpdate(cliPackageVersion.version);
+    // PREVIEW banner — writes to stderr so it's always visible even in --json/--quiet mode. Advisory line added for top-level Chain-write commands: real learnings belong in the real Chain.
+    printPreviewBanner(actionCommand);
 });
-// Default action — status dashboard when `pb` is invoked with no command.
-// `pb --help` still works because Commander intercepts --help before the action runs.
+// Default action — status dashboard when `pb` is invoked with no command. `pb --help` still works because Commander intercepts --help before the action runs.
 program.action(async () => {
-    // Check if we have a valid API key (sync, no network)
-    let hasKey = false;
-    let config = null;
-    try {
-        const { getConfig: gc } = await import('./lib/config.js');
-        config = gc();
-        hasKey = true;
-    }
-    catch {
-        // No valid key
-    }
-    // JSON mode: structured status
-    if (isJsonMode()) {
+    // Alias handling — forward common shorthands before showing the welcome screen
+    if (program.args.length > 0) {
+        const args = program.args;
+        // `pb start` / `pb start session` → `pb session start`
+        if (args[0] === 'start') {
+            await runSessionStart();
+            return;
+        }
+        // `pb close` / `pb close session` → `pb session close`
+        if (args[0] === 'close') {
+            await runSessionClose({});
+            return;
+        }
+        // Unknown command — show a helpful error instead of the welcome screen
+        const unknown = args[0];
+        process.stderr.write(`error: unknown command '${unknown}'\n`);
+        process.stderr.write(`Run 'pb --help' to see available commands.\n`);
+        process.exit(1);
+    }
+    const tier = detectRenderTier();
+    // JSON tier — structured status output
+    if (tier === 'json') {
+        // Check for API key first (sync, no network)
+        let hasKey = false;
+        try {
+            const { getConfig: gc } = await import('./lib/config.js');
+            gc();
+            hasKey = true;
+        }
+        catch {
+            // No valid key
+        }
         if (!hasKey) {
             process.stdout.write(JSON.stringify({
                 configured: false,
@@ -146,6 +187,8 @@ program.action(async () => {
             }) + '\n');
             return;
         }
+        const { readSession } = await import('./lib/session.js');
+        const { probeWorkspace } = await import('./lib/workspace-probe.js');
         const session = readSession();
         const wsInfo = await probeWorkspace();
         process.stdout.write(JSON.stringify({
@@ -157,54 +200,64 @@ program.action(async () => {
         }) + '\n');
         return;
     }
-    // Human mode — not configured
-    if (!hasKey) {
-        process.stdout.write('\n');
-        process.stdout.write(`${bold('Product Brain')} ${dim('— not connected')}\n\n`);
-        process.stdout.write(`${heading('Get started')}\n\n`);
-        hint('1. pb login      Save your API key');
-        hint('2. pb setup      Connect a workspace');
-        hint('3. pb orient -b  See what\'s happening');
-        process.stdout.write('\n');
-        hint('pb --help        Show all commands');
-        process.stdout.write('\n');
-        return;
-    }
-    // Human mode — configured, try workspace probe
-    const session = readSession();
-    const wsInfo = await probeWorkspace();
-    const workspaceName = wsInfo?.name ?? null;
-    const entryCount = wsInfo?.entryCount ?? null;
-    const offline = !wsInfo;
-    process.stdout.write('\n');
-    if (offline) {
-        process.stdout.write(`${bold('Product Brain')} ${dim('— connected (offline)')}\n\n`);
-        process.stdout.write(`  ${green(icons.pass)} Key: configured\n`);
-        process.stdout.write(`  ${dim('Server: unreachable — check your connection')}\n\n`);
-        hint('pb doctor        Diagnose connection issues');
-        hint('pb --help        Show all commands');
+    // Ink tier: suppress withSpinner output before Ink mounts — spinner writes pollute the TUI canvas
+    if (tier === 'ink')
+        setQuietMode(true);
+    // Resolve state (plain and ink both need it)
+    const state = await resolveSetupState();
+    // Plain tier — console output driven by state
+    if (tier === 'plain') {
         process.stdout.write('\n');
+        if (state.stage === 'unconfigured') {
+            process.stdout.write(`${bold('Product Brain')} ${dim('— not connected')}\n\n`);
+            process.stdout.write(`${heading('Get started')}\n\n`);
+            hint('1. pb login      Save your API key');
+            hint('2. pb connect    Connect a workspace');
+            hint('3. pb orient -b  See what\'s happening');
+            process.stdout.write('\n');
+            hint('pb --help        Show all commands');
+            process.stdout.write('\n');
+        }
+        else if (state.stage === 'authenticated') {
+            process.stdout.write(`${bold('Product Brain')} ${dim('— server unreachable')}\n\n`);
+            process.stdout.write(`  ${green(icons.pass)} Key: configured\n`);
+            process.stdout.write(`  ! Server: unreachable — run pb doctor to diagnose\n\n`);
+            hint('pb session start    Start a write session');
+            hint('pb doctor           Diagnose connection issues');
+            hint('pb --help           Show all commands');
+            process.stdout.write('\n');
+        }
+        else {
