@platforma-open/milaboratories.top-antibodies 4.3.3 → 4.3.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/block-pack/main.plj.gz +0 -0
- package/block-pack/manifest.json +1 -1
- package/block-pack/model.json +1 -1
- package/block-pack/published.json +1 -1
- package/block-pack/ui.tgz +0 -0
- package/dist/AGENTS.d.ts +912 -6262
- package/dist/AGENTS.d.ts.map +1 -1
- package/dist/index.d.ts +920 -6272
- package/dist/index.d.ts.map +1 -1
- package/dist/index.js +104 -104
- package/dist/index.js.map +1 -1
- package/dist/rolldown-runtime-B-1-B7_t.js +33 -0
- package/package.json +7 -7
package/dist/index.js
CHANGED
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@@ -1,34 +1,12 @@
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var __defProp = Object.defineProperty;
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var __getOwnPropDesc = Object.getOwnPropertyDescriptor;
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var __getOwnPropNames = Object.getOwnPropertyNames;
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var __getProtoOf = Object.getPrototypeOf;
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var __hasOwnProp = Object.prototype.hasOwnProperty;
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var __commonJSMin = (cb, mod) => () => (mod || (cb((mod = { exports: {} }).exports, mod), cb = null), mod.exports);
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var __copyProps = (to, from, except, desc) => {
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key = keys[i];
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if (!__hasOwnProp.call(to, key) && key !== except) __defProp(to, key, {
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get: ((k) => from[k]).bind(null, key),
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enumerable: !(desc = __getOwnPropDesc(from, key)) || desc.enumerable
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}
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return to;
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};
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var __toESM = (mod, isNodeMode, target) => (target = mod != null ? __create(__getProtoOf(mod)) : {}, __copyProps(isNodeMode || !mod || !mod.__esModule ? __defProp(target, "default", {
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}) : target, mod));
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//#endregion
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.82.0/node_modules/@platforma-sdk/model/dist/plugin_handle.js
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import { r as __toESM, t as __commonJSMin } from "./rolldown-runtime-B-1-B7_t.js";
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/plugin_handle.js
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const PLUGIN_OUTPUT_PREFIX = "plugin-output#";
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/** Construct the output key for a plugin output in the block outputs map. */
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function pluginOutputKey(handle, outputKey) {
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return `${PLUGIN_OUTPUT_PREFIX}${handle}#${outputKey}`;
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}
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//#endregion
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/block_storage.js
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* Discriminator key for BlockStorage format detection.
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/block_migrations.js
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/** Create a DataVersioned wrapper with correct shape */
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function makeVersionedData(version, data) {
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return {
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};
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//#endregion
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/internal.js
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/** Utility code helping to identify whether the code is running in actual UI environment */
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function isInUI() {
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return typeof globalThis.getPlatforma !== "undefined" || typeof globalThis.platforma !== "undefined";
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//#endregion
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/block_storage_facade.js
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/**
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for (const key of Object.values(BlockStorageFacadeCallbacks)) tryRegisterCallback(key, callbacks[key]);
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}
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//#endregion
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/services/block_services.js
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/**
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* Services required by all V3 blocks by default.
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* Edit this when a new service should be available to all blocks.
