@platforma-sdk/ui-vue 1.34.18 → 1.35.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (44) hide show
  1. package/CHANGELOG.md +6 -0
  2. package/dist/lib.css +1 -1
  3. package/dist/lib.js +7004 -6818
  4. package/dist/lib.js.map +1 -1
  5. package/dist/src/components/PlMultiSequenceAlignment/Consensus.vue.d.ts.map +1 -1
  6. package/dist/src/components/PlMultiSequenceAlignment/Legend.vue.d.ts +5 -1
  7. package/dist/src/components/PlMultiSequenceAlignment/Legend.vue.d.ts.map +1 -1
  8. package/dist/src/components/PlMultiSequenceAlignment/MultiSequenceAlignmentView.vue.d.ts +5 -0
  9. package/dist/src/components/PlMultiSequenceAlignment/MultiSequenceAlignmentView.vue.d.ts.map +1 -1
  10. package/dist/src/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue.d.ts.map +1 -1
  11. package/dist/src/components/PlMultiSequenceAlignment/Toolbar.vue.d.ts +4 -2
  12. package/dist/src/components/PlMultiSequenceAlignment/Toolbar.vue.d.ts.map +1 -1
  13. package/dist/src/components/PlMultiSequenceAlignment/chemical-properties.d.ts +9 -0
  14. package/dist/src/components/PlMultiSequenceAlignment/chemical-properties.d.ts.map +1 -0
  15. package/dist/src/components/PlMultiSequenceAlignment/data.d.ts +32 -33
  16. package/dist/src/components/PlMultiSequenceAlignment/data.d.ts.map +1 -1
  17. package/dist/src/components/PlMultiSequenceAlignment/markup.d.ts +15 -0
  18. package/dist/src/components/PlMultiSequenceAlignment/markup.d.ts.map +1 -0
  19. package/dist/src/components/PlMultiSequenceAlignment/settings.d.ts +2 -2
  20. package/dist/src/components/PlMultiSequenceAlignment/settings.d.ts.map +1 -1
  21. package/dist/src/components/PlMultiSequenceAlignment/types.d.ts +17 -1
  22. package/dist/src/components/PlMultiSequenceAlignment/types.d.ts.map +1 -1
  23. package/dist/src/components/PlMultiSequenceAlignment/useMiPlots.d.ts.map +1 -1
  24. package/dist/tsconfig.lib.tsbuildinfo +1 -1
  25. package/package.json +5 -5
  26. package/src/components/PlMultiSequenceAlignment/Consensus.vue +5 -5
  27. package/src/components/PlMultiSequenceAlignment/Legend.vue +9 -9
  28. package/src/components/PlMultiSequenceAlignment/MultiSequenceAlignmentView.vue +31 -40
  29. package/src/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue +110 -18
  30. package/src/components/PlMultiSequenceAlignment/Toolbar.vue +9 -10
  31. package/src/components/PlMultiSequenceAlignment/{highlight/chemical-properties.ts → chemical-properties.ts} +71 -68
  32. package/src/components/PlMultiSequenceAlignment/data.ts +159 -42
  33. package/src/components/PlMultiSequenceAlignment/markup.ts +107 -0
  34. package/src/components/PlMultiSequenceAlignment/settings.ts +2 -2
  35. package/src/components/PlMultiSequenceAlignment/types.ts +13 -1