+            // workspace-bound or active
+            const workspaceName = state.workspaceName ?? 'unknown';
+            const entryCount = state.entryCount ?? 0;
+            const title = `${bold('Product Brain')} ${dim('—')} ${bold(workspaceName)}`;
+            process.stdout.write(`${title}\n\n`);
+            process.stdout.write(`  ${green(icons.pass)} Key: configured\n`);
+            process.stdout.write(`  ${green(icons.pass)} Workspace: ${workspaceName}  (${entryCount} entries)\n`);
+            if (state.sessionActive) {
+                process.stdout.write(`  ${green(icons.pass)} Session: active\n`);
+            }
+            else {
+                process.stdout.write(`  ${dim('- Session: none')}\n`);
+            }
+            process.stdout.write('\n');
+            if (!state.sessionActive) {
+                hint('pb session start    Start a write session');
+            }
+            hint('pb orient -b        Workspace overview');
+            hint('pb --help           Show all commands');
+            process.stdout.write('\n');
+        }
         return;
     }
-    // Online with workspace
-    const title = workspaceName
-        ? `${bold('Product Brain')} ${dim('—')} ${bold(workspaceName)}`
-        : `${bold('Product Brain')}`;
-    process.stdout.write(`${title}\n\n`);
-    if (session) {
-        const elapsed = formatElapsed(session.startedAt);
-        process.stdout.write(`  Session: active (started ${elapsed})\n`);
-    }
-    if (entryCount !== null && entryCount > 0) {
-        process.stdout.write(`  Entries: ${entryCount}\n`);
-    }
-    process.stdout.write('\n');
-    if (!session) {
-        hint('pb session start  Start a write session');
-    }
-    hint('pb orient -b      Workspace overview');
-    hint('pb --help         Show all commands');
-    process.stdout.write('\n');
+    // Ink tier — interactive TUI
+    const version = cliPackageVersion.version;
+    const { render } = await import('ink');
+    const { WelcomeCockpit } = await import('./commands/welcome.js');
+    const React = await import('react');
+    const { waitUntilExit, unmount } = render(React.default.createElement(WelcomeCockpit, { state, version, onExit: () => unmount() }));
+    await waitUntilExit();
 });
 program
     .command('get <entry-id>')
@@ -216,6 +269,42 @@ program
     }
     await runGet({ entryId: entryId.trim() });
 });
+program
+    .command('scoreboard')
+    .description('Flywheel scoreboard — M1-M5 metrics + diagnosis layer (agent-primary; --json for structured consumption)')
+    .option('-t, --task <task>', 'Task context for the ranking-agreement (M2) + truth-state (M1) read')
+    .action(async (opts) => {
+    await runScoreboard({ ...(opts.task ? { task: opts.task } : {}) });
+});
+const qualityCmd = program
+    .command('quality')
+    .description('Quality-check surfaces');
+qualityCmd
+    .command('spine-check')
+    .description('Check purpose+vision+strategy structural completeness + refusal heuristic; --story runs the on-demand one-story LLM judgment')
+    .option('--story', 'Also run the on-demand one-story judgment (never scheduled; result labelled [unvalidated])')
+    .action(async (opts) => { await runQualitySpineCheck({ story: opts.story }); });
+const reworkCmd = program
+    .command('rework')
+    .description('Report observed rework signals (WP-487 / FEAT-1373 — fills the M4 rework meter)');
+reworkCmd
+    .command('report <entry-id>')
+    .description('Report a rework event attributed to a previously served governance entry (agent-native checkpoint; requires an active session)')
+    .requiredOption('--classification <kind>', 'revision | ci_review_correction | user_override')
+    .option('--via <kind>', 'How this was observed: followup_commit | ci_rerun | manual', 'manual')
+    .option('--attributable', 'Flag: this ci_review_correction is attributed to a missing/violated served decision')
+    .option('--task <text>', 'Task context this rework relates to (truncated server-side, never raw diff/comment text)')
+    .option('--conversation <id>', 'Explicit conversation override, matching `pb session start --conversation <id>` — use when the shell has no PB_CONVERSATION_ID set')
+    .action(async (entryId, opts) => {
+    await runReworkReport({
+        entryId,
+        classification: opts.classification,
+        reportedVia: opts.via,
+        attributable: opts.attributable,
+        task: opts.task,
+        conversation: opts.conversation,
+    });
+});
 program
     .command('get-many <entry-ids...>')
     .description('Fetch multiple entries in parallel (space-separated IDs)')
@@ -272,7 +361,7 @@ program
     .description('Brief intelligence queries (BET-239).\n' +
     '  pb brief --skill <name>    Incremental delta for a skill (E4)\n' +
     '  pb brief steering          Compound: changes + structure + delta + readiness (E6)\n' +
-    '  pb brief confidence        Compound: changes + active bets + tensions (E6)\n' +
+    '  pb brief confidence        Compound: changes + active work packages + tensions (E6)\n' +
     '  pb brief delta [--since]   Compound: changes + relations since timestamp (E6)')
     .option('--skill <name>', 'Skill name for incremental brief (e.g. preflight, shaping, review)')
     .option('--since-last', 'Compare against last brief run (incremental mode)')
@@ -306,41 +395,51 @@ program
 });
 program
     .command('orient')
-    .description('Print workspace stage and all orient sections (strategic context, bets, governance, tensions, etc.)')
