@platforma-open/milaboratories.mixcr-clonotyping-2.workflow 3.0.4 → 3.1.0

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Files changed (23) hide show
  1. package/.turbo/turbo-build.log +5 -1
  2. package/CHANGELOG.md +6 -0
  3. package/dist/index.d.ts +1 -1
  4. package/dist/index.js +1 -0
  5. package/dist/index.mjs +1 -0
  6. package/dist/tengo/lib/qc-report-columns.lib.tengo +1293 -0
  7. package/dist/tengo/tpl/aggregate-by-clonotype-key.plj.gz +0 -0
  8. package/dist/tengo/tpl/calculate-preset-info.plj.gz +0 -0
  9. package/dist/tengo/tpl/export-report.plj.gz +0 -0
  10. package/dist/tengo/tpl/list-presets.plj.gz +0 -0
  11. package/dist/tengo/tpl/main.plj.gz +0 -0
  12. package/dist/tengo/tpl/mixcr-analyze.plj.gz +0 -0
  13. package/dist/tengo/tpl/mixcr-export.plj.gz +0 -0
  14. package/dist/tengo/tpl/prerun.plj.gz +0 -0
  15. package/dist/tengo/tpl/process-single-cell.plj.gz +0 -0
  16. package/dist/tengo/tpl/process.plj.gz +0 -0
  17. package/dist/tengo/tpl/test.columns-calculate.plj.gz +0 -0
  18. package/dist/tengo/tpl/test.columns.test.plj.gz +0 -0
  19. package/package.json +2 -2
  20. package/src/export-report.tpl.tengo +115 -0
  21. package/src/main.tpl.tengo +5 -0
  22. package/src/process.tpl.tengo +13 -3
  23. package/src/qc-report-columns.lib.tengo +1293 -0
package/.turbo/turbo-build.log CHANGED
@@ -1,6 +1,6 @@
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   WARN  Issue while reading "/home/runner/work/mixcr-clonotyping/mixcr-clonotyping/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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- > @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@3.0.4 build /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow
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+ > @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@3.1.0 build /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow
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  > rm -rf dist && pl-tengo check && pl-tengo build
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  info: Skipping unknown file type: test/columns.test.ts
@@ -8,6 +8,7 @@ Processing "src/aggregate-by-clonotype-key.tpl.tengo"...
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  Processing "src/calculate-export-specs.lib.tengo"...
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  Processing "src/calculate-preset-info.tpl.tengo"...
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  Processing "src/clonotype-label.lib.tengo"...
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+ Processing "src/export-report.tpl.tengo"...
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  Processing "src/list-presets.tpl.tengo"...
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  Processing "src/main.tpl.tengo"...
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  Processing "src/mixcr-analyze.tpl.tengo"...
@@ -15,6 +16,7 @@ Processing "src/mixcr-export.tpl.tengo"...
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  Processing "src/prerun.tpl.tengo"...
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  Processing "src/process-single-cell.tpl.tengo"...
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  Processing "src/process.tpl.tengo"...
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+ Processing "src/qc-report-columns.lib.tengo"...
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  Processing "src/test/columns-calculate.tpl.tengo"...
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  Processing "src/test/columns.test.tpl.tengo"...
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  No syntax errors found.
@@ -22,8 +24,10 @@ No syntax errors found.
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  info: Compiling 'dist'...
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  info: - writing /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow/dist/tengo/lib/calculate-export-specs.lib.tengo
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  info: - writing /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow/dist/tengo/lib/clonotype-label.lib.tengo
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+ info: - writing /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow/dist/tengo/lib/qc-report-columns.lib.tengo
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  info: - writing /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow/dist/tengo/tpl/aggregate-by-clonotype-key.plj.gz
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  info: - writing /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow/dist/tengo/tpl/calculate-preset-info.plj.gz
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+ info: - writing /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow/dist/tengo/tpl/export-report.plj.gz
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  info: - writing /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow/dist/tengo/tpl/list-presets.plj.gz
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  info: - writing /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow/dist/tengo/tpl/mixcr-analyze.plj.gz
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  info: - writing /home/runner/work/mixcr-clonotyping/mixcr-clonotyping/workflow/dist/tengo/tpl/mixcr-export.plj.gz
package/CHANGELOG.md CHANGED
@@ -1,5 +1,11 @@
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  # @platforma-open/milaboratories.mixcr-clonotyping.workflow
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+ ## 3.1.0
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+
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+ ### Minor Changes
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+
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+ - 78e7e7b: New section with QC report table
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+
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  ## 3.0.4
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  ### Patch Changes
package/dist/index.d.ts CHANGED
@@ -1,4 +1,4 @@
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  declare type TemplateFromFile = { readonly type: "from-file"; readonly path: string; };
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- declare type TplName = "aggregate-by-clonotype-key" | "calculate-preset-info" | "list-presets" | "mixcr-analyze" | "mixcr-export" | "prerun" | "process-single-cell" | "process" | "test.columns-calculate" | "test.columns.test" | "main";
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+ declare type TplName = "aggregate-by-clonotype-key" | "calculate-preset-info" | "export-report" | "list-presets" | "mixcr-analyze" | "mixcr-export" | "prerun" | "process-single-cell" | "process" | "test.columns-calculate" | "test.columns.test" | "main";
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  declare const Templates: Record<TplName, TemplateFromFile>;
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  export { Templates };
package/dist/index.js CHANGED
@@ -1,6 +1,7 @@
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  module.exports = { Templates: {
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  'aggregate-by-clonotype-key': { type: 'from-file', path: require.resolve('./tengo/tpl/aggregate-by-clonotype-key.plj.gz') },
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  'calculate-preset-info': { type: 'from-file', path: require.resolve('./tengo/tpl/calculate-preset-info.plj.gz') },
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+ 'export-report': { type: 'from-file', path: require.resolve('./tengo/tpl/export-report.plj.gz') },
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  'list-presets': { type: 'from-file', path: require.resolve('./tengo/tpl/list-presets.plj.gz') },
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  'mixcr-analyze': { type: 'from-file', path: require.resolve('./tengo/tpl/mixcr-analyze.plj.gz') },
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  'mixcr-export': { type: 'from-file', path: require.resolve('./tengo/tpl/mixcr-export.plj.gz') },
package/dist/index.mjs CHANGED
@@ -2,6 +2,7 @@ import { resolve } from 'node:path';
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  export const Templates = {
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  'aggregate-by-clonotype-key': { type: 'from-file', path: resolve(import.meta.dirname, './tengo/tpl/aggregate-by-clonotype-key.plj.gz') },
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  'calculate-preset-info': { type: 'from-file', path: resolve(import.meta.dirname, './tengo/tpl/calculate-preset-info.plj.gz') },
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+ 'export-report': { type: 'from-file', path: resolve(import.meta.dirname, './tengo/tpl/export-report.plj.gz') },
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  'list-presets': { type: 'from-file', path: resolve(import.meta.dirname, './tengo/tpl/list-presets.plj.gz') },
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  'mixcr-analyze': { type: 'from-file', path: resolve(import.meta.dirname, './tengo/tpl/mixcr-analyze.plj.gz') },
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  'mixcr-export': { type: 'from-file', path: resolve(import.meta.dirname, './tengo/tpl/mixcr-export.plj.gz') },