@precisionutilityguild/liquid-shadow 1.0.9 → 1.0.11

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (41) hide show
  1. package/README.md +279 -62
  2. package/dist/data/migrations/000_baseline.sql +17 -0
  3. package/dist/data/migrations/014_tribunal_state.sql +24 -0
  4. package/dist/data/migrations/015_repo_level_handoffs_nullable.sql +52 -0
  5. package/dist/data/migrations/016_repair_tribunal_artifact_fk.sql +58 -0
  6. package/dist/entry/cli/index.js +1296 -928
  7. package/dist/entry/ember/index.js +313 -254
  8. package/dist/entry/mcp/server.js +1031 -808
  9. package/dist/entry/tribunal/index.js +685 -0
  10. package/dist/index.js +1008 -785
  11. package/dist/logic/domain/embeddings/worker.js +1 -1
  12. package/dist/logic/parser/index.js +16 -16
  13. package/dist/logic/parser/worker.js +1 -1
  14. package/dist/skills/shadow_audit/SKILL.md +22 -30
  15. package/dist/skills/shadow_chronicle/SKILL.md +16 -29
  16. package/dist/skills/shadow_continue/SKILL.md +37 -53
  17. package/dist/skills/shadow_coordinate/SKILL.md +46 -0
  18. package/dist/skills/shadow_crystallize/SKILL.md +13 -27
  19. package/dist/skills/shadow_mission/SKILL.md +27 -41
  20. package/dist/skills/shadow_onboard/SKILL.md +26 -35
  21. package/dist/skills/shadow_research/SKILL.md +15 -23
  22. package/dist/skills/shadow_sync/SKILL.md +18 -9
  23. package/dist/skills/shadow_synthesize/SKILL.md +14 -36
  24. package/dist/skills/shadow_trace_impact/SKILL.md +30 -50
  25. package/dist/skills/shadow_understand/SKILL.md +37 -52
  26. package/dist/skills/shadow_workspace/SKILL.md +44 -22
  27. package/dist/web-manifest.json +18 -7
  28. package/package.json +2 -1
  29. package/skills/shadow_audit/SKILL.md +22 -30
  30. package/skills/shadow_chronicle/SKILL.md +16 -29
  31. package/skills/shadow_continue/SKILL.md +37 -53
  32. package/skills/shadow_coordinate/SKILL.md +46 -0
  33. package/skills/shadow_crystallize/SKILL.md +13 -27
  34. package/skills/shadow_mission/SKILL.md +27 -41
  35. package/skills/shadow_onboard/SKILL.md +26 -35
  36. package/skills/shadow_research/SKILL.md +15 -23
  37. package/skills/shadow_sync/SKILL.md +18 -9
  38. package/skills/shadow_synthesize/SKILL.md +14 -36
  39. package/skills/shadow_trace_impact/SKILL.md +30 -50
  40. package/skills/shadow_understand/SKILL.md +37 -52
  41. package/skills/shadow_workspace/SKILL.md +44 -22
@@ -0,0 +1,685 @@
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+ var bt=Object.defineProperty;var K=(n,e)=>()=>(n&&(e=n(n=0)),e);var yt=(n,e)=>{for(var t in e)bt(n,t,{get:e[t],enumerable:!0})};import Tt from"pino";var Rt,St,p,D=K(()=>{"use strict";Rt={10:"TRACE",20:"DEBUG",30:"INFO",40:"WARN",50:"ERROR",60:"FATAL"},St=Tt({level:process.env.LOG_LEVEL||"warn",base:{service:"liquid-shadow"},formatters:{level(n,e){return{level:n,severity:Rt[e]??"INFO"}}},transport:{target:"pino-pretty",options:{colorize:!0,translateTime:"HH:MM:ss",destination:2,levelKey:"severity",messageKey:"message"}}}),p=St});import{existsSync as zt}from"node:fs";import{dirname as ge,join as $e,resolve as Yt}from"node:path";import{fileURLToPath as Kt}from"node:url";function Gt(){let n=Ue;for(;n!==ge(n);){if(zt($e(n,"package.json")))return n;n=ge(n)}return Yt(Ue,"..","..")}function Be(...n){return $e(Gt(),...n)}var qt,Ue,je=K(()=>{"use strict";qt=Kt(import.meta.url),Ue=ge(qt)});import{existsSync as ze}from"node:fs";import{cpus as Vt}from"node:os";import{dirname as Jt,join as Ye}from"node:path";import{fileURLToPath as Qt}from"node:url";import{Worker as Xt}from"node:worker_threads";function Zt(){if(qe.endsWith(".ts")){let e=Ye(Ke,"worker.ts");if(ze(e))return e}let n=Ye(Ke,"worker.js");return ze(n)?n:Be("dist/logic/domain/embeddings/worker.js")}function ne(n){return F||(F=new P(n)),F}async function Ge(){F&&(await F.shutdown(),F=null)}var qe,Ke,P,F,Ve=K(()=>{"use strict";je();D();qe=Qt(import.meta.url),Ke=Jt(qe);P=class{workers=[];taskQueue=[];pendingTasks=new Map;taskIdCounter=0;initialized=!1;initPromise;shutdownRequested=!1;numWorkers;cacheDir;initTimeout;constructor(e={}){this.numWorkers=e.numWorkers??Math.max(1,Math.min(2,Vt().length-1)),this.cacheDir=e.cacheDir??"./.cache",this.initTimeout=e.initTimeout??6e4}async initialize(){if(!this.initialized)return this.initPromise?this.initPromise:(this.initPromise=this._doInitialize(),this.initPromise)}async _doInitialize(){let e;try{p.info({numWorkers:this.numWorkers},"Initializing embedding worker pool");let 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ii(){p.info({model:se,dtype:$},"Loading embedding model...");let{pipeline:n}=await ei(),e=Je(!1);try{return await n("feature-extraction",se,e)}catch(t){let i=t?.message||"";if(!(i.includes("/onnx/model_quantized.onnx")||i.includes("model_quantized.onnx")))throw t;return p.warn({model:se,dtype:$},"Quantized ONNX artifact missing, retrying with unquantized ONNX"),await n("feature-extraction",se,Je(!0))}}async function Xe(){return Ee||(Ee=ii()),Ee}async function ni(n){try{let t=await(await Xe())(n,{pooling:"mean",normalize:!0});return Array.from(t.data)}catch(e){return p.error({err:e},"Failed to generate embedding"),null}}async function si(n,e=Qe,t){return n.length===0?[]:be?ne().generateEmbeddings(n,e,t):Ze(n,e,t)}async function Ze(n,e,t){let i=new Array(n.length).fill(null),s=await Xe();for(let r=0;r<n.length;r+=e){let l=Math.min(r+e,n.length),c=n.slice(r,l);try{let a=await s(c,{pooling:"mean",normalize:!0}),[o,u]=a.dims;for(let d=0;d<o;d++){let 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from"fs";import G from"path";D();import w from"fs";import q from"path";import{fileURLToPath as Lt}from"url";var L=p.child({module:"migrations"}),Nt=Lt(import.meta.url),It=q.dirname(Nt);function Ot(){let n=It;if(w.readdirSync(n).some(i=>i.match(/^\d{3}_.*\.sql$/)))return n;let t=q.resolve(n,"../../data/migrations");return w.existsSync(t)&&w.readdirSync(t).some(i=>i.match(/^\d{3}_.*\.sql$/))?t:n}function Ct(n){n.exec(`
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+ CREATE TABLE IF NOT EXISTS schema_migrations (
3
+ version INTEGER PRIMARY KEY,
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+ name TEXT NOT NULL,
5
+ applied_at REAL DEFAULT (unixepoch())
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+ );
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+ `)}function wt(n){Ct(n);let e=n.prepare("SELECT version FROM schema_migrations ORDER BY version").all();return new Set(e.map(t=>t.version))}function xt(n){return w.readdirSync(n).filter(t=>t.match(/^\d{3}_.*\.sql$/)&&!t.startsWith("000_")).sort().map(t=>{let i=t.match(/^(\d{3})_(.+)\.sql$/),s=parseInt(i[1],10),r=i[2],c=w.readFileSync(q.join(n,t),"utf-8").split(/^-- DOWN$/m);return{version:s,name:r,up:c[0].trim(),down:c[1]?.trim()}})}function At(n,e){L.info({version:e.version,name:e.name},"Applying migration"),n.transaction(()=>{n.exec(e.up),n.prepare("INSERT INTO schema_migrations (version, name) VALUES (?, ?)").run(e.version,e.name)})(),L.info({version:e.version},"Migration applied successfully")}function vt(n,e,t){let i=q.join(e,"000_baseline.sql");if(!w.existsSync(i)){L.warn("000_baseline.sql not found \u2014 falling back to incremental migrations");return}L.info("Fresh database detected \u2014 applying consolidated baseline schema");let s=w.readFileSync(i,"utf-8");n.transaction(()=>{n.exec(s);let r=n.prepare("INSERT OR IGNORE INTO schema_migrations (version, name) VALUES (?, ?)");for(let l of t)r.run(l.version,l.name)})(),L.info({stamped:t.length},"Baseline applied \u2014 incremental migrations stamped")}function Me(n){let e=wt(n),t=Ot(),i=xt(t);if(e.size===0){vt(n,t,i);return}let s=i.filter(r=>!e.has(r.version));if(s.length===0){L.debug("No pending migrations");return}L.info({count:s.length},"Running pending migrations");for(let r of s)At(n,r);L.info("All migrations complete")}import kt from"os";var k=p.child({module:"db"});function he(n){let e=kt.homedir(),t=G.join(e,".mcp-liquid-shadow"),i=G.join(t,"dbs");De.existsSync(i)||De.mkdirSync(i,{recursive:!0});let s=Dt.createHash("sha256").update(n).digest("hex").substring(0,12),l=`${G.basename(n).replace(/[^a-zA-Z0-9-_]/g,"_")}_${s}.db`;return G.join(i,l)}function Ft(n,e){let t=e||he(n);k.debug({repoPath:n,dbPath:t},"Initializing database");let i=new Mt(t);return i.pragma("journal_mode = WAL"),i.pragma("busy_timeout = 5000"),Me(i),V.set(n,t),N.set(t,i),k.debug({repoPath:n,dbPath:t},"Database initialized successfully"),i}var N=new Map,V=new Map;function H(n){let e=V.get(n)||he(n),t=N.get(e);if(t){if(t.open)return t;N.delete(e)}let i=Ft(n);return N.set(e,i),i}function ke(n){let e=V.get(n)||he(n),t=N.get(e);t&&(t.open&&(k.debug({repoPath:n,dbPath:e},"Closing database connection"),t.close()),N.delete(e)),V.delete(n)}function Fe(){for(let[n,e]of N.entries())try{e.open&&(k.debug({dbPath:n},"Closing database connection"),e.close())}catch(t){k.error({dbPath:n,err:t},"Error closing database execution")}N.clear()}process.on("exit",()=>Fe());var We=n=>{k.debug({signal:n},"Received termination signal, closing databases"),Fe(),process.exit(0)};process.on("SIGINT",()=>We("SIGINT"));process.on("SIGTERM",()=>We("SIGTERM"));var f=class{db;constructor(e){this.db=e}get database(){return this.db}all(e,...t){return this.db.prepare(e).all(...t)}get(e,...t){return this.db.prepare(e).get(...t)}run(e,...t){return this.db.prepare(e).run(...t).changes}insert(e,...t){return this.db.prepare(e).run(...t).lastInsertRowid}transaction(e){return this.db.transaction(e)()}};var J=class extends f{claimFile(e,t){try{this.run(`
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+ INSERT INTO file_claims (file_path, mission_id, claimed_at, updated_at)
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+ VALUES (?, ?, unixepoch(), unixepoch())
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+ `,e,t);let i=this.getClaim(e);if(!i)throw new Error(`Failed to hydrate claim after insert for file ${e}`);return{status:"claimed",claim:i}}catch{let i=this.getClaim(e);if(!i)throw new Error(`Failed to read existing claim for file ${e}`);return i.mission_id===t?(this.run("UPDATE file_claims SET updated_at = unixepoch() WHERE file_path = ?",e),{status:"already_claimed",claim:this.getClaim(e)??i}):{status:"conflict",claim:i}}}releaseFile(e,t){let i=this.getClaim(e);return i?t!==void 0&&i.mission_id!==t?{released:!1,reason:"not_owner",claim:i}:(this.run("DELETE FROM file_claims WHERE file_path = ?",e),{released:!0}):{released:!1,reason:"not_found"}}releaseAllForMission(e){return this.run("DELETE FROM file_claims WHERE mission_id = ?",e)}getClaim(e){return this.get(`
11
+ SELECT
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+ fc.file_path,
13
+ fc.mission_id,
14
+ fc.claimed_at,
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+ fc.updated_at,
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+ m.name AS mission_name,
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+ m.status AS mission_status,
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+ m.git_branch AS mission_branch
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+ FROM file_claims fc
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+ LEFT JOIN missions m ON m.id = fc.mission_id
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+ WHERE fc.file_path = ?
