@platforma-open/milaboratories.mixcr-clonotyping-2.workflow 2.4.0 → 2.4.1

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Files changed (16) hide show
  1. package/.turbo/turbo-build.log +1 -1
  2. package/.turbo/turbo-test.log +10 -10
  3. package/CHANGELOG.md +6 -0
  4. package/dist/tengo/tpl/aggregate-by-clonotype-key.plj.gz +0 -0
  5. package/dist/tengo/tpl/calculate-preset-info.plj.gz +0 -0
  6. package/dist/tengo/tpl/list-presets.plj.gz +0 -0
  7. package/dist/tengo/tpl/main.plj.gz +0 -0
  8. package/dist/tengo/tpl/mixcr-analyze.plj.gz +0 -0
  9. package/dist/tengo/tpl/mixcr-export.plj.gz +0 -0
  10. package/dist/tengo/tpl/prerun.plj.gz +0 -0
  11. package/dist/tengo/tpl/process-single-cell.plj.gz +0 -0
  12. package/dist/tengo/tpl/process.plj.gz +0 -0
  13. package/dist/tengo/tpl/test.columns-calculate.plj.gz +0 -0
  14. package/dist/tengo/tpl/test.columns.test.plj.gz +0 -0
  15. package/package.json +1 -1
  16. package/src/main.tpl.tengo +2 -2
package/.turbo/turbo-build.log CHANGED
@@ -1,6 +1,6 @@
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   WARN  Issue while reading "/home/runner/work/mixcr-clonotyping-2/mixcr-clonotyping-2/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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- > @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@2.4.0 build /home/runner/work/mixcr-clonotyping-2/mixcr-clonotyping-2/workflow
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+ > @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@2.4.1 build /home/runner/work/mixcr-clonotyping-2/mixcr-clonotyping-2/workflow
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  > rm -rf dist && pl-tengo check && pl-tengo build
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  info: Skipping unknown file type: test/columns.test.ts
package/.turbo/turbo-test.log CHANGED
@@ -1,21 +1,21 @@
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   WARN  Issue while reading "/home/runner/work/mixcr-clonotyping-2/mixcr-clonotyping-2/.npmrc". Failed to replace env in config: ${NPMJS_TOKEN}
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- > @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@2.4.0 test /home/runner/work/mixcr-clonotyping-2/mixcr-clonotyping-2/workflow
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+ > @platforma-open/milaboratories.mixcr-clonotyping-2.workflow@2.4.1 test /home/runner/work/mixcr-clonotyping-2/mixcr-clonotyping-2/workflow
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  > vitest
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   RUN  v2.1.8 /home/runner/work/mixcr-clonotyping-2/mixcr-clonotyping-2/workflow
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- ✓ src/test/columns.test.ts (6 tests) 53559ms
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- ✓ checking preset for 'milab-human-dna-xcr-7genes-multiplex' 12593ms
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- ✓ checking preset for '10x-sc-xcr-vdj' 8579ms
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- ✓ checking preset for 'cellecta-human-rna-xcr-umi-drivermap-…' 8248ms
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- ✓ checking preset for 'takara-human-rna-bcr-umi-smartseq' 8275ms
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- ✓ checking preset for 'rna-seq' 7833ms
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- ✓ checking preset for 'generic-single-cell-gex' 8029ms
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+ ✓ src/test/columns.test.ts (6 tests) 53502ms
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+ ✓ checking preset for 'milab-human-dna-xcr-7genes-multiplex' 13417ms
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+ ✓ checking preset for '10x-sc-xcr-vdj' 8367ms
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+ ✓ checking preset for 'cellecta-human-rna-xcr-umi-drivermap-…' 8046ms
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+ ✓ checking preset for 'takara-human-rna-bcr-umi-smartseq' 8241ms
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+ ✓ checking preset for 'rna-seq' 7618ms
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+ ✓ checking preset for 'generic-single-cell-gex' 7812ms
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   Test Files  1 passed (1)
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   Tests  6 passed (6)
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-  Start at  07:35:16
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-  Duration  54.39s (transform 48ms, setup 0ms, collect 581ms, tests 53.56s, environment 0ms, prepare 65ms)
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+  Start at  17:05:40
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+  Duration  54.41s (transform 56ms, setup 0ms, collect 641ms, tests 53.50s, environment 0ms, prepare 74ms)
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package/CHANGELOG.md CHANGED
@@ -1,5 +1,11 @@
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  # @platforma-open/milaboratories.mixcr-clonotyping.workflow
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+ ## 2.4.1
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+
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+ ### Patch Changes
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+
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+ - cd6367a: Added UI control to select receptor or chain
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+
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  ## 2.4.0
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  ### Minor Changes
package/dist/tengo/tpl/list-presets.plj.gz CHANGED
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package/dist/tengo/tpl/main.plj.gz CHANGED
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package/dist/tengo/tpl/mixcr-analyze.plj.gz CHANGED
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package/dist/tengo/tpl/mixcr-export.plj.gz CHANGED
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package/dist/tengo/tpl/prerun.plj.gz CHANGED
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package/dist/tengo/tpl/process.plj.gz CHANGED
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package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@platforma-open/milaboratories.mixcr-clonotyping-2.workflow",
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- "version": "2.4.0",
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+ "version": "2.4.1",
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  "description": "Tengo-based template",
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  "dependencies": {
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  "@platforma-sdk/workflow-tengo": "^3.1.0",
package/src/main.tpl.tengo CHANGED
@@ -88,9 +88,9 @@ wf.body(func(args) {
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  presetSpecForBack := presetInfoResult.output("presetSpecForBack", 24 * 60 * 60 * 1000)
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  // calculating chains
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- // chains := ["IGHeavy", "IGLight", "TRAlpha", "TRBeta", "TRGamma", "TRDelta"]
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+ // chains := ["IGHeavy", "IGLight", "TCRAlpha", "TCRBeta", "TCRGamma", "TCRDelta"]
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  //receptorsOrChains := ["IG", "TCRAB", "TCRGD"]
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- receptorsOrChains := ["IG"]
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+ receptorsOrChains := ["IG", "TCRAB", "TCRGD"]
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  if !is_undefined(args.chains) {
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  receptorsOrChains = args.chains
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  }