@platforma-open/milaboratories.mixcr-clonotyping-2.workflow 3.5.2 → 3.6.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/.turbo/turbo-build.log +1 -1
- package/CHANGELOG.md +6 -0
- package/dist/tengo/tpl/aggregate-by-clonotype-key.plj.gz +0 -0
- package/dist/tengo/tpl/calculate-preset-info.plj.gz +0 -0
- package/dist/tengo/tpl/export-report.plj.gz +0 -0
- package/dist/tengo/tpl/list-presets.plj.gz +0 -0
- package/dist/tengo/tpl/main.plj.gz +0 -0
- package/dist/tengo/tpl/mixcr-analyze.plj.gz +0 -0
- package/dist/tengo/tpl/mixcr-export.plj.gz +0 -0
- package/dist/tengo/tpl/prerun.plj.gz +0 -0
- package/dist/tengo/tpl/process-single-cell.plj.gz +0 -0
- package/dist/tengo/tpl/process.plj.gz +0 -0
- package/dist/tengo/tpl/test.columns-calculate.plj.gz +0 -0
- package/dist/tengo/tpl/test.columns.test.plj.gz +0 -0
- package/package.json +1 -1
- package/src/export-report.tpl.tengo +9 -0
- package/src/process.tpl.tengo +3 -1
package/.turbo/turbo-build.log
CHANGED
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@@ -1,6 +1,6 @@
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WARN Issue while reading "/home/runner/work/mixcr-clonotyping/mixcr-clonotyping/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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-
> @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@3.
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> @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@3.6.0 build /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow
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> rm -rf dist && pl-tengo check && pl-tengo build
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info: Skipping unknown file type: test/columns.test.ts
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package/CHANGELOG.md
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package/package.json
CHANGED
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@@ -27,6 +27,8 @@ self.body(func(inputs) {
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presetSpecForBack := inputs.presetSpecForBack
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sampleIdAxisSpec := inputs.sampleIdAxisSpec
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chains := inputs.chains
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library := inputs.library
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isLibraryFileGzipped := inputs.isLibraryFileGzipped
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isSingleCell := len(presetSpecForBack.cellTags) > 0
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hasUmi := !is_undefined(presetSpecForBack.umiTags) && len(presetSpecForBack.umiTags) > 0
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@@ -64,6 +66,13 @@ self.body(func(inputs) {
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}
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exportReportCmd.arg("qc-report.tsv").saveFile("qc-report.tsv")
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if library {
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if isLibraryFileGzipped {
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exportReportCmd.addFile("library.json.gz", library)
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} else {
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exportReportCmd.addFile("library.json", library)
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}
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}
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// Run the command
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result := exportReportCmd.run()
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package/src/process.tpl.tengo
CHANGED
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@@ -694,7 +694,9 @@ self.body(func(inputs) {
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clnsData: mixcrResults.outputData("clns"),
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presetSpecForBack: presetSpecForBack,
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sampleIdAxisSpec: sampleIdAxisSpec,
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-
chains: chains
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chains: chains,
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library: library,
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isLibraryFileGzipped: isLibraryFileGzipped
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})
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return {
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