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+ `,e)}getClaimsForMission(e){return this.all(`
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+ SELECT
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+ fc.file_path,
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+ fc.claimed_at,
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+ fc.updated_at,
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+ m.status AS mission_status,
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+ m.git_branch AS mission_branch
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+ FROM file_claims fc
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+ LEFT JOIN missions m ON m.id = fc.mission_id
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+ WHERE fc.mission_id = ?
34
+ ORDER BY fc.file_path ASC
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+ `,e)}listClaims(){return this.all(`
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+ SELECT
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+ fc.file_path,
38
+ fc.mission_id,
39
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40
+ fc.updated_at,
41
+ m.name AS mission_name,
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+ m.status AS mission_status,
43
+ m.git_branch AS mission_branch
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+ FROM file_claims fc
45
+ LEFT JOIN missions m ON m.id = fc.mission_id
46
+ ORDER BY fc.updated_at DESC, fc.file_path ASC
47
+ `)}getClaimsByFiles(e){if(e.length===0)return[];let t=e.map(()=>"?").join(", ");return this.all(`
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49
+ fc.file_path,
50
+ fc.mission_id,
51
+ fc.claimed_at,
52
+ fc.updated_at,
53
+ m.name AS mission_name,
54
+ m.status AS mission_status,
55
+ m.git_branch AS mission_branch
56
+ FROM file_claims fc
57
+ LEFT JOIN missions m ON m.id = fc.mission_id
58
+ WHERE fc.file_path IN (${t})
59
+ ORDER BY fc.file_path ASC
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+ `,...e)}};var Q=class extends f{findByKey(e,t=20){return this.all(`
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+ SELECT file_path, key, value, kind
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+ FROM configs
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+ WHERE key LIKE ? OR value LIKE ?
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+ LIMIT ?
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+ `,`%${e}%`,`%${e}%`,t)}findByKind(e,t=50){let i="SELECT key, value, kind, file_path FROM configs",s=[];return e&&(i+=" WHERE kind = ?",s.push(e)),i+=" LIMIT ?",s.push(t),this.all(i,...s)}findEnvValue(e){return this.get("SELECT value FROM configs WHERE key LIKE ? OR key = ? LIMIT 1",`%:env:${e}`,e)?.value}countByKind(e){return this.get("SELECT COUNT(*) as count FROM configs WHERE kind = ?",e)?.count||0}getAll(){return this.all("SELECT key, value, kind, file_path FROM configs")}};var X=class extends f{search(e,t=10){return this.all(`
66
+ SELECT file_path, snippet(content_fts, 1, '<b>', '</b>', '...', 20) as snippet
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+ FROM content_fts
68
+ WHERE content_fts MATCH ?
69
+ LIMIT ?
70
+ `,e,t)}};var Z=class n extends f{static HTTP_METHOD_EXPORTS=new Set(["GET","POST","PUT","PATCH","DELETE","HEAD","OPTIONS"]);findByNameAndFile(e,t){return this.all("SELECT * FROM exports WHERE file_path = ? AND name = ?",t,e)}findByNameGlobal(e){return this.all("SELECT * FROM exports WHERE name = ?",e)}findTopLevelByNameGlobal(e){return this.all("SELECT * FROM exports WHERE name = ? AND parent_id IS NULL",e)}findAtLine(e,t){return this.get(`
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+ SELECT * FROM exports
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+ WHERE file_path = ? AND start_line <= ? AND end_line >= ?
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+ ORDER BY (end_line - start_line) ASC -- Get innermost symbol
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+ LIMIT 1
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+ `,e,t,t)}findById(e){return this.get("SELECT * FROM exports WHERE id = ?",e)}findHydratedById(e){let t=this.findById(e);if(!t)return;let i=this.all(`
76
+ SELECT id, mission_id, type, content, created_at, confidence, is_crystallized, crystal_id
77
+ FROM intent_logs
78
+ WHERE symbol_id = ?
79
+ ORDER BY created_at DESC
80
+ LIMIT 10
81
+ `,e),r=this.get("SELECT COUNT(*) as count FROM intent_logs WHERE symbol_id = ?",e)?.count||0,l=this.all(`
82
+ SELECT m.id, m.name, m.status
83
+ FROM missions m
84
+ JOIN working_set ws ON ws.mission_id = m.id
85
+ WHERE ws.symbol_id = ?
86
+ AND m.status IN ('in-progress', 'planned', 'verifying')
87
+ GROUP BY m.id
88
+ `,e);return{...t,recent_intents:i,intent_log_count:r,active_missions:l}}findRoutesByCapability(e){return this.all(`
89
+ SELECT name, file_path, signature
90
+ FROM exports
91
+ WHERE kind = 'HTTP Route'
92
+ AND capabilities LIKE ?
93
+ `,`%${e}%`)}findRoutesByToken(e,t=5){return this.all(`
94
+ SELECT *
95
+ FROM exports
96
+ WHERE (kind = 'HTTP Route' OR classification = 'Service Boundary')
97
+ AND (name LIKE ? OR signature LIKE ?)
98
+ LIMIT ?
99
+ `,`%${e}%`,`%${e}%`,t)}findByFile(e){return this.all("SELECT * FROM exports WHERE file_path = ? ORDER BY start_line ASC",e)}findByFiles(e){if(e.length===0)return[];let t=e.map(()=>"?").join(", ");return this.all(`SELECT * FROM exports WHERE file_path IN (${t}) ORDER BY file_path, start_line ASC`,...e)}findWithEmbeddings(e=5e3){return this.all(`
100
+ SELECT *
101
+ FROM exports
102
+ WHERE embedding IS NOT NULL
103
+ ORDER BY file_path, start_line
104
+ LIMIT ?
105
+ `,e)}findSiblings(e){return this.all(`
106
+ SELECT name, kind, signature, start_line, end_line,
107
+ parent_id, id,
108
+ (SELECT name FROM exports WHERE id = e.parent_id) as parent_name
109
+ FROM exports e
110
+ WHERE file_path = ?
111
+ AND parent_id IS NULL
112
+ ORDER BY start_line ASC
113
+ `,e)}findByName(e,t=20){return this.all("SELECT * FROM exports WHERE name = ? LIMIT ?",e,t)}findClassByName(e){return this.get("SELECT * FROM exports WHERE name = ? AND kind = 'ClassDeclaration' LIMIT 1",e)}findDefinitionCandidates(e,t){let i=[e],s=`
114
+ SELECT e.id, e.name, e.kind, e.start_line, e.end_line, e.signature, e.doc,
115
+ f.path as file_path, e.classification, e.capabilities,
116
+ p.name as parent_name, p.kind as parent_kind
117
+ FROM exports e
118
+ JOIN files f ON e.file_path = f.path
119
+ LEFT JOIN exports p ON e.parent_id = p.id
120
+ WHERE e.name = ?
121
+ `;return t&&(s+=" AND f.path = ?",i.push(t)),s+=`
122
+ ORDER BY
123
+ CASE WHEN e.parent_id IS NULL THEN 0 ELSE 1 END,
124
+ CASE WHEN e.kind = 'ExportSpecifier' THEN 2 ELSE 0 END
125
+ LIMIT 10
126
+ `,this.all(s,...i)}findMemberCandidates(e,t,i){let s=[e,t],r=`
127
+ SELECT e.id, e.name, e.kind, e.start_line, e.end_line, e.signature, e.doc,
128
+ f.path as file_path, e.classification, e.capabilities,
129
+ p.name as parent_name, p.kind as parent_kind
130
+ FROM exports e
131
+ JOIN files f ON e.file_path = f.path
132
+ LEFT JOIN exports p ON e.parent_id = p.id
133
+ WHERE p.name = ? AND e.name = ?
134
+ `;return i&&(r+=" AND f.path = ?",s.push(i)),r+=`
135
+ ORDER BY
136
+ CASE WHEN e.parent_id IS NULL THEN 0 ELSE 1 END,
137
+ CASE WHEN e.kind = 'ExportSpecifier' THEN 2 ELSE 0 END
138
+ LIMIT 10
139
+ `,this.all(r,...s)}findPotentialParents(e){return this.all(`
140
+ SELECT name, kind, file_path
141
+ FROM exports
142
+ WHERE kind IN ('ClassDeclaration', 'ClassExpression', 'TsInterfaceDeclaration')
143
+ AND id IN (
144
+ SELECT rowid FROM content_fts WHERE content MATCH ?
145
+ )
146
+ LIMIT 3
147
+ `,`"${e}"`)}findFuzzyCandidates(e){let t=e.charAt(0).toLowerCase();return this.all(`
148
+ SELECT DISTINCT name FROM exports
149
+ WHERE parent_id IS NULL
150
+ AND (name LIKE ? OR name LIKE ? OR ABS(LENGTH(name) - LENGTH(?)) <= 5)
151
+ ORDER BY ABS(LENGTH(name) - LENGTH(?)) ASC
152
+ LIMIT 1000
153
+ `,t+"%","%"+t+"%",e,e)}findTopLevelByFile(e){return this.all(`
154
+ SELECT * FROM exports
155
+ WHERE file_path = ? AND parent_id IS NULL
156
+ ORDER BY start_line ASC
157
+ `,e)}findFts(e,t=20){return this.all(`
158
+ SELECT e.*
159
+ FROM exports e
160
+ JOIN exports_fts ON e.id = exports_fts.rowid
161
+ WHERE exports_fts MATCH ?
162
+ LIMIT ?
163
+ `,e,t)}findByPartialName(e,t=20){return this.all(`
164
+ SELECT * FROM exports
165
+ WHERE lower(name) LIKE ?
166
+ LIMIT ?
167
+ `,`%${e.toLowerCase()}%`,t)}getAllNames(e=5e3){return this.all("SELECT DISTINCT name FROM exports WHERE parent_id IS NULL LIMIT ?",e).map(i=>i.name)}countByFile(e){return this.get("SELECT COUNT(*) as count FROM exports WHERE file_path = ?",e)?.count||0}findDeadExports(e={}){let{limit:t=50,includeTests:i=!1,includeMigrations:s=!1,includeFixtures:r=!1,excludePatterns:l=[],confidenceThreshold:c="all"}=e,a=[];i||(a.push("e.file_path NOT LIKE '%/test/%'"),a.push("e.file_path NOT LIKE '%/tests/%'"),a.push("e.file_path NOT LIKE '%/__tests__/%'"),a.push("e.file_path NOT LIKE '%.spec.%'"),a.push("e.file_path NOT LIKE '%.test.%'")),s||(a.push("e.file_path NOT LIKE '%/migrations/%'"),a.push("e.file_path NOT LIKE '%/migration/%'"),a.push("e.file_path NOT LIKE '%Migration.%'")),r||(a.push("e.file_path NOT LIKE '%/__fixtures__/%'"),a.push("e.file_path NOT LIKE '%/__mocks__/%'"),a.push("e.file_path NOT LIKE '%/fixtures/%'"),a.push("e.file_path NOT LIKE '%/mocks/%'"),a.push("e.file_path NOT LIKE '%.fixture.%'"),a.push("e.file_path NOT LIKE '%.mock.%'")),a.push("e.file_path NOT LIKE '%/dist/%'"),a.push("e.file_path NOT LIKE '%/build/%'"),a.push("e.file_path NOT LIKE '%/.next/%'"),a.push("e.file_path NOT LIKE '%/.nuxt/%'"),a.push("e.file_path NOT LIKE '%/.cache/%'"),a.push("e.file_path NOT LIKE '%/coverage/%'"),a.push("e.file_path NOT LIKE '%/node_modules/%'"),a.push("e.file_path NOT LIKE '%/storage/runtime/%'"),a.push("e.file_path NOT LIKE '%/compiled_templates/%'"),a.push("e.file_path NOT LIKE '%/compiled_classes/%'"),a.push("e.file_path NOT LIKE '%.generated.%'"),a.push("e.file_path NOT LIKE '%.gen.%'");for(let h of l){let S=h.replace(/\*\*/g,"%").replace(/\*/g,"%").replace(/\?/g,"_");a.push(`e.file_path NOT LIKE '${S}'`)}let o=a.length>0?`AND ${a.join(" AND ")}`:"",m=this.all(`
168
+ SELECT e.name, e.kind, e.file_path, e.start_line
169
+ FROM exports e
170
+ WHERE e.kind IN (
171
+ 'FunctionDeclaration', 'ClassDeclaration',
172
+ 'TsInterfaceDeclaration', 'TsTypeAliasDeclaration', 'TsEnumDeclaration',
173
+ 'ArrowFunctionExpression', 'FunctionExpression'
174
+ )
175
+ AND e.parent_id IS NULL
176
+ ${o}
177
+ AND NOT EXISTS (
178
+ SELECT 1
179
+ FROM imports i
180
+ WHERE REPLACE(i.imported_symbols, ' ', '') = e.name
181
+ OR REPLACE(i.imported_symbols, ' ', '') LIKE e.name || ',%'
182
+ OR REPLACE(i.imported_symbols, ' ', '') LIKE '%,' || e.name
183
+ OR REPLACE(i.imported_symbols, ' ', '') LIKE '%,' || e.name || ',%'
184
+ )
185
+ AND NOT EXISTS (SELECT 1 FROM imports i WHERE i.resolved_path = e.file_path AND i.imported_symbols LIKE '%*%')
186
+ ORDER BY e.file_path, e.start_line
187
+ LIMIT ?
