@platforma-sdk/model 1.42.51 → 1.43.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/components/PlMultiSequenceAlignment.cjs.map +1 -1
- package/dist/components/PlMultiSequenceAlignment.d.ts +3 -2
- package/dist/components/PlMultiSequenceAlignment.d.ts.map +1 -1
- package/dist/components/PlMultiSequenceAlignment.js.map +1 -1
- package/dist/package.json.cjs +1 -1
- package/dist/package.json.js +1 -1
- package/package.json +5 -5
- package/src/components/PlMultiSequenceAlignment.ts +8 -2
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{"version":3,"file":"PlMultiSequenceAlignment.cjs","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"sourcesContent":["import {\n Annotation,\n isPTableAbsent,\n type PColumn,\n type PColumnIdAndSpec,\n type PColumnKey,\n PColumnName,\n type PColumnValues,\n type PObjectId,\n type PTableColumnId,\n stringifyJson,\n uniquePlId,\n ValueType,\n} from '@milaboratories/pl-model-common';\nimport { type PlSelectionModel } from './PlSelectionModel';\n\nexport type PColumnPredicate = (column: PColumnIdAndSpec) => boolean;\n\nexport interface PlMultiSequenceAlignmentSettings {\n sequenceColumnIds?: PObjectId[];\n labelColumnIds?: PTableColumnId[];\n colorScheme: PlMultiSequenceAlignmentColorSchemeOption;\n widgets:
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{"version":3,"file":"PlMultiSequenceAlignment.cjs","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"sourcesContent":["import {\n Annotation,\n isPTableAbsent,\n type PColumn,\n type PColumnIdAndSpec,\n type PColumnKey,\n PColumnName,\n type PColumnValues,\n type PObjectId,\n type PTableColumnId,\n stringifyJson,\n uniquePlId,\n ValueType,\n} from '@milaboratories/pl-model-common';\nimport { type PlSelectionModel } from './PlSelectionModel';\n\nexport type PColumnPredicate = (column: PColumnIdAndSpec) => boolean;\n\nexport interface PlMultiSequenceAlignmentSettings {\n sequenceColumnIds?: PObjectId[];\n labelColumnIds?: PTableColumnId[];\n colorScheme: PlMultiSequenceAlignmentColorSchemeOption;\n widgets: PlMultiSequenceAlignmentWidget[];\n alignmentParams: {\n gpo: number;\n gpe: number;\n tgpe: number;\n };\n}\n\nexport type PlMultiSequenceAlignmentWidget =\n | 'consensus'\n | 'seqLogo'\n | 'tree'\n | 'legend';\n\nexport interface PlMultiSequenceAlignmentModel\n extends Partial<PlMultiSequenceAlignmentSettings> {\n version?: number;\n}\n\nexport type PlMultiSequenceAlignmentColorSchemeOption =\n | { type: 'no-color' }\n | { type: 'chemical-properties' }\n | { type: 'markup'; columnIds: PObjectId[] };\n\nexport function createRowSelectionColumn({\n selection,\n columnId = uniquePlId() as string as PObjectId,\n label = 'Selection marker',\n domain,\n}: {\n selection: PlSelectionModel | undefined;\n columnId?: PObjectId;\n label?: string;\n domain?: Record<string, string>;\n}): PColumn<PColumnValues> | undefined {\n if (!selection?.axesSpec.length) {\n return;\n }\n const data: PColumnValues = selection.selectedKeys\n .filter((r): r is PColumnKey => r.every((v) => !isPTableAbsent(v)))\n .map((r) => ({ key: r, val: 1 }));\n if (!data.length) {\n return;\n }\n return {\n id: columnId,\n spec: {\n kind: 'PColumn',\n valueType: ValueType.Int,\n name: PColumnName.Table.RowSelection,\n axesSpec: selection.axesSpec,\n ...(domain && Object.keys(domain).length && { domain }),\n annotations: {\n [Annotation.Label]: label,\n [Annotation.DiscreteValues]: stringifyJson([1]),\n } satisfies Annotation,\n },\n data,\n };\n}\n"],"names":["uniquePlId","isPTableAbsent","ValueType","PColumnName","Annotation","stringifyJson"],"mappings":";;;;SA8CgB,wBAAwB,CAAC,EACvC,SAAS,EACT,QAAQ,GAAGA,wBAAU,EAAyB,EAC9C,KAAK,GAAG,kBAAkB,EAC1B,MAAM,GAMP,EAAA;AACC,IAAA,IAAI,CAAC,SAAS,EAAE,QAAQ,CAAC,MAAM,EAAE;QAC/B;IACF;AACA,IAAA,MAAM,IAAI,GAAkB,SAAS,CAAC;SACnC,MAAM,CAAC,CAAC,CAAC,KAAsB,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAACC,4BAAc,CAAC,CAAC,CAAC,CAAC;AACjE,SAAA,GAAG,CAAC,CAAC,CAAC,MAAM,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC;AACnC,IAAA,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;QAChB;IACF;IACA,OAAO;AACL,QAAA,EAAE,EAAE,QAAQ;AACZ,QAAA,IAAI,EAAE;AACJ,YAAA,IAAI,EAAE,SAAS;YACf,SAAS,EAAEC,uBAAS,CAAC,GAAG;AACxB,YAAA,IAAI,EAAEC,yBAAW,CAAC,KAAK,CAAC,YAAY;YACpC,QAAQ,EAAE,SAAS,CAAC,QAAQ;AAC5B,YAAA,IAAI,MAAM,IAAI,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,MAAM,IAAI,EAAE,MAAM,EAAE,CAAC;AACvD,YAAA,WAAW,EAAE;AACX,gBAAA,CAACC,wBAAU,CAAC,KAAK,GAAG,KAAK;gBACzB,CAACA,wBAAU,CAAC,cAAc,GAAGC,2BAAa,CAAC,CAAC,CAAC,CAAC,CAAC;AAC3B,aAAA;AACvB,SAAA;QACD,IAAI;KACL;AACH;;;;"}