-    .option('-b, --brief', 'Compact view: stage, counts, top bets, tensions, planned work')
+    .description('Print workspace stage and all orient sections (strategic context, work packages, governance, tensions, etc.)')
+    .option('-b, --brief', 'Compact view: stage, counts, top work packages, tensions, planned work')
     .option('-t, --task <task>', 'Task description for task-shaped governance and context')
-    // SYNC: domain list must match TaskDomain in convex/agentKnowledge/startupResolver.ts
-    .option('-s, --scope <domain>', 'Domain scope for governance filtering. Valid values: auth, governance, architecture, product, data-foundation, chainwork, capture-pipeline, ingestion, intelligence-and-operations, review-and-learning, general')
+    .option('-s, --scope <domain>', 'Domain scope for governance filtering. Forwarded to the workspace model for validation and custom domain resolution.')
+    .option('--full', 'Full depth orient (tier=full). Use for thorough context loading.')
     .action(async (opts) => {
-    await runOrient({ brief: opts.brief, task: opts.task?.trim() || undefined, scope: opts.scope?.trim() || undefined });
+    await runOrient({ brief: opts.brief, task: opts.task?.trim() || undefined, scope: opts.scope?.trim() || undefined, full: opts.full });
 });
 program
     .command('handshake')
     .description('Generate context files for AI developer tools (AGENTS.md, .codex/skills/, CLAUDE.md, .cursor/rules/, .github/copilot-instructions.md)')
     .option('--force', 'Overwrite adapter files even if they exist without auto-generated marker')
-    .option('--dry-run', 'Show what would be generated without writing files')
+    .option('--apply', 'Write files (default: preview only)')
+    .option('--dry-run', 'Show what would be generated without writing files (alias for preview)')
     .option('--init', 'Set up Claude Code integration: team hooks + personal trust level')
     .option('--level <level>', 'With --init: trust level (guide|work|silent|full-trust). Without --init: content tier (beginner|intermediate|expert)')
     .option('--generate', 'Fetch governance entries from the Chain and merge generated rules (BET-286)')
     .option('--surfaces <list>', 'Comma-separated surfaces to write (cursor,claude,copilot,codex)')
+    .option('--no-prompt', 'Headless mode: refuse on tampered projection files (WP-421 S3, doneWhen #17). Always implied when stdout is not a TTY.')
+    .option('--lenient', 'WP-439 S4: continue past setup-asset body fetch failures with a warning (legacy behaviour). By default, body fetch failures are hard errors; run `pb setup-audit --repair` to fix orphaned rows.')
     .action(async (opts) => {
     if (opts.init) {
         await runHandshakeInit({ level: opts.level, dryRun: opts.dryRun });
         return;
     }
-    await runHandshake({ force: opts.force, dryRun: opts.dryRun, level: opts.level, generate: opts.generate, surfaces: opts.surfaces?.split(',') });
+    // Commander turns `--no-prompt` into `prompt: false`. We invert so HandshakeOptions sees noPrompt=true.
+    const noPrompt = opts.prompt === false;
+    // Attribute the bare-handshake invocation so its context.served row is separable from
+    // session-start ('session-start') / session-close ('session-close') / manual orient rows.
+    // Without this, the kernel used to coerce the absent path to 'manual-orient', polluting the
+    // proof slice that isolates manual `pb orient --task` rows (the 'handshake' union member was otherwise never emitted).
+    await runHandshake({ force: opts.force, apply: opts.apply, dryRun: opts.dryRun, level: opts.level, generate: opts.generate, surfaces: opts.surfaces?.split(','), noPrompt, lenient: opts.lenient, invocationPath: 'handshake' });
 });
 program
     .command('codex-prep <task...>')
     .description('Generate task-specific governance context for Codex (.codex/task-context.md)')
     .option('--dry-run', 'Print to stdout instead of writing file')
+    .option('--full', 'Full depth orient (tier=full). Use for thorough context loading.')
     .action(async (taskParts, opts) => {
     const task = taskParts.join(' ').trim();
     if (!task) {
         program.commands.find((c) => c.name() === 'codex-prep')?.help();
         return;
     }
-    await runCodexPrep({ task, dryRun: opts.dryRun });
+    await runCodexPrep({ task, dryRun: opts.dryRun, full: opts.full });
 });
 program
     .command('init')
@@ -350,14 +449,16 @@ program
 });
 program
     .command('connect <token>')
-    .description('Redeem an onboarding token and save your API key locally (FEAT-958). Uses CONVEX_SITE_URL if set, otherwise the production gateway. Override with --gateway or PB_CONNECT_GATEWAY_URL.')