188
+ `,t*2).filter(h=>!this.isFrameworkEntrypointExport(h)).map(h=>{let{confidence:S,reason:C}=this.scoreDeadExportConfidence(h);return{...h,confidence:S,reason:C}}),b=m;return c==="high"?b=m.filter(h=>h.confidence==="high"):c==="medium"&&(b=m.filter(h=>h.confidence==="high"||h.confidence==="medium")),b.slice(0,t)}scoreDeadExportConfidence(e){let t=e.file_path.toLowerCase(),i=e.name;return t.includes("/index.")||t.endsWith("index.ts")||t.endsWith("index.js")?{confidence:"low",reason:"Barrel/index file - likely re-export"}:e.kind==="TsInterfaceDeclaration"||e.kind==="TsTypeAliasDeclaration"?{confidence:"medium",reason:"Type definition - may be used externally"}:t.includes("/entry/")||t.includes("/bin/")||t.includes("main.")||t.includes("server.")||t.includes("cli.")?{confidence:"medium",reason:"Entry point - may be invoked externally"}:(t.includes("/components/")||t.endsWith(".tsx")||t.endsWith(".jsx"))&&/^[A-Z][A-Za-z0-9_]*$/.test(i)?{confidence:"medium",reason:"Component export - may be used by runtime composition"}:(t.includes("/contexts/")||t.includes("/context/"))&&(/Provider$/.test(i)||i.startsWith("use"))?{confidence:"medium",reason:"Context/provider export - may be wired dynamically"}:i.startsWith("create")||i.endsWith("Factory")||i.endsWith("Builder")?{confidence:"medium",reason:"Factory/builder pattern - may be used dynamically"}:i.startsWith("use")&&i.length>3?{confidence:"medium",reason:"Hook pattern - may be used in components"}:{confidence:"high",reason:"No detected usage"}}isFrameworkEntrypointExport(e){let i=e.file_path.toLowerCase().replace(/\\/g,"/"),s=e.name;return!!(/(^|\/)(src\/)?app\/.*\/route\.(t|j)sx?$/.test(i)&&n.HTTP_METHOD_EXPORTS.has(s)||/(^|\/)(src\/)?app\/.*\/(page|layout|loading|error|not-found|default|template)\.(t|j)sx?$/.test(i)||/(^|\/)(src\/)?middleware\.(t|j)sx?$/.test(i)||i.includes("/app/exceptions/handler.php")||i.includes("/app/http/middleware/")||i.includes("/app/providers/")||i.includes("/app/console/commands/")||i.includes("/database/seeds/")||i.includes("/config/")&&i.endsWith(".php")||i.includes("/routes/")&&["loader","action","meta","headers"].includes(s))}getGravityMap(e=[],t){let i={},s=`
189
+ SELECT ws.symbol_id, m.name as mission_name, m.status
190
+ FROM working_set ws
191
+ JOIN missions m ON ws.mission_id = m.id
192
+ WHERE (
193
+ (m.status IN ('in-progress', 'verifying') ${t?"AND m.git_branch = ?":""})
194
+ OR m.id IN (${e.length>0?e.join(","):"-1"})
195
+ )
196
+ AND ws.symbol_id IS NOT NULL
197
+ `,r=[];t&&r.push(t);let l=this.all(s,...r);for(let o of l){i[o.symbol_id]||(i[o.symbol_id]={score:1,reasons:[]});let u=o.status==="in-progress"||o.status==="verifying"?1:.5;i[o.symbol_id].score+=u;let d=o.status==="in-progress"||o.status==="verifying"?"Working Set":"Lineage Bleed";i[o.symbol_id].reasons.push(`${d}: ${o.mission_name}`)}let c=Math.floor(Date.now()/1e3)-86400,a=this.all(`
198
+ SELECT symbol_id, type, mission_id
199
+ FROM intent_logs
200
+ WHERE (created_at > ? OR mission_id IN (${e.length>0?e.join(","):"-1"}))
201
+ AND symbol_id IS NOT NULL
202
+ ORDER BY created_at DESC
203
+ LIMIT 200
204
+ `,c);for(let o of a){i[o.symbol_id]||(i[o.symbol_id]={score:1,reasons:[]});let u=o.mission_id?e.includes(o.mission_id):!1,d=u?.1:.2;i[o.symbol_id].score<5&&(i[o.symbol_id].score+=d);let m=u?`Lineage Intent: ${o.type}`:`Recent Intent: ${o.type}`;!i[o.symbol_id].reasons.includes(m)&&i[o.symbol_id].reasons.length<5&&i[o.symbol_id].reasons.push(m)}return i}getCount(){return this.get("SELECT COUNT(*) as count FROM exports")?.count||0}getKindDistribution(e=5){return this.all(`
205
+ SELECT kind, COUNT(*) as c
206
+ FROM exports
207
+ WHERE kind IS NOT NULL AND kind != ''
208
+ GROUP BY kind
209
+ ORDER BY c DESC
210
+ LIMIT ?
211
+ `,e)}getWithEmbeddingsCount(){return this.get("SELECT COUNT(*) as count FROM exports WHERE embedding IS NOT NULL")?.count||0}findByMethodName(e){return this.all(`
212
+ SELECT * FROM exports
213
+ WHERE name = ?
214
+ OR name LIKE ?
215
+ OR name LIKE ?
216
+ LIMIT 10
217
+ `,e,`%.${e}`,`%::${e}`)}findTypeGraphEdges(e,t={}){let{filePath:i,direction:s="both",relationship:r,limit:l=50}=t,c=Math.max(1,Math.min(l,500)),a=[];if(s==="both"||s==="outbound"){let o=`
218
+ SELECT
219
+ id,
220
+ file_path,
221
+ source_symbol_id,
222
+ source_symbol_name,
223
+ target_symbol_name,
224
+ relationship,
225
+ line_number,
226
+ metadata,
227
+ 'outbound' AS direction
228
+ FROM type_graph_edges
229
+ WHERE source_symbol_name = ?
230
+ `,u=[e];i&&(o+=" AND file_path = ?",u.push(i)),r&&(o+=" AND relationship = ?",u.push(r)),o+=" ORDER BY file_path ASC, line_number ASC, target_symbol_name ASC LIMIT ?",u.push(c),a.push(...this.all(o,...u))}if(s==="both"||s==="inbound"){let o=`
231
+ SELECT
232
+ id,
233
+ file_path,
234
+ source_symbol_id,
235
+ source_symbol_name,
236
+ target_symbol_name,
237
+ relationship,
238
+ line_number,
239
+ metadata,
240
+ 'inbound' AS direction
241
+ FROM type_graph_edges
242
+ WHERE target_symbol_name = ?
243
+ `,u=[e];r&&(o+=" AND relationship = ?",u.push(r)),o+=" ORDER BY file_path ASC, line_number ASC, source_symbol_name ASC LIMIT ?",u.push(c),a.push(...this.all(o,...u))}return a.slice(0,c)}findTypeGraphEdgesBySymbolId(e,t={}){let i=this.findById(e);return i?this.findTypeGraphEdges(i.name,{...t,filePath:i.file_path}):[]}};import jt from"path";var Wt=new Set(["any","unknown","never","void","null","undefined","string","number","boolean","symbol","object","bigint","readonly","keyof","infer","extends","implements","class","interface","type","function","new"]);function Ht(n,e){if(!n)return!1;let t=n.trim();return!t||Wt.has(t.toLowerCase())||e.has(t)?!1:/^[A-Za-z_$][A-Za-z0-9_$.]*$/.test(t)}function Pt(n){return n.split(/[,|&]/).map(e=>e.trim()).filter(Boolean)}function Ut(n){let e=n.replace(/^[({[]+/,"").replace(/[)}\]]+$/,"").replace(/^readonly\s+/,"").trim();return e&&e.match(/^([A-Za-z_$][A-Za-z0-9_$.]*)/)?.[1]||null}function $t(n){let e=[],t=0,i="",s=!1;for(let r of n){if(r==="<"&&(t++,t===1)){s=!0,i="";continue}if(r===">"&&(t>0&&t--,t===0&&s)){s=!1,i.trim()&&e.push(i),i="";continue}s&&(i+=r)}return e}function Bt(n){let e=new Set;for(let t of n){let i=t.split(",").map(s=>s.trim());for(let s of i){let r=s.match(/^([A-Za-z_$][A-Za-z0-9_$]*)/);r?.[1]&&e.add(r[1])}}return e}function fe(n,e){let t=[];for(let i of Pt(n)){let s=Ut(i);s&&Ht(s,e)&&t.push(s)}return t}function He(n){if(!n)return[];let e=n.replace(/\s+/g," ").trim();if(!e)return[];let t=$t(e),i=Bt(t),s=[],r=new Set,l=(o,u,d)=>{let m=`${o}:${u}`;r.has(m)||(r.add(m),s.push({relationship:o,targetName:u,...d?{metadata:d}:{}}))},c=e.match(/\bextends\s+(.+?)(?=\bimplements\b|\{|=|$)/);if(c?.[1]){let o=fe(c[1],i);for(let u of o)l("extends",u,c[1].trim())}let a=e.match(/\bimplements\s+(.+?)(?=\{|=|$)/);if(a?.[1]){let o=fe(a[1],i);for(let u of o)l("implements",u,a[1].trim())}for(let o of t){let u=/([A-Za-z_$][A-Za-z0-9_$]*)\s+extends\s+([^,>]+)/g,d=null;for(;(d=u.exec(o))!==null;){let m=d[2]?.trim();if(!m)continue;let b=fe(m,i);for(let h of b)l("constrained_by",h,m)}}return s}var ee=class extends f{findByPath(e){return this.get("SELECT * FROM files WHERE path = ?",e)}findAll(e){let t="SELECT * FROM files ORDER BY path ASC";return e&&(t+=` LIMIT ${e}`),this.all(t)}getAllPaths(){return this.all("SELECT path FROM files").map(t=>t.path)}findInSubPath(e,t){let i=jt.resolve(e,t),s=i.endsWith("/")?i:i+"/";return this.all(`
244
+ SELECT * FROM files
245
+ WHERE (path LIKE ? OR path = ?)
246
+ ORDER BY path ASC
247
+ `,`${s}%`,i)}findWithEmbeddings(){return this.all("SELECT * FROM files WHERE embedding IS NOT NULL")}findFts(e,t=10){return this.all(`
248
+ SELECT files.*, files_fts.rank
249
+ FROM files_fts
250
+ JOIN files ON files.rowid = files_fts.rowid
251
+ WHERE files_fts MATCH ?
252
+ ORDER BY rank
253
+ LIMIT ?
254
+ `,e,t)}findByPathKeywords(e,t=10){let i=e.map(()=>"LOWER(path) LIKE ?").join(" OR ");return this.all(`
255
+ SELECT * FROM files
256
+ WHERE ${i}
257
+ LIMIT ?
