@probelabs/probe 0.6.0-rc208 → 0.6.0-rc209

package/build/agent/ProbeAgent.d.ts

@@ -68,9 +68,11 @@ export interface ProbeAgentOptions {
   disableMermaidValidation?: boolean;
   /** Disable automatic JSON validation and fixing (prevents infinite recursion in JsonFixingAgent) */
   disableJsonValidation?: boolean;
-  /** Enable agent skills discovery and activation */
+  /** Enable agent skills discovery and activation (disabled by default) */
+  allowSkills?: boolean;
+  /** @deprecated Use allowSkills instead. Enable agent skills discovery and activation (disabled by default) */
   enableSkills?: boolean;
-  /** Disable agent skills (overrides enableSkills) */
+  /** Disable agent skills (overrides allowSkills/enableSkills) */
   disableSkills?: boolean;
   /** Skill directories to scan relative to repo root */
   skillDirs?: string[];

package/build/agent/ProbeAgent.js

@@ -210,7 +210,8 @@ export class ProbeAgent {
     this.maxIterations = options.maxIterations || null;
     this.disableMermaidValidation = !!options.disableMermaidValidation;
     this.disableJsonValidation = !!options.disableJsonValidation;
-    this.enableSkills = options.disableSkills ? false : (options.enableSkills !== undefined ? !!options.enableSkills : true);
+    // Skills are disabled by default; enable via allowSkills or enableSkills
+    this.enableSkills = options.disableSkills ? false : !!(options.allowSkills || options.enableSkills);
     if (Array.isArray(options.skillDirs)) {
       this.skillDirs = options.skillDirs;
     } else if (typeof options.skillDirs === 'string') {

package/build/agent/index.js

@@ -58583,7 +58583,7 @@ var init_client = __esm({
             clientInfo.client.callTool({
               name: tool4.originalName,
               arguments: args
-            }),
+            }, void 0, { timeout }),
             timeoutPromise
           ]);
           const durationMs = Date.now() - startTime;
@@ -69138,7 +69138,7 @@ var init_ProbeAgent = __esm({
         this.maxIterations = options.maxIterations || null;
         this.disableMermaidValidation = !!options.disableMermaidValidation;
         this.disableJsonValidation = !!options.disableJsonValidation;
-        this.enableSkills = options.disableSkills ? false : options.enableSkills !== void 0 ? !!options.enableSkills : true;
+        this.enableSkills = options.disableSkills ? false : !!(options.allowSkills || options.enableSkills);
         if (Array.isArray(options.skillDirs)) {
           this.skillDirs = options.skillDirs;
         } else if (typeof options.skillDirs === "string") {
@@ -73115,8 +73115,8 @@ function parseArgs() {
     // Tool filtering: ['*'] = all, [] = none, ['tool1', 'tool2'] = specific
     disableTools: false,
     // Convenience flag to disable all tools
-    disableSkills: false,
-    // Disable skill discovery and activation
+    allowSkills: false,
+    // Enable skill discovery and activation (disabled by default)
     skillDirs: null,
     // Comma-separated list of repo-relative skill directories
     // Task management
@@ -73188,8 +73188,8 @@ function parseArgs() {
       }
     } else if (arg === "--disable-tools") {
       config.disableTools = true;
-    } else if (arg === "--no-skills") {
-      config.disableSkills = true;
+    } else if (arg === "--allow-skills") {
+      config.allowSkills = true;
     } else if (arg === "--skills-dir" && i + 1 < args.length) {
       config.skillDirs = args[++i].split(",").map((dir) => dir.trim()).filter(Boolean);
     } else if (arg === "--allow-tasks") {
@@ -73246,8 +73246,8 @@ Options:
                                    Supports exclusion: '*,!bash' (all except bash)
   --disable-tools                  Disable all tools (raw AI mode, no code analysis)
                                    Convenience flag equivalent to --allowed-tools none
+  --allow-skills                   Enable skill discovery and activation (disabled by default)
   --skills-dir <dirs>              Comma-separated list of repo-relative skill directories to scan
-  --no-skills                      Disable skill discovery and activation
   --allow-tasks                    Enable task management for tracking multi-step progress
   --verbose                        Enable verbose output
   --outline                        Use outline-xml format for code search results
@@ -73719,7 +73719,7 @@ async function main() {
       disableMermaidValidation: config.noMermaidValidation,
       allowedTools: config.allowedTools,
       disableTools: config.disableTools,
-      enableSkills: !config.disableSkills,
+      allowSkills: config.allowSkills,
       skillDirs: config.skillDirs,
       enableBash: config.enableBash,
       bashConfig,

