@platforma-open/milaboratories.sort-seq-analysis.block 1.0.4 → 1.0.6

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  # @platforma-open/milaboratories.sort-seq-analysis.block
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+ ## 1.0.6
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+
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+ ### Patch Changes
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+
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+ - 1958a6c: Re-enable the CI test phase and raise the SDK catalog to latest.
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+
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+ ## 1.0.5
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+
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+ ### Patch Changes
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+
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+ - 4945fef: Pool replicate samples instead of refusing the run
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+
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+ A condition-and-gate group holding more than one sample used to fail the run. Its reads are
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+ now summed, matching what `titeseq-analysis` and `clonotype-enrichment` already do.
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+
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+ The pooling is reported rather than silent, which is the objection the original refusal was
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+ raised against: the manifest gains a `pooledGroups` list, the run log names every merged
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+ group and its samples, and the Run statistics dialog shows a warning listing them. The dialog
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+ resolves sample ids to sample labels through the sample axis's label column, so the alert
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+ names samples the way the user does. Only retained conditions are reported — an excluded
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+ condition is not part of the run. Where replicates supplied different sort fractions, the
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+ non-null values are averaged and that is flagged separately.
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+
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+ Two things broke quietly on replicate samples and are fixed at the source, by pooling before
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+ anything reads the table: the read-distribution file emitted duplicate `(variantKey, gate)`
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+ keys, and the sort-fraction check counted a twice-collected gate's fraction twice and refused
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+ runs that were entirely valid.
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+
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+ This is temporary. It does not decide whether replicates should be pooled at all rather than
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+ scored separately, nor what to do when they disagree on the sort fraction.
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+
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  ## 1.0.4
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  ### Patch Changes
Binary file
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