@platforma-sdk/ui-vue 1.37.4 → 1.37.7

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Files changed (16) hide show
  1. package/.turbo/turbo-build.log +8 -8
  2. package/.turbo/turbo-type-check.log +1 -1
  3. package/CHANGELOG.md +6 -0
  4. package/dist/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue.d.ts +0 -6
  5. package/dist/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue.d.ts.map +1 -1
  6. package/dist/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue2.js +12 -14
  7. package/dist/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue2.js.map +1 -1
  8. package/dist/components/PlMultiSequenceAlignment/data.d.ts +0 -1
  9. package/dist/components/PlMultiSequenceAlignment/data.d.ts.map +1 -1
  10. package/dist/components/PlMultiSequenceAlignment/data.js +115 -116
  11. package/dist/components/PlMultiSequenceAlignment/data.js.map +1 -1
  12. package/dist/sdk/model/dist/index.js +39 -32
  13. package/dist/sdk/model/dist/index.js.map +1 -1
  14. package/package.json +3 -3
  15. package/src/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue +0 -7
  16. package/src/components/PlMultiSequenceAlignment/data.ts +2 -6
package/.turbo/turbo-build.log CHANGED
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   WARN  Issue while reading "/home/runner/_work/platforma/platforma/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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- > @platforma-sdk/ui-vue@1.37.4 build /home/runner/_work/platforma/platforma/sdk/ui-vue
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+ > @platforma-sdk/ui-vue@1.37.7 build /home/runner/_work/platforma/platforma/sdk/ui-vue
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  > vite build
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  vite v6.3.5 building for production...
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  [vite:dts] Start generate declaration files...
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- [vite:dts] Declaration files built in 5037ms.
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+ [vite:dts] Declaration files built in 5093ms.
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  dist/_virtual/re.js  0.08 kB │ gzip: 0.10 kB │ map: 0.09 kB
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  dist/_virtual/lodash2.js  0.09 kB │ gzip: 0.10 kB │ map: 0.09 kB
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  dist/lib/ui/uikit/dist/node_modules/.pnpm/d3-selection@3.0.0/node_modules/d3-selection/src/constant.js  0.12 kB │ gzip: 0.12 kB │ map: 0.40 kB
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  dist/lib/ui/uikit/dist/node_modules/.pnpm/d3-scale@4.0.2/node_modules/d3-scale/src/constant.js  0.12 kB │ gzip: 0.12 kB │ map: 0.40 kB
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  dist/components/PlAgDataTable/PlAgOverlayLoading.vue2.js  0.12 kB │ gzip: 0.12 kB │ map: 0.11 kB
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- dist/components/PlTableFilters/PlTableFilterEntry.vue2.js  0.12 kB │ gzip: 0.12 kB │ map: 0.11 kB
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  dist/components/PlAgRowNumCheckbox/PlAgRowNumCheckbox.vue2.js  0.12 kB │ gzip: 0.12 kB │ map: 0.11 kB
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+ dist/components/PlTableFilters/PlTableFilterEntry.vue2.js  0.12 kB │ gzip: 0.12 kB │ map: 0.11 kB
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  dist/plugins/Monetization/MonetizationSidebar.vue2.js  0.13 kB │ gzip: 0.12 kB │ map: 0.11 kB
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- dist/components/PlAgTextAndButtonCell/PlAgTextAndButtonCell.vue2.js  0.13 kB │ gzip: 0.12 kB │ map: 0.11 kB
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  dist/components/PlAgGridColumnManager/PlAgGridColumnManager.vue2.js  0.13 kB │ gzip: 0.12 kB │ map: 0.11 kB
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+ dist/components/PlAgTextAndButtonCell/PlAgTextAndButtonCell.vue2.js  0.13 kB │ gzip: 0.12 kB │ map: 0.11 kB
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  dist/lib/ui/uikit/dist/components/PlRadio/keys.js  0.13 kB │ gzip: 0.13 kB │ map: 0.46 kB
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  dist/lib/ui/uikit/dist/node_modules/.pnpm/d3-selection@3.0.0/node_modules/d3-selection/src/selection/size.js  0.13 kB │ gzip: 0.13 kB │ map: 0.49 kB
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  dist/components/ValueOrErrorsComponent.vue2.js  0.13 kB │ gzip: 0.12 kB │ map: 0.11 kB
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  dist/lib/ui/uikit/dist/layout/PlBlockPage/PlBlockPage.vue.js  3.28 kB │ gzip: 1.34 kB │ map: 2.13 kB
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  dist/lib/ui/uikit/dist/components/PlEditableTitle/pl-editable-title.module.scss.js  3.31 kB │ gzip: 1.18 kB │ map: 0.13 kB
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  dist/components/PlAgColumnHeader/PlAgColumnHeader.vue.js  3.32 kB │ gzip: 1.34 kB │ map: 4.05 kB
