@platforma-open/milaboratories.rarefaction.workflow 1.0.2 → 1.1.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.turbo/turbo-build.log +1 -1
- package/CHANGELOG.md +18 -0
- package/dist/tengo/tpl/main.plj.gz +0 -0
- package/package.json +4 -4
- package/src/main.tpl.tengo +20 -0
package/.turbo/turbo-build.log
CHANGED
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@@ -1,6 +1,6 @@
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WARN Issue while reading "/home/runner/work/rarefaction/rarefaction/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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> @platforma-open/milaboratories.rarefaction.workflow@1.
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> @platforma-open/milaboratories.rarefaction.workflow@1.1.1 build /home/runner/work/rarefaction/rarefaction/workflow
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> rm -rf dist && pl-tengo check && pl-tengo build
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Processing "src/main.tpl.tengo"...
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package/CHANGELOG.md
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@@ -1,5 +1,23 @@
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# @platforma-open/milaboratories.rarefaction.workflow
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## 1.1.1
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### Patch Changes
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- Updated dependencies [8c2a02a]
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- @platforma-open/milaboratories.rarefaction.software@1.2.1
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## 1.1.0
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### Minor Changes
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- 56727cb: Added extrapolation viz
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### Patch Changes
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- Updated dependencies [56727cb]
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- @platforma-open/milaboratories.rarefaction.software@1.2.0
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## 1.0.2
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### Patch Changes
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Binary file
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package/package.json
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@@ -1,15 +1,15 @@
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{
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"name": "@platforma-open/milaboratories.rarefaction.workflow",
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"version": "1.
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"version": "1.1.1",
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"type": "module",
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"description": "Block Workflow",
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"dependencies": {
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"@platforma-sdk/workflow-tengo": "^5.2.
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"@platforma-open/milaboratories.rarefaction.software": "1.1
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"@platforma-sdk/workflow-tengo": "^5.2.3",
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"@platforma-open/milaboratories.rarefaction.software": "1.2.1"
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},
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"devDependencies": {
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"@platforma-sdk/tengo-builder": "^2.2.0",
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"@platforma-sdk/test": "^1.43.
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"@platforma-sdk/test": "^1.43.16",
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"vitest": "^2.1.8"
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},
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"scripts": {
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package/src/main.tpl.tengo
CHANGED
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@@ -52,6 +52,23 @@ getSpec := func(abundanceSpec, args) {
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"pl7.app/format": ".2f"
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}
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}
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},
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{
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column: "type",
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spec: {
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name: "pl7.app/vdj/rarefaction/type",
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valueType: "String",
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domain: maps.merge(
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abundanceSpec.domain,
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{
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"pl7.app/vdj/rarefaction/numPoints": args.numPoints,
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"pl7.app/vdj/rarefaction/numIterations": args.numIterations
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}
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),
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annotations: {
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"pl7.app/label": "Type"
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}
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}
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}
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]
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}
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@@ -90,11 +107,14 @@ wf.body(func(args) {
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rarefactionCmd := exec.builder().
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software(rarefactionSw).
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mem(string(args.mem) + "GiB").
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cpu(args.cpu).
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arg(infile).
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addFile(infile, tsv).
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arg(outfile).
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arg(args.numPoints).
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arg(args.numIterations).
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arg(string(args.extrapolation)).
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saveFile(outfile).
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dontSaveStdoutOrStderr().
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cacheMinutes(24*60).
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