  36. package/src/components/PlMultiSequenceAlignment/useMiPlots.ts +1 -2
  37. package/dist/src/components/PlMultiSequenceAlignment/highlight/chemical-properties.d.ts +0 -20
  38. package/dist/src/components/PlMultiSequenceAlignment/highlight/chemical-properties.d.ts.map +0 -1
  39. package/dist/src/components/PlMultiSequenceAlignment/highlight/index.d.ts +0 -7
  40. package/dist/src/components/PlMultiSequenceAlignment/highlight/index.d.ts.map +0 -1
  41. package/dist/src/components/PlMultiSequenceAlignment/highlight/types.d.ts +0 -8
  42. package/dist/src/components/PlMultiSequenceAlignment/highlight/types.d.ts.map +0 -1
  43. package/src/components/PlMultiSequenceAlignment/highlight/index.ts +0 -33
  44. package/src/components/PlMultiSequenceAlignment/highlight/types.ts +0 -7
@@ -1 +1 @@
1
- {"version":3,"file":"Consensus.vue.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/Consensus.vue"],"names":[],"mappings":"AA2MA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,SAAS,CAAC;AAM7C,KAAK,WAAW,GAAG;IACjB,aAAa,EAAE,aAAa,CAAC;CAC9B,CAAC;;;;AA2MF,wBAQG"}
1
+ {"version":3,"file":"Consensus.vue.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/Consensus.vue"],"names":[],"mappings":"AA4MA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,SAAS,CAAC;AAK7C,KAAK,WAAW,GAAG;IACjB,aAAa,EAAE,aAAa,CAAC;CAC9B,CAAC;;;;AA2MF,wBAQG"}
@@ -1,3 +1,7 @@
1
- declare const _default: import("vue").DefineComponent<{}, {}, {}, {}, {}, import("vue").ComponentOptionsMixin, import("vue").ComponentOptionsMixin, {}, string, import("vue").PublicProps, Readonly<{}> & Readonly<{}>, {}, {}, {}, {}, string, import("vue").ComponentProvideOptions, true, {}, HTMLDivElement>;
1
+ import type { ColorMap } from './types';
2
+ type __VLS_Props = {
3
+ colors: ColorMap;
4
+ };
5
+ declare const _default: import("vue").DefineComponent<__VLS_Props, {}, {}, {}, {}, import("vue").ComponentOptionsMixin, import("vue").ComponentOptionsMixin, {}, string, import("vue").PublicProps, Readonly<__VLS_Props> & Readonly<{}>, {}, {}, {}, {}, string, import("vue").ComponentProvideOptions, false, {}, HTMLDivElement>;
2
6
  export default _default;
3
7
  //# sourceMappingURL=Legend.vue.d.ts.map
@@ -1 +1 @@
1
- {"version":3,"file":"Legend.vue.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/Legend.vue"],"names":[],"mappings":";AAmHA,wBAMG"}
1
+ {"version":3,"file":"Legend.vue.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/Legend.vue"],"names":[],"mappings":"AAAA,OA6CO,KAAK,EAAE,QAAQ,EAAE,MAAM,SAAS,CAAC;AAIxC,KAAK,WAAW,GAAG;IACjB,MAAM,EAAE,QAAQ,CAAC;CAClB,CAAC;;AA+DF,wBAOG"}
@@ -1,7 +1,12 @@
1
+ import { type Markup } from './markup';
1
2
  import type { ColorScheme } from './types';
2
3
  type __VLS_Props = {
3
4
  sequenceRows: string[][];