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- dist/sdk/model/dist/index.js  3.35 kB │ gzip: 1.38 kB │ map: 39.87 kB
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  dist/components/PlElementList/PlElementListItem.vue3.js  3.36 kB │ gzip: 1.24 kB │ map: 0.12 kB
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  dist/lib/ui/uikit/dist/generated/icons-24.js  3.37 kB │ gzip: 1.08 kB │ map: 5.77 kB
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  dist/lib/ui/uikit/dist/components/PlBtnDanger/PlBtnDanger.vue.js  3.47 kB │ gzip: 1.34 kB │ map: 1.23 kB
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  dist/lib/ui/uikit/dist/components/PlFileDialog/PlFileDialog.vue.js  3.51 kB │ gzip: 1.39 kB │ map: 4.61 kB
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  dist/lib/ui/uikit/dist/components/PlBtnSecondary/PlBtnSecondary.vue.js  3.54 kB │ gzip: 1.34 kB │ map: 1.25 kB
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  dist/lib/ui/uikit/dist/components/PlBtnPrimary/PlBtnPrimary.vue.js  3.56 kB │ gzip: 1.33 kB │ map: 1.24 kB
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+ dist/sdk/model/dist/index.js  3.56 kB │ gzip: 1.45 kB │ map: 51.35 kB
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  dist/components/PlAppErrorNotificationAlert/PlAppErrorNotificationAlert.vue.js  3.59 kB │ gzip: 1.43 kB │ map: 2.78 kB
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  dist/components/PlElementList/PlElementListItem.vue2.js  3.64 kB │ gzip: 1.13 kB │ map: 5.88 kB
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  dist/node_modules/.pnpm/semver@7.7.2/node_modules/semver/index.js  3.67 kB │ gzip: 1.01 kB │ map: 5.45 kB
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  dist/node_modules/.pnpm/@vueuse_core@13.3.0_vue@3.5.13_typescript@5.5.4_/node_modules/@vueuse/core/index.js  6.00 kB │ gzip: 2.30 kB │ map: 253.66 kB
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  dist/components/PlAgGridColumnManager/PlAgGridColumnManager.vue.js  6.19 kB │ gzip: 2.18 kB │ map: 4.91 kB
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+ dist/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue2.js  6.38 kB │ gzip: 2.02 kB │ map: 9.82 kB
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  dist/components/PlTableFilters/PlTableFilterEntry.vue.js  6.41 kB │ gzip: 1.44 kB │ map: 5.04 kB
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- dist/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue2.js  6.49 kB │ gzip: 2.04 kB │ map: 10.17 kB
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  dist/lib/ui/uikit/dist/components/PlBtnSplit/PlBtnSplit.vue.js  7.12 kB │ gzip: 2.57 kB │ map: 8.61 kB
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  dist/components/PlAgDataTable/sources/table-source-v2.js  7.17 kB │ gzip: 2.62 kB │ map: 20.17 kB
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  dist/node_modules/.pnpm/semver@7.7.2/node_modules/semver/classes/range.js  7.70 kB │ gzip: 2.49 kB │ map: 25.67 kB
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+ dist/components/PlMultiSequenceAlignment/data.js  8.21 kB │ gzip: 2.59 kB │ map: 22.37 kB
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  dist/components/PlElementList/PlElementList.vue2.js  8.22 kB │ gzip: 2.35 kB │ map: 14.85 kB
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- dist/components/PlMultiSequenceAlignment/data.js  8.23 kB │ gzip: 2.60 kB │ map: 22.57 kB
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  dist/lib/ui/uikit/dist/components/SliderRangeTriple.vue.js  8.52 kB │ gzip: 2.46 kB │ map: 15.56 kB
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  dist/lib/ui/uikit/dist/components/PlTextField/PlTextField.vue.js  8.71 kB │ gzip: 2.89 kB │ map: 8.77 kB
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  dist/lib/ui/uikit/dist/components/PlFileDialog/Remote.vue.js  8.72 kB │ gzip: 2.80 kB │ map: 14.28 kB
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  dist/lib/ui/uikit/dist/index.js 497.32 kB │ gzip: 191.64 kB │ map: 0.18 kB
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  dist/lib/ui/uikit/dist/components/PlSlideModal/PlSlideModal.vue.js 601.36 kB │ gzip: 204.40 kB │ map: 0.23 kB
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  dist/lib/ui/uikit/dist/components/DataTable/TableComponent.vue.js 602.69 kB │ gzip: 204.99 kB │ map: 0.27 kB
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package/.turbo/turbo-type-check.log CHANGED
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   WARN  Issue while reading "/home/runner/_work/platforma/platforma/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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- > @platforma-sdk/ui-vue@1.37.4 type-check /home/runner/_work/platforma/platforma/sdk/ui-vue
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+ > @platforma-sdk/ui-vue@1.37.7 type-check /home/runner/_work/platforma/platforma/sdk/ui-vue