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*
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* Standalone module to avoid circular dependencies between block_model.ts
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*/
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const BLOCK_SERVICE_FLAGS = {
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requiresPFrame: true,
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requiresColumnsCollection: true
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};
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resolveRequiredServices(BLOCK_SERVICE_FLAGS);
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//#endregion
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/render/future.js
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handle;
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//#endregion
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/render/accessor.js
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/render/internal.js
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const MainAccessorName = "main";
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/render/util/axis_filtering.js
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function filterDataInfoEntries(dataInfoEntries, axisFilters) {
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/labels/linked_column_postfix.js
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*
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//#endregion
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//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/labels/derive_distinct_labels.js
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*
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/** Create id for column copy with added keys in axes domains */
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return rawPool.map((b) => `${b.blockId}\x1f${b.prodCtx ?? ""}\x1f${b.stagingCtx ?? ""}\x1f${b.prodIncomplete ? 1 : 0}\x1f${b.stagingIncomplete ? 1 : 0}`).join("");
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|
|
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|
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|
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const ColumnRecipe = Object.assign(ColumnRecipeBuild, { getStatus: ColumnRecipeGetStatus });
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/**
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|
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@@ -11744,7 +11722,7 @@ function referencedUniIdsOf(key) {
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return /* @__PURE__ */ new Set([key.column, ...(key.path ?? []).map((item) => item.column)]);
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|
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|
|
@@ -11758,7 +11736,7 @@ function Column(source, opts) {
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|
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|
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* deduped in traversal order. The hit column is
|
|
@@ -11998,7 +11976,7 @@ function hasSingleDataColumn(recipe) {
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function getAllRelatedColumns(ctx, predicate) {
|
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columns.addColumnProvider(ctx.resultPool);
|
|
@@ -12074,7 +12052,7 @@ function discoverIntegrableColumnIds(ctx, rootColumns) {
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|
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|
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|
|
@@ -12103,7 +12081,7 @@ function createPFrameForGraphs(ctx, blockColumns) {
|
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|
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|
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|
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|
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|
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|
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|
|
@@ -12171,7 +12149,7 @@ function buildRefMap(entries) {
|
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|
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|
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|
|
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|
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|
|
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|
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|
|
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|
|
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|
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|
|
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|
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/** Adapt a {@link ColumnRecipe} to the plain {@link RuleColumn} shape. */
|
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|
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|
|
@@ -13219,7 +13197,7 @@ function deriveAllLabels(options) {
|
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/**
|
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|
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|
* outer-joined subtree: `getQuery()` encodes its linker chain, and its
|
|
@@ -13283,8 +13261,8 @@ function columnToJoinEntry(col, qualifications) {
|
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function createColumnResolver(columns
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|
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function createColumnResolver(columns) {
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|
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|
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const byFullId = /* @__PURE__ */ new Map();
|
|
@@ -13292,9 +13270,7 @@ function createColumnResolver(columns, deps) {
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|
|
13293
13271
|
byFullId.set(c.id, c);
|
|
13294
13272
|
const pid = extractPObjectId(c.id);
|
|
13295
|
-
|
|
13296
|
-
if (existing === void 0) byPObjectId.set(pid, c);
|
|
13297
|
-
else if (existing.id !== c.id) deps?.warn?.(`Ambiguous PObjectId ${pid}: recipe ids ${existing.id} and ${c.id} both match — keeping first.`);
|
|
13273
|
+
if (!byPObjectId.has(pid)) byPObjectId.set(pid, c);
|
|
13298
13274
|
}
|
|
13299
13275
|
return (ref) => {
|
|
13300
13276
|
if (ref.type === "axis") return axisIds.some((a) => matchAxisId(ref.id, a)) ? ref : void 0;
|
|
@@ -13307,7 +13283,7 @@ function createColumnResolver(columns, deps) {
|
|
|
13307
13283
|
};
|
|
13308
13284
|
}
|
|
13309
13285
|
//#endregion
|
|
13310
|
-
//#region ../node_modules/.pnpm/@platforma-sdk+model@1.
|
|
13286
|
+
//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/components/PlDataTable/createPlDataTable/discoverColumns.js
|
|
13311
13287
|
/**
|
|
13312
13288
|
* Discover columns from sources/anchors and split them into primary
|
|
13313
13289
|
* (direct anchor hits — zero-hop, query is a bare column) and secondary
|
|
@@ -13353,7 +13329,7 @@ function discoverLabelColumns(ctx, primary) {
|
|
|
13353
13329
|
}).getColumns();
|
|
13354
13330
|
}
|
|
13355
13331
|
//#endregion
|
|
13356
|
-
//#region ../node_modules/.pnpm/@platforma-sdk+model@1.