4
5
  labelRows: string[][];
6
+ markup: {
7
+ labels: Record<string, string>;
8
+ data: Markup[];
9
+ } | undefined;
5
10
  colorScheme: ColorScheme;
6
11
  consensus: boolean;
7
12
  seqLogo: boolean;
@@ -1 +1 @@
1
- {"version":3,"file":"MultiSequenceAlignmentView.vue.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/MultiSequenceAlignmentView.vue"],"names":[],"mappings":"AAyKA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,SAAS,CAAC;AAI3C,KAAK,WAAW,GAAG;IACjB,YAAY,EAAE,MAAM,EAAE,EAAE,CAAC;IACzB,SAAS,EAAE,MAAM,EAAE,EAAE,CAAC;IACtB,WAAW,EAAE,WAAW,CAAC;IACzB,SAAS,EAAE,OAAO,CAAC;IACnB,OAAO,EAAE,OAAO,CAAC;CAClB,CAAC;;AAgJF,wBAOG"}
1
+ {"version":3,"file":"MultiSequenceAlignmentView.vue.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/MultiSequenceAlignmentView.vue"],"names":[],"mappings":"AA4JA,OAAO,EAA6B,KAAK,MAAM,EAAE,MAAM,UAAU,CAAC;AAGlE,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,SAAS,CAAC;AAI3C,KAAK,WAAW,GAAG;IACjB,YAAY,EAAE,MAAM,EAAE,EAAE,CAAC;IACzB,SAAS,EAAE,MAAM,EAAE,EAAE,CAAC;IACtB,MAAM,EAAE;QACN,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;QAC/B,IAAI,EAAE,MAAM,EAAE,CAAC;KAChB,GAAG,SAAS,CAAC;IACd,WAAW,EAAE,WAAW,CAAC;IACzB,SAAS,EAAE,OAAO,CAAC;IACnB,OAAO,EAAE,OAAO,CAAC;CAClB,CAAC;;AAmIF,wBAOG"}
@@ -1 +1 @@
1
- {"version":3,"file":"PlMultiSequenceAlignment.vue.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue"],"names":[],"mappings":"AAgKA,OAAO,KAAK,EACV,gBAAgB,EAChB,YAAY,EACZ,6BAA6B,EAC7B,gBAAgB,EACjB,MAAM,sBAAsB,CAAC;AAsB9B,KAAK,WAAW,GAAG;IACjB;;;OAGG;IACH,QAAQ,CAAC,MAAM,EAAE,YAAY,GAAG,SAAS,CAAC;IAC1C;;;OAGG;IACH,QAAQ,CAAC,uBAAuB,EAAE,gBAAgB,CAAC;IACnD;;;OAGG;IACH,QAAQ,CAAC,0BAA0B,CAAC,EAAE,gBAAgB,CAAC;IACvD;;;;OAIG;IACH,QAAQ,CAAC,qBAAqB,CAAC,EAAE,gBAAgB,CAAC;IAClD;;;;OAIG;IACH,QAAQ,CAAC,SAAS,CAAC,EAAE,gBAAgB,CAAC;CACvC,CAAC;AAoDF,KAAK,iBAAiB,GAAG;IACzB,UAAU,CAAC,EAAE,6BAA6B,CAAC;CAC1C,GAAG,WAAW,CAAC;;;;;;AA8HhB,wBAOG"}
1
+ {"version":3,"file":"PlMultiSequenceAlignment.vue.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/PlMultiSequenceAlignment.vue"],"names":[],"mappings":"AA6PA,OAAO,KAAK,EACV,gBAAgB,EAChB,YAAY,EACZ,6BAA6B,EAC7B,gBAAgB,EACjB,MAAM,sBAAsB,CAAC;AA0B9B,KAAK,WAAW,GAAG;IACjB;;;OAGG;IACH,QAAQ,CAAC,MAAM,EAAE,YAAY,GAAG,SAAS,CAAC;IAC1C;;;OAGG;IACH,QAAQ,CAAC,uBAAuB,EAAE,gBAAgB,CAAC;IACnD;;;OAGG;IACH,QAAQ,CAAC,0BAA0B,CAAC,EAAE,gBAAgB,CAAC;IACvD;;;;OAIG;IACH,QAAQ,CAAC,qBAAqB,CAAC,EAAE,gBAAgB,CAAC;IAClD;;;;OAIG;IACH,QAAQ,CAAC,SAAS,CAAC,EAAE,gBAAgB,CAAC;CACvC,CAAC;AAgIF,KAAK,iBAAiB,GAAG;IACzB,UAAU,CAAC,EAAE,6BAA6B,CAAC;CAC1C,GAAG,WAAW,CAAC;;;;;;AA8IhB,wBAOG"}
@@ -1,9 +1,11 @@
1
1
  import { type ListOptionNormalized } from '@milaboratories/uikit';
2
2
  import type { PObjectId, PTableColumnId } from '@platforma-sdk/model';
3
3