258
+ `,...e.map(s=>`%${s}%`),t)}findContentFts(e,t=50){let i=this.buildContentFtsQuery(e);return i?this.all(`
259
+ SELECT
260
+ files.*,
261
+ bm25(content_fts, 0.2, 1.0) AS bm25_rank
262
+ FROM content_fts
263
+ JOIN files ON files.path = content_fts.file_path
264
+ WHERE content_fts MATCH ?
265
+ ORDER BY bm25_rank ASC
266
+ LIMIT ?
267
+ `,i,Math.max(1,Math.min(t,1e3))):[]}getContent(e){return this.get("SELECT content FROM file_content WHERE file_path = ?",e)?.content}findContentByToken(e,t=10){return this.all(`
268
+ SELECT file_path
269
+ FROM content_fts
270
+ WHERE content_fts MATCH ?
271
+ AND (file_path LIKE '%.ts' OR file_path LIKE '%.tsx' OR file_path LIKE '%.js' OR file_path LIKE '%.py' OR file_path LIKE '%.php')
272
+ AND file_path NOT LIKE '%/test/%'
273
+ AND file_path NOT LIKE '%.spec.%'
274
+ LIMIT ?
275
+ `,`"${e.replace(/[^a-zA-Z0-9_/]/g," ")}"`,t).map(s=>s.file_path)}findSynapses(e){let t="SELECT * FROM event_synapses WHERE 1=1",i=[];if(e.type&&(t+=" AND type = ?",i.push(e.type)),e.name){let s=e.name;s.startsWith("/")&&(s=s.substring(1)),s.endsWith("/")&&(s=s.substring(0,s.length-1)),s.length>0&&(t+=" AND (name LIKE ? OR name LIKE ? OR name = ?)",i.push(`${s}%`),i.push(`%/${s}%`),i.push(e.name))}return e.direction&&(t+=" AND direction = ?",i.push(e.direction)),t+=` LIMIT ${e.limit||50}`,this.all(t,...i)}exists(e){return!!this.get("SELECT 1 FROM files WHERE path = ?",e)}update(e,t){let i=Object.keys(t);if(i.length===0)return;let s=i.map(l=>`${l} = ?`).join(", "),r=Object.values(t);r.push(e),this.run(`UPDATE files SET ${s} WHERE path = ?`,...r)}getStats(){let e=this.get(`
276
+ SELECT
277
+ COUNT(*) as total,
278
+ SUM(CASE WHEN summary IS NOT NULL AND summary != '' THEN 1 ELSE 0 END) as withSummary
279
+ FROM files
280
+ `);return{total:e?.total||0,withSummary:e?.withSummary||0}}getGravityMap(e=[],t){let i={},s=`
281
+ SELECT ws.file_path, m.name as mission_name, m.status
282
+ FROM working_set ws
283
+ JOIN missions m ON ws.mission_id = m.id
284
+ WHERE (
285
+ (m.status IN ('in-progress', 'verifying') ${t?"AND m.git_branch = ?":""})
286
+ OR m.id IN (${e.length>0?e.join(","):"-1"})
287
+ )
288
+ AND ws.file_path IS NOT NULL
289
+ `,r=[];t&&r.push(t);let l=this.all(s,...r);for(let o of l){i[o.file_path]||(i[o.file_path]={score:1,reasons:[]});let u=o.status==="in-progress"||o.status==="verifying"?1:.5;i[o.file_path].score+=u;let d=o.status==="in-progress"||o.status==="verifying"?"Working Set":"Lineage Bleed";i[o.file_path].reasons.push(`${d}: ${o.mission_name}`)}let c=Math.floor(Date.now()/1e3)-86400,a=this.all(`
290
+ SELECT file_path, type, mission_id
291
+ FROM intent_logs
292
+ WHERE (created_at > ? OR mission_id IN (${e.length>0?e.join(","):"-1"}))
293
+ AND file_path IS NOT NULL
294
+ ORDER BY created_at DESC
295
+ LIMIT 100
296
+ `,c);for(let o of a){i[o.file_path]||(i[o.file_path]={score:1,reasons:[]});let u=o.mission_id?e.includes(o.mission_id):!1,d=u?.1:.2;i[o.file_path].score<5&&(i[o.file_path].score+=d);let m=u?`Lineage Intent: ${o.type}`:`Recent Intent: ${o.type}`;!i[o.file_path].reasons.includes(m)&&i[o.file_path].reasons.length<5&&i[o.file_path].reasons.push(m)}return i}getCount(){return this.get("SELECT COUNT(*) as count FROM files")?.count||0}getTopDirectories(e,t=8){return this.all(`
297
+ SELECT
298
+ SUBSTR(path, LENGTH(?) + 2,
299
+ INSTR(SUBSTR(path, LENGTH(?) + 2), '/') - 1
300
+ ) as root,
301
+ COUNT(*) as total_files,
302
+ SUM(CASE
303
+ WHEN path LIKE '%.ts' OR path LIKE '%.tsx'
304
+ OR path LIKE '%.js' OR path LIKE '%.jsx'
305
+ OR path LIKE '%.mjs' OR path LIKE '%.cjs'
306
+ THEN 1 ELSE 0
307
+ END) as ts_files
308
+ FROM files
309
+ WHERE path LIKE ? || '/%/%'
310
+ GROUP BY root
311
+ ORDER BY total_files DESC
312
+ LIMIT ?
313
+ `,e,e,e,t)}hasFilesPattern(e){return!!this.get("SELECT 1 FROM files WHERE path LIKE ? LIMIT 1",e)}findPackageJsonChildren(e){return this.all(`
314
+ SELECT
315
+ path,
316
+ SUBSTR(path, LENGTH(?) + 2) as relPath
317
+ FROM files
318
+ WHERE path LIKE ? || '/%/package.json'
319
+ `,e,e)}deletePaths(e){if(e.length===0)return;let t=this.db.prepare("DELETE FROM files WHERE path = ?");this.db.transaction(s=>{for(let r of s)t.run(r)})(e)}updateMtime(e,t){this.run("UPDATE files SET mtime = ? WHERE path = ?",t,e)}batchSaveIndexResults(e,t,i,s){let r=this.db.prepare("DELETE FROM exports WHERE file_path = ?"),l=this.db.prepare("DELETE FROM imports WHERE file_path = ?"),c=this.db.prepare("DELETE FROM configs WHERE file_path = ?"),a=this.db.prepare("DELETE FROM file_content WHERE file_path = ?"),o=this.db.prepare("DELETE FROM event_synapses WHERE file_path = ?"),u=this.db.prepare("DELETE FROM type_graph_edges WHERE file_path = ?"),d=this.db.prepare("INSERT INTO exports (file_path, name, kind, signature, doc, start_line, end_line, classification, capabilities, parent_id, embedding) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)"),m=this.db.prepare("INSERT INTO imports (file_path, module_specifier, imported_symbols, resolved_path) VALUES (?, ?, ?, ?)"),b=this.db.prepare("INSERT INTO configs (file_path, key, value, kind) VALUES (?, ?, ?, ?)"),h=this.db.prepare("INSERT INTO file_content (file_path, content) VALUES (?, ?)"),S=this.db.prepare("INSERT INTO event_synapses (file_path, type, name, direction, line_number, code_snippet) VALUES (?, ?, ?, ?, ?, ?)"),C=this.db.prepare("INSERT INTO type_graph_edges (file_path, source_symbol_id, source_symbol_name, target_symbol_name, relationship, line_number, metadata) VALUES (?, ?, ?, ?, ?, ?, ?)"),lt=this.db.prepare(`
320
+ INSERT INTO files (path, mtime, last_scanned_at, classification, summary, embedding, content_hash)
321
+ VALUES (?, ?, ?, ?, ?, ?, ?)
322
+ ON CONFLICT(path) DO UPDATE SET
323
+ mtime=excluded.mtime,
324
+ last_scanned_at=excluded.last_scanned_at,
325
+ classification=excluded.classification,
326
+ summary=excluded.summary,
327
+ embedding=excluded.embedding,
328
+ content_hash=excluded.content_hash
329
+ `),ct=this.db.transaction(M=>{for(let ut of M){let{meta:y,exports:Ie,imports:Oe,configs:Ce,events:we,content:z,classification:dt,summary:mt,embedding:xe,contentHash:pt}=ut;r.run(y.path),l.run(y.path),c.run(y.path),a.run(y.path),o.run(y.path),u.run(y.path);let ht=pt??(z&&i?i(z):null);if(lt.run(y.path,y.mtime,Date.now(),dt||"Unknown",mt||"",xe?JSON.stringify(xe):null,ht),Ie){let E=(W,ft,gt)=>{for(let _ of ft){let Et=_.embedding?JSON.stringify(_.embedding):null,Ae=d.run(W,_.name,_.kind,_.signature,_.doc||"",_.line,_.endLine||_.line,_.classification||"Other",_.capabilities||"[]",gt,Et),ve=Number(Ae.lastInsertRowid);if(Number.isFinite(ve)){let _t=He(_.signature);for(let Y of _t)Y.targetName!==_.name&&C.run(W,ve,_.name,Y.targetName,Y.relationship,_.line,Y.metadata||null)}_.members&&_.members.length>0&&E(W,_.members,Ae.lastInsertRowid)}};E(y.path,Ie,null)}if(Oe)for(let E of Oe){let W=E.resolved_path!==void 0?E.resolved_path:s?.(E.module,y.path,t)??"";m.run(y.path,E.module,E.name,W)}if(Ce)for(let E of Ce)b.run(y.path,E.key,E.value,E.kind);if(z!==void 0&&h.run(y.path,z),we)for(let E of we)S.run(y.path,E.type,E.name,E.direction,E.line,E.snippet)}}),Ne=500;for(let M=0;M<e.length;M+=Ne)ct(e.slice(M,M+Ne))}getLatestScanTime(){return this.get("SELECT MAX(last_scanned_at) as t FROM files")?.t||null}buildContentFtsQuery(e){let t=e.replace(/([a-z0-9])([A-Z])/g,"$1 $2").toLowerCase().split(/[^a-z0-9_]+/).map(r=>r.trim()).filter(r=>r.length>=2).slice(0,12);if(t.length===0)return"";if(t.length===1)return`${t[0]}*`;let i=`"${t.join(" ")}"`,s=t.map(r=>`${r}*`).join(" OR ");return`${i} OR ${s}`}};var te=class extends f{getSection(e){return this.get("SELECT section, data, updated_at FROM hologram_snapshot WHERE section = ?",e)}getAllSections(){return this.all("SELECT section, data, updated_at FROM hologram_snapshot ORDER BY section")}upsertSection(e,t){this.run(`
330
+ INSERT INTO hologram_snapshot (section, data, updated_at)
331
+ VALUES (?, ?, unixepoch())
332
+ ON CONFLICT(section) DO UPDATE SET
333
+ data = excluded.data,
334
+ updated_at = excluded.updated_at
335
+ `,e,t)}deleteSection(e){this.run("DELETE FROM hologram_snapshot WHERE section = ?",e)}deleteAll(){this.run("DELETE FROM hologram_snapshot")}hasSection(e){return(this.get("SELECT COUNT(*) as count FROM hologram_snapshot WHERE section = ?",e)?.count??0)>0}};var Pe=`
336
+ WITH RECURSIVE dependency_chain AS (
337
+ -- Base case: Direct dependents of the target symbol
338
+ -- Meaning: Files that import the file where the symbol is defined
339
+ SELECT
340
+ i.file_path as consumer_path,
341
+ i.module_specifier,
342
+ i.imported_symbols,
343
+ f.path as source_path,
344
+ 1 as depth,
345
+ i.file_path || '<-' || f.path as path_chain
346
+ FROM imports i
347
+ JOIN files f ON i.resolved_path = f.path
348
+ WHERE f.path = ? -- The file where our changed symbol lives
349
+ AND (
350
+ -- Exact symbol match or wildcard import
351
+ i.imported_symbols LIKE ?
352
+ OR i.imported_symbols = '*'
353
+ OR i.imported_symbols = 'default'
354
+ OR i.imported_symbols = ''
355
+ )
356
+
357
+ UNION ALL
358
+
359
+ -- Recursive step: Find consumers of the consumers
360
+ SELECT
361
+ i.file_path as consumer_path,
362
+ i.module_specifier,
363
+ i.imported_symbols,
364
+ dc.consumer_path as source_path,
365
+ dc.depth + 1,
366
+ i.file_path || '<-' || dc.path_chain
367
+ FROM imports i
368
+ JOIN dependency_chain dc ON i.resolved_path = dc.consumer_path
369
+ WHERE dc.depth < ? -- Max depth limit
370
+ AND instr(dc.path_chain, i.file_path) = 0 -- Cycle detection
371
+ AND (
372
+ -- If the intermediate file is a re-exporter (barrel),
373
+ -- the next consumer must still be looking for the symbol
374
+ i.imported_symbols LIKE ?