+    .description('Redeem an onboarding token and save your API key locally (FEAT-958). Uses CONVEX_SITE_URL if set, otherwise the production gateway. Override with --gateway or PB_CONNECT_GATEWAY_URL. In a non-interactive shell (e.g. CI), pass --yes to confirm the workspace, optionally with --name to label the key.')
     .option('--gateway <url>', 'Override redeem gateway (default: CONVEX_SITE_URL or production). Use when token came from a different Convex deployment.')
+    .option('--name <label>', 'Optional label for this API key in workspace settings. Skips the key-label prompt when set.')
+    .option('-y, --yes', 'Skip the interactive workspace confirmation. Required to connect in a non-interactive shell (e.g. CI).')
     .action(async (token, opts) => {
     if (!token?.trim()) {
         program.commands.find((c) => c.name() === 'connect')?.help();
         return;
     }
-    await runConnect(token.trim(), { gateway: opts.gateway });
+    await runConnect(token.trim(), { gateway: opts.gateway, name: opts.name, assumeYes: opts.yes });
 });
 program
     .command('login')
@@ -373,12 +474,54 @@ program
     .action(async (opts) => {
     await runDoctor({ fix: opts.fix, dryRun: opts.dryRun });
 });
+program
+    .command('whoami')
+    .alias('status')
+    .description('Show the active profile + workspace (fast; no session required).')
+    .action(async () => {
+    await runWhoami();
+});
+program
+    .command('files')
+    .description('Show which .productbrain files are pb-owned vs committed, and what writes each.')
+    .option('--fix', 'Add any exposed pb-owned files to .gitignore (idempotent)')
+    .option('--dry-run', 'With --fix: preview the .gitignore lines without writing')
+    .action(async (opts) => {
+    await runFiles({ fix: opts.fix, dryRun: opts.dryRun });
+});
 program
     .command('setup')
-    .description('Guided first-time setup: account, login, workspace, first capture')
+    .description('Canonical pb-setup entry (DEC-995): detect surfaces, read state, emit JSON for the skill body.')
     .action(async () => {
     await runSetup();
 });
+program
+    .command('setup-detect-surfaces')
+    .description('Detect local surface markers and union-merge into manifest.surfaces (STD-235 forward-only)')
+    .action(async () => {
+    const result = await runSetupDetectSurfaces();
+    if (process.stdout.isTTY) {
+        process.stdout.write(formatDetectSurfacesSummary(result) + '\n');
+    }
+    else {
+        process.stderr.write(formatDetectSurfacesSummary(result) + '\n');
+    }
+});
+program
+    .command('setup-state')
+    .description('Emit compact JSON of getPbSetupState (machine-readable, used by the pb-setup skill body)')
+    .action(async () => {
+    await runSetupState();
+});
+// WP-439 S2: setup-asset orphan audit. Read-only diagnostic; exits 1 if any setup_asset row has a broken body wiring (will fail at handshake). WP-439 S3: --repair attempts to restore class III/II orphans from STARTER_* constants. Class I (inline-only) and IV (hash drift) are NOT touched.
+program
+    .command('setup-audit')
+    .description('Audit setup_asset rows for orphaned bodies (WP-439 S2/S3). Exits 1 if any orphan or repair-failure.')
+    .option('--json', 'Emit machine-readable JSON (overrides pretty output for this command)')
+    .option('--repair', 'Attempt to restore class III/II orphans from STARTER_* constants (WP-439 S3)')
+    .action(async (opts) => {
+    await runSetupAudit({ json: opts.json, repair: opts.repair });
+});
 // --- Write commands (require active session) ---
 const sessionCmd = program
     .command('session')
@@ -387,8 +530,9 @@ sessionCmd
     .command('start')
     .description('Start a tracked write session (opens session, refreshes context)')
     .option('--json', 'Output machine-readable JSON (deprecated: use global --json flag)')
+    .option('--conversation <id>', 'Explicit conversation identity override (WP-479 E2) — takes priority over env-detected channels. Pair with PB_CONVERSATION_ID=<id> so later bare pb commands (orient, capture) attribute to the same conversation — they resolve identity from env only')
     .action(async (opts) => {
-    await runSessionStart({ json: opts.json });
+    await runSessionStart({ json: opts.json, conversation: opts.conversation });
 });
 sessionCmd
     .command('id')
@@ -403,17 +547,45 @@ sessionCmd
     .action(async (opts) => {
     await runSessionClose({ force: opts.force });
 });
+// WP-479 E4: traceback + quota observability.
+sessionCmd
+    .command('list')
+    .description('List active sessions (with quota gauge) + recent non-active ones (WP-479 E4)')
+    .action(async () => {
+    await runSessionList();
+});
+sessionCmd
+    .command('show <id-or-conversation>')
+    .description('Show a conversation\'s full session lineage + governance serves (WP-479 E4)')
+    .action(async (idOrConversation) => {
+    await runSessionShow(idOrConversation);
+});
+// TEN-2189 / WP-456 E2: hard-reset worktree-local session state (no resume marker) + clear the PREVIEW_MODE marker. Recovery path for a session stranded on the wrong workspace after a pb:preview/pb:real binding flip.