  import type { Settings } from './settings';
4
+ import type { ColorSchemeOption } from './types';
4
5
  type __VLS_Props = {
5
6
  sequenceColumnOptions: ListOptionNormalized<PObjectId>[];
6
7
  labelColumnOptions: ListOptionNormalized<PTableColumnId>[];
8
+ colorSchemeOptions: ListOptionNormalized<ColorSchemeOption>[];
7
9
  };
8
10
  type __VLS_PublicProps = {
9
11
  'sequenceColumns': PObjectId[];
@@ -14,7 +16,7 @@ declare const _default: import("vue").DefineComponent<__VLS_PublicProps, {}, {},
14
16
  "update:sequenceColumns": (value: PObjectId[]) => any;
15
17
  "update:labelColumns": (value: PTableColumnId[]) => any;
16
18
  "update:settings": (value: {
17
- colorScheme: import("./types").ColorScheme;
19
+ colorScheme: ColorSchemeOption;
18
20
  consensus: boolean;
19
21
  seqLogo: boolean;
20
22
  legend: boolean;
@@ -23,7 +25,7 @@ declare const _default: import("vue").DefineComponent<__VLS_PublicProps, {}, {},
23
25
  "onUpdate:sequenceColumns"?: ((value: PObjectId[]) => any) | undefined;
24
26
  "onUpdate:labelColumns"?: ((value: PTableColumnId[]) => any) | undefined;
25
27
  "onUpdate:settings"?: ((value: {
26
- colorScheme: import("./types").ColorScheme;
28
+ colorScheme: ColorSchemeOption;
27
29
  consensus: boolean;
28
30
  seqLogo: boolean;
29
31
  legend: boolean;
@@ -1 +1 @@
1
- {"version":3,"file":"Toolbar.vue.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/Toolbar.vue"],"names":[],"mappings":"AAAA,OAyGO,EACL,KAAK,oBAAoB,EAK1B,MAAM,uBAAuB,CAAC;AAC/B,OAAO,KAAK,EAAE,SAAS,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtE,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AAmB3C,KAAK,WAAW,GAAG;IACjB,qBAAqB,EAAE,oBAAoB,CAAC,SAAS,CAAC,EAAE,CAAC;IACzD,kBAAkB,EAAE,oBAAoB,CAAC,cAAc,CAAC,EAAE,CAAC;CAC5D,CAAC;AAUF,KAAK,iBAAiB,GAAG;IACzB,iBAAiB,EAAE,SAAS,EAAE,CAAC;IAC/B,cAAc,EAAE,cAAc,EAAE,CAAC;IACjC,UAAU,EAAE,QAAQ,CAAC;CACpB,GAAG,WAAW,CAAC;;;;;;;;;;;;;;;;;;;;AA0JhB,wBAQG"}
1
+ {"version":3,"file":"Toolbar.vue.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/Toolbar.vue"],"names":[],"mappings":"AAAA,OAwGO,EACL,KAAK,oBAAoB,EAK1B,MAAM,uBAAuB,CAAC;AAC/B,OAAO,KAAK,EAAE,SAAS,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;AACtE,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAC;AAC3C,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,SAAS,CAAC;AAmBjD,KAAK,WAAW,GAAG;IACjB,qBAAqB,EAAE,oBAAoB,CAAC,SAAS,CAAC,EAAE,CAAC;IACzD,kBAAkB,EAAE,oBAAoB,CAAC,cAAc,CAAC,EAAE,CAAC;IAC3D,kBAAkB,EAAE,oBAAoB,CAAC,iBAAiB,CAAC,EAAE,CAAC;CAC/D,CAAC;AAUF,KAAK,iBAAiB,GAAG;IACzB,iBAAiB,EAAE,SAAS,EAAE,CAAC;IAC/B,cAAc,EAAE,cAAc,EAAE,CAAC;IACjC,UAAU,EAAE,QAAQ,CAAC;CACpB,GAAG,WAAW,CAAC;;;;;;;;;;;;;;;;;;;;AA0IhB,wBAQG"}
@@ -0,0 +1,9 @@
1
+ import type { ColorMap, ResidueCounts } from './types';
2
