@precisa-saude/fhir 0.24.1 → 0.25.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -4,7 +4,7 @@
4
4
  var _chunkOR67NJDZcjs = require('./chunk-OR67NJDZ.cjs');
5
5
 
6
6
 
7
- var _chunkEHMCWZO3cjs = require('./chunk-EHMCWZO3.cjs');
7
+ var _chunkIBF6HOBGcjs = require('./chunk-IBF6HOBG.cjs');
8
8
 
9
9
 
10
10
 
@@ -38,7 +38,7 @@ function interpretationDisplay(flag) {
38
38
  }
39
39
  }
40
40
  function labObservationToFHIR(observation, patientId, laboratoryName) {
41
- const loincCode = _chunkEHMCWZO3cjs.codeToLoinc.call(void 0, observation.biomarkerCode);
41
+ const loincCode = _chunkIBF6HOBGcjs.codeToLoinc.call(void 0, observation.biomarkerCode);
42
42
  const sourceUnit = observation.unit || _chunkMJ254F5Kcjs.getDefaultUnit.call(void 0, observation.biomarkerCode) || observation.unit;
43
43
  const ucumUnit = _chunkMJ254F5Kcjs.unitToUCUM.call(void 0, sourceUnit);
44
44
  const isQualitative = observation.isQualitative || typeof observation.value === "string";
@@ -257,4 +257,4 @@ function labResultToFHIRBundle(report, observations, userProfile) {
257
257
 
258
258
 
259
259
  exports.BUNDLE_BASE_URL = BUNDLE_BASE_URL; exports.entryFullUrl = entryFullUrl; exports.labObservationToFHIR = labObservationToFHIR; exports.labReportToFHIR = labReportToFHIR; exports.userProfileToFHIR = userProfileToFHIR; exports.labResultToFHIRBundle = labResultToFHIRBundle;
260
- //# sourceMappingURL=chunk-L2LN2X6Y.cjs.map
260
+ //# sourceMappingURL=chunk-DGTP2QB6.cjs.map
@@ -1 +1 @@
1
- {"version":3,"sources":["/home/runner/work/fhir-brasil/fhir-brasil/packages/core/dist/chunk-L2LN2X6Y.cjs","../src/bundle-urls.ts","../src/converter.ts"],"names":[],"mappings":"AAAA;AACE;AACA;AACF,wDAA6B;AAC7B;AACE;AACF,wDAA6B;AAC7B;AACE;AACA;AACF,wDAA6B;AAC7B;AACA;ACsBO,IAAM,gBAAA,EAAkB,mCAAA;AAgBxB,IAAM,aAAA,EAAe,CAAC,QAAA,EAAA,GAC3B,CAAA,EAAA;ADpCgC;AACA;AEIc;AAChC,EAAA;AACP,IAAA;AACI,MAAA;AAAA;AACJ,IAAA;AACI,MAAA;AAAA;AACT,IAAA;AACS,MAAA;AACX,EAAA;AACF;AAK+B;AACf,EAAA;AACP,IAAA;AACI,MAAA;AACJ,IAAA;AACI,MAAA;AACT,IAAA;AACS,MAAA;AACX,EAAA;AACF;AAME;AAI8B,EAAA;AAGhB,EAAA;AACc,EAAA;AACN,EAAA;AAGwB,EAAA;AAClC,IAAA;AACR,MAAA;AACU,QAAA;AACN,UAAA;AACQ,YAAA;AACG,YAAA;AACD,YAAA;AACV,UAAA;AACF,QAAA;AACF,MAAA;AACF,IAAA;AACM,IAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAMI,MAAA;AAEF,QAAA;AACE,UAAA;AACQ,YAAA;AACe,YAAA;AACb,YAAA;AACV,UAAA;AAED,QAAA;AACL,QAAA;AACoB,UAAA;AACG,UAAA;AACb,UAAA;AACV,QAAA;AACF,MAAA;AACkB,MAAA;AACpB,IAAA;AACmB,IAAA;AACQ,IAAA;AACX,IAAA;AACd,MAAA;AACU,QAAA;AACN,UAAA;AACQ,YAAA;AACG,YAAA;AACD,YAAA;AACV,UAAA;AACF,QAAA;AACF,MAAA;AACF,IAAA;AAC6B,IAAA;AACf,IAAA;AACN,IAAA;AACC,IAAA;AACe,MAAA;AACxB,IAAA;AACF,EAAA;AAGmB,EAAA;AACY,IAAA;AACxB,EAAA;AACmB,IAAA;AAChB,MAAA;AACE,MAAA;AACF,MAAA;AACa,MAAA;AACrB,IAAA;AAGgB,IAAA;AACW,MAAA;AACvB,QAAA;AACQ,UAAA;AACE,YAAA;AACE,YAAA;AACF,YAAA;AACa,YAAA;AACrB,UAAA;AACK,UAAA;AACG,YAAA;AACE,YAAA;AACF,YAAA;AACa,YAAA;AACrB,UAAA;AACF,QAAA;AACF,MAAA;AACF,IAAA;AACF,EAAA;AAEO,EAAA;AACT;AAOE;AAII,EAAA;AACW,EAAA;AACR,IAAA;AACM,MAAA;AACT,MAAA;AACG,IAAA;AACM,MAAA;AACT,MAAA;AACG,IAAA;AACM,MAAA;AACT,MAAA;AACF,IAAA;AACW,MAAA;AACb,EAAA;AAEO,EAAA;AACK,IAAA;AACR,MAAA;AACU,QAAA;AACN,UAAA;AACQ,YAAA;AACG,YAAA;AACD,YAAA;AACV,UAAA;AACF,QAAA;AACF,MAAA;AACF,IAAA;AACM,IAAA;AACI,MAAA;AACN,QAAA;AACQ,UAAA;AAAA;AACG,UAAA;AACD,UAAA;AACV,QAAA;AACF,MAAA;AACM,MAAA;AACR,IAAA;AAES,IAAA;AAIA,IAAA;AAED,MAAA;AACU,QAAA;AACN,UAAA;AACQ,YAAA;AACG,YAAA;AACD,YAAA;AACV,UAAA;AACF,QAAA;AACF,MAAA;AAEF,IAAA;AACoB,IAAA;AACf,IAAA;AACI,IAAA;AACG,IAAA;AACJ,IAAA;AACc,IAAA;AAC5B,IAAA;AACS,IAAA;AACe,MAAA;AACxB,IAAA;AACF,EAAA;AACF;AAMkC;AACD,EAAA;AACD,EAAA;AACL,EAAA;AAElB,EAAA;AAED,IAAA;AACE,MAAA;AACwB,QAAA;AACG,QAAA;AACnB,QAAA;AACY,UAAA;AAGA,UAAA;AACF,QAAA;AACI,QAAA;AACG,QAAA;AACzB,MAAA;AAEF,IAAA;AACe,IAAA;AACH,IAAA;AACJ,IAAA;AACN,IAAA;AACJ,MAAA;AACE,QAAA;AAC0B,QAAA;AACZ,QAAA;AAChB,MAAA;AACF,IAAA;AACc,IAAA;AAEZ,IAAA;AACyB,MAAA;AACA,MAAA;AAErB,IAAA;AACyB,MAAA;AACA,MAAA;AAEzB,IAAA;AACR,EAAA;AACF;AAOE;AAI8B,EAAA;AAGL,EAAA;AACN,IAAA;AACW,MAAA;AAC1B,MAAA;AACO,MAAA;AACT,IAAA;AAEkB,IAAA;AACnB,EAAA;AAKsB,EAAA;AAGE,EAAA;AAGL,EAAA;AAEb,EAAA;AACE,IAAA;AACmB,MAAA;AACA,MAAA;AACrB,MAAA;AACL,IAAA;AACc,IAAA;AACR,IAAA;AACR,EAAA;AACF;AFxEkC;AACA;AACA;AACA;AACA;AACA;AACA;AACA;AACA","file":"/home/runner/work/fhir-brasil/fhir-brasil/packages/core/dist/chunk-L2LN2X6Y.cjs","sourcesContent":[null,"/**\n * Endereço das entradas de um Bundle.