@platforma-sdk/model 1.52.7 → 1.53.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/components/PlMultiSequenceAlignment.cjs.map +1 -1
- package/dist/components/PlMultiSequenceAlignment.d.ts +5 -3
- package/dist/components/PlMultiSequenceAlignment.d.ts.map +1 -1
- package/dist/components/PlMultiSequenceAlignment.js.map +1 -1
- package/dist/package.json.cjs +1 -1
- package/dist/package.json.js +1 -1
- package/package.json +6 -6
- package/src/components/PlMultiSequenceAlignment.ts +12 -8
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@@ -1 +1 @@
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{"version":3,"file":"PlMultiSequenceAlignment.cjs","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"sourcesContent":["import {\n
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{"version":3,"file":"PlMultiSequenceAlignment.cjs","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"sourcesContent":["import type {\n PColumn,\n PColumnIdAndSpec,\n PColumnKey,\n PColumnValues,\n PObjectId,\n PTableColumnId,\n} from '@milaboratories/pl-model-common';\nimport {\n Annotation,\n isPTableAbsent,\n PColumnName,\n stringifyJson,\n uniquePlId,\n ValueType,\n} from '@milaboratories/pl-model-common';\nimport type { PlSelectionModel } from './PlSelectionModel';\n\nexport type PColumnPredicate = (column: PColumnIdAndSpec) =>\n | boolean\n | { default: boolean };\n\nexport interface PlMultiSequenceAlignmentSettings {\n sequenceColumnIds?: PObjectId[];\n labelColumnIds?: PTableColumnId[];\n colorScheme: PlMultiSequenceAlignmentColorSchemeOption;\n widgets: PlMultiSequenceAlignmentWidget[];\n alignmentParams: {\n gpo: number;\n gpe: number;\n tgpe: number;\n };\n}\n\nexport type PlMultiSequenceAlignmentWidget =\n | 'consensus'\n | 'seqLogo'\n | 'tree'\n | 'legend';\n\nexport interface PlMultiSequenceAlignmentModel\n extends Partial<PlMultiSequenceAlignmentSettings> {\n version?: number;\n}\n\nexport type PlMultiSequenceAlignmentColorSchemeOption =\n | { type: 'no-color' }\n | { type: 'chemical-properties' }\n | { type: 'markup'; columnIds: PObjectId[] };\n\nexport function createRowSelectionColumn({\n selection,\n columnId = uniquePlId() as string as PObjectId,\n label = 'Selection marker',\n domain,\n}: {\n selection: PlSelectionModel | undefined;\n columnId?: PObjectId;\n label?: string;\n domain?: Record<string, string>;\n}): PColumn<PColumnValues> | undefined {\n if (!selection?.axesSpec.length) {\n return;\n }\n const data: PColumnValues = selection.selectedKeys\n .filter((r): r is PColumnKey => r.every((v) => !isPTableAbsent(v)))\n .map((r) => ({ key: r, val: 1 }));\n if (!data.length) {\n return;\n }\n return {\n id: columnId,\n spec: {\n kind: 'PColumn',\n valueType: ValueType.Int,\n name: PColumnName.Table.RowSelection,\n axesSpec: selection.axesSpec,\n ...(domain && Object.keys(domain).length && { domain }),\n annotations: {\n [Annotation.Label]: label,\n [Annotation.DiscreteValues]: stringifyJson([1]),\n } satisfies Annotation,\n },\n data,\n };\n}\n"],"names":["uniquePlId","isPTableAbsent","ValueType","PColumnName","Annotation","stringifyJson"],"mappings":";;;;SAkDgB,wBAAwB,CAAC,EACvC,SAAS,EACT,QAAQ,GAAGA,wBAAU,EAAyB,EAC9C,KAAK,GAAG,kBAAkB,EAC1B,MAAM,GAMP,EAAA;AACC,IAAA,IAAI,CAAC,SAAS,EAAE,QAAQ,CAAC,MAAM,EAAE;QAC/B;IACF;AACA,IAAA,MAAM,IAAI,GAAkB,SAAS,CAAC;SACnC,MAAM,CAAC,CAAC,CAAC,KAAsB,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAACC,4BAAc,CAAC,CAAC,CAAC,CAAC;AACjE,SAAA,GAAG,CAAC,CAAC,CAAC,MAAM,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC;AACnC,IAAA,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;QAChB;IACF;IACA,OAAO;AACL,QAAA,EAAE,EAAE,QAAQ;AACZ,QAAA,IAAI,EAAE;AACJ,YAAA,IAAI,EAAE,SAAS;YACf,SAAS,EAAEC,uBAAS,CAAC,GAAG;AACxB,YAAA,IAAI,EAAEC,yBAAW,CAAC,KAAK,CAAC,YAAY;YACpC,QAAQ,EAAE,SAAS,CAAC,QAAQ;AAC5B,YAAA,IAAI,MAAM,IAAI,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,MAAM,IAAI,EAAE,MAAM,EAAE,CAAC;AACvD,YAAA,WAAW,EAAE;AACX,gBAAA,CAACC,wBAAU,CAAC,KAAK,GAAG,KAAK;gBACzB,CAACA,wBAAU,CAAC,cAAc,GAAGC,2BAAa,CAAC,CAAC,CAAC,CAAC,CAAC;AAC3B,aAAA;AACvB,SAAA;QACD,IAAI;KACL;AACH;;;;"}
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import {
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import {
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export type PColumnPredicate = (column: PColumnIdAndSpec) => boolean
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import type { PColumn, PColumnIdAndSpec, PColumnValues, PObjectId, PTableColumnId } from '@milaboratories/pl-model-common';
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import type { PlSelectionModel } from './PlSelectionModel';