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@@ -5,13 +5,14 @@ export interface PlMultiSequenceAlignmentSettings {
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sequenceColumnIds?: PObjectId[];
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labelColumnIds?: PTableColumnId[];
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colorScheme: PlMultiSequenceAlignmentColorSchemeOption;
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widgets:
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widgets: PlMultiSequenceAlignmentWidget[];
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alignmentParams: {
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gpo: number;
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gpe: number;
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tgpe: number;
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};
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}
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export type PlMultiSequenceAlignmentWidget = 'consensus' | 'seqLogo' | 'tree' | 'legend';
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export interface PlMultiSequenceAlignmentModel extends Partial<PlMultiSequenceAlignmentSettings> {
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version?: number;
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}
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type: 'chemical-properties';
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} | {
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type: 'markup';
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columnIds: PObjectId[];
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};
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export declare function createRowSelectionColumn({ selection, columnId, label, domain, }: {
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selection: PlSelectionModel | undefined;
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{"version":3,"file":"PlMultiSequenceAlignment.d.ts","sourceRoot":"","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"names":[],"mappings":"AAAA,OAAO,EAGL,KAAK,OAAO,EACZ,KAAK,gBAAgB,EAGrB,KAAK,aAAa,EAClB,KAAK,SAAS,EACd,KAAK,cAAc,EAIpB,MAAM,iCAAiC,CAAC;AACzC,OAAO,EAAE,KAAK,gBAAgB,EAAE,MAAM,oBAAoB,CAAC;AAE3D,MAAM,MAAM,gBAAgB,GAAG,CAAC,MAAM,EAAE,gBAAgB,KAAK,OAAO,CAAC;AAErE,MAAM,WAAW,gCAAgC;IAC/C,iBAAiB,CAAC,EAAE,SAAS,EAAE,CAAC;IAChC,cAAc,CAAC,EAAE,cAAc,EAAE,CAAC;IAClC,WAAW,EAAE,yCAAyC,CAAC;IACvD,OAAO,EAAE,
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{"version":3,"file":"PlMultiSequenceAlignment.d.ts","sourceRoot":"","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"names":[],"mappings":"AAAA,OAAO,EAGL,KAAK,OAAO,EACZ,KAAK,gBAAgB,EAGrB,KAAK,aAAa,EAClB,KAAK,SAAS,EACd,KAAK,cAAc,EAIpB,MAAM,iCAAiC,CAAC;AACzC,OAAO,EAAE,KAAK,gBAAgB,EAAE,MAAM,oBAAoB,CAAC;AAE3D,MAAM,MAAM,gBAAgB,GAAG,CAAC,MAAM,EAAE,gBAAgB,KAAK,OAAO,CAAC;AAErE,MAAM,WAAW,gCAAgC;IAC/C,iBAAiB,CAAC,EAAE,SAAS,EAAE,CAAC;IAChC,cAAc,CAAC,EAAE,cAAc,EAAE,CAAC;IAClC,WAAW,EAAE,yCAAyC,CAAC;IACvD,OAAO,EAAE,8BAA8B,EAAE,CAAC;IAC1C,eAAe,EAAE;QACf,GAAG,EAAE,MAAM,CAAC;QACZ,GAAG,EAAE,MAAM,CAAC;QACZ,IAAI,EAAE,MAAM,CAAC;KACd,CAAC;CACH;AAED,MAAM,MAAM,8BAA8B,GACtC,WAAW,GACX,SAAS,GACT,MAAM,GACN,QAAQ,CAAC;AAEb,MAAM,WAAW,6BACf,SAAQ,OAAO,CAAC,gCAAgC,CAAC;IACjD,OAAO,CAAC,EAAE,MAAM,CAAC;CAClB;AAED,MAAM,MAAM,yCAAyC,GACjD;IAAE,IAAI,EAAE,UAAU,CAAA;CAAE,GACpB;IAAE,IAAI,EAAE,qBAAqB,CAAA;CAAE,GAC/B;IAAE,IAAI,EAAE,QAAQ,CAAC;IAAC,SAAS,EAAE,SAAS,EAAE,CAAA;CAAE,CAAC;AAE/C,wBAAgB,wBAAwB,CAAC,EACvC,SAAS,EACT,QAA8C,EAC9C,KAA0B,EAC1B,MAAM,GACP,EAAE;IACD,SAAS,EAAE,gBAAgB,GAAG,SAAS,CAAC;IACxC,QAAQ,CAAC,EAAE,SAAS,CAAC;IACrB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,MAAM,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;CACjC,GAAG,OAAO,CAAC,aAAa,CAAC,GAAG,SAAS,CAyBrC"}
