@platforma-open/milaboratories.vj-usage.model 2.1.2 → 2.1.4

package/.turbo/turbo-build.log

@@ -1,6 +1,6 @@
  WARN  Issue while reading "/home/runner/work/vj-gene-usage/vj-gene-usage/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
 
-> @platforma-open/milaboratories.vj-usage.model@2.1.2 build /home/runner/work/vj-gene-usage/vj-gene-usage/model
+> @platforma-open/milaboratories.vj-usage.model@2.1.4 build /home/runner/work/vj-gene-usage/vj-gene-usage/model
 > tsup && vite build && block-tools build-model
 
 CLI Building entry: src/index.ts
@@ -11,21 +11,21 @@
 CLI Cleaning output folder
 CJS Build start
 ESM Build start
-CJS dist/index.cjs     2.19 KB
-CJS dist/index.cjs.map 5.06 KB
-CJS ⚡️ Build success in 127ms
 ESM dist/index.js     2.18 KB
 ESM dist/index.js.map 5.02 KB
-ESM ⚡️ Build success in 127ms
+ESM ⚡️ Build success in 123ms
+CJS dist/index.cjs     2.19 KB
+CJS dist/index.cjs.map 5.06 KB
+CJS ⚡️ Build success in 123ms
 DTS Build start
-DTS ⚡️ Build success in 2368ms
+DTS ⚡️ Build success in 2451ms
 DTS dist/index.d.cts 1.92 KB
 DTS dist/index.d.ts  1.92 KB
 vite v6.2.6 building for production...
 transforming...
-✓ 69 modules transformed.
+✓ 77 modules transformed.
 rendering chunks...
 computing gzip size...
-dist/bundle.js  229.07 kB │ gzip: 43.40 kB │ map: 501.24 kB
-dist/bundle.js  243.54 kB │ gzip: 44.11 kB │ map: 502.89 kB
-✓ built in 939ms
+dist/bundle.js  232.86 kB │ gzip: 43.87 kB │ map: 508.33 kB
+dist/bundle.js  247.49 kB │ gzip: 44.55 kB │ map: 509.99 kB
+✓ built in 881ms

package/CHANGELOG.md

@@ -1,5 +1,20 @@
 # @platforma-open/milaboratories.vj-usage.model
 
+## 2.1.4
+
+### Patch Changes
+
+- 81536ef: technical release
+
+## 2.1.3
+
+### Patch Changes
+
+- 9a745e8: technical release
+- 83edfdf: technical release
+- 59cda2d: technical release
+- 3385764: technical release
+
 ## 2.1.2
 