package/build/agent/mcp/client.js

@@ -474,11 +474,12 @@ export class MCPClientManager {
       });
 
       // Race between the actual call and timeout
+      // Pass timeout to SDK's callTool to override its default 60s timeout
       const result = await Promise.race([
         clientInfo.client.callTool({
           name: tool.originalName,
           arguments: args
-        }),
+        }, undefined, { timeout }),
         timeoutPromise
       ]);
 

package/cjs/agent/ProbeAgent.cjs

@@ -85275,7 +85275,7 @@ var init_client2 = __esm({
             clientInfo.client.callTool({
               name: tool4.originalName,
               arguments: args
-            }),
+            }, void 0, { timeout }),
             timeoutPromise
           ]);
           const durationMs = Date.now() - startTime;
@@ -95829,7 +95829,7 @@ var init_ProbeAgent = __esm({
         this.maxIterations = options.maxIterations || null;
         this.disableMermaidValidation = !!options.disableMermaidValidation;
         this.disableJsonValidation = !!options.disableJsonValidation;
-        this.enableSkills = options.disableSkills ? false : options.enableSkills !== void 0 ? !!options.enableSkills : true;
+        this.enableSkills = options.disableSkills ? false : !!(options.allowSkills || options.enableSkills);
         if (Array.isArray(options.skillDirs)) {
           this.skillDirs = options.skillDirs;
         } else if (typeof options.skillDirs === "string") {

package/cjs/index.cjs

@@ -82879,7 +82879,7 @@ var init_client2 = __esm({
             clientInfo.client.callTool({
               name: tool4.originalName,
               arguments: args
-            }),
+            }, void 0, { timeout }),
             timeoutPromise
           ]);
           const durationMs = Date.now() - startTime;
@@ -93433,7 +93433,7 @@ var init_ProbeAgent = __esm({
         this.maxIterations = options.maxIterations || null;
         this.disableMermaidValidation = !!options.disableMermaidValidation;
         this.disableJsonValidation = !!options.disableJsonValidation;
-        this.enableSkills = options.disableSkills ? false : options.enableSkills !== void 0 ? !!options.enableSkills : true;
+        this.enableSkills = options.disableSkills ? false : !!(options.allowSkills || options.enableSkills);
         if (Array.isArray(options.skillDirs)) {
           this.skillDirs = options.skillDirs;
         } else if (typeof options.skillDirs === "string") {

package/index.d.ts

@@ -49,9 +49,11 @@ export interface ProbeAgentOptions {
   disableMermaidValidation?: boolean;
   /** Disable automatic JSON validation and fixing (prevents infinite recursion in JsonFixingAgent) */
   disableJsonValidation?: boolean;
-  /** Enable agent skills discovery and activation */
+  /** Enable agent skills discovery and activation (disabled by default) */
+  allowSkills?: boolean;
+  /** @deprecated Use allowSkills instead. Enable agent skills discovery and activation (disabled by default) */
   enableSkills?: boolean;
-  /** Disable agent skills (overrides enableSkills) */
+  /** Disable agent skills (overrides allowSkills/enableSkills) */
   disableSkills?: boolean;
   /** Skill directories to scan relative to repo root */
   skillDirs?: string[];