+sessionCmd
+    .command('reset')
+    .description('Hard-reset local session state (discard session.json + clear PREVIEW_MODE)')
+    .option('--force', 'Skip the confirmation prompt when an active session is present')
+    .action(async (opts) => {
+    await runSessionReset({ force: opts.force });
+});
 program
     .command('capture [text...]')
     .description('Capture knowledge to the Chain (requires active session)')
     .option('-n, --name <name>', 'Entry name (defaults to capture text)')
     .option('-d, --description <desc>', 'Entry description (defaults to capture text)')
     .option('-c, --collection <slug>', 'Explicit collection (skip auto-classification)')
+    .option('-f, --field <key=value>', 'Set a data field (repeatable; e.g. rationale="...")', (val, prev) => [...prev, val], [])
     .option('-l, --link <entry-id>', 'Link new entry to an existing entry (TEN-705)')
     .option('-t, --type <relation-type>', 'Relation type for --link (default: surfaces_tension_in)')
     .option('--source-ref <ref>', 'Source reference URI (BET-240 E2: e.g. "meeting-2026-03-28.md")')
     .option('--source-excerpt <text>', 'Verbatim source excerpt (BET-240 E2)')
+    // TEN-2226 / WP-456 E1: opt-in override — keeps the entry a draft even in Open governance mode.
+    .option('--draft', 'Force the entry to draft regardless of workspace governance mode (TEN-2226)')
     .option('--json', 'Output machine-readable JSON (deprecated: use global --json flag)')
+    .option('--suggest-only', 'Show grounding preview (possible duplicates, related entries) without creating entry (WP-319)')
+    .option('--strict', 'Prompt y/N before capturing when a possible duplicate is detected (WP-319)')
+    .option('--owner-team <entry-id>', 'Existing Team entry ID to create AS OWNER of (WP-513 rung 2; pair with --owner-role)')
+    .option('--owner-role <entry-id>', 'Existing Role entry ID to create AS OWNER of (WP-513 rung 2; pair with --owner-team)')
     .action(async (textParts = [], opts) => {
     const text = textParts.join(' ').trim();
     if (!text && !opts.name) {
@@ -421,15 +593,10 @@ program
         return;
     }
     await runCapture({
-        text: text || opts.name || '',
-        name: opts.name,
-        description: opts.description,
-        collection: opts.collection,
-        link: opts.link,
-        type: opts.type,
-        sourceRef: opts.sourceRef,
-        sourceExcerpt: opts.sourceExcerpt,
-        json: opts.json,
+        text: text || opts.name || '', name: opts.name, description: opts.description, collection: opts.collection,
+        field: opts.field, link: opts.link, type: opts.type, sourceRef: opts.sourceRef, sourceExcerpt: opts.sourceExcerpt,
+        draft: opts.draft, json: opts.json, suggestOnly: opts.suggestOnly, strict: opts.strict,
+        ownerTeam: opts.ownerTeam, ownerRole: opts.ownerRole,
     });
 });
 // --- Update command (TEN-703) ---
@@ -440,17 +607,25 @@ program
     .option('--name <name>', 'Update entry name')
     .option('--status <status>', 'Update entry status (draft | active | deprecated | archived)')
     .option('--workflow-status <status>', 'Set workflow status (server-validated)')
+    .option('--type <canonical-key>', 'Reclassify a DRAFT entry to another canonical type (immutable once committed — supersede instead)')
     .option('--note <text>', 'Change note for history')
+    .option('--override-reason <text>', 'Typed override (≥12 chars) clearing a steering coherency block — recorded with author attribution (WP-465)')
+    .option('--acknowledge <response>', 'Respond to a coherency challenge: linked | accepted-fix | diverged (WP-465)')
+    .option('--ack-entry <entry-id>', 'Authorizing entry for --acknowledge linked / accepted-fix')
+    .option('--ack-reason <text>', 'Divergence rationale (≥12 chars) for --acknowledge diverged')
+    // Commander camelCases every flag to exactly the UpdateOptions key it feeds, so the options
+    // object spreads straight through. The previous hand-written 1:1 mapping had to be edited twice
+    // per new flag (once here, once in the type) and silently dropped anything you forgot.