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  > vue-tsc --noEmit --project ./tsconfig.json
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package/CHANGELOG.md CHANGED
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  # @platforma-sdk/ui-vue
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+ ## 1.37.7
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+ ### Patch Changes
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+
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+ - 30d7dc8: MSA: find linker columns automatically
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  ## 1.37.4
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  ### Patch Changes
package/dist/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue.d.ts CHANGED
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  * By default, all sequence columns are selected.
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  readonly sequenceColumnPredicate: PColumnPredicate;
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- /**
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- * Sometimes sequence column and label column have disjoint axes.
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- * In this case you have to define `linkerColumnPredicate` to select columns
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- * connecting axes of sequence and label columns.
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- */
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- readonly linkerColumnPredicate?: PColumnPredicate;
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  /**
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  * Row selection model (from `PlAgDataTableV2` or `GraphMaker`).
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  * If not provided or empty, all rows will be considered selected.
package/dist/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue.d.ts.map CHANGED
@@ -1 +1 @@
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+ {"version":3,"file":"PlMultiSequenceAlignment.vue.d.ts","sourceRoot":"","sources":["../../../src/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue"],"names":[],"mappings":"AA4OA,OAAO,KAAK,EACV,gBAAgB,EAChB,YAAY,EACZ,6BAA6B,EAC7B,gBAAgB,EACjB,MAAM,sBAAsB,CAAC;AAwB9B,KAAK,WAAW,GAAG;IACjB;;;OAGG;IACH,QAAQ,CAAC,MAAM,EAAE,YAAY,GAAG,SAAS,CAAC;IAC1C;;;OAGG;IACH,QAAQ,CAAC,uBAAuB,EAAE,gBAAgB,CAAC;IACnD;;;;OAIG;IACH,QAAQ,CAAC,SAAS,CAAC,EAAE,gBAAgB,CAAC;CACvC,CAAC;AAsHF,KAAK,iBAAiB,GAAG;IACzB,UAAU,CAAC,EAAE,6BAA6B,CAAC;CAC1C,GAAG,WAAW,CAAC;;;;;;AAqLhB,wBAOG"}
package/dist/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue2.js CHANGED
@@ -1,9 +1,9 @@
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- import { defineComponent as A, mergeModels as B, useModel as x, onBeforeMount as E, ref as U, reactive as i, computed as c, watchEffect as z, createElementBlock as y, openBlock as s, Fragment as b, createVNode as h, createBlock as p, unref as n, withCtx as d, createTextVNode as S, toDisplayString as v, createCommentVNode as w, normalizeClass as D } from "vue";
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+ import { defineComponent as A, mergeModels as B, useModel as x, onBeforeMount as E, ref as U, reactive as i, computed as c, watchEffect as z, createElementBlock as k, openBlock as s, Fragment as b, createVNode as h, createBlock as p, unref as n, withCtx as d, createTextVNode as S, toDisplayString as v, createCommentVNode as w, normalizeClass as D } from "vue";
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  import "../../lib/ui/uikit/dist/index.js";
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  import { chemicalPropertiesColorMap as j } from "./chemical-properties.js";
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- import { useSequenceColumnsOptions as T, useLabelColumnsOptions as $, useMarkupColumnsOptions as G, useMultipleAlignmentData as H, sequenceLimit as V } from "./data.js";
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+ import { useSequenceColumnsOptions as T, useLabelColumnsOptions as $, useMarkupColumnsOptions as G, useMultipleAlignmentData as H, sequenceLimit as O } from "./data.js";
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  import J from "./Legend.vue.js";
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- import { markupColors as O } from "./markup.js";
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+ import { markupColors as P } from "./markup.js";
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  import { runMigrations as K } from "./migrations.js";
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  import Q from "./MultiSequenceAlignmentView.vue.js";
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  import { defaultSettings as R } from "./settings.js";
@@ -15,7 +15,6 @@ const me = /* @__PURE__ */ A({
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  props: /* @__PURE__ */ B({
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  pFrame: {},