|
|
13332
|
+
//#region ../node_modules/.pnpm/@platforma-sdk+model@1.83.9/node_modules/@platforma-sdk/model/dist/components/PlDataTable/createPlDataTable/createPlDataTableV3.js
|
|
13357
13333
|
function createPlDataTableV3(ctx, options) {
|
|
13358
13334
|
const state = upgradePlDataTableStateV2(options.tableState);
|
|
13359
13335
|
const primaryJoinType = options.primaryJoinType ?? "full";
|
|
@@ -13381,7 +13357,7 @@ function createPlDataTableV3(ctx, options) {
|
|
|
13381
13357
|
...primary,
|
|
13382
13358
|
...direct,
|
|
13383
13359
|
...linked.flatMap((lc) => [...collectLinkerColumns(lc), lc])
|
|
13384
|
-
]
|
|
13360
|
+
]);
|
|
13385
13361
|
const remapedDefaultFilters = remapFilterColumnIds(options.filters, resolver);
|
|
13386
13362
|
const filters = filterFilters(concatFilters(state.pTableParams.filters, state.pTableParams.defaultFilters ?? remapedDefaultFilters), resolver);
|
|
13387
13363
|
const sorting = filterSorting(resolveSorting(state.pTableParams.sorting, remapSortingColumnIds(options.sorting, resolver)), resolver);
|
|
@@ -13828,9 +13804,25 @@ function isDatasetScopingSubset(spec) {
|
|
|
13828
13804
|
*/
|
|
13829
13805
|
function isPresenceOnlyColumn(spec, anchorSpec) {
|
|
13830
13806
|
if (spec.annotations?.[Annotation.IsSubset] !== "true") return false;
|
|
13807
|
+
return isOnAnchorAxes(spec, anchorSpec);
|
|
13808
|
+
}
|
|
13809
|
+
/**
|
|
13810
|
+
* True when every axis of the column is one of the anchor's axes. Axis identity is name,
|
|
13811
|
+
* type, domain and context-domain.
|
|
13812
|
+
*
|
|
13813
|
+
* A column reached through a linker carries an axis the anchor does not have and reads
|
|
13814
|
+
* as not on the anchor's axes.
|
|
13815
|
+
*/
|
|
13816
|
+
function isOnAnchorAxes(spec, anchorSpec) {
|
|
13831
13817
|
const anchorAxes = new Set(anchorSpec.axesSpec.map(canonicalizeAxisId));
|
|
13832
13818
|
return spec.axesSpec.every((axis) => anchorAxes.has(canonicalizeAxisId(axis)));
|
|
13833
13819
|
}
|
|
13820
|
+
/** Traversal scope shared by every anchored discovery in the model: filter and ranking
|
|
13821
|
+
* options, defaults, the MSA frame and the results table. */
|
|
13822
|
+
const ANCHORED_DISCOVERY = {
|
|
13823
|
+
mode: "enrichment",
|
|
13824
|
+
maxHops: 4
|
|
13825
|
+
};
|
|
13834
13826
|
/** JS post-filter for the residual predicates that {@link discoveryExcludeSelectors}
|
|
13835
13827
|
* can't express host-side: File value type (`File` is not a matchable `ValueType`)
|
|
13836
13828
|
* and columns produced by a lead-selection block (last-trace-step check on parsed
|
|
@@ -13939,11 +13931,13 @@ function buildCollection(inputAnchor) {
|
|
|
13939
13931
|
const sampleAxisName = anchorSpec.axesSpec[0].name;
|
|
13940
13932
|
const allMatches = dedupByLeafId(collection.discover({
|
|
13941
13933
|
anchors: { main: anchorSpec },
|
|
13942
|
-
|
|
13943
|
-
maxHops: 2,
|
|
13934
|
+
...ANCHORED_DISCOVERY,
|
|
13944
13935
|
exclude: discoveryExcludeSelectors(sampleAxisName)