\n *\n * O `fullUrl` identifica a entrada, e é contra ele que o validador resolve as\n * referências entre os recursos. Um Bundle com `subject.reference` valendo\n * `Patient/abc` só resolve se alguma entrada tiver `fullUrl` terminando em\n * `/Patient/abc`: a referência relativa é lida contra a base do `fullUrl` da\n * entrada, que é como os exemplos da própria HL7 montam Bundle de coleção.\n *\n * Antes o `fullUrl` era `urn:uuid:observation-<laudo>-<código>`, que erra duas\n * vezes. `urn:uuid:` exige a sintaxe de UUID e aquilo não era um UUID, e num\n * Bundle de entradas `urn:uuid:` a referência precisa repetir a URN inteira,\n * então nenhuma das relativas resolvia. Um laudo de 22 marcadores saía com 24\n * erros de URN e 22 referências perdidas.\n */\n/**\n * Recurso que já tem id, e por isso pode ser endereçado numa entrada.\n *\n * No FHIR o `id` é opcional, porque um recurso pode viajar sem identidade\n * própria. Numa entrada de Bundle ele não pode: sem id não há `fullUrl`, e sem\n * `fullUrl` nenhuma referência chega ao recurso. Os conversores daqui sempre\n * atribuem um, e o tipo passa a dizer isso em vez de deixar `undefined` chegar\n * até a montagem da URL.\n */\nexport type Addressable<T> = T & { id: string };\n\n/**\n * Base dos `fullUrl`.\n *\n * Não precisa responder a uma requisição: no FHIR o `fullUrl` é identidade, não\n * endereço de download. Fica sob um domínio nosso para não colidir com a\n * identidade de recurso de outra instituição, que é o risco real de usar\n * `example.org` em dado que sai da máquina.\n */\nexport const BUNDLE_BASE_URL = 'https://precisa-saude.com.br/fhir';\n\n/**\n * Monta o `fullUrl` a partir do próprio recurso.\n *\n * Recebe o recurso em vez do tipo e do id soltos de propósito. O defeito que\n * isto substitui nasceu de montar os dois lados em separado: o `fullUrl` dizia\n * `observation-demo-Hgb` enquanto o recurso tinha id `demo-Hgb`, e ninguém\n * percebeu porque nada obrigava os dois a concordarem.\n *\n * O parâmetro pede o mínimo que a URL consome, e não a união de recursos que\n * este pacote converte. Um Bundle pode carregar qualquer recurso do R4, e quem\n * acrescenta uma entrada de um tipo que não está nessa união (um `Specimen`,\n * por exemplo) precisa do mesmo endereço, senão monta o dele e as duas formas\n * divergem outra vez.\n */\nexport const entryFullUrl = (resource: Addressable<{ resourceType: string }>): string =>\n `${BUNDLE_BASE_URL}/${resource.resourceType}/${resource.id}`;\n","/**\n * FHIR Converter\n *\n * Converts lab results to FHIR R4 DiagnosticReport and Observation resources.\n * See: https://hl7.org/fhir/diagnosticreport.html\n */\n\nimport { codeToLoinc } from './biomarkers';\nimport { type Addressable, entryFullUrl } from './bundle-urls';\nimport { BIOMARKER_CODE_SYSTEM, LOINC_SYSTEM } from './code-systems';\nimport type { FHIRBundle, FHIRDiagnosticReport, FHIRObservation, FHIRPatient } from './fhir-types';\nimport type { Flag, LabObservationData, LabReportData, UserProfileData } from './types';\nimport { getDefaultUnit, unitToUCUM } from './units';\n\n// Re-export all types and functions\nexport * from './fhir-types';\n\n/**\n * Convert Flag to FHIR interpretation code\n */\nfunction interpretationCode(flag: Flag): string {\n switch (flag) {\n case 'H':\n return 'H'; // High\n case 'L':\n return 'L'; // Low\n default:\n return 'N'; // Normal\n }\n}\n\n/**\n * Convert Flag to FHIR interpretation display\n */\nfunction interpretationDisplay(flag: Flag): string {\n switch (flag) {\n case 'H':\n return 'High';\n case 'L':\n return 'Low';\n default:\n return 'Normal';\n }\n}\n\n/**\n * Convert generic lab observation to FHIR Observation\n */\nexport function labObservationToFHIR(\n observation: LabObservationData,\n patientId: string,\n laboratoryName?: string,\n): Addressable<FHIRObservation> {\n const loincCode = codeToLoinc(observation.biomarkerCode);\n // Use default unit if source unit is empty\n const sourceUnit =\n observation.unit || getDefaultUnit(observation.biomarkerCode) || observation.unit;\n const ucumUnit = unitToUCUM(sourceUnit);\n const isQualitative = observation.isQualitative || typeof observation.value === 'string';\n\n // Base observation structure\n const fhirObs: Addressable<FHIRObservation> = {\n category: [\n {\n coding: [\n {\n code: 'laboratory',\n display: 'Laboratory',\n system: 'http://terminology.hl7.org/CodeSystem/observation-category',\n },\n ],\n },\n ],\n code: {\n // Sem LOINC, o coding LOINC simplesmente não sai. Antes ia `99999-9`,\n // que não é código LOINC nenhum: publicava sob `http://loinc.org` uma\n // afirmação falsa, e quem consumisse o bundle confiando no system\n // trataria aquilo como código de verdade. Composição corporal, densidade\n // óssea e escore de cálcio não têm LOINC, e o certo é a lacuna explícita.\n coding: [\n ...(loincCode\n ? [\n {\n code: loincCode,\n display: observation.biomarkerName,\n system: LOINC_SYSTEM,\n },\n ]\n : []),\n {\n code: observation.biomarkerCode,\n display: observation.biomarkerName,\n system: BIOMARKER_CODE_SYSTEM,\n },\n ],\n text: observation.biomarkerName,\n },\n effectiveDateTime: observation.collectionDate,\n id: `${observation.reportId}-${observation.biomarkerCode}`,\n interpretation: [\n {\n coding: [\n {\n code: interpretationCode(observation.flag),\n display: interpretationDisplay(observation.flag),\n system: 'http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation',\n },\n ],\n },\n ],\n performer: laboratoryName ? [{ display: laboratoryName }] : undefined,\n resourceType: 'Observation',\n status: 'final',\n subject: {\n reference: `Patient/${patientId}`,\n },\n };\n\n // Add value based on type (qualitative = string, quantitative = number)\n if (isQualitative) {\n fhirObs.valueString = String(observation.value);\n } else {\n fhirObs.valueQuantity = {\n code: ucumUnit,\n system: 'http://unitsofmeasure.org',\n unit: sourceUnit,\n value: observation.value as number,\n };\n\n // Reference range only applies to quantitative values\n if (observation.referenceMin !== undefined && observation.referenceMax !== undefined) {\n fhirObs.referenceRange = [\n {\n high: {\n code: ucumUnit,\n system: 'http://unitsofmeasure.org',\n unit: sourceUnit,\n value: observation.referenceMax,\n },\n low: {\n code: ucumUnit,\n system: 'http://unitsofmeasure.org',\n unit: sourceUnit,\n value: observation.referenceMin,\n },\n },\n ];\n }\n }\n\n return fhirObs;\n}\n\n/**\n * Convert generic lab report to FHIR DiagnosticReport\n */\nexport function labReportToFHIR(\n report: LabReportData,\n patientId: string,\n observationIds: string[],\n): Addressable<FHIRDiagnosticReport> {\n // Map processing status to FHIR status\n let status: FHIRDiagnosticReport['status'];\n switch (report.processingStatus) {\n case 'complete':\n status = 'final';\n break;\n case 'partial':\n status = 'partial';\n break;\n case 'pending_review':\n status = 'preliminary';\n break;\n default:\n status = 'final';\n }\n\n return {\n category: [\n {\n coding: [\n {\n code: 'LAB',\n display: 'Laboratory',\n system: 'http://terminology.hl7.org/CodeSystem/v2-0074',\n },\n ],\n },\n ],\n code: {\n coding: [\n {\n code: '11502-2', // Laboratory report\n display: 'Laboratory report',\n system: 'http://loinc.org',\n },\n ],\n text: 'Laboratory Results',\n },\n conclusion:\n report.overallStatus === 'NORMAL'\n ? 