@powersync/service-module-mongodb-storage 0.12.6 → 0.12.8

package/CHANGELOG.md

@@ -1,5 +1,28 @@
 # @powersync/service-module-mongodb-storage
 
+## 0.12.8
+
+### Patch Changes
+
+- da7ecc6: Upgrade mongodb driver to improve stability.
+- 5328802: [MongoDB Storage] Only compact modified buckets. Add index on bucket_state to handle large numbers of buckets when pre-calculating checksums or compacting, and skip small buckets.
+- Updated dependencies [a98cecb]
+- Updated dependencies [da7ecc6]
+- Updated dependencies [5328802]
+- Updated dependencies [704553e]
+  - @powersync/service-sync-rules@0.29.5
+  - @powersync/service-core@1.15.8
+  - @powersync/lib-services-framework@0.7.8
+  - @powersync/lib-service-mongodb@0.6.10
+
+## 0.12.7
+
+### Patch Changes
+
+- d976830: Fix SnapshotTooOld on parameter queries in some cases.
+- Updated dependencies [d976830]
+  - @powersync/service-core@1.15.7
+
 ## 0.12.6
 
 ### Patch Changes

package/dist/migrations/db/migrations/1760433882550-bucket-state-index2.d.ts

@@ -0,0 +1,3 @@
+import { migrations } from '@powersync/service-core';
+export declare const up: migrations.PowerSyncMigrationFunction;
+export declare const down: migrations.PowerSyncMigrationFunction;

package/dist/migrations/db/migrations/1760433882550-bucket-state-index2.js

@@ -0,0 +1,25 @@
+import * as storage from '../../../storage/storage-index.js';
+const INDEX_NAME = 'dirty_buckets';
+export const up = async (context) => {
+    const { service_context: { configuration } } = context;
+    const db = storage.createPowerSyncMongo(configuration.storage);
+    try {
+        await db.createBucketStateIndex2();
+    }
+    finally {
+        await db.client.close();
+    }
+};
+export const down = async (context) => {
+    const { service_context: { configuration } } = context;
+    const db = storage.createPowerSyncMongo(configuration.storage);
+    try {
+        if (await db.bucket_state.indexExists(INDEX_NAME)) {
+            await db.bucket_state.dropIndex(INDEX_NAME);
+        }
+    }
+    finally {
+        await db.client.close();
+    }
+};
+//# sourceMappingURL=1760433882550-bucket-state-index2.js.map

package/dist/migrations/db/migrations/1760433882550-bucket-state-index2.js.map

@@ -0,0 +1 @@
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package/dist/storage/implementation/MongoCompactor.d.ts

@@ -1,4 +1,4 @@
-import { storage } from '@powersync/service-core';
+import { PopulateChecksumCacheResults, storage } from '@powersync/service-core';
 import { PowerSyncMongo } from './db.js';
 import { MongoSyncBucketStorage } from './MongoSyncBucketStorage.js';
 /**
@@ -26,7 +26,8 @@ export declare class MongoCompactor {
      * See /docs/compacting-operations.md for details.
      */
     compact(): Promise<void>;
-    compactInternal(bucket: string | undefined): Promise<void>;
+    private compactDirtyBuckets;
+    private compactSingleBucket;
     /**
      * Call when done with a bucket.
      */
@@ -43,6 +44,15 @@ export declare class MongoCompactor {
     /**
      * Subset of compact, only populating checksums where relevant.
      */
-    populateChecksums(): Promise<void>;
+    populateChecksums(options: {
+        minBucketChanges: number;
+    }): Promise<PopulateChecksumCacheResults>;
+    /**
+     * Returns a batch of dirty buckets - buckets with most changes first.
+     *
+     * This cannot be used to iterate on its own - the client is expected to process these buckets and
+     * set estimate_since_compact.count: 0 when done, before fetching the next batch.
+     */
+    private dirtyBucketBatch;
     private updateChecksumsBatch;
 }