     .action(async (entryId, opts) => {
-    await runUpdate({
-        entryId,
-        field: opts.field,
-        name: opts.name,
-        status: opts.status,
-        workflowStatus: opts.workflowStatus,
-        note: opts.note,
-    });
+    await runUpdate({ entryId, ...opts });
 });
+// --- Restore command (WP-514 review round 2, P1) ---
+program
+    .command('restore <entry-id>')
+    .description('Restore an archived Chain entry to draft (requires active session + rung-3 authority coverage)')
+    .action(async (entryId) => { await runRestore(entryId); });
+// --- Entry noun-scoped commands (DEC-1574, WP-640 S4) — registerEntryCommands.ts ---
+registerEntryCommands(program);
 // --- Promote command (Wave 2 CLI Polish) ---
 program
     .command('verify <entry-id>')
@@ -462,13 +637,8 @@ program
     }
     await runVerify({ entryId: entryId.trim() });
 });
-program
-    .command('promote <entry-id>')
-    .description('Promote entry from draft to active (commit to SSOT)')
-    .option('-m, --message <text>', 'Commit message')
-    .action(async (entryId, opts) => {
-    await runPromote({ entryId, message: opts.message });
-});
+// `pb promote` retirement (DEC-1578) — registerProposalCommands.ts
+registerProposalCommands(program);
 // --- Relate / Unrelate commands (TEN-704) ---
 program
     .command('relate <from-id> <type> <to-id>')
@@ -505,6 +675,30 @@ program
         concurrency,
     });
 });
+// --- migrate:setup command (WP-345 S0b) ---
+program
+    .command('migrate:setup')
+    .description('Migrate .productbrain/skills|rules|hooks/*.md into the DB setup-assets collection (WP-345)')
+    .option('--dry-run', 'Show what would be migrated without writing to DB.')
+    .option('--cwd <path>', 'Override working directory (default: process.cwd())')
+    .action(async (opts) => {
+    const { runMigrateSetup } = await import('./commands/migrate-setup.js');
+    await runMigrateSetup({ dryRun: opts.dryRun, cwd: opts.cwd });
+});
+// --- setup:ingest command (WP-345 S3) ---
+program
+    .command('setup:ingest <path>')
+    .description('Push a single .productbrain skill/rule/hook file to the DB setup-assets SSOT (WP-345)')
+    .option('--dry-run', 'Show what would be ingested without writing to DB.')
+    .option('--json', 'Output machine-readable JSON (deprecated: use global --json flag)')
+    .action(async (filePath, opts) => {
+    if (!filePath?.trim()) {
+        program.commands.find((c) => c.name() === 'setup:ingest')?.help();
+        return;
+    }
+    const { runSetupIngest } = await import('./commands/setup-ingest.js');
+    await runSetupIngest(filePath.trim(), { dryRun: opts.dryRun });
+});
 // --- Fields command (BET-181 Slice 2) ---
 program
     .command('fields <collection>')
@@ -530,7 +724,7 @@ program
 // --- Audit command (BET-182 Slice 2) ---
 program
     .command('audit <entry-ids...>')
-    .description('Run STD-113 hygiene audit on bet(s) — 13 gates, exit code reflects verdict')
+    .description('Run hygiene audit on work package(s) — 13 gates (shaping) / 18 gates (handoff), exit code reflects verdict')
     .option('--phase <phase>', 'Override phase detection (shaping | handoff)')
     .option('--gate <name>', 'Run only specified gate(s) (repeatable)', (val, prev) => [...prev, val], [])
     .option('--fix', 'Auto-execute exact fixes via pb update, rerun once')
@@ -552,33 +746,6 @@ program
     .action(() => {
     runBrandPack(process.argv);
 });
-// --- Governance proposal commands (BET-221 Slice 3) ---
-program
-    .command('proposals')
-    .description('List open consent proposals with expiry countdown (BET-221)')
-    .action(async () => {
-    await runProposals();
-});
-program
-    .command('accept [proposal-id]')
-    .description('Approve a consent proposal by ID, or --auto to batch-approve all')
-    .option('-a, --auto', 'Auto-approve all open proposals (skip contradictions)')
-    .action(async (proposalId, opts) => {
-    if (!proposalId && !opts.auto) {
-        throw new CLIError('Usage: pb accept <proposal-id> or pb accept --auto', {
-            code: ErrorCode.VALIDATION_FAILED,
-            category: 'validation',
-        });
-    }
-    await runAccept({ proposalId, auto: opts.auto });
-});
-program
-    .command('reject <proposal-id>')
-    .description('Reject a consent proposal with a required reason (BR-7)')
-    .requiredOption('-r, --reason <text>', 'Reason for rejection (required)')
-    .action(async (proposalId, opts) => {
-    await runReject({ proposalId, reason: opts.reason });
-});
 // --- Collections command (BET-280 Slice 1) ---
 const collectionsCmd = program
     .command('collections')
@@ -627,6 +794,115 @@ workspaceCmd
     .action(async () => {
     await runWorkspaceRepair();