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export type PColumnPredicate = (column: PColumnIdAndSpec) => boolean | {
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default: boolean;
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};
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export interface PlMultiSequenceAlignmentSettings {
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sequenceColumnIds?: PObjectId[];
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labelColumnIds?: PTableColumnId[];
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{"version":3,"file":"PlMultiSequenceAlignment.d.ts","sourceRoot":"","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"names":[],"mappings":"AAAA,OAAO,
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{"version":3,"file":"PlMultiSequenceAlignment.d.ts","sourceRoot":"","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EACV,OAAO,EACP,gBAAgB,EAEhB,aAAa,EACb,SAAS,EACT,cAAc,EACf,MAAM,iCAAiC,CAAC;AASzC,OAAO,KAAK,EAAE,gBAAgB,EAAE,MAAM,oBAAoB,CAAC;AAE3D,MAAM,MAAM,gBAAgB,GAAG,CAAC,MAAM,EAAE,gBAAgB,KACpD,OAAO,GACP;IAAE,OAAO,EAAE,OAAO,CAAA;CAAE,CAAC;AAEzB,MAAM,WAAW,gCAAgC;IAC/C,iBAAiB,CAAC,EAAE,SAAS,EAAE,CAAC;IAChC,cAAc,CAAC,EAAE,cAAc,EAAE,CAAC;IAClC,WAAW,EAAE,yCAAyC,CAAC;IACvD,OAAO,EAAE,8BAA8B,EAAE,CAAC;IAC1C,eAAe,EAAE;QACf,GAAG,EAAE,MAAM,CAAC;QACZ,GAAG,EAAE,MAAM,CAAC;QACZ,IAAI,EAAE,MAAM,CAAC;KACd,CAAC;CACH;AAED,MAAM,MAAM,8BAA8B,GACtC,WAAW,GACX,SAAS,GACT,MAAM,GACN,QAAQ,CAAC;AAEb,MAAM,WAAW,6BACf,SAAQ,OAAO,CAAC,gCAAgC,CAAC;IACjD,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAED,MAAM,MAAM,yCAAyC,GACjD;IAAE,IAAI,EAAE,UAAU,CAAA;CAAE,GACpB;IAAE,IAAI,EAAE,qBAAqB,CAAA;CAAE,GAC/B;IAAE,IAAI,EAAE,QAAQ,CAAC;IAAC,SAAS,EAAE,SAAS,EAAE,CAAA;CAAE,CAAC;AAE/C,wBAAgB,wBAAwB,CAAC,EACvC,SAAS,EACT,QAA8C,EAC9C,KAA0B,EAC1B,MAAM,GACP,EAAE;IACD,SAAS,EAAE,gBAAgB,GAAG,SAAS,CAAC;IACxC,QAAQ,CAAC,EAAE,SAAS,CAAC;IACrB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;CACjC,GAAG,OAAO,CAAC,aAAa,CAAC,GAAG,SAAS,CAyBrC"}
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{"version":3,"file":"PlMultiSequenceAlignment.js","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"sourcesContent":["import {\n
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{"version":3,"file":"PlMultiSequenceAlignment.js","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"sourcesContent":["import type {\n PColumn,\n PColumnIdAndSpec,\n PColumnKey,\n PColumnValues,\n PObjectId,\n PTableColumnId,\n} from '@milaboratories/pl-model-common';\nimport {\n Annotation,\n isPTableAbsent,\n PColumnName,\n stringifyJson,\n uniquePlId,\n ValueType,\n} from '@milaboratories/pl-model-common';\nimport type { PlSelectionModel } from './PlSelectionModel';\n\nexport type PColumnPredicate = (column: PColumnIdAndSpec) =>\n | boolean\n | { default: boolean };\n\nexport interface PlMultiSequenceAlignmentSettings {\n sequenceColumnIds?: PObjectId[];\n labelColumnIds?: PTableColumnId[];\n colorScheme: PlMultiSequenceAlignmentColorSchemeOption;\n widgets: PlMultiSequenceAlignmentWidget[];\n alignmentParams: {\n gpo: number;\n gpe: number;\n tgpe: number;\n };\n}\n\nexport type PlMultiSequenceAlignmentWidget =\n | 'consensus'\n | 'seqLogo'\n | 'tree'\n | 'legend';\n\nexport interface PlMultiSequenceAlignmentModel\n extends Partial<PlMultiSequenceAlignmentSettings> {\n version?: number;\n}\n\nexport type PlMultiSequenceAlignmentColorSchemeOption =\n | { type: 'no-color' }\n | { type: 'chemical-properties' }\n | { type: 'markup'; columnIds: PObjectId[] };\n\nexport function createRowSelectionColumn({\n selection,\n columnId = uniquePlId() as string as PObjectId,\n label = 'Selection marker',\n domain,\n}: {\n selection: PlSelectionModel | undefined;\n columnId?: PObjectId;\n label?: string;\n domain?: Record<string, string>;\n}): PColumn<PColumnValues> | undefined {\n if (!selection?.axesSpec.length) {\n return;\n }\n const data: PColumnValues = selection.selectedKeys\n .filter((r): r is PColumnKey => r.every((v) => !isPTableAbsent(v)))\n .map((r) => ({ key: r, val: 1 }));\n if (!data.length) {\n return;\n }\n return {\n id: columnId,\n spec: {\n kind: 'PColumn',\n valueType: ValueType.Int,\n name: PColumnName.Table.RowSelection,\n axesSpec: selection.axesSpec,\n ...