package/dist/storage/implementation/MongoCompactor.js

@@ -43,59 +43,50 @@ export class MongoCompactor {
                 // We can make this more efficient later on by iterating
                 // through the buckets in a single query.
                 // That makes batching more tricky, so we leave for later.
-                await this.compactInternal(bucket);
+                await this.compactSingleBucket(bucket);
             }
         }
         else {
-            await this.compactInternal(undefined);
+            await this.compactDirtyBuckets();
         }
     }
-    async compactInternal(bucket) {
-        const idLimitBytes = this.idLimitBytes;
-        let currentState = null;
-        let bucketLower;
-        let bucketUpper;
-        if (bucket == null) {
-            bucketLower = new mongo.MinKey();
-            bucketUpper = new mongo.MaxKey();
-        }
-        else if (bucket.includes('[')) {
-            // Exact bucket name
-            bucketLower = bucket;
-            bucketUpper = bucket;
-        }
-        else {
-            // Bucket definition name
-            bucketLower = `${bucket}[`;
-            bucketUpper = `${bucket}[\uFFFF`;
+    async compactDirtyBuckets() {
+        while (!this.signal?.aborted) {
+            // Process all buckets with 1 or more changes since last time
+            const buckets = await this.dirtyBucketBatch({ minBucketChanges: 1 });
+            if (buckets.length == 0) {
+                // All done
+                break;
+            }
+            for (let bucket of buckets) {
+                await this.compactSingleBucket(bucket);
+            }
         }
+    }
+    async compactSingleBucket(bucket) {
+        const idLimitBytes = this.idLimitBytes;
+        let currentState = {
+            bucket,
+            seen: new Map(),
+            trackingSize: 0,
+            lastNotPut: null,
+            opsSincePut: 0,
+            checksum: 0,
+            opCount: 0,
+            opBytes: 0
+        };
         // Constant lower bound
         const lowerBound = {
             g: this.group_id,
-            b: bucketLower,
+            b: bucket,
             o: new mongo.MinKey()
         };
         // Upper bound is adjusted for each batch
         let upperBound = {
             g: this.group_id,
-            b: bucketUpper,
+            b: bucket,
             o: new mongo.MaxKey()
         };
-        const doneWithBucket = async () => {
-            if (currentState == null) {
-                return;
-            }
-            // Free memory before clearing bucket
-            currentState.seen.clear();
-            if (currentState.lastNotPut != null && currentState.opsSincePut >= 1) {
-                logger.info(`Inserting CLEAR at ${this.group_id}:${currentState.bucket}:${currentState.lastNotPut} to remove ${currentState.opsSincePut} operations`);
-                // Need flush() before clear()
-                await this.flush();
-                await this.clearBucket(currentState);
-            }
-            // Do this _after_ clearBucket so that we have accurate counts.
-            this.updateBucketChecksums(currentState);
-        };
         while (!this.signal?.aborted) {
             // Query one batch at a time, to avoid cursor timeouts
             const cursor = this.db.bucket_data.aggregate([
@@ -121,7 +112,11 @@ export class MongoCompactor {
                         size: { $bsonSize: '$$ROOT' }
                     }
                 }
-            ], { batchSize: this.moveBatchQueryLimit });
+            ], {
+                // batchSize is 1 more than limit to auto-close the cursor.
+                // See https://github.com/mongodb/node-mongodb-native/pull/4580
+                batchSize: this.moveBatchQueryLimit + 1
+            });
             // We don't limit to a single batch here, since that often causes MongoDB to scan through more than it returns.
             // Instead, we load up to the limit.
             const batch = await cursor.toArray();
@@ -132,19 +127,6 @@ export class MongoCompactor {
             // Set upperBound for the next batch
             upperBound = batch[batch.length - 1]._id;
             for (let doc of batch) {
-                if (currentState == null || doc._id.b != currentState.bucket) {
-                    await doneWithBucket();
-                    currentState = {
-                        bucket: doc._id.b,
-                        seen: new Map(),
-                        trackingSize: 0,
-                        lastNotPut: null,
-                        opsSincePut: 0,
-                        checksum: 0,
-                        opCount: 0,
-                        opBytes: 0
-                    };
-                }
                 if (doc._id.o > this.maxOpId) {
                     continue;
                 }
@@ -210,11 +192,18 @@ export class MongoCompactor {
                     await this.flush();