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{"version":3,"file":"PlMultiSequenceAlignment.js","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"sourcesContent":["import {\n Annotation,\n isPTableAbsent,\n type PColumn,\n type PColumnIdAndSpec,\n type PColumnKey,\n PColumnName,\n type PColumnValues,\n type PObjectId,\n type PTableColumnId,\n stringifyJson,\n uniquePlId,\n ValueType,\n} from '@milaboratories/pl-model-common';\nimport { type PlSelectionModel } from './PlSelectionModel';\n\nexport type PColumnPredicate = (column: PColumnIdAndSpec) => boolean;\n\nexport interface PlMultiSequenceAlignmentSettings {\n sequenceColumnIds?: PObjectId[];\n labelColumnIds?: PTableColumnId[];\n colorScheme: PlMultiSequenceAlignmentColorSchemeOption;\n widgets:
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{"version":3,"file":"PlMultiSequenceAlignment.js","sources":["../../src/components/PlMultiSequenceAlignment.ts"],"sourcesContent":["import {\n Annotation,\n isPTableAbsent,\n type PColumn,\n type PColumnIdAndSpec,\n type PColumnKey,\n PColumnName,\n type PColumnValues,\n type PObjectId,\n type PTableColumnId,\n stringifyJson,\n uniquePlId,\n ValueType,\n} from '@milaboratories/pl-model-common';\nimport { type PlSelectionModel } from './PlSelectionModel';\n\nexport type PColumnPredicate = (column: PColumnIdAndSpec) => boolean;\n\nexport interface PlMultiSequenceAlignmentSettings {\n sequenceColumnIds?: PObjectId[];\n labelColumnIds?: PTableColumnId[];\n colorScheme: PlMultiSequenceAlignmentColorSchemeOption;\n widgets: PlMultiSequenceAlignmentWidget[];\n alignmentParams: {\n gpo: number;\n gpe: number;\n tgpe: number;\n };\n}\n\nexport type PlMultiSequenceAlignmentWidget =\n | 'consensus'\n | 'seqLogo'\n | 'tree'\n | 'legend';\n\nexport interface PlMultiSequenceAlignmentModel\n extends Partial<PlMultiSequenceAlignmentSettings> {\n version?: number;\n}\n\nexport type PlMultiSequenceAlignmentColorSchemeOption =\n | { type: 'no-color' }\n | { type: 'chemical-properties' }\n | { type: 'markup'; columnIds: PObjectId[] };\n\nexport function createRowSelectionColumn({\n selection,\n columnId = uniquePlId() as string as PObjectId,\n label = 'Selection marker',\n domain,\n}: {\n selection: PlSelectionModel | undefined;\n columnId?: PObjectId;\n label?: string;\n domain?: Record<string, string>;\n}): PColumn<PColumnValues> | undefined {\n if (!selection?.axesSpec.length) {\n return;\n }\n const data: PColumnValues = selection.selectedKeys\n .filter((r): r is PColumnKey => r.every((v) => !isPTableAbsent(v)))\n .map((r) => ({ key: r, val: 1 }));\n if (!data.length) {\n return;\n }\n return {\n id: columnId,\n spec: {\n kind: 'PColumn',\n valueType: ValueType.Int,\n name: PColumnName.Table.RowSelection,\n axesSpec: selection.axesSpec,\n ...(domain && Object.keys(domain).length && { domain }),\n annotations: {\n [Annotation.Label]: label,\n [Annotation.DiscreteValues]: stringifyJson([1]),\n } satisfies Annotation,\n },\n data,\n };\n}\n"],"names":[],"mappings":";;SA8CgB,wBAAwB,CAAC,EACvC,SAAS,EACT,QAAQ,GAAG,UAAU,EAAyB,EAC9C,KAAK,GAAG,kBAAkB,EAC1B,MAAM,GAMP,EAAA;AACC,IAAA,IAAI,CAAC,SAAS,EAAE,QAAQ,CAAC,MAAM,EAAE;QAC/B;IACF;AACA,IAAA,MAAM,IAAI,GAAkB,SAAS,CAAC;SACnC,MAAM,CAAC,CAAC,CAAC,KAAsB,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,cAAc,CAAC,CAAC,CAAC,CAAC;AACjE,SAAA,GAAG,CAAC,CAAC,CAAC,MAAM,EAAE,GAAG,EAAE,CAAC,EAAE,GAAG,EAAE,CAAC,EAAE,CAAC,CAAC;AACnC,IAAA,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;QAChB;IACF;IACA,OAAO;AACL,QAAA,EAAE,EAAE,QAAQ;AACZ,QAAA,IAAI,EAAE;AACJ,YAAA,IAAI,EAAE,SAAS;YACf,SAAS,EAAE,SAAS,CAAC,GAAG;AACxB,YAAA,IAAI,EAAE,WAAW,CAAC,KAAK,CAAC,YAAY;YACpC,QAAQ,EAAE,SAAS,CAAC,QAAQ;AAC5B,YAAA,IAAI,MAAM,IAAI,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,CAAC,MAAM,IAAI,EAAE,MAAM,EAAE,CAAC;AACvD,YAAA,WAAW,EAAE;AACX,gBAAA,CAAC,UAAU,CAAC,KAAK,GAAG,KAAK;gBACzB,CAAC,UAAU,CAAC,cAAc,GAAG,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC;AAC3B,aAAA;AACvB,SAAA;QACD,IAAI;KACL;AACH;;;;"}