+ export declare const chemicalPropertiesColorMap: ColorMap;
3
+ export type ChemicalCategory = keyof typeof chemicalPropertiesColorMap;
4
+ export declare function colorizeSequencesByChemicalProperties({ sequences, residueCounts, colorMap }: {
5
+ sequences: string[];
6
+ residueCounts: ResidueCounts;
7
+ colorMap: ColorMap;
8
+ }): Promise<Blob>;
9
+ //# sourceMappingURL=chemical-properties.d.ts.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"chemical-properties.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/chemical-properties.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,QAAQ,EAAE,aAAa,EAAE,MAAM,SAAS,CAAC;AAEvD,eAAO,MAAM,0BAA0B,EAAE,QAiCxC,CAAC;AAEF,MAAM,MAAM,gBAAgB,GAAG,MAAM,OAAO,0BAA0B,CAAC;AAEvE,wBAAgB,qCAAqC,CACnD,EAAE,SAAS,EAAE,aAAa,EAAE,QAAQ,EAAE,EAAE;IACtC,SAAS,EAAE,MAAM,EAAE,CAAC;IACpB,aAAa,EAAE,aAAa,CAAC;IAC7B,QAAQ,EAAE,QAAQ,CAAC;CACpB,GACA,OAAO,CAAC,IAAI,CAAC,CAwBf"}
@@ -1,54 +1,53 @@
1
1
  import type { ListOptionNormalized } from '@milaboratories/uikit';
2
2
  import { type PColumnIdAndSpec, type PColumnPredicate, type PFrameHandle, type PlSelectionModel, type PObjectId, type PTableColumnId } from '@platforma-sdk/model';
3
3
  import { type MaybeRefOrGetter } from 'vue';
4
+ import { type Markup } from './markup';
4
5
  export declare const sequenceLimit = 1000;
5
6
  export declare function useSequenceColumnsOptions(params: MaybeRefOrGetter<{
6
7
  pFrame: PFrameHandle | undefined;
7
8
  sequenceColumnPredicate: PColumnPredicate;
8
- }>): import("vue").Ref<{
9
- options: ListOptionNormalized<PObjectId>[];
10
- defaults: PObjectId[];
11
- } | {
12
- defaults: never[];
13
- options: never[];
14
- }, {
15
- options: ListOptionNormalized<PObjectId>[];
16
- defaults: PObjectId[];
17
- } | {
18
- defaults: never[];
19
- options: never[];
20
- }>;
9
+ }>): {
10
+ data: import("vue").Ref<OptionsWithDefaults<PObjectId>, OptionsWithDefaults<PObjectId>>;
11
+ error: import("vue").ShallowRef<Error | undefined, Error | undefined>;
12
+ };
21
13
  export declare function useLabelColumnsOptions(params: MaybeRefOrGetter<{
22
14
  pFrame: PFrameHandle | undefined;
23
15
  sequenceColumnIds: PObjectId[];
24
16
  labelColumnOptionPredicate: ((column: PColumnIdAndSpec) => boolean) | undefined;
25
- }>): import("vue").Ref<{
26
- defaults: never[];
27
- options: never[];
28
- } | {
29
- options: ListOptionNormalized<PTableColumnId>[];
30
- defaults: PTableColumnId[];
31
- }, {
32
- defaults: never[];
33
- options: never[];
34
- } | {
35
- options: ListOptionNormalized<PTableColumnId>[];
36
- defaults: PTableColumnId[];
37
- }>;
17
+ }>): {
18
+ data: import("vue").Ref<OptionsWithDefaults<PTableColumnId>, OptionsWithDefaults<PTableColumnId>>;
19
+ error: import("vue").ShallowRef<Error | undefined, Error | undefined>;