375
+ OR i.imported_symbols = '*'
376
+ OR i.imported_symbols = ''
377
+ )
378
+ )
379
+ SELECT DISTINCT
380
+ dc.consumer_path,
381
+ dc.depth,
382
+ dc.source_path,
383
+ dc.imported_symbols
384
+ FROM dependency_chain dc
385
+ ORDER BY dc.depth, dc.consumer_path;
386
+ `;var ie=class extends f{findByFile(e){return this.all("SELECT * FROM imports WHERE file_path = ?",e)}findByFiles(e){if(e.length===0)return[];let t=e.map(()=>"?").join(", ");return this.all(`SELECT * FROM imports WHERE file_path IN (${t}) ORDER BY file_path`,...e)}getAllResolved(){return this.all(`
387
+ SELECT * FROM imports
388
+ WHERE resolved_path IS NOT NULL AND resolved_path != ''
389
+ `)}findDependents(e){return this.all("SELECT * FROM imports WHERE resolved_path = ?",e)}countByFile(e){return this.get("SELECT COUNT(*) as count FROM imports WHERE file_path = ?",e)?.count||0}countDependents(e){return this.get("SELECT COUNT(*) as count FROM imports WHERE resolved_path = ?",e)?.count||0}getImportsForFile(e){return this.all("SELECT module_specifier, imported_symbols, resolved_path FROM imports WHERE file_path = ?",e)}findImportSource(e,t){return this.get(`
390
+ SELECT *
391
+ FROM imports
392
+ WHERE file_path = ?
393
+ AND (imported_symbols LIKE ? OR imported_symbols = '*')
394
+ LIMIT 1
395
+ `,e,`%${t}%`)}findProxies(e){return this.all(`
396
+ SELECT i.file_path
397
+ FROM imports i
398
+ JOIN exports e ON i.file_path = e.file_path
399
+ WHERE i.resolved_path = ?
400
+ AND (e.kind = 'ExportAllDeclaration' OR e.kind = 'ExportMapping')
401
+ `,e)}findVerifiedDependents(e,t){if(e.length===0)return[];let i=e.map(()=>"?").join(", ");return this.all(`
402
+ SELECT i.file_path, i.imported_symbols, f.classification, f.summary
403
+ FROM imports i
404
+ JOIN files f ON i.file_path = f.path
405
+ WHERE i.resolved_path IN (${i})
406
+ AND (i.imported_symbols LIKE ? OR i.imported_symbols = '' OR i.imported_symbols = '*')
407
+ LIMIT 10
408
+ `,...e,`%${t}%`)}countVerifiedDependents(e,t){if(e.length===0)return 0;let i=e.map(()=>"?").join(", ");return this.get(`
409
+ SELECT COUNT(*) as count FROM imports
410
+ WHERE resolved_path IN (${i})
411
+ AND (imported_symbols LIKE ? OR imported_symbols = '' OR imported_symbols = '*')
412
+ `,...e,`%${t}%`)?.count||0}findImpactDependents(e,t,i){return this.all(Pe,e,t,i,t)}getCount(){return this.get("SELECT COUNT(*) as count FROM imports")?.count||0}};D();var re=class n extends f{findByMission(e,t=50){return this.all(`
413
+ SELECT
414
+ id, mission_id, symbol_id, file_path, type, content, confidence,
415
+ symbol_name, signature, commit_sha, is_crystallized, crystal_id,
416
+ created_at
417
+ FROM intent_logs
418
+ WHERE mission_id = ?
419
+ ORDER BY created_at DESC
420
+ LIMIT ?
421
+ `,e,t)}findRecentDecisionActivity(e=10){return this.all(`
422
+ SELECT
423
+ id, mission_id, symbol_id, file_path, type, content, confidence,
424
+ symbol_name, signature, commit_sha, is_crystallized, crystal_id,
425
+ created_at
426
+ FROM intent_logs
427
+ WHERE type IN ('decision', 'system', 'fix', 'heritage', 'adr')
428
+ ORDER BY created_at DESC
429
+ LIMIT ?
430
+ `,e)}create(e){let t=this.insert(`
431
+ INSERT INTO intent_logs (mission_id, symbol_id, file_path, type, content, confidence, symbol_name, signature, commit_sha)
432
+ VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?)
433
+ `,e.mission_id,e.symbol_id,e.file_path,e.type,e.content,e.confidence,e.symbol_name,e.signature,e.commit_sha);return n.EMBEDDABLE_TYPES.has(e.type)&&this.generateAndStoreEmbedding(Number(t),e).catch(i=>{p.debug({err:i,intentLogId:t},"Failed to generate intent log embedding")}),t}static EMBEDDABLE_TYPES=new Set(["decision","discovery","fix","blocker","note","heritage","crystal"]);static buildEmbeddingText(e){let t=[`[${e.type}]`];return e.symbol_name&&t.push(`symbol: ${e.symbol_name}`),e.file_path&&t.push(`file: ${e.file_path.split("/").pop()}`),t.push(e.content),t.join(" ")}async generateAndStoreEmbedding(e,t){let{generateEmbedding:i}=await Promise.resolve().then(()=>(A(),x)),s=n.buildEmbeddingText(t),r=await i(s);r&&this.run("UPDATE intent_logs SET embedding = ? WHERE id = ?",JSON.stringify(r),e)}findWithEmbeddings(){return this.all("SELECT * FROM intent_logs WHERE embedding IS NOT NULL AND type NOT IN ('system', 'lapsed')")}async findSemanticMatches(e,t,i){let{cosineSimilarity:s}=await Promise.resolve().then(()=>(A(),x)),r=this.findWithEmbeddings();if(r.length>5e3)return p.warn({count:r.length},"Intent log count exceeds brute-force vector scan limit (5000). Skipping semantic recall."),[];let l=[];for(let c of r)if(!(i&&c.symbol_id===i))try{let a=JSON.parse(c.embedding),o=s(e,a);o>.25&&l.push({id:c.id,mission_id:c.mission_id,type:c.type,content:c.content,symbol_name:c.symbol_name,file_path:c.file_path,similarity:o,created_at:c.created_at})}catch{}return l.sort((c,a)=>a.similarity-c.similarity).slice(0,t)}delete(e){this.run("DELETE FROM intent_logs WHERE id = ?",e)}update(e,t){let i=Object.keys(t);if(i.length===0)return;let s=i.map(l=>`${l} = ?`).join(", "),r=Object.values(t);r.push(e),this.run(`UPDATE intent_logs SET ${s} WHERE id = ?`,...r)}findRepairableOrphans(){return this.all(`
434
+ SELECT id, file_path, symbol_name, signature
435
+ FROM intent_logs
436
+ WHERE symbol_id IS NULL AND symbol_name IS NOT NULL
437
+ `)}findOrphans(){return this.all(`
438
+ SELECT il.id, il.symbol_id, il.file_path, il.symbol_name
439
+ FROM intent_logs il
440
+ WHERE (il.symbol_id IS NOT NULL AND NOT EXISTS (SELECT 1 FROM exports e WHERE e.id = il.symbol_id))
441
+ OR (il.symbol_id IS NULL AND il.type != 'lapsed' AND il.type != 'system' AND il.type != 'adr')
442
+ `)}findLogsForMissingFiles(){return this.all(`
443
+ SELECT il.id
444
+ FROM intent_logs il
445
+ WHERE il.file_path IS NOT NULL
446
+ AND NOT EXISTS (
447
+ SELECT 1 FROM files f WHERE f.path = il.file_path
448
+ )
449
+ `)}markAsLapsed(e){this.run(`
450
+ UPDATE intent_logs
451
+ SET symbol_id = NULL,
452
+ type = 'lapsed',
453
+ content = 'Lapsed: ' || content
454
+ WHERE id = ?
455
+ `,e)}importHeritage(e,t,i,s){this.run(`
456
+ INSERT INTO intent_logs (type, content, commit_sha, created_at, confidence, mission_id)
457
+ VALUES ('heritage', ?, ?, ?, ?, NULL)
458
+ `,e,t,i,s)}countByType(e){return this.get("SELECT COUNT(*) as count FROM intent_logs WHERE type = ?",e)?.count||0}findRawByMission(e){return this.all(`SELECT
459
+ id, mission_id, symbol_id, file_path, type, content, confidence,
460
+ symbol_name, signature, commit_sha, is_crystallized, crystal_id,
461
+ created_at
462
+ FROM intent_logs
463
+ WHERE mission_id = ? AND is_crystallized = 0
464
+ AND type NOT IN ('adr', 'system', 'crystal', 'lapsed')
465
+ ORDER BY created_at ASC`,e)}findCrystallizableByMission(e){return this.all(`SELECT
466
+ id, mission_id, symbol_id, file_path, type, content, confidence,
467
+ symbol_name, signature, commit_sha, is_crystallized, crystal_id,
468
+ created_at
469
+ FROM intent_logs
470
+ WHERE mission_id = ?
471
+ AND type NOT IN ('adr', 'system', 'crystal', 'lapsed')
472
+ ORDER BY created_at ASC`,e)}findCrystalByMission(e){return this.get(`SELECT
473
+ id, mission_id, symbol_id, file_path, type, content, confidence,
474
+ symbol_name, signature, commit_sha, is_crystallized, crystal_id,
475
+ created_at
476
+ FROM intent_logs
477
+ WHERE mission_id = ? AND type = 'crystal'
478
+ ORDER BY created_at DESC LIMIT 1`,e)}findCrystalBySymbol(e){return this.get(`SELECT
479
+ id, mission_id, symbol_id, file_path, type, content, confidence,
480
+ symbol_name, signature, commit_sha, is_crystallized, crystal_id,
481
+ created_at
482
+ FROM intent_logs
483
+ WHERE symbol_id = ? AND mission_id IS NULL AND type = 'crystal'
484
+ ORDER BY created_at DESC LIMIT 1`,e)}crystallize(e,t,i){return this.transaction(()=>{let s=i;return typeof s=="number"?this.run(`UPDATE intent_logs
485
+ SET content = ?, confidence = 1.0
486
+ WHERE id = ? AND mission_id = ? AND type = 'crystal'`,t,s,e):s=Number(this.insert(`INSERT INTO intent_logs (mission_id, type, content, confidence, is_crystallized, symbol_id, file_path, symbol_name, signature, commit_sha)
487
+ VALUES (?, 'crystal', ?, 1.0, 0, NULL, NULL, NULL, NULL, NULL)`,e,t)),this.run(`UPDATE intent_logs
488
+ SET is_crystallized = 1, crystal_id = ?
489
+ WHERE mission_id = ? AND is_crystallized = 0 AND id != ?
490
+ AND type NOT IN ('adr', 'system', 'crystal', 'lapsed')`,s,e,s),this.generateAndStoreEmbedding(s,{type:"crystal",content:t}).catch(r=>{p.debug({err:r,intentLogId:s},"Failed to refresh crystal embedding")}),s})}findRawBySymbol(e){return this.all(`SELECT * FROM intent_logs
491
+ WHERE symbol_id = ? AND mission_id IS NULL AND is_crystallized = 0
492
+ AND type NOT IN ('adr', 'system', 'crystal', 'lapsed')
493
+ ORDER BY created_at ASC`,e)}findCrystallizableBySymbol(e){return this.all(`SELECT
494
+ id, mission_id, symbol_id, file_path, type, content, confidence,
495
+ symbol_name, signature, commit_sha, is_crystallized, crystal_id,
496
+ created_at
497
+ FROM intent_logs
498
+ WHERE symbol_id = ? AND mission_id IS NULL
499
+ AND type NOT IN ('adr', 'system', 'crystal', 'lapsed')
500
+ ORDER BY created_at ASC`,e)}crystallizeBySymbol(e,t,i){return this.transaction(()=>{let s=i;return typeof s=="number"?this.run(`UPDATE intent_logs
501
+ SET content = ?, confidence = 1.0
502
+ WHERE id = ? AND symbol_id = ? AND mission_id IS NULL AND type = 'crystal'`,t,s,e):s=Number(this.insert(`INSERT INTO intent_logs (mission_id, symbol_id, type, content, confidence, is_crystallized, file_path, symbol_name, signature, commit_sha)
503
+ VALUES (NULL, ?, 'crystal', ?, 1.0, 0, NULL, NULL, NULL, NULL)`,e,t)),this.run(`UPDATE intent_logs
504
+ SET is_crystallized = 1, crystal_id = ?