'All results within normal limits'\n : 'One or more abnormal results detected',\n conclusionCode:\n report.overallStatus === 'ANORMAL'\n ? [\n {\n coding: [\n {\n code: 'A',\n display: 'Abnormal',\n system: 'http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation',\n },\n ],\n },\n ]\n : undefined,\n effectiveDateTime: report.collectionDate,\n id: report.reportId,\n issued: report.createdAt,\n performer: report.laboratoryName ? [{ display: report.laboratoryName }] : undefined,\n resourceType: 'DiagnosticReport',\n result: observationIds.map((id) => ({ reference: `Observation/${id}` })),\n status,\n subject: {\n reference: `Patient/${patientId}`,\n },\n };\n}\n\n/**\n * Convert user profile to FHIR Patient\n * NOTE: CPF is intentionally excluded for privacy (LGPD compliance)\n */\nexport function userProfileToFHIR(profile: UserProfileData): Addressable<FHIRPatient> {\n const nameParts = profile.name.split(' ');\n const given = nameParts.slice(0, -1);\n const family = nameParts[nameParts.length - 1] || '';\n\n return {\n address: profile.address\n ? [\n {\n city: profile.address.city,\n country: profile.address.country || 'BR',\n line: [\n profile.address.street && profile.address.number\n ? `${profile.address.street}, ${profile.address.number}`\n : profile.address.street,\n profile.address.complement,\n ].filter(Boolean) as string[],\n postalCode: profile.address.postalCode,\n state: profile.address.state,\n },\n ]\n : undefined,\n birthDate: profile.birthDate,\n gender: profile.gender,\n id: profile.userId,\n name: [\n {\n family,\n given: given.length > 0 ? given : undefined,\n text: profile.name,\n },\n ],\n resourceType: 'Patient',\n telecom:\n [\n ...(profile.email ? [{ system: 'email' as const, value: profile.email }] : []),\n ...(profile.phone ? [{ system: 'phone' as const, value: profile.phone }] : []),\n ].length > 0\n ? [\n ...(profile.email ? [{ system: 'email' as const, value: profile.email }] : []),\n ...(profile.phone ? [{ system: 'phone' as const, value: profile.phone }] : []),\n ]\n : undefined,\n };\n}\n\n/**\n * Convert complete lab result to FHIR Bundle\n * This is the main function for exporting lab results to FHIR R4 format\n */\nexport function labResultToFHIRBundle(\n report: LabReportData,\n observations: LabObservationData[],\n userProfile: UserProfileData,\n): FHIRBundle {\n const patientId = userProfile.userId;\n\n // Convert observations\n const fhirObservations = observations.map((obs) => {\n const resource = labObservationToFHIR(\n { ...obs, collectionDate: report.collectionDate },\n patientId,\n report.laboratoryName,\n );\n\n return { fullUrl: entryFullUrl(resource), resource };\n });\n\n // Os ids vêm dos recursos já montados, e não de uma segunda montagem da mesma\n // regra. O `DiagnosticReport.result` aponta para eles, e era aqui que a\n // referência se separava do recurso.\n const observationIds = fhirObservations.map((entry) => entry.resource.id);\n\n // Convert report\n const diagnosticReport = labReportToFHIR(report, patientId, observationIds);\n\n // Convert patient\n const fhirPatient = userProfileToFHIR(userProfile);\n\n return {\n entry: [\n { fullUrl: entryFullUrl(fhirPatient), resource: fhirPatient },\n { fullUrl: entryFullUrl(diagnosticReport), resource: diagnosticReport },\n ...fhirObservations,\n ],\n resourceType: 'Bundle',\n type: 'collection',\n };\n}\n"]}
1
+ {"version":3,"sources":["/home/runner/work/fhir-brasil/fhir-brasil/packages/core/dist/chunk-DGTP2QB6.cjs","../src/bundle-urls.ts","../src/converter.ts"],"names":[],"mappings":"AAAA;AACE;AACA;AACF,wDAA6B;AAC7B;AACE;AACF,wDAA6B;AAC7B;AACE;AACA;AACF,wDAA6B;AAC7B;AACA;ACsBO,IAAM,gBAAA,EAAkB,mCAAA;AAgBxB,IAAM,aAAA,EAAe,CAAC,QAAA,EAAA,GAC3B,CAAA,EAAA;ADpCgC;AACA;AEIc;AAChC,EAAA;AACP,IAAA;AACI,MAAA;AAAA;AACJ,IAAA;AACI,MAAA;AAAA;AACT,IAAA;AACS,MAAA;AACX,EAAA;AACF;AAK+B;AACf,EAAA;AACP,IAAA;AACI,MAAA;AACJ,IAAA;AACI,MAAA;AACT,IAAA;AACS,MAAA;AACX,EAAA;AACF;AAME;AAI8B,EAAA;AAGhB,EAAA;AACc,EAAA;AACN,EAAA;AAGwB,EAAA;AAClC,IAAA;AACR,MAAA;AACU,QAAA;AACN,UAAA;AACQ,YAAA;AACG,YAAA;AACD,YAAA;AACV,UAAA;AACF,QAAA;AACF,MAAA;AACF,IAAA;AACM,IAAA;AAAA;AAAA;AAAA;AAAA;AAAA;AAMI,MAAA;AAEF,QAAA;AACE,UAAA;AACQ,YAAA;AACe,YAAA;AACb,YAAA;AACV,UAAA;AAED,QAAA;AACL,QAAA;AACoB,UAAA;AACG,UAAA;AACb,UAAA;AACV,QAAA;AACF,MAAA;AACkB,MAAA;AACpB,IAAA;AACmB,IAAA;AACQ,IAAA;AACX,IAAA;AACd,MAAA;AACU,QAAA;AACN,UAAA;AACQ,YAAA;AACG,YAAA;AACD,YAAA;AACV,UAAA;AACF,QAAA;AACF,MAAA;AACF,IAAA;AAC6B,IAAA;AACf,IAAA;AACN,IAAA;AACC,IAAA;AACe,MAAA;AACxB,IAAA;AACF,EAAA;AAGmB,EAAA;AACY,IAAA;AACxB,EAAA;AACmB,IAAA;AAChB,MAAA;AACE,MAAA;AACF,MAAA;AACa,MAAA;AACrB,IAAA;AAGgB,IAAA;AACW,MAAA;AACvB,QAAA;AACQ,UAAA