 ### Patch Changes

package/dist/bundle.js

@@ -3964,6 +3964,10 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
     quotelessJson,
     ZodError
   });
+  z.object({
+    type: z.literal("plain"),
+    content: z.string()
+  });
   z.object({
     /** Included left border. */
     from: z.number().min(0),
@@ -4254,14 +4258,27 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
   const Annotation = {
     DiscreteValues: "pl7.app/discreteValues",
     Graph: {
-      IsVirtual: "pl7.app/graph/isVirtual"
+      Axis: {
+        HighCardinality: "pl7.app/graph/axis/highCardinality",
+        LowerLimit: "pl7.app/graph/axis/lowerLimit",
+        SymmetricRange: "pl7.app/graph/axis/symmetricRange",
+        UpperLimit: "pl7.app/graph/axis/upperLimit"
+      },
+      IsDenseAxis: "pl7.app/graph/isDenseAxis",
+      IsVirtual: "pl7.app/graph/isVirtual",
+      Palette: "pl7.app/graph/palette",
+      Thresholds: "pl7.app/graph/thresholds",
+      TreatAbsentValuesAs: "pl7.app/graph/treatAbsentValuesAs"
     },
     HideDataFromUi: "pl7.app/hideDataFromUi",
     HideDataFromGraphs: "pl7.app/hideDataFromGraphs",
+    IsDiscreteFilter: "pl7.app/isDiscreteFilter",
     IsLinkerColumn: "pl7.app/isLinkerColumn",
+    IsSubset: "pl7.app/isSubset",
     Label: "pl7.app/label",
     Max: "pl7.app/max",
     Min: "pl7.app/min",
+    MultipliesBy: "pl7.app/multipliesBy",
     Parents: "pl7.app/parents",
     Sequence: {
       Annotation: {
@@ -4274,14 +4291,29 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
     },
     Trace: "pl7.app/trace"
   };
+  const ValueTypeSchema = z.enum(["Int", "Long", "Float", "Double", "String"]);
   const AnnotationJson = {
     [Annotation.DiscreteValues]: z.array(z.string()).or(z.array(z.number())),
+    [Annotation.Graph.Axis.HighCardinality]: z.boolean(),
+    [Annotation.Graph.Axis.LowerLimit]: z.number(),
+    [Annotation.Graph.Axis.UpperLimit]: z.number(),
+    [Annotation.Graph.Axis.SymmetricRange]: z.boolean(),
+    [Annotation.Graph.IsDenseAxis]: z.boolean(),
+    [Annotation.Graph.Palette]: z.object({ mapping: z.record(z.number()), name: z.string() }),
+    [Annotation.Graph.Thresholds]: z.array(z.object({
+      columnId: z.object({ valueType: ValueTypeSchema, name: z.string() }),
+      value: z.number()
+    })),
+    [Annotation.Graph.TreatAbsentValuesAs]: z.number(),
     [Annotation.Graph.IsVirtual]: z.boolean(),
     [Annotation.HideDataFromUi]: z.boolean(),
     [Annotation.HideDataFromGraphs]: z.boolean(),
+    [Annotation.IsDiscreteFilter]: z.boolean(),
     [Annotation.IsLinkerColumn]: z.boolean(),
+    [Annotation.IsSubset]: z.boolean(),
     [Annotation.Max]: z.number(),
     [Annotation.Min]: z.number(),
+    [Annotation.MultipliesBy]: z.array(z.string()),
     [Annotation.Parents]: z.array(z.string()),
     [Annotation.Sequence.Annotation.Mapping]: z.record(z.string(), z.string()),
     [Annotation.Sequence.IsAnnotation]: z.boolean(),
@@ -5285,6 +5317,80 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
   }
   const StagingAccessorName = "staging";
   const MainAccessorName = "main";
+  function filterDataInfoEntries(dataInfoEntries, axisFilters) {
+    const sortedFilters = [...axisFilters].sort((a, b) => b[0] - a[0]);
+    const { type } = dataInfoEntries;
+    switch (type) {
+      case "Json": {
+        const { keyLength } = dataInfoEntries;
+        for (const [axisIdx] of axisFilters)
+          if (axisIdx >= keyLength)
+            throw new Error(`Can't filter on non-data axis ${axisIdx}. Must be >= ${keyLength}`);
+        break;
+      }
+      case "JsonPartitioned":
+      case "BinaryPartitioned":
+      case "ParquetPartitioned": {
+        const { partitionKeyLength } = dataInfoEntries;
+        for (const [axisIdx] of axisFilters)
+          if (axisIdx >= partitionKeyLength)
+            throw new Error(`Can't filter on non-partitioned axis ${axisIdx}. Must be >= ${partitionKeyLength}`);
+        break;
+      }
+      default:
+        throw new Error(`Unsupported data info type: ${type}`);