                 }
             }
-            if (currentState != null) {
-                logger.info(`Processed batch of length ${batch.length} current bucket: ${currentState.bucket}`);
-            }
+            logger.info(`Processed batch of length ${batch.length} current bucket: ${bucket}`);
+        }
+        // Free memory before clearing bucket
+        currentState.seen.clear();
+        if (currentState.lastNotPut != null && currentState.opsSincePut >= 1) {
+            logger.info(`Inserting CLEAR at ${this.group_id}:${bucket}:${currentState.lastNotPut} to remove ${currentState.opsSincePut} operations`);
+            // Need flush() before clear()
+            await this.flush();
+            await this.clearBucket(currentState);
         }
-        await doneWithBucket();
+        // Do this _after_ clearBucket so that we have accurate counts.
+        this.updateBucketChecksums(currentState);
         // Need another flush after updateBucketChecksums()
         await this.flush();
     }
@@ -381,46 +370,49 @@ export class MongoCompactor {
     /**
      * Subset of compact, only populating checksums where relevant.
      */
-    async populateChecksums() {
-        // This is updated after each batch
-        let lowerBound = {
-            g: this.group_id,
-            b: new mongo.MinKey()
-        };
-        // This is static
-        const upperBound = {
-            g: this.group_id,
-            b: new mongo.MaxKey()
-        };
+    async populateChecksums(options) {
+        let count = 0;
         while (!this.signal?.aborted) {
-            // By filtering buckets, we effectively make this "resumeable".
-            const filter = {
-                _id: {
-                    $gt: lowerBound,
-                    $lt: upperBound
-                },
-                compacted_state: { $exists: false }
-            };
-            const bucketsWithoutChecksums = await this.db.bucket_state
-                .find(filter, {
-                projection: {
-                    _id: 1
-                },
-                sort: {
-                    _id: 1
-                },
-                limit: 5_000,
-                maxTimeMS: MONGO_OPERATION_TIMEOUT_MS
-            })
-                .toArray();
-            if (bucketsWithoutChecksums.length == 0) {
+            const buckets = await this.dirtyBucketBatch(options);
+            if (buckets.length == 0) {
                 // All done
                 break;
             }
-            logger.info(`Calculating checksums for batch of ${bucketsWithoutChecksums.length} buckets`);
-            await this.updateChecksumsBatch(bucketsWithoutChecksums.map((b) => b._id.b));
-            lowerBound = bucketsWithoutChecksums[bucketsWithoutChecksums.length - 1]._id;
+            const start = Date.now();
+            logger.info(`Calculating checksums for batch of ${buckets.length} buckets, starting at ${buckets[0]}`);
+            await this.updateChecksumsBatch(buckets);
+            logger.info(`Updated checksums for batch of ${buckets.length} buckets in ${Date.now() - start}ms`);
+            count += buckets.length;
+        }
+        return { buckets: count };
+    }
+    /**
+     * Returns a batch of dirty buckets - buckets with most changes first.
+     *
+     * This cannot be used to iterate on its own - the client is expected to process these buckets and
+     * set estimate_since_compact.count: 0 when done, before fetching the next batch.
+     */
+    async dirtyBucketBatch(options) {
+        if (options.minBucketChanges <= 0) {
+            throw new ReplicationAssertionError('minBucketChanges must be >= 1');
         }
+        // We make use of an index on {_id.g: 1, 'estimate_since_compact.count': -1}
+        const dirtyBuckets = await this.db.bucket_state
+            .find({
+            '_id.g': this.group_id,
+            'estimate_since_compact.count': { $gte: options.minBucketChanges }
+        }, {
+            projection: {
+                _id: 1
+            },
+            sort: {
+                'estimate_since_compact.count': -1
+            },
+            limit: 5_000,
+            maxTimeMS: MONGO_OPERATION_TIMEOUT_MS
+        })
+            .toArray();
+        return dirtyBuckets.map((bucket) => bucket._id.b);
     }
     async updateChecksumsBatch(buckets) {
         const checksums = await this.storage.checksums.computePartialChecksumsDirect(buckets.map((bucket) => {
@@ -449,6 +441,10 @@ export class MongoCompactor {
                                 count: bucketChecksum.count,
                                 checksum: BigInt(bucketChecksum.checksum),
                                 bytes: null
+                            },
+                            estimate_since_compact: {
+                                count: 0,
+                                bytes: 0
                             }
                         }
                     },