;AACE,YAAA;AACE,YAAA;AACF,YAAA;AACa,YAAA;AACrB,UAAA;AACK,UAAA;AACG,YAAA;AACE,YAAA;AACF,YAAA;AACa,YAAA;AACrB,UAAA;AACF,QAAA;AACF,MAAA;AACF,IAAA;AACF,EAAA;AAEO,EAAA;AACT;AAOE;AAII,EAAA;AACW,EAAA;AACR,IAAA;AACM,MAAA;AACT,MAAA;AACG,IAAA;AACM,MAAA;AACT,MAAA;AACG,IAAA;AACM,MAAA;AACT,MAAA;AACF,IAAA;AACW,MAAA;AACb,EAAA;AAEO,EAAA;AACK,IAAA;AACR,MAAA;AACU,QAAA;AACN,UAAA;AACQ,YAAA;AACG,YAAA;AACD,YAAA;AACV,UAAA;AACF,QAAA;AACF,MAAA;AACF,IAAA;AACM,IAAA;AACI,MAAA;AACN,QAAA;AACQ,UAAA;AAAA;AACG,UAAA;AACD,UAAA;AACV,QAAA;AACF,MAAA;AACM,MAAA;AACR,IAAA;AAES,IAAA;AAIA,IAAA;AAED,MAAA;AACU,QAAA;AACN,UAAA;AACQ,YAAA;AACG,YAAA;AACD,YAAA;AACV,UAAA;AACF,QAAA;AACF,MAAA;AAEF,IAAA;AACoB,IAAA;AACf,IAAA;AACI,IAAA;AACG,IAAA;AACJ,IAAA;AACc,IAAA;AAC5B,IAAA;AACS,IAAA;AACe,MAAA;AACxB,IAAA;AACF,EAAA;AACF;AAMkC;AACD,EAAA;AACD,EAAA;AACL,EAAA;AAElB,EAAA;AAED,IAAA;AACE,MAAA;AACwB,QAAA;AACG,QAAA;AACnB,QAAA;AACY,UAAA;AAGA,UAAA;AACF,QAAA;AACI,QAAA;AACG,QAAA;AACzB,MAAA;AAEF,IAAA;AACe,IAAA;AACH,IAAA;AACJ,IAAA;AACN,IAAA;AACJ,MAAA;AACE,QAAA;AAC0B,QAAA;AACZ,QAAA;AAChB,MAAA;AACF,IAAA;AACc,IAAA;AAEZ,IAAA;AACyB,MAAA;AACA,MAAA;AAErB,IAAA;AACyB,MAAA;AACA,MAAA;AAEzB,IAAA;AACR,EAAA;AACF;AAOE;AAI8B,EAAA;AAGL,EAAA;AACN,IAAA;AACW,MAAA;AAC1B,MAAA;AACO,MAAA;AACT,IAAA;AAEkB,IAAA;AACnB,EAAA;AAKsB,EAAA;AAGE,EAAA;AAGL,EAAA;AAEb,EAAA;AACE,IAAA;AACmB,MAAA;AACA,MAAA;AACrB,MAAA;AACL,IAAA;AACc,IAAA;AACR,IAAA;AACR,EAAA;AACF;AFxEkC;AACA;AACA;AACA;AACA;AACA;AACA;AACA;AACA","file":"/home/runner/work/fhir-brasil/fhir-brasil/packages/core/dist/chunk-DGTP2QB6.cjs","sourcesContent":[null,"/**\n * Endereço das entradas de um Bundle.\n *\n * O `fullUrl` identifica a entrada, e é contra ele que o validador resolve as\n * referências entre os recursos. Um Bundle com `subject.reference` valendo\n * `Patient/abc` só resolve se alguma entrada tiver `fullUrl` terminando em\n * `/Patient/abc`: a referência relativa é lida contra a base do `fullUrl` da\n * entrada, que é como os exemplos da própria HL7 montam Bundle de coleção.\n *\n * Antes o `fullUrl` era `urn:uuid:observation-<laudo>-<código>`, que erra duas\n * vezes. `urn:uuid:` exige a sintaxe de UUID e aquilo não era um UUID, e num\n * Bundle de entradas `urn:uuid:` a referência precisa repetir a URN inteira,\n * então nenhuma das relativas resolvia. Um laudo de 22 marcadores saía com 24\n * erros de URN e 22 referências perdidas.\n */\n/**\n * Recurso que já tem id, e por isso pode ser endereçado numa entrada.\n *\n * No FHIR o `id` é opcional, porque um recurso pode viajar sem identidade\n * própria. Numa entrada de Bundle ele não pode: sem id não há `fullUrl`, e sem\n * `fullUrl` nenhuma referência chega ao recurso. Os conversores daqui sempre\n * atribuem um, e o tipo passa a dizer isso em vez de deixar `undefined` chegar\n * até a montagem da URL.\n */\nexport type Addressable<T> = T & { id: string };\n\n/**\n * Base dos `fullUrl`.\n *\n * Não precisa responder a uma requisição: no FHIR o `fullUrl` é identidade, não\n * endereço de download. Fica sob um domínio nosso para não colidir com a\n * identidade de recurso de outra instituição, que é o risco real de usar\n * `example.org` em dado que sai da máquina.\n */\nexport const BUNDLE_BASE_URL = 'https://precisa-saude.com.br/fhir';\n\n/**\n * Monta o `fullUrl` a partir do próprio recurso.\n *\n * Recebe o recurso em vez do tipo e do id soltos de propósito. O defeito que\n * isto substitui nasceu de montar os dois lados em separado: o `fullUrl` dizia\n * `observation-demo-Hgb` enquanto o recurso tinha id `demo-Hgb`, e ninguém\n * percebeu porque nada obrigava os dois a concordarem.\n *\n * O parâmetro pede o mínimo que a URL consome, e não a união de recursos que\n * este pacote converte. Um Bundle pode carregar qualquer recurso do R4, e quem\n * acrescenta uma entrada de um tipo que não está nessa união (um `Specimen`,\n * por exemplo) precisa do mesmo endereço, senão monta o dele e as duas formas\n * divergem outra vez.\n */\nexport const entryFullUrl = (resource: Addressable<{ resourceType: string }>): string =>\n `${BUNDLE_BASE_URL}/${resource.resourceType}/${resource.id}`;\n","/**\n * FHIR Converter\n *\n * Converts lab results to FHIR R4 DiagnosticReport and Observation resources.