+    }
+    const keyMatchesFilters = (key) => {
+      for (const [axisIdx, axisValue] of sortedFilters)
+        if (key[axisIdx] !== axisValue)
+          return false;
+      return true;
+    };
+    const removeFilteredAxes = (key) => {
+      const newKey = [...key];
+      for (const [axisIdx] of sortedFilters)
+        newKey.splice(axisIdx, 1);
+      return newKey;
+    };
+    switch (dataInfoEntries.type) {
+      case "Json":
+        return {
+          type: "Json",
+          keyLength: dataInfoEntries.keyLength - axisFilters.length,
+          data: dataInfoEntries.data.filter((entry) => keyMatchesFilters(entry.key)).map((entry) => ({
+            key: removeFilteredAxes(entry.key),
+            value: entry.value
+          }))
+        };
+      case "JsonPartitioned":
+        return {
+          type: "JsonPartitioned",
+          partitionKeyLength: dataInfoEntries.partitionKeyLength - axisFilters.length,
+          parts: dataInfoEntries.parts.filter((entry) => keyMatchesFilters(entry.key)).map((entry) => ({
+            key: removeFilteredAxes(entry.key),
+            value: entry.value
+          }))
+        };
+      case "BinaryPartitioned":
+        return {
+          type: "BinaryPartitioned",
+          partitionKeyLength: dataInfoEntries.partitionKeyLength - axisFilters.length,
+          parts: dataInfoEntries.parts.filter((entry) => keyMatchesFilters(entry.key)).map((entry) => ({
+            key: removeFilteredAxes(entry.key),
+            value: entry.value
+          }))
+        };
+      case "ParquetPartitioned":
+        return {
+          type: "ParquetPartitioned",
+          partitionKeyLength: dataInfoEntries.partitionKeyLength - axisFilters.length,
+          parts: dataInfoEntries.parts.filter((entry) => keyMatchesFilters(entry.key)).map((entry) => ({
+            key: removeFilteredAxes(entry.key),
+            value: entry.value
+          }))
+        };
+    }
+  }
   const TraceEntry = z.object({
     type: z.string(),
     importance: z.number().optional(),
@@ -5410,9 +5516,11 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
   const RT_RESOURCE_MAP_PARTITIONED = PCD_PREFIX + "Partitioned/ResourceMap";
   const RT_JSON_PARTITIONED = PCD_PREFIX + "JsonPartitioned";
   const RT_BINARY_PARTITIONED = PCD_PREFIX + "BinaryPartitioned";
+  const RT_PARQUET_PARTITIONED = PCD_PREFIX + "ParquetPartitioned";
   const PCD_SUP_PREFIX = PCD_PREFIX + "Partitioned/";
   const RT_JSON_SUPER_PARTITIONED = PCD_SUP_PREFIX + "JsonPartitioned";
   const RT_BINARY_SUPER_PARTITIONED = PCD_SUP_PREFIX + "BinaryPartitioned";
+  const RT_PARQUET_SUPER_PARTITIONED = PCD_SUP_PREFIX + "ParquetPartitioned";
   const removeIndexSuffix = (keyStr) => {
     if (keyStr.endsWith(".index")) {
       return { baseKey: keyStr.substring(0, keyStr.length - 6), type: "index" };
@@ -5438,10 +5546,12 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
         break;
       case RT_JSON_PARTITIONED:
       case RT_BINARY_PARTITIONED:
+      case RT_PARQUET_PARTITIONED:
         keyLength = meta["partitionKeyLength"];
         break;
       case RT_BINARY_SUPER_PARTITIONED:
       case RT_JSON_SUPER_PARTITIONED:
+      case RT_PARQUET_SUPER_PARTITIONED:
         keyLength = meta["superPartitionKeyLength"] + meta["partitionKeyLength"];
         break;
     }
@@ -5449,6 +5559,7 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
       case RT_RESOURCE_MAP:
       case RT_JSON_PARTITIONED:
       case RT_BINARY_PARTITIONED:
+      case RT_PARQUET_PARTITIONED:
         for (let keyStr of acc.listInputFields()) {
           if (rt === RT_BINARY_PARTITIONED) {
             keyStr = removeIndexSuffix(keyStr).baseKey;
@@ -5460,6 +5571,7 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
       case RT_RESOURCE_MAP_PARTITIONED:
       case RT_BINARY_SUPER_PARTITIONED:
       case RT_JSON_SUPER_PARTITIONED:
+      case RT_PARQUET_SUPER_PARTITIONED:
         for (const supKeyStr of acc.listInputFields()) {
