@platforma-open/milaboratories.mixcr-shm-trees.workflow 2.3.2 → 2.3.3

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Files changed (6) hide show
  1. package/CHANGELOG.md +6 -0
  2. package/dist/tengo/tpl/main.plj.gz +0 -0
  3. package/dist/tengo/tpl/process.plj.gz +0 -0
  4. package/dist/tengo/tpl/reconstruct-shm-trees.plj.gz +0 -0
  5. package/package.json +1 -1
  6. package/src/reconstruct-shm-trees.tpl.tengo +5 -3
package/CHANGELOG.md CHANGED
@@ -1,5 +1,11 @@
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  # @platforma-open/milaboratories.mixcr-shm-trees.workflow
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+ ## 2.3.3
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+
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+ ### Patch Changes
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+
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+ - 96a150e: Random seed added to main analysis routine
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+
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  ## 2.3.2
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  ### Patch Changes
package/dist/tengo/tpl/main.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/process.plj.gz CHANGED
Binary file
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@platforma-open/milaboratories.mixcr-shm-trees.workflow",
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- "version": "2.3.2",
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+ "version": "2.3.3",
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  "type": "module",
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  "description": "Tengo-based template",
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  "//": {
package/src/reconstruct-shm-trees.tpl.tengo CHANGED
@@ -3,6 +3,7 @@ pConstants := import("@platforma-sdk/workflow-tengo:pframes.constants")
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  ll := import("@platforma-sdk/workflow-tengo:ll")
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  assets := import("@platforma-sdk/workflow-tengo:assets")
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  exec := import("@platforma-sdk/workflow-tengo:exec")
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+ times := import("times")
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  json := import("json")
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@@ -32,11 +33,13 @@ self.body(func(inputs) {
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  ll.assert(!is_undefined(datasetTypes), "datasetTypes undefined")
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+ seed := times.time_string(times.now())
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+
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  allelesCmdBuilder := exec.builder().
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  printErrStreamToStdout().
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  secret("MI_LICENSE", "MI_LICENSE").
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  env("MI_PROGRESS_PREFIX", progressPrefix).
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- env("SEED", "1").
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+ env("SEED", seed).
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  software(mixcrSw).
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  arg("findAlleles").
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  arg("--report").arg("report.txt").
@@ -120,6 +123,7 @@ self.body(func(inputs) {
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  printErrStreamToStdout().
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  secret("MI_LICENSE", "MI_LICENSE").
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  env("MI_PROGRESS_PREFIX", progressPrefix).
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+ env("SEED", seed).
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  software(mixcrSw).
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  arg("findShmTrees").
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  arg("--report").arg("report.txt").
@@ -147,7 +151,6 @@ self.body(func(inputs) {
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  printErrStreamToStdout().
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  inLightQueue().
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  secret("MI_LICENSE", "MI_LICENSE").
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- env("MI_PROGRESS_PREFIX", progressPrefix).
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  software(mixcrSw).
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  arg("exportShmTrees")
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@@ -169,7 +172,6 @@ self.body(func(inputs) {
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  printErrStreamToStdout().
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  inLightQueue().
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  secret("MI_LICENSE", "MI_LICENSE").
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- env("MI_PROGRESS_PREFIX", progressPrefix).
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  software(mixcrSw).
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  arg("exportShmTreesWithNodes")
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