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package/dist/package.json.cjs
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package/dist/package.json.js
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package/package.json
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{
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"name": "@platforma-sdk/model",
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"version": "1.
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"version": "1.43.0",
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"description": "Platforma.bio SDK / Block Model",
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"types": "./dist/index.d.ts",
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"main": "./dist/index.cjs",
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"utility-types": "^3.11.0",
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"canonicalize": "~2.1.0",
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"zod": "~3.23.8",
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"@milaboratories/pl-
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"@milaboratories/pl-
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"@milaboratories/pl-model-common": "1.19.18",
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"@milaboratories/pl-error-like": "1.12.5"
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},
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"devDependencies": {
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"typescript": "~5.6.3",
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"vitest": "^2.1.9",
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"fast-json-patch": "^3.1.1",
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"@milaboratories/helpers": "1.8.0",
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"@milaboratories/ts-configs": "1.0.6",
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"@milaboratories/build-configs": "1.0.8",
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"@milaboratories/helpers": "1.7.0",
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"@milaboratories/ts-builder": "1.0.5",
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"@milaboratories/ts-configs": "1.0.6",
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"@platforma-sdk/eslint-config": "1.1.0"
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},
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"scripts": {
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sequenceColumnIds?: PObjectId[];
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colorScheme: PlMultiSequenceAlignmentColorSchemeOption;
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widgets:
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widgets: PlMultiSequenceAlignmentWidget[];
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alignmentParams: {
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export type PlMultiSequenceAlignmentWidget =
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export interface PlMultiSequenceAlignmentModel
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extends Partial<PlMultiSequenceAlignmentSettings> {
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export type PlMultiSequenceAlignmentColorSchemeOption =
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| { type: 'markup';
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export function createRowSelectionColumn({
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selection,
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