           const keyPrefix = [...JSON.parse(supKeyStr)];
           const value = acc.resolve({ field: supKeyStr, assertFieldType: "Input" });
@@ -5478,7 +5590,7 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
     return { data, keyLength };
   }
   function getUniquePartitionKeysForDataEntries(list) {
-    if (list.type !== "JsonPartitioned" && list.type !== "BinaryPartitioned")
+    if (list.type !== "JsonPartitioned" && list.type !== "BinaryPartitioned" && list.type !== "ParquetPartitioned")
       throw new Error(`Splitting requires Partitioned DataInfoEntries, got ${list.type}`);
     const { parts, partitionKeyLength } = list;
     const result = [];
@@ -5526,7 +5638,7 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
       return void 0;
     const resourceType = acc.resourceType.name;
     const meta = acc.getDataAsJson();
-    if (keyPrefix.length > 0 && (resourceType === RT_JSON_SUPER_PARTITIONED || resourceType === RT_BINARY_SUPER_PARTITIONED)) {
+    if (keyPrefix.length > 0 && (resourceType === RT_JSON_SUPER_PARTITIONED || resourceType === RT_BINARY_SUPER_PARTITIONED || resourceType === RT_PARQUET_SUPER_PARTITIONED)) {
       throw new Error(`Unexpected nested super-partitioned resource: ${resourceType}`);
     }
     switch (resourceType) {
@@ -5591,6 +5703,24 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
           parts
         };
       }
+      case RT_PARQUET_PARTITIONED: {
+        if (typeof (meta == null ? void 0 : meta.partitionKeyLength) !== "number") {
+          throw new Error(`Missing partitionKeyLength in metadata for ${resourceType}`);
+        }
+        const parts = [];
+        for (const keyStr of acc.listInputFields()) {
+          const value = acc.resolve({ field: keyStr, assertFieldType: "Input" });
+          if (value === void 0)
+            return void 0;
+          const key = [...keyPrefix, ...JSON.parse(keyStr)];
+          parts.push({ key, value });
+        }
+        return {
+          type: "ParquetPartitioned",
+          partitionKeyLength: meta.partitionKeyLength,
+          parts
+        };
+      }
       case RT_JSON_SUPER_PARTITIONED: {
         if (typeof (meta == null ? void 0 : meta.superPartitionKeyLength) !== "number" || typeof (meta == null ? void 0 : meta.partitionKeyLength) !== "number") {
           throw new Error(`Missing superPartitionKeyLength or partitionKeyLength in metadata for ${resourceType}`);
@@ -5643,6 +5773,32 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
           parts
         };
       }
+      case RT_PARQUET_SUPER_PARTITIONED: {
+        if (typeof (meta == null ? void 0 : meta.superPartitionKeyLength) !== "number" || typeof (meta == null ? void 0 : meta.partitionKeyLength) !== "number") {
+          throw new Error(`Missing superPartitionKeyLength or partitionKeyLength in metadata for ${resourceType}`);
+        }
+        const totalKeyLength = meta.superPartitionKeyLength + meta.partitionKeyLength;
+        const parts = [];
+        for (const supKeyStr of acc.listInputFields()) {
+          const superPartition = acc.resolve({ field: supKeyStr, assertFieldType: "Input" });
+          if (superPartition === void 0)
+            return void 0;
+          if (superPartition.resourceType.name !== RT_PARQUET_PARTITIONED) {
+            throw new Error(`Expected ${RT_PARQUET_PARTITIONED} inside ${resourceType}, but got ${superPartition.resourceType.name}`);
+          }
+          const innerResult = parsePColumnData(superPartition, JSON.parse(supKeyStr));
+          if (innerResult === void 0)
+            return void 0;
+          if (innerResult.type !== "ParquetPartitioned")
+            throw new Error(`Unexpected inner result type for ${resourceType}: ${innerResult.type}`);
+          parts.push(...innerResult.parts);
+        }
+        return {
+          type: "ParquetPartitioned",
+          partitionKeyLength: totalKeyLength,
+          parts
+        };
+      }
       default:
         throw new Error(`Unknown resource type: ${resourceType}`);
     }
