@platforma-open/milaboratories.mixcr-clonotyping-2 2.25.1 → 2.26.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/block-pack/CHANGELOG.md +10 -0
- package/block-pack/main.plj.gz +0 -0
- package/block-pack/manifest.json +1 -1
- package/block-pack/model.json +1 -1
- package/block-pack/published.json +1 -1
- package/block-pack/ui.tgz +0 -0
- package/dist/AGENTS.d.ts +1 -0
- package/dist/AGENTS.d.ts.map +1 -1
- package/dist/index.d.ts +1 -0
- package/dist/index.d.ts.map +1 -1
- package/dist/index.js +37 -14
- package/dist/index.js.map +1 -1
- package/package.json +4 -4
package/block-pack/CHANGELOG.md
CHANGED
|
@@ -1,5 +1,15 @@
|
|
|
1
1
|
# @platforma-open/milaboratories.mixcr-clonotyping
|
|
2
2
|
|
|
3
|
+
## 2.26.0
|
|
4
|
+
|
|
5
|
+
### Minor Changes
|
|
6
|
+
|
|
7
|
+
- 74e3b23: Size bulk and long-read `assemble` memory from align's clone estimate (`estimatedInitialClones`) and aligned read count instead of the .vdjca size. The estimate needs the align report of MiXCR 4.7.0-413-develop or later. UMI and single-cell presets, a global memory override, and a step override that sets more than the memory floor keep the .vdjca sizing. A step memory floor alone replaces the floor of the clone-estimate sizing, and the per-step settings show that floor for the steps it sizes.
|
|
8
|
+
|
|
9
|
+
`align` memory floor 32 → 16 GiB. The ladder measured align floors of 4 GiB or less on small inputs; the 32 GiB peaks seen on app.hz were heap fill at the old grant.
|
|
10
|
+
|
|
11
|
+
The single-cell clone export is named `mixcr exportClones cells`, apart from the bulk `mixcr exportClones`.
|
|
12
|
+
|
|
3
13
|
## 2.25.1
|
|
4
14
|
|
|
5
15
|
### Patch Changes
|
package/block-pack/main.plj.gz
CHANGED
|
Binary file
|
package/block-pack/manifest.json
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
{"schema":"v2","description":{"id":{"organization":"milaboratories","name":"mixcr-clonotyping-2","version":"2.
|
|
1
|
+
{"schema":"v2","description":{"id":{"organization":"milaboratories","name":"mixcr-clonotyping-2","version":"2.26.0"},"components":{"workflow":{"type":"workflow-v1","main":{"type":"relative","path":"main.plj.gz"}},"model":{"type":"relative","path":"model.json"},"ui":{"type":"relative","path":"ui.tgz"}},"meta":{"title":"MiXCR Clonotyping","description":"Extract TCR / BCR clonotypes from next-generation sequencing data","longDescription":{"type":"relative","path":"description.md"},"changelog":{"type":"relative","path":"CHANGELOG.md"},"logo":{"type":"relative","path":"block-logo.png"},"url":"https://github.com/platforma-open/mixcr-clonotyping-2","support":"mailto:support@milaboratories.com","tags":["upstream","airr","vdj","single-cell"],"organization":{"name":"MiLaboratories Inc","url":"https://milaboratories.com/","logo":{"type":"relative","path":"organization-logo.png"}},"marketplaceRanking":16900},"featureFlags":{"supportsLazyState":true,"supportsPframeQueryRanking":true,"requiresUIAPIVersion":3,"requiresModelAPIVersion":2,"requiresCreatePTable":2,"requiresPFramesVersion":1001031,"requiresPFrameSpec":true,"requiresPFrame":true,"requiresDialog":true,"requiresColumnsCollection":true},"kind":"@platforma-open/milaboratories.mixcr-clonotyping-2.kind@1.2.0"},"timestamp":1793614849607,"files":[{"name":"main.plj.gz","size":1575294,"sha256":"C5565A36E0A3882F13184680FD46C11565D0BE3D3249F3B3EB74E40E50195D70"},{"name":"model.json","size":583903,"sha256":"06D3AFEDCCB3ACDB47DAB65D79A252B0A5121B7B0E2CEF8A038B24A63BE33D20"},{"name":"ui.tgz","size":4067311,"sha256":"C4F79670892D2DCAD59157B13A9310533AE7FEADB18295C4A7F362D963815FFD"},{"name":"organization-logo.png","size":24439,"sha256":"FA71390C77C91E4B7FAAE5640D00F92F1E3F2869296F68B6040DD7CC549A50B5"},{"name":"description.md","size":1148,"sha256":"B319CBECC5055A89194C4D7B5768E1ABDE225053885800179439839408ECBA54"},{"name":"CHANGELOG.md","size":59166,"sha256":"8130BFB52424C5911AFCFD70E0EC34141BFB1E2F0DDC2EB1C638C0B8DC000C80"},{"name":"block-logo.png","size":21527,"sha256":"6BB33BAF0CD039549661B51AE490373BE60D1811EC71F5023400928293BC2427"}]}
|