(domain && Object.keys(domain).length && { domain }),\n annotations: {\n [Annotation.Label]: label,\n [Annotation.DiscreteValues]: stringifyJson([1]),\n } satisfies Annotation,\n },\n data,\n };\n}\n"],"names":[],"mappings":";;SAkDgB,wBAAwB,CAAC,EACvC,SAAS,EACT,QAAQ,GAAG,UAAU,EAAyB,EAC9C,KAAK,GAAG,kBAAkB,EAC1B,MAAM,GAMP,EAAA;AACC,IAAA,IAAI,CAAC,SAAS,EAAE,QAAQ,CAAC,MAAM,EAAE;QAC/B;IACF;AACA,IAAA,MAAM,IAAI,GAAkB,SAAS,CAAC;SACnC,MAAM,CAAC,CAAC,CAAC,KAAsB,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC;AACjE,SAAA,GAAG,CAAC,CAAC,CAAC,MAAM,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC;AACnC,IAAA,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;QAChB;IACF;IACA,OAAO;AACL,QAAA,EAAE,EAAE,QAAQ;AACZ,QAAA,IAAI,EAAE;AACJ,YAAA,IAAI,EAAE,SAAS;YACf,SAAS,EAAE,SAAS,CAAC,GAAG;AACxB,YAAA,IAAI,EAAE,WAAW,CAAC,KAAK,CAAC,YAAY;YACpC,QAAQ,EAAE,SAAS,CAAC,QAAQ;AAC5B,YAAA,IAAI,MAAM,IAAI,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,MAAM,IAAI,EAAE,MAAM,EAAE,CAAC;AACvD,YAAA,WAAW,EAAE;AACX,gBAAA,CAAC,UAAU,CAAC,KAAK,GAAG,KAAK;gBACzB,CAAC,UAAU,CAAC,cAAc,GAAG,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC;AAC3B,aAAA;AACvB,SAAA;QACD,IAAI;KACL;AACH;;;;"}
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package/dist/package.json.cjs
CHANGED
package/dist/package.json.js
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package/package.json
CHANGED
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{
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"name": "@platforma-sdk/model",
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"version": "1.
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"version": "1.53.0",
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"description": "Platforma.bio SDK / Block Model",
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"type": "module",
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"types": "./dist/index.d.ts",
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"canonicalize": "~2.1.0",
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"es-toolkit": "^1.39.10",
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"zod": "~3.23.8",
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"@milaboratories/
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"@milaboratories/
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"@milaboratories/ptabler-expression-js": "1.1.11",
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"@milaboratories/pl-model-common": "1.24.1",
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"@milaboratories/pl-error-like": "1.12.5"
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},
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"devDependencies": {
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"vitest": "^4.0.16",
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"fast-json-patch": "^3.1.1",
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"@milaboratories/eslint-config": "1.0.5",
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"@milaboratories/build-configs": "1.4.0",
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"@milaboratories/eslint-config": "1.0.5",
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"@milaboratories/helpers": "1.13.0",
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"@milaboratories/ts-configs": "1.2.0"
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},
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import type {
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PColumn,
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PColumnIdAndSpec,
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PColumnKey,
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PColumnValues,
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PObjectId,
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PTableColumnId,
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} from '@milaboratories/pl-model-common';
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import {
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Annotation,
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isPTableAbsent,
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type PColumn,
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type PColumnIdAndSpec,
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type PColumnKey,
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type PColumnValues,
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} from '@milaboratories/pl-model-common';
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import {
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import type { PlSelectionModel } from './PlSelectionModel';
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export interface PlMultiSequenceAlignmentSettings {
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sequenceColumnIds?: PObjectId[];
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