\n * See: https://hl7.org/fhir/diagnosticreport.html\n */\n\nimport { codeToLoinc } from './biomarkers';\nimport { type Addressable, entryFullUrl } from './bundle-urls';\nimport { BIOMARKER_CODE_SYSTEM, LOINC_SYSTEM } from './code-systems';\nimport type { FHIRBundle, FHIRDiagnosticReport, FHIRObservation, FHIRPatient } from './fhir-types';\nimport type { Flag, LabObservationData, LabReportData, UserProfileData } from './types';\nimport { getDefaultUnit, unitToUCUM } from './units';\n\n// Re-export all types and functions\nexport * from './fhir-types';\n\n/**\n * Convert Flag to FHIR interpretation code\n */\nfunction interpretationCode(flag: Flag): string {\n switch (flag) {\n case 'H':\n return 'H'; // High\n case 'L':\n return 'L'; // Low\n default:\n return 'N'; // Normal\n }\n}\n\n/**\n * Convert Flag to FHIR interpretation display\n */\nfunction interpretationDisplay(flag: Flag): string {\n switch (flag) {\n case 'H':\n return 'High';\n case 'L':\n return 'Low';\n default:\n return 'Normal';\n }\n}\n\n/**\n * Convert generic lab observation to FHIR Observation\n */\nexport function labObservationToFHIR(\n observation: LabObservationData,\n patientId: string,\n laboratoryName?: string,\n): Addressable<FHIRObservation> {\n const loincCode = codeToLoinc(observation.biomarkerCode);\n // Use default unit if source unit is empty\n const sourceUnit =\n observation.unit || getDefaultUnit(observation.biomarkerCode) || observation.unit;\n const ucumUnit = unitToUCUM(sourceUnit);\n const isQualitative = observation.isQualitative || typeof observation.value === 'string';\n\n // Base observation structure\n const fhirObs: Addressable<FHIRObservation> = {\n category: [\n {\n coding: [\n {\n code: 'laboratory',\n display: 'Laboratory',\n system: 'http://terminology.hl7.org/CodeSystem/observation-category',\n },\n ],\n },\n ],\n code: {\n // Sem LOINC, o coding LOINC simplesmente não sai. Antes ia `99999-9`,\n // que não é código LOINC nenhum: publicava sob `http://loinc.org` uma\n // afirmação falsa, e quem consumisse o bundle confiando no system\n // trataria aquilo como código de verdade. Composição corporal, densidade\n // óssea e escore de cálcio não têm LOINC, e o certo é a lacuna explícita.\n coding: [\n ...(loincCode\n ? [\n {\n code: loincCode,\n display: observation.biomarkerName,\n system: LOINC_SYSTEM,\n },\n ]\n : []),\n {\n code: observation.biomarkerCode,\n display: observation.biomarkerName,\n system: BIOMARKER_CODE_SYSTEM,\n },\n ],\n text: observation.biomarkerName,\n },\n effectiveDateTime: observation.collectionDate,\n id: `${observation.reportId}-${observation.biomarkerCode}`,\n interpretation: [\n {\n coding: [\n {\n code: interpretationCode(observation.flag),\n display: interpretationDisplay(observation.flag),\n system: 'http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation',\n },\n ],\n },\n ],\n performer: laboratoryName ? [{ display: laboratoryName }] : undefined,\n resourceType: 'Observation',\n status: 'final',\n subject: {\n reference: `Patient/${patientId}`,\n },\n };\n\n // Add value based on type (qualitative = string, quantitative = number)\n if (isQualitative) {\n fhirObs.valueString = String(observation.value);\n } else {\n fhirObs.valueQuantity = {\n code: ucumUnit,\n system: 'http://unitsofmeasure.org',\n unit: sourceUnit,\n value: observation.value as number,\n };\n\n // Reference range only applies to quantitative values\n if (observation.referenceMin !== undefined && observation.referenceMax !