 });
+const authorityDomainsCmd = program
+    .command('authority-domains')
+    .description('Operator commands for WP-354 authority-domain readiness and evidence');
+authorityDomainsCmd
+    .command('add <slug>')
+    .description('Create an authority domain for this workspace')
+    .option('--description <description>', 'Authority-domain description')
+    .option('--alias <alias>', 'Alias/keyword for this domain (repeatable)', collectRepeatableOption)
+    .option('--path-glob <glob>', 'Changed-path glob for this domain (repeatable)', collectRepeatableOption)
+    .action(async (slug, opts) => {
+    await runAuthorityDomainsAdd(slug, opts);
+});
+authorityDomainsCmd
+    .command('propose')
+    .description('Generate authority-domain tag proposals')
+    .option('--dry-run', 'Preview without writing staging proposals')
+    .option('--limit <n>', 'Maximum governance entries to classify')
+    .option('--mock', 'Use deterministic mock classifier')
+    .action(async (opts) => {
+    await runAuthorityDomainsPropose(opts);
+});
+authorityDomainsCmd
+    .command('review')
+    .description('List authority-domain tag proposals')
+    .option('--status <status>', 'pending, committed, rejected, or skipped', 'pending')
+    .option('--limit <n>', 'Maximum proposals to list')
+    .option('--sample <n>', 'Return a stable proposal sample')
+    .option('--stratified', 'Stratify sample across proposed domain and source collection')
+    .action(async (opts) => {
+    await runAuthorityDomainsReview(opts);
+});
+const authorityDomainsSampleCmd = authorityDomainsCmd
+    .command('sample')
+    .description('Manage human-reviewed authority-domain proposal samples');
+authorityDomainsSampleCmd
+    .command('record')
+    .description('Record human-reviewed sample accuracy for authority-domain proposals')
+    .requiredOption('--sample-id <id>', 'Stable sample identifier from the review packet')
+    .option('--run-id <id>', 'Proposal run identifier')
+    .requiredOption('--approved <n>', 'Count of sampled proposals approved as-is')
+    .requiredOption('--rejected <n>', 'Count of sampled proposals rejected')
+    .requiredOption('--corrected <n>', 'Count of sampled proposals corrected to another domain')
+    .action(async (opts) => {
+    await runAuthorityDomainsRecordSample(opts);
+});
+authorityDomainsCmd
+    .command('ratify <proposal-id>')
+    .description('Ratify an authority-domain tag proposal')
+    .option('--note <note>', 'Review note')
+    .action(async (proposalId, opts) => {
+    await runAuthorityDomainsRatify(proposalId, opts);
+});
+authorityDomainsCmd
+    .command('queue-tag')
+    .description('Queue a known-correct authority-domain tag proposal')
+    .requiredOption('--entry <entryId>', 'Entry ID to tag, e.g. DEC-1244')
+    .requiredOption('--domain <domainSlug>', 'Authority-domain slug, e.g. product-design/ux')
+    .option('--note <note>', 'Known-correct evidence note')
+    .option('--ratify', 'Immediately ratify using the generated confirmation string')
+    .action(async (opts) => {
+    await runAuthorityDomainsQueueTag(opts);
+});
+authorityDomainsCmd
+    .command('reject <proposal-id>')
+    .description('Reject an authority-domain tag proposal')
+    .option('--reason <reason>', 'Rejection reason')
+    .action(async (proposalId, opts) => {
+    await runAuthorityDomainsReject(proposalId, opts);
+});
+authorityDomainsCmd
+    .command('discard-pending')
+    .description('Reject all pending authority-domain tag proposals after a failed batch diagnosis')
+    .option('--reason <reason>', 'Discard reason')
+    .action(async (opts) => {
+    await runAuthorityDomainsDiscardPending(opts);
+});
+authorityDomainsCmd
+    .command('readiness')
+    .description('Show WP-354 authority-domain readiness, evidence gap, and next action')
+    .action(async () => {
+    await runAuthorityDomainsReadiness();
+});
+authorityDomainsCmd
+    .command('benchmark')
+    .description('Run and persist the WP-354 authority-domain benchmark')
+    .action(async () => {
+    await runAuthorityDomainsBenchmark();
+});
+authorityDomainsCmd
+    .command('activate-cutover')
+    .description('Activate graph retrieval after WP-354 evidence gates pass')
+    .option('--force-pre-production', 'Bypass the permanently-locked valueProof gate (requires --dec-id, DEC-864)')
+    .option('--dec-id <decId>', 'Chain DEC ID authorizing the bypass')
+    .action(async (opts) => {
+    await runAuthorityDomainsActivateCutover({ forcePreProduction: opts.forcePreProduction, decId: opts.decId });
+});
+authorityDomainsCmd
+    .command('deactivate-cutover')
+    .description('Deactivate the active WP-354 authorityDomain cutover for this workspace (DEC-864 rollback).')