505
+ WHERE symbol_id = ? AND mission_id IS NULL AND is_crystallized = 0 AND id != ?
506
+ AND type NOT IN ('adr', 'system', 'crystal', 'lapsed')`,s,e,s),this.generateAndStoreEmbedding(s,{type:"crystal",content:t}).catch(r=>{p.debug({err:r,intentLogId:s},"Failed to refresh crystal embedding")}),s})}countByMissions(e){if(e.length===0)return{};let t=e.map(()=>"?").join(","),i=this.all(`SELECT mission_id, COUNT(*) as cnt
507
+ FROM intent_logs
508
+ WHERE mission_id IN (${t})
509
+ AND type NOT IN ('system', 'adr', 'lapsed')
510
+ GROUP BY mission_id`,...e),s={};for(let r of i)s[r.mission_id]=r.cnt;return s}findMissionsWithBlockers(e){if(e.length===0)return new Set;let t=e.map(()=>"?").join(","),i=this.all(`SELECT DISTINCT mission_id
511
+ FROM intent_logs
512
+ WHERE mission_id IN (${t})
513
+ AND type = 'blocker'`,...e);return new Set(i.map(s=>s.mission_id))}findByMissionPreferCrystal(e,t=50){let i=this.findCrystalByMission(e);if(i){let s=this.all(`SELECT
514
+ id, mission_id, symbol_id, file_path, type, content, confidence,
515
+ symbol_name, signature, commit_sha, is_crystallized, crystal_id,
516
+ created_at
517
+ FROM intent_logs
518
+ WHERE mission_id = ? AND is_crystallized = 0 AND type NOT IN ('adr', 'system', 'crystal', 'lapsed')
519
+ AND created_at > ?
520
+ ORDER BY created_at DESC LIMIT ?`,e,i.created_at,t-1);return[i,...s]}return this.findByMission(e,t)}async findSemanticTheme(e,t,i=200){let{cosineSimilarity:s}=await Promise.resolve().then(()=>(A(),x)),r=this.findWithEmbeddings(),l=[];for(let c of r)if(n.EMBEDDABLE_TYPES.has(c.type)&&c.type!=="crystal"&&c.mission_id!=null&&!(t&&!t.includes(c.mission_id)))try{let a=JSON.parse(c.embedding),o=s(e,a);o>.35&&l.push({...c,_similarity:o})}catch{}return l.sort((c,a)=>a._similarity-c._similarity).slice(0,i).map(({_similarity:c,...a})=>a)}crystallizeTheme(e,t,i){return this.transaction(()=>{let s=this.insert(`INSERT INTO intent_logs (mission_id, type, content, confidence, is_crystallized, symbol_id, file_path, symbol_name, signature, commit_sha)
521
+ VALUES (NULL, 'crystal', ?, 1.0, 0, NULL, NULL, NULL, NULL, NULL)`,i);if(t.length>0){let r=t.map(()=>"?").join(",");this.run(`UPDATE intent_logs SET is_crystallized = 1, crystal_id = ? WHERE id IN (${r})`,s,...t)}return s})}async backfillEmbeddings(e=64,t){let{generateEmbeddingsBatch:i}=await Promise.resolve().then(()=>(A(),x)),s=[...n.EMBEDDABLE_TYPES].map(u=>`'${u}'`).join(","),r=this.all(`SELECT * FROM intent_logs WHERE embedding IS NULL AND type IN (${s})`);if(r.length===0)return 0;let l=r.map(u=>n.buildEmbeddingText(u)),c=await i(l,e,t),a=this.db.prepare("UPDATE intent_logs SET embedding = ? WHERE id = ?"),o=0;return this.transaction(()=>{for(let u=0;u<r.length;u++)c[u]&&(a.run(JSON.stringify(c[u]),r[u].id),o++)}),p.info({total:r.length,embedded:o},"Intent log embedding backfill complete"),o}};var oe=class extends f{findById(e){return this.get("SELECT * FROM missions WHERE id = ?",e)}findByIds(e){if(e.length===0)return[];let t=e.map(()=>"?").join(", ");return this.all(`SELECT * FROM missions WHERE id IN (${t})`,...e)}findActive(e){let t="SELECT * FROM missions WHERE status IN ('in-progress', 'planned', 'verifying')",i=[];return e&&(t+=" AND git_branch = ?",i.push(e)),t+=` ORDER BY
522
+ CASE WHEN status = 'in-progress' THEN 0 WHEN status = 'verifying' THEN 1 ELSE 2 END,
523
+ created_at ASC`,this.all(t,...i)}findAll(e){let t="SELECT * FROM missions",i=[];return e&&(t+=" WHERE status = ?",i.push(e)),t+=` ORDER BY
524
+ CASE WHEN status = 'in-progress' THEN 0 WHEN status = 'verifying' THEN 1 ELSE 2 END,
525
+ created_at ASC`,this.all(t,...i)}findRecentCompleted(e=3){return this.all(`
526
+ SELECT * FROM missions
527
+ WHERE status = 'completed'
528
+ ORDER BY updated_at DESC, id DESC
529
+ LIMIT ?
530
+ `,e)}create(e){return this.insert(`
531
+ INSERT INTO missions (name, goal, strategy_graph, status, git_branch, commit_sha, parent_id, verification_context, outcome_contract)
532
+ VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?)
533
+ `,e.name,e.goal,e.strategy_graph,e.status,e.git_branch,e.commit_sha,e.parent_id,e.verification_context,e.outcome_contract)}addArtifact(e,t,i,s){this.run("INSERT INTO mission_artifacts (mission_id, type, identifier, metadata) VALUES (?, ?, ?, ?)",e,t,i,s?JSON.stringify(s):null)}getArtifacts(e){return this.all("SELECT * FROM mission_artifacts WHERE mission_id = ?",e)}update(e,t){let i=Object.keys(t);if(i.length===0)return;let s=i.map(l=>`${l} = ?`).join(", "),r=Object.values(t);r.push(e),this.run(`UPDATE missions SET ${s}, updated_at = unixepoch() WHERE id = ?`,...r)}updateStatus(e,t,i){i?this.run("UPDATE missions SET status = ?, updated_at = unixepoch(), commit_sha = ? WHERE id = ?",t,i,e):this.run("UPDATE missions SET status = ?, updated_at = unixepoch() WHERE id = ?",t,e)}getWorkingSet(e){let t=this.all(`
534
+ SELECT file_path, type, source_priority, created_at
535
+ FROM (
536
+ SELECT
537
+ ws.file_path,
538
+ COALESCE(ws.type, 'file') AS type,
539
+ 0 AS source_priority,
540
+ ws.created_at
541
+ FROM working_set ws
542
+ WHERE ws.mission_id = ?
543
+
544
+ UNION ALL
545
+
546
+ SELECT
547
+ il.file_path,
548
+ 'intent' AS type,
549
+ 1 AS source_priority,
550
+ il.created_at
551
+ FROM intent_logs il
552
+ WHERE il.mission_id = ?
553
+ AND il.file_path IS NOT NULL
554
+
555
+ UNION ALL
556
+
557
+ SELECT
558
+ e.file_path,
559
+ 'symbol' AS type,
560
+ 2 AS source_priority,
561
+ il.created_at
562
+ FROM intent_logs il
563
+ JOIN exports e ON e.id = il.symbol_id
564
+ WHERE il.mission_id = ?
565
+ AND e.file_path IS NOT NULL
566
+ )
567
+ WHERE file_path IS NOT NULL
568
+ ORDER BY source_priority ASC, created_at DESC, file_path ASC
569
+ `,e,e,e),i=new Map;for(let s of t)!s.file_path||i.has(s.file_path)||i.set(s.file_path,{file_path:s.file_path,type:s.type||"file"});return[...i.values()]}clearWorkingSet(e){this.run("DELETE FROM working_set WHERE mission_id = ?",e)}addToWorkingSet(e,t,i="file"){this.run("INSERT OR IGNORE INTO files (path, mtime, last_scanned_at) VALUES (?, unixepoch(), unixepoch())",t),this.run("INSERT INTO working_set (mission_id, file_path, type) VALUES (?, ?, ?)",e,t,i)}findColdMissions(e,t=10){return this.all(`
570
+ SELECT m.id, COUNT(il.id) as log_count
571
+ FROM missions m
572
+ LEFT JOIN intent_logs il ON il.mission_id = m.id
573
+ WHERE m.updated_at < ?
574
+ AND m.status != 'distilled'
575
+ GROUP BY m.id
576
+ HAVING log_count > ?
577
+ `,e,t).map(s=>s.id)}getStats(){let e=this.get(`
578
+ SELECT
579
+ COUNT(*) as total,
580
+ SUM(CASE WHEN status='completed' THEN 1 ELSE 0 END) as completed,
581
+ SUM(CASE WHEN status IN ('in-progress', 'planned', 'verifying') THEN 1 ELSE 0 END) as active
582
+ FROM missions
583
+ `);return{total:e?.total||0,completed:e?.completed||0,active:e?.active||0}}getAnalytics(){let e=this.getStats(),t=e.total>0?Math.round(e.completed/e.total*100):0,i=this.get(`
584
+ SELECT AVG(updated_at - created_at) AS avg_duration
585
+ FROM missions
586
+ WHERE status = 'completed' AND updated_at > created_at
587
+ `),s=i?.avg_duration!=null?Math.round(i.avg_duration):null,r=Math.floor(Date.now()/1e3)-168*3600,l=Math.floor(Date.now()/1e3)-720*3600,c=this.get("SELECT COUNT(*) AS n FROM missions WHERE status = 'completed' AND updated_at >= ?",r),a=this.get("SELECT COUNT(*) AS n FROM missions WHERE status = 'completed' AND updated_at >= ?",l),o=c?.n??0,u=a?.n??0,d=`${o} completed in last 7 days, ${u} in last 30 days.`;if(s!=null){let m=Math.round(s/60);d+=` Avg mission duration: ${m} min.`}return{completionRate:t,averageDurationSeconds:s,completedLast7Days:o,completedLast30Days:u,velocityNote:d}}suspendByBranch(e){return this.run(`UPDATE missions
588
+ SET status = 'suspended', updated_at = unixepoch()
589
+ WHERE git_branch = ? AND status IN ('in-progress', 'verifying')`,e)}resumeByBranch(e){return this.run(`UPDATE missions
590
+ SET status = 'in-progress', updated_at = unixepoch()
591
+ WHERE git_branch = ? AND status = 'suspended'`,e)}findMergedMissions(e,t){if(t.length===0)return[];let i=t.filter(r=>r!==e);if(i.length===0)return[];let s=i.map(()=>"?").join(",");return this.all(`SELECT * FROM missions
592
+ WHERE status IN ('in-progress', 'planned', 'verifying', 'suspended')
593
+ AND git_branch IN (${s})`,...i)}findByCommitShas(e){if(e.length===0)return[];let t=e.map(()=>"?").join(",");return this.all(`SELECT * FROM missions WHERE commit_sha IN (${t})`,...e)}findByParentId(e){return this.all("SELECT * FROM missions WHERE parent_id = ?",e)}hasChildren(e){return!!this.get("SELECT 1 FROM missions WHERE parent_id = ? LIMIT 1",e)}hasNoSteps(e){if(!e.strategy_graph)return!0;try{let t=JSON.parse(e.strategy_graph),i=t?.steps??t;return!Array.isArray(i)||i.length===0}catch{return!0}}findParentOnlyIds(e){return e.filter(t=>t.parent_id!=null||!this.hasChildren(t.id)?!1:this.hasNoSteps(t)).map(t=>t.id)}createLink(e,t,i,s,r){return this.ensureCrossRepoLinksSchema(),this.run(`
594
+ INSERT OR IGNORE INTO cross_repo_links (mission_id, linked_repo_path, linked_mission_id, relationship, direction)
595
+ VALUES (?, ?, ?, ?, ?)
596
+ `,e,t,i,s,r)}getLink(e,t,i,s){return this.ensureCrossRepoLinksSchema(),this.get(`
597
+ SELECT relationship, direction
598
+ FROM cross_repo_links
599
+ WHERE mission_id = ?
600
+ AND linked_repo_path = ?
601
+ AND linked_mission_id = ?
602
+ AND direction = ?