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  sequenceColumnPredicate: { type: Function },
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- linkerColumnPredicate: { type: Function },
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  selection: {}
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  }, {
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  modelValue: { default: {} },
@@ -51,9 +50,8 @@ const me = /* @__PURE__ */ A({
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  sequenceColumnIds: m.value,
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  labelColumnIds: q.value,
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  markupColumnId: o.value.colorScheme.type === "markup" ? o.value.colorScheme.columnId : void 0,
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- linkerColumnPredicate: r.linkerColumnPredicate,
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  selection: r.selection
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- }))), k = new Intl.NumberFormat("en").format, L = c(
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+ }))), y = new Intl.NumberFormat("en").format, L = c(
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  () => [
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  {
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  label: "Chemical Properties",
@@ -92,7 +90,7 @@ const me = /* @__PURE__ */ A({
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  ((l = t.data.markup) == null ? void 0 : l.labels) ?? {}
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  ).map(([e, a], N) => [
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  e,
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- { label: a, color: O[N % O.length] }
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+ { label: a, color: P[N % P.length] }
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  ])
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  )
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  };
@@ -104,10 +102,10 @@ const me = /* @__PURE__ */ A({
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  const l = o.value.colorScheme.type === "markup" ? o.value.colorScheme.columnId : void 0;
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  l && g.data.every(({ value: e }) => e !== l) && (o.value.colorScheme = { type: "no-color" });
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  });
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- const P = c(
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+ const V = c(
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  () => f.error ?? C.error ?? g.error ?? t.error
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  );
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- return (l, e) => (s(), y(b, null, [
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+ return (l, e) => (s(), k(b, null, [
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  h(W, {
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  "sequence-columns": m.value,
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  "onUpdate:sequenceColumns": e[0] || (e[0] = (a) => m.value = a),
@@ -119,12 +117,12 @@ const me = /* @__PURE__ */ A({
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  "label-column-options": C.data.options,
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  "color-scheme-options": L.value
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  }, null, 8, ["sequence-columns", "label-columns", "settings", "sequence-column-options", "label-column-options", "color-scheme-options"]),
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- P.value ? (s(), p(n(I), {
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+ V.value ? (s(), p(n(I), {
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  key: 0,
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  type: "error"
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  }, {
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  default: d(() => [
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- S(v(P.value), 1)
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+ S(v(V.value), 1)
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  ]),
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  _: 1
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  })) : !t.loading && t.data.sequences.length < 2 ? (s(), p(n(I), {
@@ -136,7 +134,7 @@ const me = /* @__PURE__ */ A({
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  S(" Please select at least one sequence column and two or more rows to run alignment ")
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  ])),
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  _: 1
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- })) : (s(), y(b, { key: 2 }, [
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+ })) : (s(), k(b, { key: 2 }, [