== undefined) {\n fhirObs.referenceRange = [\n {\n high: {\n code: ucumUnit,\n system: 'http://unitsofmeasure.org',\n unit: sourceUnit,\n value: observation.referenceMax,\n },\n low: {\n code: ucumUnit,\n system: 'http://unitsofmeasure.org',\n unit: sourceUnit,\n value: observation.referenceMin,\n },\n },\n ];\n }\n }\n\n return fhirObs;\n}\n\n/**\n * Convert generic lab report to FHIR DiagnosticReport\n */\nexport function labReportToFHIR(\n report: LabReportData,\n patientId: string,\n observationIds: string[],\n): Addressable<FHIRDiagnosticReport> {\n // Map processing status to FHIR status\n let status: FHIRDiagnosticReport['status'];\n switch (report.processingStatus) {\n case 'complete':\n status = 'final';\n break;\n case 'partial':\n status = 'partial';\n break;\n case 'pending_review':\n status = 'preliminary';\n break;\n default:\n status = 'final';\n }\n\n return {\n category: [\n {\n coding: [\n {\n code: 'LAB',\n display: 'Laboratory',\n system: 'http://terminology.hl7.org/CodeSystem/v2-0074',\n },\n ],\n },\n ],\n code: {\n coding: [\n {\n code: '11502-2', // Laboratory report\n display: 'Laboratory report',\n system: 'http://loinc.org',\n },\n ],\n text: 'Laboratory Results',\n },\n conclusion:\n report.overallStatus === 'NORMAL'\n ? 'All results within normal limits'\n : 'One or more abnormal results detected',\n conclusionCode:\n report.overallStatus === 'ANORMAL'\n ? [\n {\n coding: [\n {\n code: 'A',\n display: 'Abnormal',\n system: 'http://terminology.hl7.org/CodeSystem/v3-ObservationInterpretation',\n },\n ],\n },\n ]\n : undefined,\n effectiveDateTime: report.collectionDate,\n id: report.reportId,\n issued: report.createdAt,\n performer: report.laboratoryName ? [{ display: report.laboratoryName }] : undefined,\n resourceType: 'DiagnosticReport',\n result: observationIds.map((id) => ({ reference: `Observation/${id}` })),\n status,\n subject: {\n reference: `Patient/${patientId}`,\n },\n };\n}\n\n/**\n * Convert user profile to FHIR Patient\n * NOTE: CPF is intentionally excluded for privacy (LGPD compliance)\n */\nexport function userProfileToFHIR(profile: UserProfileData): Addressable<FHIRPatient> {\n const nameParts = profile.name.split(' ');\n const given = nameParts.slice(0, -1);\n const family = nameParts[nameParts.length - 1] || '';\n\n return {\n address: profile.address\n ? [\n {\n city: profile.address.city,\n country: profile.address.country || 'BR',\n line: [\n profile.address.street && profile.address.number\n ? `${profile.address.street}, ${profile.address.number}`\n : profile.address.street,\n profile.address.complement,\n ].filter(Boolean) as string[],\n postalCode: profile.address.postalCode,\n state: profile.address.state,\n },\n ]\n : undefined,\n birthDate: profile.birthDate,\n gender: profile.gender,\n id: profile.userId,\n name: [\n {\n family,\n given: given.length > 0 ? given : undefined,\n text: profile.name,\n },\n ],\n resourceType: 'Patient',\n telecom:\n [\n ...(profile.email ? [{ system: 'email' as const, value: profile.email }] : []),\n ...(profile.phone ? [{ system: 'phone' as const, value: profile.phone }] : []),\n ].length > 0\n ? [\n ...(profile.email ? [{ system: 'email' as const, value: profile.email }] : []),\n ...(profile.phone ? [{ system: 'phone' as const, value: profile.phone }] : []),\n ]\n : undefined,\n };\n}\n\n/**\n * Convert complete lab result to FHIR Bundle\n * This is the main function for exporting lab results to FHIR R4 format\n */\nexport function labResultToFHIRBundle(\n report: LabReportData,\n observations: LabObservationData[],\n userProfile: UserProfileData,\n): FHIRBundle {\n const patientId = userProfile.userId;\n\n // Convert observations\n const fhirObservations = observations.map((obs) => {\n const resource = labObservationToFHIR(\n { ...obs, collectionDate: report.collectionDate },\n patientId,\n report.laboratoryName,\n );\n\n return { fullUrl: entryFullUrl(resource), resource };\n });\n\n // Os ids vêm dos recursos já montados, e não de uma segunda montagem da mesma\n // regra. O `DiagnosticReport.result` aponta para eles, e era aqui que a\n // referência se separava do recurso.\n const observationIds = fhirObservations.map((entry) => entry.resource.id);\n\n // Convert report\n const diagnosticReport = labReportToFHIR(report, patientId, observationIds);\n\n // Convert patient\n const fhirPatient = userProfileToFHIR(userProfile);\n\n return {\n entry: [\n { fullUrl: entryFullUrl(fhirPatient), resource: fhirPatient },\n { fullUrl: entryFullUrl(diagnosticReport), resource: diagnosticReport },\n ...fhirObservations,\n ],\n resourceType: 'Bundle',\n type: 'collection',\n };\n}\n"]}
