@platforma-open/milaboratories.mixcr-clonotyping-2.workflow 3.3.0 → 3.4.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (16) hide show
  1. package/.turbo/turbo-build.log +1 -1
  2. package/CHANGELOG.md +6 -0
  3. package/dist/tengo/tpl/aggregate-by-clonotype-key.plj.gz +0 -0
  4. package/dist/tengo/tpl/calculate-preset-info.plj.gz +0 -0
  5. package/dist/tengo/tpl/export-report.plj.gz +0 -0
  6. package/dist/tengo/tpl/list-presets.plj.gz +0 -0
  7. package/dist/tengo/tpl/main.plj.gz +0 -0
  8. package/dist/tengo/tpl/mixcr-analyze.plj.gz +0 -0
  9. package/dist/tengo/tpl/mixcr-export.plj.gz +0 -0
  10. package/dist/tengo/tpl/prerun.plj.gz +0 -0
  11. package/dist/tengo/tpl/process-single-cell.plj.gz +0 -0
  12. package/dist/tengo/tpl/process.plj.gz +0 -0
  13. package/dist/tengo/tpl/test.columns-calculate.plj.gz +0 -0
  14. package/dist/tengo/tpl/test.columns.test.plj.gz +0 -0
  15. package/package.json +1 -1
  16. package/src/process.tpl.tengo +2 -1
package/.turbo/turbo-build.log CHANGED
@@ -1,6 +1,6 @@
1
1
   WARN  Issue while reading "/home/runner/work/mixcr-clonotyping/mixcr-clonotyping/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
2
2
 
3
- > @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@3.3.0 build /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow
3
+ > @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@3.4.0 build /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow
4
4
  > rm -rf dist && pl-tengo check && pl-tengo build
5
5
 
6
6
  info: Skipping unknown file type: test/columns.test.ts
package/CHANGELOG.md CHANGED
@@ -1,5 +1,11 @@
1
1
  # @platforma-open/milaboratories.mixcr-clonotyping.workflow
2
2
 
3
+ ## 3.4.0
4
+
5
+ ### Minor Changes
6
+
7
+ - fdd3f2f: fix tracing for single cell
8
+
3
9
  ## 3.3.0
4
10
 
5
11
  ### Minor Changes
package/dist/tengo/tpl/export-report.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/list-presets.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/main.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/mixcr-analyze.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/mixcr-export.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/prerun.plj.gz CHANGED
Binary file
package/dist/tengo/tpl/process.plj.gz CHANGED
Binary file
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@platforma-open/milaboratories.mixcr-clonotyping-2.workflow",
3
- "version": "3.3.0",
3
+ "version": "3.4.0",
4
4
  "description": "Tengo-based template",
5
5
  "dependencies": {
6
6
  "@platforma-sdk/workflow-tengo": "^5.0.3",
package/src/process.tpl.tengo CHANGED
@@ -384,7 +384,7 @@ self.body(func(inputs) {
384
384
  exportOutputs,
385
385
  {
386
386
  // will be automatically propagated to all output specs
387
- traceSteps: [{type: "milaboratories.mixcr-clonotyping.export", id: blockId + "." + chain, importance: 80, label: chainInfo.name}],
387
+ traceSteps: isSingleCell ? [] : [{type: "milaboratories.mixcr-clonotyping.export", id: blockId + "." + chain, importance: 80, label: chainInfo.name}],
388
388
 
389
389
  // this will cache each individual step result for 30 minutes, even if execution of some of the steps
390
390
  // failed or whole execution was interrupted
@@ -647,6 +647,7 @@ self.body(func(inputs) {
647
647
  singleCellOutputs,
648
648
  {
649
649
  aggregate: ["pl7.app/sampleId"],
650
+ traceSteps: [{type: "milaboratories.mixcr-clonotyping.processSingleCell", id: blockId + "." + receptor, importance: 80, label: receptorInfo.name}],
650
651
  extra: {
651
652
  byCellTagB: byCellTagBData,
652
653
  propertiesA: perChainResults[chainA].clonotypeProperties.data,