|
|
13945
13936
|
}).getColumns()).filter(isSelectableMatch);
|
|
13946
|
-
const scores = allMatches.filter((c) =>
|
|
13937
|
+
const scores = allMatches.filter((c) => {
|
|
13938
|
+
const spec = c.getSpec();
|
|
13939
|
+
return spec.annotations?.[Annotation.IsScore] === "true" && isOnAnchorAxes(spec, anchorSpec);
|
|
13940
|
+
});
|
|
13947
13941
|
const defaultFilters = computeDefaultFilters(scores, inputAnchor);
|
|
13948
13942
|
return {
|
|
13949
13943
|
collection,
|
|
@@ -14648,6 +14642,7 @@ const platforma$1 = BlockModelV3.create({
|
|
|
14648
14642
|
if (!result) return void 0;
|
|
14649
14643
|
const filterableMatches = dedupByLeafId(result.collection.discover({
|
|
14650
14644
|
anchors: { main: result.anchorSpec },
|
|
14645
|
+
...ANCHORED_DISCOVERY,
|
|
14651
14646
|
exclude: discoveryExcludeSelectors(result.sampleAxisName)
|
|
14652
14647
|
}).getColumns()).filter(isSelectableMatch);
|
|
14653
14648
|
const labels = deriveDistinctLabels(filterableMatches.map((c) => c.getSpec()), { includeNativeLabel: true });
|
|
@@ -14676,6 +14671,7 @@ const platforma$1 = BlockModelV3.create({
|
|
|
14676
14671
|
const rankedColumnIds = new Set(ctx.data.rankingOrder.flatMap((r) => r.value ? [r.value.column] : []));
|
|
14677
14672
|
const rankableMatches = dedupByLeafId(result.collection.discover({
|
|
14678
14673
|
anchors: { main: result.anchorSpec },
|
|
14674
|
+
...ANCHORED_DISCOVERY,
|
|
14679
14675
|
exclude: [...discoveryExcludeSelectors(result.sampleAxisName), { type: "String" }]
|
|
14680
14676
|
}).getColumns()).filter((c) => isRankableMatch(c, result.anchorSpec, rankedColumnIds));
|
|
14681
14677
|
const labels = deriveDistinctLabels(rankableMatches.map((c) => c.getSpec()), { includeNativeLabel: true });
|
|
@@ -14706,6 +14702,7 @@ const platforma$1 = BlockModelV3.create({
|
|
|
14706
14702
|
if (!anchorClonotypeAxisName) return void 0;
|
|
14707
14703
|
const msaIds = result.collection.discover({
|
|
14708
14704
|
anchors: { main: result.anchorSpec },
|
|
14705
|
+
...ANCHORED_DISCOVERY,
|
|
14709
14706
|
include: {
|
|
14710
14707
|
axes: [{ name: exactMatch(anchorClonotypeAxisName) }],
|
|
14711
14708
|
partialAxesMatch: true
|
|
@@ -14766,7 +14763,10 @@ const platforma$1 = BlockModelV3.create({
|
|
|
14766
14763
|
if (!leadSelectionCol) return void 0;
|
|
14767
14764
|
const leadSelectionSpec = leadSelectionCol.getSpec();
|
|
14768
14765
|
if (!leadSelectionSpec.axesSpec.some((axis) => JSON.stringify(axis) === JSON.stringify(anchorSpec.axesSpec[1]))) return void 0;
|
|
14769
|
-
const poolDiscovered = ColumnsCollection().discover({
|
|
14766
|
+
const poolDiscovered = ColumnsCollection().discover({
|
|
14767
|
+
anchors: { main: leadSelectionSpec },
|
|
14768
|
+
...ANCHORED_DISCOVERY
|
|
14769
|
+
}).getColumns().filter((c) => {
|
|
14770
14770
|
return !isProducedByLeadSelection(c.getSpec());
|
|
14771
14771
|
});
|
|
14772
14772
|
const primaryColumns = poolDiscovered.filter((c) => c.id === leadSelectionCol.id);
|