package/dist/storage/implementation/MongoCompactor.js.map

@@ -1 +1 @@
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package/dist/storage/implementation/MongoSyncBucketStorage.d.ts

@@ -1,6 +1,6 @@
 import { mongo } from '@powersync/lib-service-mongodb';
 import { BaseObserver } from '@powersync/lib-services-framework';
-import { CheckpointChanges, CompactOptions, GetCheckpointChangesOptions, InternalOpId, ReplicationCheckpoint, storage, utils, WatchWriteCheckpointOptions } from '@powersync/service-core';
+import { CheckpointChanges, GetCheckpointChangesOptions, InternalOpId, PopulateChecksumCacheOptions, PopulateChecksumCacheResults, ReplicationCheckpoint, storage, utils, WatchWriteCheckpointOptions } from '@powersync/service-core';
 import { ParameterLookup, SqliteJsonRow, SqlSyncRules } from '@powersync/service-sync-rules';
 import { MongoBucketStorage } from '../MongoBucketStorage.js';
 import { MongoChecksumOptions, MongoChecksums } from './MongoChecksums.js';
@@ -36,7 +36,7 @@ export declare class MongoSyncBucketStorage extends BaseObserver<storage.SyncRul
     private clearIteration;
     reportError(e: any): Promise<void>;
     compact(options?: storage.CompactOptions): Promise<void>;
-    populatePersistentChecksumCache(options: Required<Pick<CompactOptions, 'signal' | 'maxOpId'>>): Promise<void>;
+    populatePersistentChecksumCache(options: PopulateChecksumCacheOptions): Promise<PopulateChecksumCacheResults>;
     /**
      * Instance-wide watch on the latest available checkpoint (op_id + lsn).
      */