20
+ };
21
+ export declare function useMarkupColumnsOptions(params: MaybeRefOrGetter<{
22
+ pFrame: PFrameHandle | undefined;
23
+ sequenceColumnIds: PObjectId[];
24
+ }>): {
25
+ data: import("vue").Ref<ListOptionNormalized<PObjectId>[], ListOptionNormalized<PObjectId>[]>;
26
+ error: import("vue").ShallowRef<Error | undefined, Error | undefined>;
27
+ };
38
28
  export declare function useMultipleAlignmentData(params: MaybeRefOrGetter<{
39
29
  pframe: PFrameHandle | undefined;
40
30
  sequenceColumnIds: PObjectId[];
41
31
  labelColumnIds: PTableColumnId[];
32
+ markupColumnId: PObjectId | undefined;
42
33
  linkerColumnPredicate: PColumnPredicate | undefined;
43
34
  selection: PlSelectionModel | undefined;
44
35
  }>): {
45
- data: import("vue").ComputedRef<{
46
- sequences: string[][];
47
- labels: string[][];
48
- } | {
49
- sequences: never[];
50
- labels: never[];
51
- }>;
36
+ data: import("vue").ComputedRef<MultipleAlignmentData>;
37
+ error: import("vue").ShallowRef<Error | undefined, Error | undefined>;
52
38
  loading: import("vue").Ref<boolean, boolean>;
53
39
  };
40
+ type MultipleAlignmentData = {
41
+ sequences: string[][];
42
+ labels: string[][];
43
+ markup?: {
44
+ labels: Record<string, string>;
45
+ data: Markup[];
46
+ };
47
+ };
48
+ type OptionsWithDefaults<T> = {
49
+ options: ListOptionNormalized<T>[];
50
+ defaults: T[];
51
+ };
52
+ export {};
54
53
  //# sourceMappingURL=data.d.ts.map
@@ -1 +1 @@
1
- {"version":3,"file":"data.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/data.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,uBAAuB,CAAC;AAClE,OAAO,EAWL,KAAK,gBAAgB,EACrB,KAAK,gBAAgB,EACrB,KAAK,YAAY,EACjB,KAAK,gBAAgB,EACrB,KAAK,SAAS,EACd,KAAK,cAAc,EAEpB,MAAM,sBAAsB,CAAC;AAE9B,OAAO,EAAE,KAAK,gBAAgB,EAAgB,MAAM,KAAK,CAAC;AAO1D,eAAO,MAAM,aAAa,OAAO,CAAC;AAElC,wBAAgB,yBAAyB,CACvC,MAAM,EAAE,gBAAgB,CAAC;IACvB,MAAM,EAAE,YAAY,GAAG,SAAS,CAAC;IACjC,uBAAuB,EAAE,gBAAgB,CAAC;CAC3C,CAAC;aAgDS,oBAAoB,CAAC,SAAS,CAAC,EAAE;cAChC,SAAS,EAAE;;;;;aADZ,oBAAoB,CAAC,SAAS,CAAC,EAAE;cAChC,SAAS,EAAE;;;;GA3CxB;AAED,wBAAgB,sBAAsB,CACpC,MAAM,EAAE,gBAAgB,CAAC;IACvB,MAAM,EAAE,YAAY,GAAG,SAAS,CAAC;IACjC,iBAAiB,EAAE,SAAS,EAAE,CAAC;IAC/B,0BAA0B,EACtB,CAAC,CAAC,MAAM,EAAE,gBAAgB,KAAK,OAAO,CAAC,GACvC,SAAS,CAAC;CACf,CAAC;;;;aA4DS,oBAAoB,CAAC,cAAc,CAAC,EAAE;cACrC,cAAc,EAAE;;;;;aADjB,oBAAoB,CAAC,cAAc,CAAC,EAAE;cACrC,cAAc,EAAE;GAvD7B;AAED,wBAAgB,wBAAwB,CACtC,MAAM,EAAE,gBAAgB,CAAC;IACvB,MAAM,EAAE,YAAY,GAAG,SAAS,CAAC;IACjC,iBAAiB,EAAE,SAAS,EAAE,CAAC;IAC/B,cAAc,EAAE,cAAc,EAAE,CAAC;IACjC,qBAAqB,EAAE,gBAAgB,GAAG,SAAS,CAAC;IACpD,SAAS,EAAE,gBAAgB,GAAG,SAAS,CAAC;CACzC,CAAC;;mBA0GW,MAAM,EAAE,EAAE;gBACb,MAAM,EAAE,EAAE;;;;;;EAlGrB"}
1