603
+ LIMIT 1
604
+ `,e,t,i,s)}upsertLink(e,t,i,s,r){return this.ensureCrossRepoLinksSchema(),this.run(`
605
+ INSERT INTO cross_repo_links (
606
+ mission_id,
607
+ linked_repo_path,
608
+ linked_mission_id,
609
+ relationship,
610
+ direction
611
+ )
612
+ VALUES (?, ?, ?, ?, ?)
613
+ ON CONFLICT(mission_id, linked_repo_path, linked_mission_id, direction)
614
+ DO UPDATE SET relationship = excluded.relationship
615
+ `,e,t,i,s,r)}hasLink(e,t,i,s){return this.ensureCrossRepoLinksSchema(),!!this.get(`
616
+ SELECT id
617
+ FROM cross_repo_links
618
+ WHERE mission_id = ?
619
+ AND linked_repo_path = ?
620
+ AND linked_mission_id = ?
621
+ AND direction = ?
622
+ LIMIT 1
623
+ `,e,t,i,s)}deleteLink(e,t,i,s){return this.ensureCrossRepoLinksSchema(),this.run(`
624
+ DELETE FROM cross_repo_links
625
+ WHERE mission_id = ?
626
+ AND linked_repo_path = ?
627
+ AND linked_mission_id = ?
628
+ AND direction = ?
629
+ `,e,t,i,s)}ensureCrossRepoLinksSchema(){this.db.exec(`
630
+ CREATE TABLE IF NOT EXISTS cross_repo_links (
631
+ id INTEGER PRIMARY KEY AUTOINCREMENT,
632
+ mission_id INTEGER NOT NULL,
633
+ linked_repo_path TEXT NOT NULL,
634
+ linked_mission_id INTEGER NOT NULL,
635
+ relationship TEXT,
636
+ direction TEXT,
637
+ created_at REAL DEFAULT (unixepoch()),
638
+ FOREIGN KEY(mission_id) REFERENCES missions(id) ON DELETE CASCADE
639
+ );
640
+ CREATE INDEX IF NOT EXISTS idx_cross_repo_mission ON cross_repo_links(mission_id);
641
+ CREATE UNIQUE INDEX IF NOT EXISTS idx_cross_repo_unique
642
+ ON cross_repo_links(mission_id, linked_repo_path, linked_mission_id, direction);
643
+ `)}getLinks(e){try{return this.all(`
644
+ SELECT linked_repo_path, linked_mission_id, relationship, direction
645
+ FROM cross_repo_links
646
+ WHERE mission_id = ?
647
+ `,e)}catch{return[]}}findLastMission(){return this.get("SELECT * FROM missions ORDER BY updated_at DESC, id DESC LIMIT 1")}findActiveByPriority(){return this.get("SELECT * FROM missions WHERE status IN ('in-progress', 'active', 'verifying') ORDER BY CASE WHEN status = 'in-progress' THEN 0 ELSE 1 END, created_at ASC LIMIT 1")}addHandoff(e,t){let i=JSON.stringify(t),s=this.insert("INSERT INTO mission_artifacts (mission_id, type, identifier, metadata) VALUES (?, ?, ?, ?)",e,"handoff",t.kind,i),r=[`[handoff:${t.kind}]`,...t.findings.map(l=>l.statement),...t.risks.map(l=>l.description),...t.gaps].filter(Boolean).join(" ");return Promise.resolve().then(()=>(A(),x)).then(({generateEmbedding:l})=>l(r)).then(l=>{l&&this.run("UPDATE mission_artifacts SET embedding = ? WHERE id = ?",JSON.stringify(l),s)}).catch(()=>{}),s}getHandoffs(e,t,i=20){let s=["type = 'handoff'"],r=[];e!==void 0&&(e===null?s.push("mission_id IS NULL"):(s.push("mission_id = ?"),r.push(e))),t&&(s.push("identifier = ?"),r.push(t));let l=`SELECT * FROM mission_artifacts WHERE ${s.join(" AND ")} ORDER BY created_at DESC LIMIT ?`;return r.push(i),this.all(l,...r)}async findSemanticHandoffs(e,t){let{cosineSimilarity:i}=await Promise.resolve().then(()=>(A(),x)),s=["type = 'handoff'","embedding IS NOT NULL"],r=[];t?.missionId!==void 0&&(t.missionId===null?s.push("mission_id IS NULL"):(s.push("mission_id = ?"),r.push(t.missionId))),t?.kind&&(s.push("identifier = ?"),r.push(t.kind));let l=this.all(`SELECT * FROM mission_artifacts WHERE ${s.join(" AND ")}`,...r),c=[];for(let a of l)try{let o=JSON.parse(a.embedding),u=i(e,o);u>.3&&c.push({...a,similarity:u})}catch{}return c.sort((a,o)=>o.similarity-a.similarity).slice(0,t?.limit??5)}};var et=500,ae=class extends f{record(e,t,i=null){this.run("INSERT INTO search_history (query, mode, branch) VALUES (?, ?, ?)",e,t,i),this.pruneIfNeeded()}findRecent(e=20){return this.all("SELECT id, query, mode, branch, created_at FROM search_history ORDER BY created_at DESC LIMIT ?",e)}findRecentByQueryPrefix(e,t=10){return e.trim()?this.all(`SELECT id, query, mode, branch, created_at FROM search_history
648
+ WHERE query LIKE ? ORDER BY created_at DESC LIMIT ?`,`${e}%`,t):this.findRecent(t)}pruneIfNeeded(){(this.get("SELECT COUNT(*) as count FROM search_history")?.count??0)<=et||this.run(`DELETE FROM search_history WHERE id NOT IN (
649
+ SELECT id FROM search_history ORDER BY created_at DESC LIMIT ?
650
+ )`,et)}};var le=class n{static repositoryCache=new Map;static getInstance(e){let t=n.repositoryCache.get(e);if(t){let r=H(e),l=t.files?.database,a=!t.intentLogs||!t.searchHistory||!t.missions||!t.hologram||!t.claims;if(l===r&&r.open&&!a)return t;n.repositoryCache.delete(e)}let i=H(e),s={files:new ee(i),exports:new Z(i),imports:new ie(i),missions:new oe(i),intentLogs:new re(i),configs:new Q(i),content:new X(i),searchHistory:new ae(i),hologram:new te(i),claims:new J(i)};return n.repositoryCache.set(e,s),s}static closeInstance(e){n.repositoryCache.delete(e),ke(e)}static clearCache(e){n.repositoryCache.delete(e)}};var ai=Te.constants.priority.PRIORITY_LOWEST??Te.constants.priority.PRIORITY_LOW,li={visionary:3*6e4,architect:3*6e4,pragmatist:4*6e4,verdict:3*6e4},g=class extends Error{constructor(t,i){super(t);this.reason=i;this.name="TribunalStepError"}},me=process.argv[2],Re=process.argv[3],B=process.argv[4];(!me||!Re||!B)&&(process.stderr.write(`Tribunal: required args missing. Usage: node dist/entry/tribunal/index.js <repoPath> <missionId> <sessionId>
651
+ `),process.exit(1));var R=Number(Re);(!Number.isFinite(R)||R<=0)&&(process.stderr.write(`Tribunal: invalid missionId "${Re}"
652
+ `),process.exit(1));try{Te.setPriority(ai)}catch{}var st=H(me),{missions:v}=le.getInstance(me),j=!1,T="initializing",I=[];function ci(){st.prepare(`INSERT OR REPLACE INTO tribunal_state (
653
+ session_id,
654
+ mission_id,
655
+ repo_path,
656
+ status,
657
+ phase,
658
+ pid,
659
+ artifact_id,
660
+ started_at,
661
+ completed_at
662
+ ) VALUES (
663
+ ?,
664
+ ?,
665
+ ?,
666
+ 'running',
667
+ 'initializing',
668
+ ?,
669
+ COALESCE((SELECT artifact_id FROM tribunal_state WHERE session_id = ?), NULL),
670
+ COALESCE((SELECT started_at FROM tribunal_state WHERE session_id = ?), unixepoch()),
671
+ NULL
672
+ )`).run(B,R,me,process.pid,B,B)}function O(n){let e=[],t=[];n.status!==void 0&&(e.push("status = ?"),t.push(n.status)),n.phase!==void 0&&(e.push("phase = ?"),t.push(n.phase)),n.artifact_id!==void 0&&(e.push("artifact_id = ?"),t.push(n.artifact_id)),n.completed_at!==void 0&&(e.push("completed_at = ?"),t.push(n.completed_at)),n.pid!==void 0&&(e.push("pid = ?"),t.push(n.pid)),n.mission_id!==void 0&&(e.push("mission_id = ?"),t.push(n.mission_id)),n.repo_path!==void 0&&(e.push("repo_path = ?"),t.push(n.repo_path)),e.length!==0&&(t.push(B),st.prepare(`UPDATE tribunal_state SET ${e.join(", ")} WHERE session_id = ?`).run(...t))}function de(n){return Number.isFinite(n)?n<0?0:n>1?1:Number(n.toFixed(3)):.2}function Se(n,e=1200){let t=n.trim().replace(/\s+/g," ");return t.length<=e?t:`${t.slice(0,e-1)}\u2026`}function rt(n){let e=n.trim();if(!e)throw new g("Empty CLI output","json_parse_failed");try{return JSON.parse(e)}catch{let t=e.indexOf("{"),i=e.lastIndexOf("}");if(t>=0&&i>t)try{return JSON.parse(e.slice(t,i+1))}catch{throw new g("Failed to parse JSON output","json_parse_failed")}throw new g("Failed to parse JSON output","json_parse_failed")}}function ui(n){let e=rt(n),t=e.verdict;if(t!=="solid"&&t!=="needs_revision")throw new g("Invalid verdict value in JSON output","json_parse_failed");if(typeof e.summary!="string"||e.summary.trim().length===0)throw new g("Missing summary in JSON output","json_parse_failed");return{verdict:t,confidence:de(typeof e.confidence=="number"?e.confidence:.5),summary:Se(e.summary)}}function pe(n){switch(n){case"visionary":return"Visionary";case"architect":return"Architect";case"pragmatist":return"Pragmatist";case"verdict":return"Verdict";default:return"Initialization"}}function di(n){return n==="timed_out"?"timed out":n==="json_parse_failed"?"JSON parse failed":"non-zero exit"}var ye=JSON.stringify({type:"object",properties:{verdict:{type:"string",enum:["solid","needs_revision"]},confidence:{type:"number"},summary:{type:"string"}},required:["verdict","confidence","summary"]});function ot(n){let e=n==="visionary"?process.env.TRIBUNAL_VISIONARY_CMD:n==="architect"?process.env.TRIBUNAL_ARCHITECT_CMD:n==="pragmatist"?process.env.TRIBUNAL_PRAGMATIST_CMD:process.env.TRIBUNAL_VERDICT_CMD;return e?{command:e,kind:"raw"}:n==="visionary"?{command:`claude --print --model haiku --output-format json --json-schema '${ye}'`,kind:"claude"}:n==="architect"?{command:`claude --print --model sonnet --output-format json --json-schema '${ye}'`,kind:"claude"}:n==="pragmatist"?{command:"codex exec --ephemeral -m gpt-5.3-codex -",kind:"codex"}:{command:`claude --print --model sonnet --output-format json --json-schema '${ye}'`,kind:"claude"}}function mi(n){let e=rt(n);if(e.is_error===!0){let t=typeof e.result=="string"?e.result:"Claude API error";throw new g(Se(t),"non_zero_exit")}if(e.structured_output&&typeof e.structured_output=="object")return JSON.stringify(e.structured_output);if(typeof e.result=="string")return e.result;throw new g("Unexpected claude JSON envelope shape","json_parse_failed")}function pi(n){let e=n.split(`
673
+ `).filter(Boolean);for(let t=e.length-1;t>=0;t--)try{let i=JSON.parse(e[t]);if(i.type==="item.completed"){let s=i.item;if(s?.type==="agent_message"&&typeof s.text=="string")return s.text}}catch{}throw new g("No agent_message found in codex JSONL output","json_parse_failed")}function hi(n,e){return n==="claude"?mi(e):n==="codex"?pi(e):e}async function tt(n,e){let{command:t,kind:i}=ot(n),s=i==="codex"?`${t} --json`:t,r=oi(s,{shell:!0,stdio:["pipe","pipe","pipe"],env:process.env}),l="",c="",a=null,o=new Promise((d,m)=>{a=setTimeout(()=>{try{r.kill("SIGKILL")}catch{}m(new g(`Timeout in ${n} step`,"timed_out"))},li[n])}),u=new Promise((d,m)=>{r.stdout.on("data",b=>{l+=b.toString()}),r.stderr.on("data",b=>{c+=b.toString()}),r.on("error",()=>{m(new g(`Failed to start command: ${t}`,"non_zero_exit"))}),r.on("close",b=>{if(b!==0){let h=Se(c||l||`exit code ${b}`);m(new g(`${t} failed (${h})`,"non_zero_exit"));return}try{let h=hi(i,l);d(ui(h))}catch(h){if(h instanceof g){m(h);return}m(new g("Invalid JSON output","json_parse_failed"))}})});try{r.stdin.write(e),r.stdin.end()}catch{throw new g(`Failed to write prompt to ${t}`,"non_zero_exit")}try{return await Promise.race([u,o])}finally{a&&clearTimeout(a)}}async function ce(n,e){try{return await tt(n,e)}catch(t){if(t instanceof g&&t.reason==="json_parse_failed"){let i=`${e}
674
+
675
+ CRITICAL: Your previous response could not be parsed as JSON. Respond with ONLY a raw JSON object. The very first character of your response MUST be '{' and the last must be '}'. No markdown, no explanation, no code fences.`;return await tt(n,i)}throw t}}function fi(){let n=v.findById(R);if(!n)return`Mission ${R} not found.`;let e=n.strategy_graph&&n.strategy_graph.trim().length>0?n.strategy_graph:'{"steps": []}',t=n.outcome_contract??"No explicit outcome contract provided.",i=n.verification_context&&n.verification_context.trim().length>0?n.verification_context:"None specified.",s=n.parent_id!=null?`Sub-mission of Mission ${n.parent_id}`:"Top-level mission",r="";try{let l=JSON.parse(e);Array.isArray(l.steps)&&l.steps.length>0&&(r=l.steps.map((c,a)=>{let o=c.dependencies?.length?` [depends: ${c.dependencies.join(", ")}]`:"";return` ${a+1}. [${c.id??"?"}] ${c.description??""}${o} (${c.status??"pending"})`}).join(`