@@ -1201,7 +1201,14 @@ var BIOMARKER_DEFINITIONS = [
1201
1201
  loinc: "1742-6",
1202
1202
  names: {
1203
1203
  en: ["Alanine Transaminase", "ALT", "SGPT"],
1204
- pt: ["Alanina Aminotransferase", "ALT", "TGP"]
1204
+ pt: [
1205
+ "Alanina Aminotransferase",
1206
+ "ALT",
1207
+ "TGP",
1208
+ "Transaminase Glut\xE2mico-Pir\xFAvica",
1209
+ "Transaminase Pir\xFAvica",
1210
+ "TGP/ALT"
1211
+ ]
1205
1212
  },
1206
1213
  unit: "U/L"
1207
1214
  },
@@ -1242,7 +1249,14 @@ var BIOMARKER_DEFINITIONS = [
1242
1249
  loinc: "1920-8",
1243
1250
  names: {
1244
1251
  en: ["Aspartate Aminotransferase", "AST", "SGOT"],
1245
- pt: ["Aspartato Aminotransferase", "AST", "TGO"]
1252
+ pt: [
1253
+ "Aspartato Aminotransferase",
1254
+ "AST",
1255
+ "TGO",
1256
+ "Transaminase Glut\xE2mico-Oxalac\xE9tica",
1257
+ "Transaminase Oxalac\xE9tica",
1258
+ "TGO/AST"
1259
+ ]
1246
1260
  },
1247
1261
  unit: "U/L"
1248
1262
  },
@@ -1252,7 +1266,7 @@ var BIOMARKER_DEFINITIONS = [
1252
1266
  loinc: "2324-2",
1253
1267
  names: {
1254
1268
  en: ["Gamma-glutamyl Transferase", "GGT", "Gamma GT"],
1255
- pt: ["Gama-Glutamil Transferase", "GGT", "Gama GT"]
1269
+ pt: ["Gama-Glutamil Transferase", "GGT", "Gama GT", "Gama Glutamiltransferase", "Gama-GT"]
1256
1270
  },
1257
1271
  unit: "U/L"
1258
1272
  },
@@ -1397,7 +1411,11 @@ var BIOMARKER_DEFINITIONS = [
1397
1411
  loinc: "788-0",
1398
1412
  names: {
1399
1413
  en: ["Red Cell Distribution Width", "RDW"],
1400
- pt: ["Amplitude de Distribui\xE7\xE3o dos Eritr\xF3citos", "RDW"]
1414
+ pt: [
1415
+ "Amplitude de Distribui\xE7\xE3o dos Eritr\xF3citos",
1416
+ "RDW",
1417
+ "Coeficiente de Varia\xE7\xE3o do Volume Eritrocit\xE1rio"
1418
+ ]
1401
1419
  },
1402
1420
  unit: "%"
1403
1421
  },
@@ -1564,6 +1582,11 @@ var BIOMARKER_DEFINITIONS = [
1564
1582
  "eGFR CKD-EPI",
1565
1583
  "eGFR CKD-EPI 2021",
1566
1584
  "CKD-EPI 2021",
1585
+ // O laudo imprime só "CKD-EPI 2021", e a extração devolve o nome com o
1586
+ // "GFR" na frente. Sem esta entrada o exame virava
1587
+ // `UNKNOWN_GFR_CKD_EPI_2021` num laudo do Fleury, com valor medido e
1588
+ // tudo, porque a resolução por nome não achava a forma composta.
1589
+ "GFR CKD-EPI 2021",
1567
1590
  "CKD-EPI eGFR 2021",
1568
1591
  "eGFR (CKD-EPI 2021)",
1569
1592
  "eGFR (MDRD)",
@@ -3347,4 +3370,4 @@ function getBiomarkersForCategories(categories, options) {
3347
3370
 
3348
3371
 
3349
3372
  exports.BIOMARKER_DEFINITIONS = BIOMARKER_DEFINITIONS; exports.loincToCode = loincToCode; exports.codeToLoinc = codeToLoinc; exports.isValidLoinc = isValidLoinc; exports.isValidCode = isValidCode; exports.normalizeCode = normalizeCode; exports.getSexForCode = getSexForCode; exports.getDefinitionsBySex = getDefinitionsBySex; exports.getDefinitionByCode = getDefinitionByCode; exports.getDefinitionByLoinc = getDefinitionByLoinc; exports.getAllDefinitions = getAllDefinitions; exports.getVisibleDefinitions = getVisibleDefinitions; exports.getAllCodes = getAllCodes; exports.getAllLoincCodes = getAllLoincCodes; exports.generateLLMReference = generateLLMReference; exports.toBiomarkerTests = toBiomarkerTests; exports.getAllSearchPatterns = getAllSearchPatterns; exports.generateFilteredLLMReference = generateFilteredLLMReference; exports.DEXA_INDICATOR_CODES = DEXA_INDICATOR_CODES; exports.DEXA_CATEGORIES = DEXA_CATEGORIES; exports.generateDexaFullReference = generateDexaFullReference; exports.isDexaDocument = isDexaDocument; exports.CAC_INDICATOR_CODES = CAC_INDICATOR_CODES; exports.generateCacFullReference = generateCacFullReference; exports.isCacDocument = isCacDocument; exports.findCodeByName = findCodeByName; exports.validateLoincNameMatch = validateLoincNameMatch; exports.isBiomarkerVisible = isBiomarkerVisible; exports.filterVisibleBiomarkers = filterVisibleBiomarkers; exports.getBiomarkersByCategory = getBiomarkersByCategory; exports.getBiomarkersForCategories = getBiomarkersForCategories;
3350
- //# sourceMappingURL=chunk-EHMCWZO3.cjs.map
3373
+ //# sourceMappingURL=chunk-IBF6HOBG.cjs.map