@@ -5658,80 +5814,6 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
       return parsePColumnData(acc);
     throw new Error(`Unexpected input type: ${typeof acc}`);
   }
-  function filterDataInfoEntries(dataInfoEntries, axisFilters) {
-    const sortedFilters = [...axisFilters].sort((a, b) => b[0] - a[0]);
-    const { type } = dataInfoEntries;
-    switch (type) {
-      case "Json": {
-        const { keyLength } = dataInfoEntries;
-        for (const [axisIdx] of axisFilters)
-          if (axisIdx >= keyLength)
-            throw new Error(`Can't filter on non-data axis ${axisIdx}. Must be >= ${keyLength}`);
-        break;
-      }
-      case "JsonPartitioned":
-      case "BinaryPartitioned":
-      case "ParquetPartitioned": {
-        const { partitionKeyLength } = dataInfoEntries;
-        for (const [axisIdx] of axisFilters)
-          if (axisIdx >= partitionKeyLength)
-            throw new Error(`Can't filter on non-partitioned axis ${axisIdx}. Must be >= ${partitionKeyLength}`);
-        break;
-      }
-      default:
-        throw new Error(`Unsupported data info type: ${type}`);
-    }
-    const keyMatchesFilters = (key) => {
-      for (const [axisIdx, axisValue] of sortedFilters)
-        if (key[axisIdx] !== axisValue)
-          return false;
-      return true;
-    };
-    const removeFilteredAxes = (key) => {
-      const newKey = [...key];
-      for (const [axisIdx] of sortedFilters)
-        newKey.splice(axisIdx, 1);
-      return newKey;
-    };
-    switch (dataInfoEntries.type) {
-      case "Json":
-        return {
-          type: "Json",
-          keyLength: dataInfoEntries.keyLength - axisFilters.length,
-          data: dataInfoEntries.data.filter((entry) => keyMatchesFilters(entry.key)).map((entry) => ({
-            key: removeFilteredAxes(entry.key),
-            value: entry.value
-          }))
-        };
-      case "JsonPartitioned":
-        return {
-          type: "JsonPartitioned",
-          partitionKeyLength: dataInfoEntries.partitionKeyLength - axisFilters.length,
-          parts: dataInfoEntries.parts.filter((entry) => keyMatchesFilters(entry.key)).map((entry) => ({
-            key: removeFilteredAxes(entry.key),
-            value: entry.value
-          }))
-        };
-      case "BinaryPartitioned":
-        return {
-          type: "BinaryPartitioned",
-          partitionKeyLength: dataInfoEntries.partitionKeyLength - axisFilters.length,
-          parts: dataInfoEntries.parts.filter((entry) => keyMatchesFilters(entry.key)).map((entry) => ({
-            key: removeFilteredAxes(entry.key),
-            value: entry.value
-          }))
-        };
-      case "ParquetPartitioned":
-        return {
-          type: "ParquetPartitioned",
-          partitionKeyLength: dataInfoEntries.partitionKeyLength - axisFilters.length,
-          parts: dataInfoEntries.parts.filter((entry) => keyMatchesFilters(entry.key)).map((entry) => ({
-            key: removeFilteredAxes(entry.key),
-            value: entry.value
-          }))
-        };
-    }
-  }
   function isPColumnValues(value) {
     if (!Array.isArray(value))
       return false;
@@ -6519,7 +6601,7 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
       this.ctx.logError(msg);
     }
   }
-  var version = "1.43.2";
+  var version = "1.45.0";
   const PlatformaSDKVersion = version;
   function isConfigLambda(cfgOrFh) {
     return cfgOrFh.__renderLambda === true;
@@ -6822,7 +6904,7 @@ var __publicField = (obj, key, value) => __defNormalProp(obj, typeof key !== "sy
     if (!blockColumns) {
       const columns2 = new PColumnCollection();
       columns2.addColumnProvider(ctx.resultPool);
-      const allColumns = columns2.getColumns(() => true, { dontWaitAllData: true, overrideLabelAnnotation: false }) ?? [];
+      const allColumns = columns2.getColumns((spec) => !isHiddenFromGraphColumn(spec), { dontWaitAllData: true, overrideLabelAnnotation: false }) ?? [];
       if (!allColumnsReady(allColumns)) {
         return void 0;
       }