+ {"version":3,"file":"data.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/data.ts"],"names":[],"mappings":"AACA,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,uBAAuB,CAAC;AAClE,OAAO,EAYL,KAAK,gBAAgB,EACrB,KAAK,gBAAgB,EACrB,KAAK,YAAY,EACjB,KAAK,gBAAgB,EACrB,KAAK,SAAS,EACd,KAAK,cAAc,EAEpB,MAAM,sBAAsB,CAAC;AAE9B,OAAO,EAAE,KAAK,gBAAgB,EAA4B,MAAM,KAAK,CAAC;AACtE,OAAO,EAAE,KAAK,MAAM,EAAsC,MAAM,UAAU,CAAC;AAK3E,eAAO,MAAM,aAAa,OAAO,CAAC;AAElC,wBAAgB,yBAAyB,CACvC,MAAM,EAAE,gBAAgB,CAAC;IACvB,MAAM,EAAE,YAAY,GAAG,SAAS,CAAC;IACjC,uBAAuB,EAAE,gBAAgB,CAAC;CAC3C,CAAC;;;EAgBH;AAED,wBAAgB,sBAAsB,CACpC,MAAM,EAAE,gBAAgB,CAAC;IACvB,MAAM,EAAE,YAAY,GAAG,SAAS,CAAC;IACjC,iBAAiB,EAAE,SAAS,EAAE,CAAC;IAC/B,0BAA0B,EACtB,CAAC,CAAC,MAAM,EAAE,gBAAgB,KAAK,OAAO,CAAC,GACvC,SAAS,CAAC;CACf,CAAC;;;EAgBH;AAED,wBAAgB,uBAAuB,CACrC,MAAM,EAAE,gBAAgB,CAAC;IACvB,MAAM,EAAE,YAAY,GAAG,SAAS,CAAC;IACjC,iBAAiB,EAAE,SAAS,EAAE,CAAC;CAChC,CAAC;;;EAgBH;AAED,wBAAgB,wBAAwB,CACtC,MAAM,EAAE,gBAAgB,CAAC;IACvB,MAAM,EAAE,YAAY,GAAG,SAAS,CAAC;IACjC,iBAAiB,EAAE,SAAS,EAAE,CAAC;IAC/B,cAAc,EAAE,cAAc,EAAE,CAAC;IACjC,cAAc,EAAE,SAAS,GAAG,SAAS,CAAC;IACtC,qBAAqB,EAAE,gBAAgB,GAAG,SAAS,CAAC;IACpD,SAAS,EAAE,gBAAgB,GAAG,SAAS,CAAC;CACzC,CAAC;;;;EAkBH;AA+RD,KAAK,qBAAqB,GAAG;IAC3B,SAAS,EAAE,MAAM,EAAE,EAAE,CAAC;IACtB,MAAM,EAAE,MAAM,EAAE,EAAE,CAAC;IACnB,MAAM,CAAC,EAAE;QACP,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;QAC/B,IAAI,EAAE,MAAM,EAAE,CAAC;KAChB,CAAC;CACH,CAAC;AAEF,KAAK,mBAAmB,CAAC,CAAC,IAAI;IAC5B,OAAO,EAAE,oBAAoB,CAAC,CAAC,CAAC,EAAE,CAAC;IACnC,QAAQ,EAAE,CAAC,EAAE,CAAC;CACf,CAAC"}
@@ -0,0 +1,15 @@
1
+ import type { ColorMap } from './types';
2
+ export type Markup = {
3
+ id: string;
4
+ start: number;
5
+ length: number;
6
+ }[];
7
+ export declare function parseMarkup(row: string): Markup;
8
+ export declare function markupAlignedSequence(alignedSequence: string, markup: Markup): Markup;
9
+ export declare function colorizeSequencesByMarkup({ markupRows, columnCount, colorMap }: {
10
+ markupRows: Markup[];
11
+ columnCount: number;
12
+ colorMap: ColorMap;
13
+ }): Promise<Blob>;
14
+ export declare const markupColors: string[];
15
+ //# sourceMappingURL=markup.d.ts.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"markup.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/markup.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,SAAS,CAAC;AAExC,MAAM,MAAM,MAAM,GAAG;IAAE,EAAE,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,MAAM,CAAC;IAAC,MAAM,EAAE,MAAM,CAAA;CAAE,EAAE,CAAC;AAErE,wBAAgB,WAAW,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,CAmB/C;AAED,wBAAgB,qBAAqB,CACnC,eAAe,EAAE,MAAM,EACvB,MAAM,EAAE,MAAM,GACb,MAAM,CAkBR;AAED,wBAAgB,yBAAyB,CACvC,EAAE,UAAU,EAAE,WAAW,EAAE,QAAQ,EAAE,EAAE;IACrC,UAAU,EAAE,MAAM,EAAE,CAAC;IACrB,WAAW,EAAE,MAAM,CAAC;IACpB,QAAQ,EAAE,QAAQ,CAAC;CACpB,GACA,OAAO,CAAC,IAAI,CAAC,CAYf;AAED,eAAO,MAAM,YAAY,UAiBxB,CAAC"}