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  t.data.exceedsLimit ? (s(), p(n(I), {
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  key: 0,
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  type: "warn",
@@ -144,7 +142,7 @@ const me = /* @__PURE__ */ A({
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  label: "Visualization is limited"
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  }, {
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  default: d(() => [
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- S(" MSA visualization supports " + v(n(k)(2)) + " to " + v(n(k)(n(V))) + " sequences. Only the first " + v(n(k)(n(V))) + " will be displayed. ", 1)
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+ S(" MSA visualization supports " + v(n(y)(2)) + " to " + v(n(y)(n(O))) + " sequences. Only the first " + v(n(y)(n(O))) + " will be displayed. ", 1)
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  ]),
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  _: 1
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  })) : w("", !0),
@@ -154,7 +152,7 @@ const me = /* @__PURE__ */ A({
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  loading: t.loading
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  }, {
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  default: d(() => [
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- t.data.sequences.length ? (s(), y(b, { key: 0 }, [
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+ t.data.sequences.length ? (s(), k(b, { key: 0 }, [
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  h(Q, {
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  "sequence-rows": t.data.sequences,
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  "label-rows": t.data.labels,
package/dist/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue2.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"PlMultiSequenceAlignment.vue2.js","sources":["../../../src/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue"],"sourcesContent":["<script lang=\"ts\" setup>\nimport type { ListOptionNormalized } from '@milaboratories/uikit';\nimport { PlAlert, PlSplash } from '@milaboratories/uikit';\nimport type {\n PColumnPredicate,\n PFrameHandle,\n PlMultiSequenceAlignmentModel,\n PlSelectionModel,\n} from '@platforma-sdk/model';\nimport { computed, onBeforeMount, reactive, ref, watchEffect } from 'vue';\nimport { chemicalPropertiesColorMap } from './chemical-properties';\nimport {\n sequenceLimit,\n useLabelColumnsOptions,\n useMarkupColumnsOptions,\n useMultipleAlignmentData,\n useSequenceColumnsOptions,\n} from './data';\nimport Legend from './Legend.vue';\nimport { markupColors } from './markup';\nimport { runMigrations } from './migrations';\nimport MultiSequenceAlignmentView from './MultiSequenceAlignmentView.vue';\nimport { defaultSettings } from './settings';\nimport Toolbar from './Toolbar.vue';\nimport type { ColorScheme, ColorSchemeOption } from './types';\n\nconst model = defineModel<PlMultiSequenceAlignmentModel>({ default: {} });\n\nonBeforeMount(() => {\n runMigrations(model);\n});\n\nconst props = defineProps<{\n /**\n * Handle to PFrame created using `createPFrameForGraphs`.\n * Should contain all desired sequence and label columns.\n */\n readonly pFrame: PFrameHandle | undefined;\n /**\n * Return true if column should be shown in sequence columns dropdown.\n * By default, all sequence columns are selected.\n */\n readonly sequenceColumnPredicate: PColumnPredicate;\n /**\n * Sometimes sequence column and label column have disjoint axes.\n * In this case you have to define `linkerColumnPredicate` to select columns\n * connecting axes of sequence and label columns.\n */\n readonly linkerColumnPredicate?: PColumnPredicate;\n /**\n * Row selection model (from `PlAgDataTableV2` or `GraphMaker`).\n * If not provided or empty, all rows will be considered selected.\n * Warning: should be forwarded as a field of `reactive` object\n */\n readonly selection?: PlSelectionModel;\n}>();\n\nconst settings = ref(defaultSettings);\n\nconst sequenceColumns = reactive(useSequenceColumnsOptions(() => ({\n pFrame: props.pFrame,\n sequenceColumnPredicate: props.sequenceColumnPredicate,\n})));\n\nconst selectedSequenceColumnIds = computed({\n get: () => model.value.sequenceColumnIds ?? 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package/dist/components/PlMultiSequenceAlignment/data.d.ts CHANGED
@@ -29,7 +29,6 @@ export declare function useMultipleAlignmentData(params: MaybeRefOrGetter<{
29
29
  sequenceColumnIds: PObjectId[];
30
30
  labelColumnIds: PTableColumnId[];
31
31
  markupColumnId: PObjectId | undefined;
32
- linkerColumnPredicate: PColumnPredicate | undefined;
33
32
  selection: PlSelectionModel | undefined;
34
33
  }>): {
35
34
  data: import('vue').ComputedRef<MultipleAlignmentData>;
package/dist/components/PlMultiSequenceAlignment/data.d.ts.map CHANGED
@@ -1 +1 @@
1
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