+    .option('--clerk-user-id <clerkUserId>', 'Override the Clerk user ID for audit trail')
+    .action(async (opts) => {
+    await runAuthorityDomainsDeactivateCutover({ clerkUserId: opts.clerkUserId });
+});
+authorityDomainsCmd
+    .command('principle-distribution')
+    .description('Pre-merge gate: check governance category match rate for principles entries')
+    .action(async () => {
+    await runAuthorityDomainsPrincipleDistribution();
+});
 // --- Definitions diff command (WP-305 Slice 4) ---
 const definitionsCmd = program
     .command('definitions')
@@ -637,6 +913,47 @@ definitionsCmd
     .action(async (file) => {
     await runDefinitionsDiff({ file });
 });
+// --- Method commands (WP-329 S1: method visibility) ---
+const methodCmd = program
+    .command('method')
+    .description('Inspect published methods (skills + rules) and their per-surface adapter status (WP-329)');
+methodCmd
+    .command('ls')
+    .description('List all methods with version, published status, and adapter presence')
+    .action(async () => {
+    await runMethodList();
+});
+methodCmd
+    .command('show <name>')
+    .description('Show details for one method: frontmatter, Chain entry, and per-adapter fork status')
+    .action(async (name) => {
+    if (!name?.trim()) {
+        program.commands.find((c) => c.name() === 'method')?.help();
+        return;
+    }
+    await runMethodShow({ name: name.trim() });
+});
+methodCmd
+    .command('diff <name>')
+    .description('Show diff between local .productbrain/ source and last-published Chain version (WP-329 S2)')
+    .action(async (name) => {
+    if (!name?.trim()) {
+        program.commands.find((c) => c.name() === 'method')?.help();
+        return;
+    }
+    await runMethodDiff({ name: name.trim() });
+});
+methodCmd
+    .command('publish <name>')
+    .description('Publish a local .productbrain/ method (skill or rule) to the Chain methods collection (WP-329 S3)')
+    .option('--force', 'Publish even when local body matches the last-published version (override D4 no-op guard)')
+    .action(async (name, opts) => {
+    if (!name?.trim()) {
+        program.commands.find((c) => c.name() === 'method')?.help();
+        return;
+    }
+    await runMethodPublish({ name: name.trim(), force: opts.force });
+});
 // --- Profile commands (WP-302 Slice 2) ---
 const profileCmd = program
     .command('profile')
@@ -650,16 +967,18 @@ profileCmd
 profileCmd
     .command('create <name>')
     .description('Create a new profile with an API key')
-    .requiredOption('--api-key <key>', 'API key (pb_sk_...)')
+    .requiredOption('--api-key <key>', `API key (${API_KEY_PREFIX}...)`)
     .option('--url <url>', 'Convex site URL (defaults to production)')
     .action(async (name, opts) => {
     await runProfileCreate({ name, apiKey: opts.apiKey, url: opts.url });
 });
 profileCmd
     .command('use <name>')
-    .description('Switch active profile (closes any active session)')
-    .action(async (name) => {
-    await runProfileUse({ name });
+    .description('Switch profile: reconciles the repo pin + global by default. --local = repo pin only; --global = global only.')
+    .option('--local', 'Write the profile pin only to .productbrain/config.local.json (repo-local, gitignored)')
+    .option('--global', 'Switch only the global active profile (does not change a locally-pinned repo)')
+    .action(async (name, opts) => {
+    await runProfileUse({ name, local: opts.local, global: opts.global });
 });
 profileCmd
     .command('delete <name>')
@@ -667,6 +986,14 @@ profileCmd
     .action(async (name) => {
     await runProfileDelete({ name });
 });
+program
+    .command('use <name>')
+    .description('Switch the active workspace profile (alias for `pb profile use`).')
+    .option('--local', 'Write the profile pin only to .productbrain/config.local.json (repo-local, gitignored)')
+    .option('--global', 'Switch only the global active profile (does not change a locally-pinned repo)')
+    .action(async (name, opts) => {
+    await runProfileUse({ name, local: opts.local, global: opts.global });
+});
 // --- Glossary command (WP-302 Slice 4) ---
 program
     .command('glossary')
@@ -685,8 +1012,37 @@ program
     ];
     process.stdout.write(lines.join('\n') + '\n');
 });
+// --- Usage command (WP-322 S4, FEAT-1011) ---
+program
+    .command('usage')
+    .description('Session and activity dashboard — 4-tab Ink TUI (WP-322)')
+    .option('--json', 'Output machine-readable JSON (sessions, entries30d, activity array)')
+    .action(async (opts) => {
+    await runUsage({ json: opts.json });
+});
+// --- Proof-run command (WP-459: admin-proof bridge dogfood) ---
+program
+    .command('proof-run <proof-name>')
+    .description('Run an admin-only proof against the seeded preview via the proof bridge (WP-459)')
+    .action(async (proofName) => {
+    await runProofRun({ proofName: proofName.trim() });
+});
 // --- Admin command group (WP-312 S2, FEAT-969) ---
 program.addCommand(createAdminCommand());
+program.addCommand(createFeedbackCommand());
+program.addCommand(createConflictsCommand());
+program.addCommand(createShapeCommand());
+program.addCommand(createQuestionCommand());
+program.addCommand(createDirectionCommand());
+program.addCommand(createOrganisationCommand());
+program.addCommand(createAcceptPolicyCommand());
+// --- Upgrade command (WP-322 S1: ambient update notification) ---
+program
+    .command('upgrade')
+    .description(`Upgrade pb CLI to the latest beta (${UPGRADE_COMMAND})`)
+    .action(async () => {
+    await runUpgrade({ currentVersion: cliPackageVersion.version });
+});
 // Parse with global error handler — all uncaught errors route through handleError
-program.parseAsync().catch(handleError);
+program.parseAsync(process.argv).catch(handleError);
 //# sourceMappingURL=index.js.map