package/dist/storage/implementation/MongoSyncBucketStorage.js

@@ -63,6 +63,16 @@ import { MongoCompactor } from './MongoCompactor.js';
 import { MongoParameterCompactor } from './MongoParameterCompactor.js';
 import { MongoWriteCheckpointAPI } from './MongoWriteCheckpointAPI.js';
 import { idPrefixFilter, mapOpEntry, readSingleBatch, setSessionSnapshotTime } from './util.js';
+/**
+ * Only keep checkpoints around for a minute, before fetching a fresh one.
+ *
+ * The reason is that we keep a MongoDB snapshot reference (clusterTime) with the checkpoint,
+ * and they expire after 5 minutes by default. This is an issue if the checkpoint stream is idle,
+ * but new clients connect and use an outdated checkpoint snapshot for parameter queries.
+ *
+ * These will be filtered out for existing clients, so should not create significant overhead.
+ */
+const CHECKPOINT_TIMEOUT_MS = 60_000;
 export class MongoSyncBucketStorage extends BaseObserver {
     factory;
     group_id;
@@ -370,7 +380,9 @@ export class MongoSyncBucketStorage extends BaseObserver {
             limit: batchLimit,
             // Increase batch size above the default 101, so that we can fill an entire batch in
             // one go.
-            batchSize: batchLimit,
+            // batchSize is 1 more than limit to auto-close the cursor.
+            // See https://github.com/mongodb/node-mongodb-native/pull/4580
+            batchSize: batchLimit + 1,
             // Raw mode is returns an array of Buffer instead of parsed documents.
             // We use it so that:
             // 1. We can calculate the document size accurately without serializing again.
@@ -583,9 +595,14 @@ export class MongoSyncBucketStorage extends BaseObserver {
             // Don't track updates for MOVE compacting
             memoryLimitMB: 0
         });
-        await compactor.populateChecksums();
+        const result = await compactor.populateChecksums({
+            // There are cases with millions of small buckets, in which case it can take very long to
+            // populate the checksums, with minimal benefit. We skip the small buckets here.
+            minBucketChanges: options.minBucketChanges ?? 10
+        });
         const duration = Date.now() - start;
         logger.info(`Populated persistent checksum cache in ${(duration / 1000).toFixed(1)}s`);
+        return result;
     }
     /**
      * Instance-wide watch on the latest available checkpoint (op_id + lsn).
@@ -597,23 +614,45 @@ export class MongoSyncBucketStorage extends BaseObserver {
         }
         // We only watch changes to the active sync rules.
         // If it changes to inactive, we abort and restart with the new sync rules.
-        let lastOp = null;
-        for await (const _ of stream) {
-            if (signal.aborted) {
-                break;
-            }
-            const op = await this.getCheckpointInternal();
-            if (op == null) {
-                // Sync rules have changed - abort and restart.
-                // We do a soft close of the stream here - no error
-                break;
-            }
-            // Check for LSN / checkpoint changes - ignore other metadata changes
-            if (lastOp == null || op.lsn != lastOp.lsn || op.checkpoint != lastOp.checkpoint) {
-                lastOp = op;
+        try {
+            while (true) {
+                // If the stream is idle, we wait a max of a minute (CHECKPOINT_TIMEOUT_MS)
+                // before we get another checkpoint, to avoid stale checkpoint snapshots.
+                const timeout = timers
+                    .setTimeout(CHECKPOINT_TIMEOUT_MS, { done: false }, { signal })
+                    .catch(() => ({ done: true }));
+                try {
+                    const result = await Promise.race([stream.next(), timeout]);
+                    if (result.done) {
+                        break;
+                    }
+                }
+                catch (e) {
+                    if (e.name == 'AbortError') {
+                        break;
+                    }
+                    throw e;
+                }
+                if (signal.aborted) {
+                    // Would likely have been caught by the signal on the timeout or the upstream stream, but we check here anyway
+                    break;
+                }
+                const op = await this.getCheckpointInternal();
+                if (op == null) {
+                    // Sync rules have changed - abort and restart.
+                    // We do a soft close of the stream here - no error
+                    break;
+                }
+                // Previously, we only yielded when the checkpoint or lsn changed.
+                // However, we always want to use the latest snapshotTime, so we skip that filtering here.
+                // That filtering could be added in the per-user streams if needed, but in general the capped collection
+                // should already only contain useful changes in most cases.
                 yield op;
             }
         }
+        finally {
+            await stream.return(null);
+        }
     }
     // Nothing is done here until a subscriber starts to iterate
     sharedIter = new BroadcastIterable((signal) => {
@@ -765,7 +804,9 @@ export class MongoSyncBucketStorage extends BaseObserver {
                 '_id.b': 1
             },
             limit: limit + 1,
-            batchSize: limit + 1,
+            // batchSize is 1 more than limit to auto-close the cursor.
+            // See https://github.com/mongodb/node-mongodb-native/pull/4580
+            batchSize: limit + 2,
             singleBatch: true
         })
             .toArray();
@@ -787,7 +828,9 @@ export class MongoSyncBucketStorage extends BaseObserver {
                 lookup: 1
             },
             limit: limit + 1,
-            batchSize: limit + 1,
+            // batchSize is 1 more than limit to auto-close the cursor.
+            // See https://github.com/mongodb/node-mongodb-native/pull/4580
+            batchSize: limit + 2,
             singleBatch: true
         })
             .toArray();