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@probelabs/probe",
-  "version": "0.6.0-rc208",
+  "version": "0.6.0-rc209",
   "description": "Node.js wrapper for the probe code search tool",
   "main": "src/index.js",
   "module": "src/index.js",

package/src/agent/ProbeAgent.d.ts

@@ -68,9 +68,11 @@ export interface ProbeAgentOptions {
   disableMermaidValidation?: boolean;
   /** Disable automatic JSON validation and fixing (prevents infinite recursion in JsonFixingAgent) */
   disableJsonValidation?: boolean;
-  /** Enable agent skills discovery and activation */
+  /** Enable agent skills discovery and activation (disabled by default) */
+  allowSkills?: boolean;
+  /** @deprecated Use allowSkills instead. Enable agent skills discovery and activation (disabled by default) */
   enableSkills?: boolean;
-  /** Disable agent skills (overrides enableSkills) */
+  /** Disable agent skills (overrides allowSkills/enableSkills) */
   disableSkills?: boolean;
   /** Skill directories to scan relative to repo root */
   skillDirs?: string[];

package/src/agent/ProbeAgent.js

@@ -210,7 +210,8 @@ export class ProbeAgent {
     this.maxIterations = options.maxIterations || null;
     this.disableMermaidValidation = !!options.disableMermaidValidation;
     this.disableJsonValidation = !!options.disableJsonValidation;
-    this.enableSkills = options.disableSkills ? false : (options.enableSkills !== undefined ? !!options.enableSkills : true);
+    // Skills are disabled by default; enable via allowSkills or enableSkills
+    this.enableSkills = options.disableSkills ? false : !!(options.allowSkills || options.enableSkills);
     if (Array.isArray(options.skillDirs)) {
       this.skillDirs = options.skillDirs;
     } else if (typeof options.skillDirs === 'string') {

package/src/agent/index.js

@@ -138,7 +138,7 @@ function parseArgs() {
     noMermaidValidation: false, // New flag to disable mermaid validation
     allowedTools: null, // Tool filtering: ['*'] = all, [] = none, ['tool1', 'tool2'] = specific
     disableTools: false, // Convenience flag to disable all tools
-    disableSkills: false, // Disable skill discovery and activation
+    allowSkills: false, // Enable skill discovery and activation (disabled by default)
     skillDirs: null, // Comma-separated list of repo-relative skill directories
     // Task management
     enableTasks: false, // Enable task tracking for progress management
@@ -212,8 +212,8 @@ function parseArgs() {
     } else if (arg === '--disable-tools') {
       // Convenience flag to disable all tools (raw AI mode)
       config.disableTools = true;
-    } else if (arg === '--no-skills') {
-      config.disableSkills = true;
+    } else if (arg === '--allow-skills') {
+      config.allowSkills = true;
     } else if (arg === '--skills-dir' && i + 1 < args.length) {
       config.skillDirs = args[++i].split(',').map(dir => dir.trim()).filter(Boolean);
     } else if (arg === '--allow-tasks') {
@@ -280,8 +280,8 @@ Options:
                                    Supports exclusion: '*,!bash' (all except bash)
   --disable-tools                  Disable all tools (raw AI mode, no code analysis)
                                    Convenience flag equivalent to --allowed-tools none
+  --allow-skills                   Enable skill discovery and activation (disabled by default)
   --skills-dir <dirs>              Comma-separated list of repo-relative skill directories to scan
-  --no-skills                      Disable skill discovery and activation
   --allow-tasks                    Enable task management for tracking multi-step progress
   --verbose                        Enable verbose output
   --outline                        Use outline-xml format for code search results
@@ -841,7 +841,7 @@ async function main() {
       disableMermaidValidation: config.noMermaidValidation,
       allowedTools: config.allowedTools,
       disableTools: config.disableTools,
-      enableSkills: !config.disableSkills,
+      allowSkills: config.allowSkills,
       skillDirs: config.skillDirs,
       enableBash: config.enableBash,
       bashConfig: bashConfig,

package/src/agent/mcp/client.js

@@ -474,11 +474,12 @@ export class MCPClientManager {
       });
 
       // Race between the actual call and timeout
+      // Pass timeout to SDK's callTool to override its default 60s timeout
       const result = await Promise.race([
         clientInfo.client.callTool({
           name: tool.originalName,
           arguments: args
-        }),
+        }, undefined, { timeout }),
         timeoutPromise
       ]);