@@ -1,6 +1,6 @@
1
- import type { ColorScheme } from './types';
1
+ import type { ColorSchemeOption } from './types';
2
2
  export declare const defaultSettings: {
3
- colorScheme: ColorScheme;
3
+ colorScheme: ColorSchemeOption;
4
4
  consensus: boolean;
5
5
  seqLogo: boolean;
6
6
  legend: boolean;
@@ -1 +1 @@
1
- {"version":3,"file":"settings.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/settings.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,SAAS,CAAC;AAE3C,eAAO,MAAM,eAAe;iBACY,WAAW;;;;CAIlD,CAAC;AAEF,MAAM,MAAM,QAAQ,GAAG,OAAO,eAAe,CAAC"}
1
+ {"version":3,"file":"settings.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/settings.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,SAAS,CAAC;AAEjD,eAAO,MAAM,eAAe;iBACsB,iBAAiB;;;;CAIlE,CAAC;AAEF,MAAM,MAAM,QAAQ,GAAG,OAAO,eAAe,CAAC"}
@@ -1,3 +1,19 @@
1
- export type ColorScheme = 'chemical-properties' | 'no-color';
1
+ import type { PObjectId } from '@platforma-sdk/model';
2
+ export type ColorSchemeOption = {
3
+ type: 'no-color';
4
+ } | {
5
+ type: 'chemical-properties';
6
+ } | {
7
+ type: 'markup';
8
+ columnId: PObjectId;
9
+ };
10
+ export type ColorScheme = {
11
+ type: ColorSchemeOption['type'];
12
+ colors: ColorMap;
13
+ };
14
+ export type ColorMap = Record<string, {
15
+ label: string;
16
+ color: string;
17
+ }>;
2
18
  export type ResidueCounts = Record<string, number>[];
3
19
  //# sourceMappingURL=types.d.ts.map
@@ -1 +1 @@
1
- {"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/types.ts"],"names":[],"mappings":"AAAA,MAAM,MAAM,WAAW,GAAG,qBAAqB,GAAG,UAAU,CAAC;AAE7D,MAAM,MAAM,aAAa,GAAG,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,EAAE,CAAC"}
1
+ {"version":3,"file":"types.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/types.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,sBAAsB,CAAC;AAEtD,MAAM,MAAM,iBAAiB,GACzB;IAAE,IAAI,EAAE,UAAU,CAAA;CAAE,GACpB;IAAE,IAAI,EAAE,qBAAqB,CAAA;CAAE,GAC/B;IAAE,IAAI,EAAE,QAAQ,CAAC;IAAC,QAAQ,EAAE,SAAS,CAAA;CAAE,CAAC;AAE5C,MAAM,MAAM,WAAW,GAAG;IACxB,IAAI,EAAE,iBAAiB,CAAC,MAAM,CAAC,CAAC;IAChC,MAAM,EAAE,QAAQ,CAAC;CAClB,CAAC;AAEF,MAAM,MAAM,QAAQ,GAAG,MAAM,CAAC,MAAM,EAAE;IAAE,KAAK,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,MAAM,CAAA;CAAE,CAAC,CAAC;AAExE,MAAM,MAAM,aAAa,GAAG,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,EAAE,CAAC"}
@@ -1 +1 @@
1
- {"version":3,"file":"useMiPlots.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/useMiPlots.ts"],"names":[],"mappings":"AAIA,wBAAgB,UAAU;;;EAmBzB"}
1
+ {"version":3,"file":"useMiPlots.d.ts","sourceRoot":"","sources":["../../../../src/components/PlMultiSequenceAlignment/useMiPlots.ts"],"names":[],"mappings":"AAGA,wBAAgB,UAAU;;;EAmBzB"}