676
+ `))}catch{}return[`Mission ID: ${n.id}`,`Name: ${n.name}`,`Status: ${n.status}`,`Hierarchy: ${s}`,"",`GOAL: ${n.goal}`,"","OUTCOME CONTRACT (success criteria the author defined):",t,"","VERIFICATION CONTEXT (test harness / acceptance conditions):",i,"","STRATEGY STEPS:",r||e].join(`
677
+ `)}function ue(n,e,t,i){let s={visionary:["You are the Visionary on a Tribunal review board. Your job is the hardest and most valuable: you decide whether this mission is worth doing at all.","","You are NOT here to rubber-stamp well-written plans. You are here to catch missions that are solving the wrong problem, chasing phantom requirements, or missing the actual user need.","","Ask yourself:"," - What problem does this mission actually solve? Is that problem real and documented, or assumed?"," - Does the outcome contract measure whether the problem is *solved*, or just whether code was written?"," - Would a knowledgeable engineer, handed only the goal and outcome contract, agree this is the right thing to build?"," - What is the cost of being wrong here \u2014 if the mission is misaimed, how much work gets thrown away?","",'Issue "solid" only if you are confident the mission is solving a real, well-understood problem with appropriate scope.','Issue "needs_revision" if the goal is vague, the outcome contract is implementation-focused instead of outcome-focused, the scope is disproportionate to the problem, or the real need is unclear.','In your summary: name the specific gap and give a concrete fix ("Add X to outcome contract", "Narrow scope to Y", "Validate assumption Z before proceeding").'],architect:["You are the Architect on a Tribunal review board. Your job is to stress-test the implementation plan's structure.","","You are NOT evaluating whether the mission is worth doing (that is the Visionary's job). You are evaluating whether the plan, as written, will actually produce the stated outcome.","","Examine:"," - Dependency ordering: do steps depend on artifacts that earlier steps do not produce?"," - Missing steps: is there work implied by the outcome contract that no step in the strategy covers?"," - Coupling risk: are two steps that should be co-designed sequenced as independent tracks?"," - Reversibility: does the plan have checkpoints, or is it a single long sequence that fails atomically?"," - Backward compatibility: does any step break existing callers without a migration path?","",'Issue "solid" if the dependency graph is sound and the steps collectively produce the stated outcome.','Issue "needs_revision" if you find a structural gap \u2014 but be specific: name the step, name the gap, name the fix.',"Do not penalize good work for hypothetical future problems. Only flag gaps that will actually cause this mission to fail."],pragmatist:["You are the Pragmatist on a Tribunal review board. Your job is adversarial: find the ways this mission will fail in the real world.","","You are NOT here to agree with the other reviewers or to validate the plan. You are the last line of defense before execution.","","Think like an engineer who has been burned before:"," - What external dependencies (APIs, CLIs, DBs, file systems) can fail, rate-limit, or behave inconsistently?"," - What concurrency or race conditions exist between components?"," - What happens on partial failure \u2014 does the system leave behind corrupt state?"," - What contracts are underspecified \u2014 where will an implementer make an assumption that turns out to be wrong?"," - What does the outcome contract NOT test that could still go wrong silently?","",'Issue "solid" only if the execution risks are manageable and the plan has sufficient guardrails.','Issue "needs_revision" if there are concrete, unmitigated failure modes \u2014 name each one and state what contract or guardrail would address it.','Vague concerns ("this might be slow") are not findings. Concrete risks ("the DB write at step 3 is not idempotent so a retry on failure duplicates the artifact") are findings.'],verdict:["You are the Verdict on a Tribunal review board. Your job is synthesis and final authority.","","You have three prior reviews. Your job is NOT to average them. It is to reason about which concerns are blocking and which are advisory, and to issue a single authoritative verdict the mission owner can act on.","","How to reason:",' - A "needs_revision" from Visionary outweighs the others if the mission goal is unclear \u2014 there is no point fixing the plan if the goal is wrong.',' - A "needs_revision" from Architect is blocking if a missing step means the outcome contract cannot be met as written.',' - A "needs_revision" from Pragmatist is blocking if the failure mode is concrete and unmitigated \u2014 not just "could be risky".',' - If two reviewers say "solid" and one says "needs_revision" with a specific, fixable gap, the verdict can be "solid" if you judge the gap is addressable during execution rather than before.',' - If all three say "needs_revision", issue "needs_revision" with a prioritized list: what must be fixed first, and why.',"","Your summary must be actionable: the mission owner should be able to read your summary and know exactly what to do next.","Do not repeat the reviewers' findings \u2014 synthesize them. Resolve conflicts explicitly."]},r=["## Output Format","Respond with ONLY a raw JSON object. No markdown, no preamble, no explanation.",'{"verdict":"solid|needs_revision","confidence":0.0\u20131.0,"summary":"..."}',"",'verdict: "solid" = ready to execute. "needs_revision" = specific gaps must be addressed first.',"confidence: your certainty. 0.9+ means you are certain. 0.5 means genuinely uncertain. Never default to 0.5 \u2014 commit to a position.","summary: max 4 sentences. If needs_revision: name each gap, name the concrete fix. If solid: state why the plan is trustworthy."],l=[...s[n],"",...r,"","## Mission Under Review",e];return i.trim().length>0&&l.push("","## Round Context",i),t.trim().length>0?l.push("","## Prior Reviewer Findings",t):l.push("","## Prior Reviewer Findings","None \u2014 you are the first reviewer this round."),l.join(`
678
+ `)}function Le(){return I.map(({phase:n,review:e})=>({statement:`${pe(n)}: ${e.summary}`,confidence:de(e.confidence),refs:{traces:[n]}}))}function gi(){return I.filter(({review:n})=>n.verdict==="needs_revision").map(({phase:n,review:e})=>({severity:"medium",description:`${pe(n)}: ${e.summary}`,refs:{symbols:[n]}}))}function it(n,e){if(j)return;j=!0;let t=`${pe(e)} ${di(n.reason)}`,i={kind:"risk_assessment",findings:Le(),risks:[],missionsCreated:[],gaps:[t],confidence:.2,agentTag:"tribunal-daemon",verdict:"needs_revision",summary:t},s=Number(v.addHandoff(R,i));O({status:"failed",phase:e,artifact_id:Number.isFinite(s)?s:null,completed_at:Math.floor(Date.now()/1e3)}),process.exit(0)}function at(n){if(j)return;j=!0;let e=`${n} received during ${pe(T)} phase`,t={kind:"risk_assessment",findings:Le(),risks:[],missionsCreated:[],gaps:[e],confidence:.2,agentTag:"tribunal-daemon",verdict:"needs_revision",summary:e},i=Number(v.addHandoff(R,t));O({status:"failed",phase:T,artifact_id:Number.isFinite(i)?i:null,completed_at:Math.floor(Date.now()/1e3)}),process.exit(0)}var nt=3;async function Ei(n,e,t){let i=t>1?[`This is round ${t} of review. The prior round identified these unresolved gaps:`,`"${e}"`,"","Your job this round:"," 1. For each gap above \u2014 is it a hard blocker (must be fixed before execution) or an execution-time concern (can be addressed during implementation)?",' 2. If ALL remaining gaps are execution-time concerns, issue "solid" with a note about what to watch.',' 3. If ANY gap is a hard blocker, issue "needs_revision" \u2014 but propose the concrete fix, not just the problem.'," 4. Do NOT introduce new concerns unless they are directly caused by an unresolved prior gap.","The goal is resolution, not iteration."].join(`
679
+ `):"";T="visionary",O({status:"running",phase:T});let s=await ce("visionary",ue("visionary",n,"",i));I.push({phase:"visionary",review:s}),T="architect",O({status:"running",phase:T});let r=await ce("architect",ue("architect",n,`Visionary (${s.verdict}, ${s.confidence}): ${s.summary}`,i));I.push({phase:"architect",review:r}),T="pragmatist",O({status:"running",phase:T});let l=await ce("pragmatist",ue("pragmatist",n,[`Visionary (${s.verdict}, ${s.confidence}): ${s.summary}`,`Architect (${r.verdict}, ${r.confidence}): ${r.summary}`].join(`
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+ `),i));I.push({phase:"pragmatist",review:l});let c=[s.verdict,r.verdict,l.verdict],a=new Set(c).size>1?`
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+ NOTE: Reviewers split \u2014 (${c.join(", ")}). Your job is to decide which "needs_revision" concerns are hard blockers vs. execution-time concerns, and issue the final call.`:"";T="verdict",O({status:"running",phase:T});let o=await ce("verdict",ue("verdict",n,[`Visionary (${s.verdict}, ${s.confidence}): ${s.summary}`,`Architect (${r.verdict}, ${r.confidence}): ${r.summary}`,`Pragmatist (${l.verdict}, ${l.confidence}): ${l.summary}`,a].filter(Boolean).join(`
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+ `),i));return I.push({phase:"verdict",review:o}),o}async function _i(){ci();let n=fi(),t=`tribunal/${["visionary","architect","pragmatist","verdict"].map(u=>ot(u).kind).join("/")}`,i=null,s="";for(let u=1;u<=nt&&(O({status:"running",phase:"visionary",pid:process.pid}),i=await Ei(n,s,u),i.verdict!=="solid");u++)s=i.summary;let r=i.verdict,l=i.verdict==="needs_revision"?`Needs revision after ${nt} rounds. ${i.summary}`:i.summary,c=de(I.reduce((u,{review:d})=>u+d.confidence,0)/I.length)*(.7+.3*i.confidence),a={kind:"risk_assessment",findings:Le(),risks:gi(),missionsCreated:[],gaps:r==="needs_revision"?[l]:[],confidence:de(c),agentTag:t,verdict:r,summary:l},o=Number(v.addHandoff(R,a));if(r==="needs_revision"){let d=v.findById(R)?.verification_context?.trim()??"",m=`[Tribunal needs_revision]
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+ ${l}`;v.update(R,{verification_context:d.length>0?`${d}
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+
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+ ${m}`:m,status:"needs_revision"})}else v.updateStatus(R,"planned");O({status:"completed",phase:"verdict",artifact_id:Number.isFinite(o)?o:null,completed_at:Math.floor(Date.now()/1e3)}),j=!0,process.exit(0)}process.prependListener("SIGTERM",()=>{at("SIGTERM")});process.prependListener("SIGINT",()=>{at("SIGINT")});_i().catch(n=>{if(n instanceof g){it(n,T);return}let e=new g(n instanceof Error?n.message:String(n),"non_zero_exit");it(e,T)});